>EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear antigen 3)|
           (EBNA-3) (EBNA-3A)
          Length = 812

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 199 QIHYPPLERFLASGQAYPSQIHRQICFHPCPCSQPP 306
           Q+  PP     A G AYP  +H Q    PCP +Q P
Sbjct: 310 QVPEPPTIHLAAQGMAYP--LHEQHGMAPCPVAQAP 343

>GLU2_MAIZE (P04706) Glutelin-2 precursor (Zein-gamma) (27 kDa zein)|
           (Alcohol-soluble reduced glutelin) (ASG) (Zein ZC2)
          Length = 223

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
 Frame = +1

Query: 202 IHYPPLERFLASGQAYPSQIHRQICF---HPCPCSQPP*ASGCCCL*LNHPSSC 354
           +H PP          YP+Q  R       HPCPC QP            HPS C
Sbjct: 70  VHVPPPVHLPPPPCHYPTQPPRPQPHPQPHPCPCQQP------------HPSPC 111

>RBFA_DEIRA (Q9RVX0) Ribosome-binding factor A|
          Length = 128

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -1

Query: 108 ARGRLQLERSAEGRLKLKPTVNF 40
           ARGRLQ E SA  R++  PT+ F
Sbjct: 90  ARGRLQRELSAHVRMRRTPTLEF 112

>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42|
          Length = 723

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 250 PSQIHRQICFHPCPCSQPP*ASGCCCL*LNHPS 348
           P +  R   F  C CS+ P    CCC   N P+
Sbjct: 43  PYKDERNCQFCHCTCSESPNCHWCCCSWANDPN 75

>NIFQ_RHOCA (P20629) Protein nifQ|
          Length = 180

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 194 RSRSTTHHWSAFWLPARPTLHRSIARF 274
           RS  T H W    LP+RP L   IA F
Sbjct: 105 RSMETRHLWEDLGLPSRPWLSGMIAHF 131

>DNAA_BARQU (Q6G0V6) Chromosomal replication initiator protein dnaA|
          Length = 494

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 102 GRLQLERSAEGRLKLKPTVNFPRKWARSHHGTVV 1
           GRL+L   +   +KL     F R W  +H+G+++
Sbjct: 49  GRLKLAEYSRNLVKLSVPTAFLRSWINNHYGSLL 82

>DNAA_BARHE (Q6G526) Chromosomal replication initiator protein dnaA|
          Length = 494

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 102 GRLQLERSAEGRLKLKPTVNFPRKWARSHHGTVV 1
           GRL+L   +   +KL     F R W  +H+G+++
Sbjct: 49  GRLKLAEYSRNLVKLSVPTAFLRSWINNHYGSLL 82

>CRDL2_MOUSE (Q8VEA6) Chordin-like protein 2 precursor|
          Length = 426

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 262 HRQICFHPCPCSQPP*ASGCCC 327
           HR  C    PCSQP   +G CC
Sbjct: 286 HRVTCPTQYPCSQPKKVAGKCC 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,562,158
Number of Sequences: 219361
Number of extensions: 416596
Number of successful extensions: 1032
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)