>ref|XM_473064.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2541

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 65   agccttccttctgcgcttctttccagt 91
            |||||||||||||||||||||||||||
Sbjct: 2532 agccttccttctgcgcttctttccagt 2506

>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
              complete sequence
          Length = 173171

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 65     agccttccttctgcgcttctttccagt 91
              |||||||||||||||||||||||||||
Sbjct: 135105 agccttccttctgcgcttctttccagt 135131

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 65       agccttccttctgcgcttctttccagt 91
                |||||||||||||||||||||||||||
Sbjct: 25014520 agccttccttctgcgcttctttccagt 25014546

>dbj|AB117993.1| Oryza sativa (japonica cultivar-group) bip106 mRNA for BRI1-KD
           interacting protein 106, partial cds
          Length = 709

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 65  agccttccttctgcgcttctttccagt 91
           |||||||||||||||||||||||||||
Sbjct: 700 agccttccttctgcgcttctttccagt 674

>dbj|AK068884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E10, full
            insert sequence
          Length = 2250

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 65   agccttccttctgcgcttctttccagt 91
            |||||||||||||||||||||||||||
Sbjct: 1887 agccttccttctgcgcttctttccagt 1861

>dbj|AK068612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D11, full
            insert sequence
          Length = 3038

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 65   agccttccttctgcgcttctttccagt 91
            |||||||||||||||||||||||||||
Sbjct: 2685 agccttccttctgcgcttctttccagt 2659

>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
              sequence
          Length = 148644

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 65     agccttccttctgcgcttctttccagt 91
              |||||||||||||||||||||||||||
Sbjct: 142757 agccttccttctgcgcttctttccagt 142783

>ref|XM_466696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2870

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 64   aagccttccttctgcgcttctttcc 88
            |||||||||||||||||||||||||
Sbjct: 2529 aagccttccttctgcgcttctttcc 2505



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 64   aagccttccttctgcgcttcttt 86
            |||||||||||||||||||||||
Sbjct: 2589 aagccttccttctgcgcttcttt 2567

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 64       aagccttccttctgcgcttctttcc 88
                |||||||||||||||||||||||||
Sbjct: 24159656 aagccttccttctgcgcttctttcc 24159680



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 64       aagccttccttctgcgcttcttt 86
                |||||||||||||||||||||||
Sbjct: 24159596 aagccttccttctgcgcttcttt 24159618

>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 64     aagccttccttctgcgcttctttcc 88
              |||||||||||||||||||||||||
Sbjct: 118397 aagccttccttctgcgcttctttcc 118421



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 64     aagccttccttctgcgcttcttt 86
              |||||||||||||||||||||||
Sbjct: 118337 aagccttccttctgcgcttcttt 118359

>dbj|AB118021.1| Oryza sativa (japonica cultivar-group) bip135 mRNA for BRI1-KD
            interacting protein 135, partial cds
          Length = 1850

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 64   aagccttccttctgcgcttctttcc 88
            |||||||||||||||||||||||||
Sbjct: 1481 aagccttccttctgcgcttctttcc 1457



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 64   aagccttccttctgcgcttcttt 86
            |||||||||||||||||||||||
Sbjct: 1541 aagccttccttctgcgcttcttt 1519

>dbj|AK072455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I24, full
            insert sequence
          Length = 2870

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 64   aagccttccttctgcgcttctttcc 88
            |||||||||||||||||||||||||
Sbjct: 2529 aagccttccttctgcgcttctttcc 2505



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 64   aagccttccttctgcgcttcttt 86
            |||||||||||||||||||||||
Sbjct: 2589 aagccttccttctgcgcttcttt 2567

>gb|AY104489.1| Zea mays PCO108349 mRNA sequence
          Length = 553

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 64  aagccttccttctgcgcttctttcc 88
           |||||||||||||||||||||||||
Sbjct: 197 aagccttccttctgcgcttctttcc 173

>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 77    gcgcttctttccagttgaagac 98
             ||||||||||||||||||||||
Sbjct: 56117 gcgcttctttccagttgaagac 56096

>gb|AC124306.4| Homo sapiens chromosome 15, clone RP11-275I4, complete sequence
          Length = 160846

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 324   ctgtctttagctaaatcatccttcatctt 352
             ||||||| ||||||| |||||||||||||
Sbjct: 84233 ctgtcttcagctaaaacatccttcatctt 84205

>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence
          Length = 137391

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   ttttccttgacttccttctt 394
             ||||||||||||||||||||
Sbjct: 16310 ttttccttgacttccttctt 16329

>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence
          Length = 170731

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 375    ttttccttgacttccttctt 394
              ||||||||||||||||||||
Sbjct: 147965 ttttccttgacttccttctt 147984

>ref|XM_323154.1| Neurospora crassa OR74A hypothetical protein (NCU10036.1) partial
            mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  tttttccttgacttccttct 393
            ||||||||||||||||||||
Sbjct: 1584 tttttccttgacttccttct 1565

>ref|XM_952880.1| Neurospora crassa OR74A hypothetical protein (NCU10036.1) partial
            mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 374  tttttccttgacttccttct 393
            ||||||||||||||||||||
Sbjct: 1584 tttttccttgacttccttct 1565

>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence
          Length = 185210

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    atccttgcccttgctcccaa 300
              ||||||||||||||||||||
Sbjct: 127701 atccttgcccttgctcccaa 127682

>emb|AL591742.7| Human DNA sequence from clone RP4-590F24 on chromosome 1 Contains the
             3' end of the gene for HNOEL-iso protein (HNOEL-iso) and a
             ribosomal protein L13a (RPL13A) pseudogene, complete
             sequence
          Length = 86049

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   aagcttctggttgctgctgt 327
             ||||||||||||||||||||
Sbjct: 80877 aagcttctggttgctgctgt 80896

>emb|CR859018.1| Pongo pygmaeus mRNA; cDNA DKFZp469H151 (from clone DKFZp469H151)
          Length = 2403

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 67  ccttccttctgcgcttcttt 86
           ||||||||||||||||||||
Sbjct: 503 ccttccttctgcgcttcttt 484

>gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complete sequence
          Length = 145706

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     ccttccttctgcgcttcttt 86
              ||||||||||||||||||||
Sbjct: 134533 ccttccttctgcgcttcttt 134552

>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    agccttccttctgcgcttct 84
             ||||||||||||||||||||
Sbjct: 45167 agccttccttctgcgcttct 45148

>dbj|AP006435.1| Sus scrofa  CC chemokine receptor genes (CCR3, CCR2, CCR5, CCRL2, LTF),
             complete and partial cds, clone: 0479G08
          Length = 144233

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   ttccatccttgcccttgctc 296
             ||||||||||||||||||||
Sbjct: 80463 ttccatccttgcccttgctc 80444

>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7,
             LRRC2), complete cds, clone: 0475A03
          Length = 165558

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   ttccatccttgcccttgctc 296
             ||||||||||||||||||||
Sbjct: 11858 ttccatccttgcccttgctc 11839

>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence
          Length = 176948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   agatgcctcctgctccattt 129
             ||||||||||||||||||||
Sbjct: 12165 agatgcctcctgctccattt 12184

>gb|AC124474.4| Mus musculus BAC clone RP24-88C10 from 1, complete sequence
          Length = 225413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 274    tgcttccatccttgcccttg 293
              ||||||||||||||||||||
Sbjct: 137460 tgcttccatccttgcccttg 137441

>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 79      gcttctttccagttgaagac 98
               ||||||||||||||||||||
Sbjct: 1616645 gcttctttccagttgaagac 1616626

>gb|AC165416.12| Mus musculus chromosome 3, clone RP23-86I19, complete sequence
          Length = 130155

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   agatgcctcctgctccattt 129
             ||||||||||||||||||||
Sbjct: 76469 agatgcctcctgctccattt 76488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,883,207
Number of Sequences: 3902068
Number of extensions: 2883207
Number of successful extensions: 51867
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51780
Number of HSP's gapped (non-prelim): 87
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)