ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20p14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL133355.13| Human DNA sequence from clone RP11-541N10 on ch... 50 0.010
2gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's ... 44 0.60
3emb|CR388368.8| Zebrafish DNA sequence from clone DKEY-21E5 in l... 44 0.60
4emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in l... 44 0.60
5gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complet... 44 0.60
6emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in l... 44 0.60
7emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in ... 44 0.60
8emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in... 44 0.60
9emb|Z75203.1|SCYOR295W S.cerevisiae chromosome XV reading frame ... 44 0.60
10gb|DQ331504.1| Synthetic construct Saccharomyces cerevisiae clon... 44 0.60
11ref|XM_638844.1| Dictyostelium discoideum hypothetical protein (... 42 2.4
12ref|XM_467662.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.4
13emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on ... 42 2.4
14gb|AC018946.12| Homo sapiens chromosome 15, clone RP11-154B12, c... 42 2.4
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
16gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 42 2.4
17dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
18dbj|AK120606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
19gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence 42 2.4
20ref|NM_125772.3| Arabidopsis thaliana diacylglycerol kinase AT5G... 40 9.4
21gb|AC151760.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 9.4
22gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
23gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complet... 40 9.4
24gb|AY380783.1| Arabidopsis thaliana diacylglycerol kinase 2 (At5... 40 9.4
25gb|AC115605.2| Dictyostelium discoideum chromosome 2 map 5817431... 40 9.4
26emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on... 40 9.4
27gb|BT008792.1| Arabidopsis thaliana At5g63770 gene, complete cds 40 9.4
28gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, co... 40 9.4
29gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome... 40 9.4
30emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 i... 40 9.4
31gb|AC121312.7| Mus musculus chromosome 3, clone RP24-343J5, comp... 40 9.4
32emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 i... 40 9.4
33gb|AC020629.6| Homo sapiens 12q BAC RP11-76E16 (Roswell Park Can... 40 9.4
34gb|DQ400408.1| Oncorhynchus mykiss microsatellite OMM3103 sequence 40 9.4
35gb|AY062655.1| Arabidopsis thaliana diacylglycerol kinase (At5g6... 40 9.4
36gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chrom... 40 9.4
37dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
38gb|AC093719.26| Homo sapiens 12 BAC RP11-549I9 (Roswell Park Can... 40 9.4
39emb|BX830838.1|CNS09YQH Arabidopsis thaliana Full-length cDNA Co... 40 9.4
40gb|AC154704.2| Mus musculus BAC clone RP24-349I24 from chromosom... 40 9.4
41gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, com... 40 9.4
42emb|BX571831.7| Zebrafish DNA sequence from clone DKEY-266J11 in... 40 9.4
43emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in... 40 9.4
44emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chr... 40 9.4
45dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.4
46gb|AC123939.5| Mus musculus BAC clone RP23-418I14 from 12, compl... 40 9.4
47emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 i... 40 9.4
48emb|BX927187.7| Zebrafish DNA sequence from clone DKEY-44L17 in ... 40 9.4
49emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 ... 40 9.4
50emb|BX296520.9| Zebrafish DNA sequence from clone RP71-4M17 in l... 40 9.4
51gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 ... 40 9.4
52gb|U33842.1|MMU33842 Mus musculus TNF-stimulated gene-14 (TSG-14... 40 9.4
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.4
54emb|BX936386.9| Zebrafish DNA sequence from clone CH211-232P21 i... 40 9.4 
>emb|AL133355.13| Human DNA sequence from clone RP11-541N10 on chromosome 10 Contains the
              5' end of the SH3MD1 gene for SH3 multiple domains 1, a
              novel gene and two CpG islands, complete sequence
          Length = 190882

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 20     atttacataaatggatcgatttttctataaata 52
              |||||||||||||||||||| |||| |||||||
Sbjct: 101696 atttacataaatggatcgatatttccataaata 101728
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>gb|AC129162.5| Rattus norvegicus 9 BAC CH230-108L13 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 245677

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 128    gcataaaacacacataggagaa 149
              ||||||||||||||||||||||
Sbjct: 130749 gcataaaacacacataggagaa 130770
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>emb|CR388368.8| Zebrafish DNA sequence from clone DKEY-21E5 in linkage group 5,
             complete sequence
          Length = 85762

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 543   atcttccaatcatataagccct 564
             ||||||||||||||||||||||
Sbjct: 50126 atcttccaatcatataagccct 50105
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>emb|BX276106.6| Zebrafish DNA sequence from clone DKEY-1N18 in linkage group 6, complete
              sequence
          Length = 220671

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 543    atcttccaatcatataagccct 564
              ||||||||||||||||||||||
Sbjct: 173451 atcttccaatcatataagccct 173472
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>gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complete sequence
          Length = 163114

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 512   ataaagtgggtatagagctgct 533
             ||||||||||||||||||||||
Sbjct: 68713 ataaagtgggtatagagctgct 68692
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>emb|BX119965.9| Zebrafish DNA sequence from clone RP71-86I6 in linkage group 14,
             complete sequence
          Length = 135252

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 543   atcttccaatcatataagccct 564
             ||||||||||||||||||||||
Sbjct: 39844 atcttccaatcatataagccct 39823
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>emb|CR388170.5| Zebrafish DNA sequence from clone CH211-87E4 in linkage group 20,
             complete sequence
          Length = 174079

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 543   atcttccaatcatataagccct 564
             ||||||||||||||||||||||
Sbjct: 10471 atcttccaatcatataagccct 10492
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>emb|BX276086.4| Zebrafish DNA sequence from clone CH211-114C9 in linkage group 20,
              complete sequence
          Length = 172431

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 543    atcttccaatcatataagccct 564
              ||||||||||||||||||||||
Sbjct: 164691 atcttccaatcatataagccct 164670
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>emb|Z75203.1|SCYOR295W S.cerevisiae chromosome XV reading frame ORF YOR295w
          Length = 1250

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 agtcatatgacagagcctaaaa 125
           ||||||||||||||||||||||
Sbjct: 827 agtcatatgacagagcctaaaa 848
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>gb|DQ331504.1| Synthetic construct Saccharomyces cerevisiae clone FLH148928.01X
           UAF30 gene, complete sequence
          Length = 687

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 agtcatatgacagagcctaaaa 125
           ||||||||||||||||||||||
Sbjct: 571 agtcatatgacagagcctaaaa 592
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>ref|XM_638844.1| Dictyostelium discoideum hypothetical protein (DDB0203300), partial
            mRNA
          Length = 1551

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 323  atcaaaaccagcagcagccat 343
            |||||||||||||||||||||
Sbjct: 1329 atcaaaaccagcagcagccat 1309
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>ref|XM_467662.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1702

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 240  aaaagctgtgctcttttcttccccgaaagatga 272
            |||||||||||||||||||| | |||| |||||
Sbjct: 1342 aaaagctgtgctcttttcttactcgaaggatga 1310



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 319  gtggatcaaaaccagcagcagccattagcagcattcccatgtgatctgcctctatctccg 378
            |||||||  ||||||||||| | | || |||||  || || |||||||||||||||||| 
Sbjct: 1236 gtggatcgtaaccagcagcaccaagtaccagcagcccaatatgatctgcctctatctcca 1177

                
Query: 379  tcct 382
            ||||
Sbjct: 1176 tcct 1173
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>emb|AL034349.3|HS86D1 Human DNA sequence from clone RP1-86D1 on chromosome 6q22.2-23.1
             Contains two novel genes and the 5' end of the PTPRK gene
             for protein tyrosine phosphatase, receptor type K
             (R-PTP-KAPPA) and a CpG island, complete sequence
          Length = 112604

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 438   aatgtaaacttactcaattca 458
             |||||||||||||||||||||
Sbjct: 21216 aatgtaaacttactcaattca 21236
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>gb|AC018946.12| Homo sapiens chromosome 15, clone RP11-154B12, complete sequence
          Length = 173701

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 467    taccttagaaatgtatctgtt 487
              |||||||||||||||||||||
Sbjct: 139845 taccttagaaatgtatctgtt 139865
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 240      aaaagctgtgctcttttcttccccgaaagatga 272
                |||||||||||||||||||| | |||| |||||
Sbjct: 30690994 aaaagctgtgctcttttcttactcgaaggatga 30690962



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                            
Query: 319      gtggatcaaaaccagcagcagccattagcagcattcccatgtgatctgcctctatctccg 378
                |||||||  ||||||||||| | | || |||||  || || |||||||||||||||||| 
Sbjct: 30690888 gtggatcgtaaccagcagcaccaagtaccagcagcccaatatgatctgcctctatctcca 30690829

                         
Query: 379      tcctacata 387
                |||| ||||
Sbjct: 30690828 tcctgcata 30690820
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    atcaaaaccagcagcagccat 343
              |||||||||||||||||||||
Sbjct: 176417 atcaaaaccagcagcagccat 176397
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>dbj|AP004880.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0487D09
          Length = 161531

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 240   aaaagctgtgctcttttcttccccgaaagatga 272
             |||||||||||||||||||| | |||| |||||
Sbjct: 31141 aaaagctgtgctcttttcttactcgaaggatga 31109



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 57/69 (82%)
 Strand = Plus / Minus

                                                                         
Query: 319   gtggatcaaaaccagcagcagccattagcagcattcccatgtgatctgcctctatctccg 378
             |||||||  ||||||||||| | | || |||||  || || |||||||||||||||||| 
Sbjct: 31035 gtggatcgtaaccagcagcaccaagtaccagcagcccaatatgatctgcctctatctcca 30976

                      
Query: 379   tcctacata 387
             |||| ||||
Sbjct: 30975 tcctgcata 30967
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>dbj|AK120606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151A19, full
            insert sequence
          Length = 1702

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 240  aaaagctgtgctcttttcttccccgaaagatga 272
            |||||||||||||||||||| | |||| |||||
Sbjct: 1342 aaaagctgtgctcttttcttactcgaaggatga 1310



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 319  gtggatcaaaaccagcagcagccattagcagcattcccatgtgatctgcctctatctccg 378
            |||||||  ||||||||||| | | || |||||  || || |||||||||||||||||| 
Sbjct: 1236 gtggatcgtaaccagcagcaccaagtaccagcagcccaatatgatctgcctctatctcca 1177

                
Query: 379  tcct 382
            ||||
Sbjct: 1176 tcct 1173
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>gb|AC007159.4|AC007159 Homo sapiens, clone 2_A_4, complete sequence
          Length = 155021

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 418   aatatttgcataggtttgataatgtaaac 446
             ||||||||||||||| | |||||||||||
Sbjct: 58152 aatatttgcataggtataataatgtaaac 58180
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>ref|NM_125772.3| Arabidopsis thaliana diacylglycerol kinase AT5G63770 mRNA, complete
           cds
          Length = 2858

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atgccctcgtatagatgcta 20
           ||||||||||||||||||||
Sbjct: 968 atgccctcgtatagatgcta 949
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>gb|AC151760.1| Ornithorhynchus anatinus chromosome UNK clone OABb-456A1, complete
             sequence
          Length = 142934

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   aagatgatatatgtcattcc 285
             ||||||||||||||||||||
Sbjct: 79505 aagatgatatatgtcattcc 79486
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>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0019E05, complete sequence
          Length = 129021

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gctgctgggcaactcatctt 547
             ||||||||||||||||||||
Sbjct: 96423 gctgctgggcaactcatctt 96442
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>gb|AC011761.15| Drosophila melanogaster clone BACH50G05, complete sequence
          Length = 108727

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   agaaatgtatctgttggaat 492
             ||||||||||||||||||||
Sbjct: 77946 agaaatgtatctgttggaat 77927
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>gb|AY380783.1| Arabidopsis thaliana diacylglycerol kinase 2 (At5g63770) mRNA,
           complete cds
          Length = 2139

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atgccctcgtatagatgcta 20
           ||||||||||||||||||||
Sbjct: 744 atgccctcgtatagatgcta 725
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>gb|AC115605.2| Dictyostelium discoideum chromosome 2 map 5817431-5836155 strain AX4,
            complete sequence
          Length = 18724

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 491  attaaaacagtttaaaaaggaata 514
            ||||||||| ||||||||||||||
Sbjct: 4346 attaaaacaatttaaaaaggaata 4323
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>emb|AL080315.18|HSDJ6P5 Human DNA sequence from clone RP1-6P5 on chromosome 6 Contains a
             eukaryotic translation elongation factor 1 delta (guanine
             nucleotide exchange protein) (EEF1D) pseudogene and a
             ribosomal protein L21 (RPL21) pseudogene, complete
             sequence
          Length = 158980

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 493   taaaacagtttaaaaaggaataaa 516
             ||||| ||||||||||||||||||
Sbjct: 61026 taaaaaagtttaaaaaggaataaa 61049
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>gb|BT008792.1| Arabidopsis thaliana At5g63770 gene, complete cds
          Length = 2139

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atgccctcgtatagatgcta 20
           ||||||||||||||||||||
Sbjct: 744 atgccctcgtatagatgcta 725
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>gb|AC116715.22| Mus musculus chromosome 5, clone RP23-129N14, complete sequence
          Length = 193245

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tgcaggcctggtgccttgga 184
             ||||||||||||||||||||
Sbjct: 44050 tgcaggcctggtgccttgga 44069
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>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence
          Length = 226483

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    tatctgttggaattaaaaca 499
              ||||||||||||||||||||
Sbjct: 199427 tatctgttggaattaaaaca 199408
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>emb|CR356236.12| Zebrafish DNA sequence from clone CH211-251P4 in linkage group 13,
             complete sequence
          Length = 171465

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   cttccaatcatataagccct 564
             ||||||||||||||||||||
Sbjct: 95310 cttccaatcatataagccct 95329
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>gb|AC121312.7| Mus musculus chromosome 3, clone RP24-343J5, complete sequence
          Length = 165914

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    atagccaatgaagcaacctaaaat 73
             |||||||||||||||| |||||||
Sbjct: 96093 atagccaatgaagcaagctaaaat 96116
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>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19,
             complete sequence
          Length = 168538

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tgttggaattaaaacagttt 503
             ||||||||||||||||||||
Sbjct: 50465 tgttggaattaaaacagttt 50484
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>gb|AC020629.6| Homo sapiens 12q BAC RP11-76E16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 142971

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 495   aaacagtttaaaaaggaataaagt 518
             ||||||||||||||| ||||||||
Sbjct: 40068 aaacagtttaaaaagtaataaagt 40091
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>gb|DQ400408.1| Oncorhynchus mykiss microsatellite OMM3103 sequence
          Length = 1822

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 38   atttttctataaatagccaa 57
            ||||||||||||||||||||
Sbjct: 1489 atttttctataaatagccaa 1470



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  atttttctataaatagccaa 57
           ||||||||||||||||||||
Sbjct: 603 atttttctataaatagccaa 584
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>gb|AY062655.1| Arabidopsis thaliana diacylglycerol kinase (At5g63770; MBK5.25)
           mRNA, complete cds
          Length = 2754

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atgccctcgtatagatgcta 20
           ||||||||||||||||||||
Sbjct: 960 atgccctcgtatagatgcta 941
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>gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chromosome unknown, complete
              sequence
          Length = 202104

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 495    aaacagtttaaaaaggaata 514
              ||||||||||||||||||||
Sbjct: 108901 aaacagtttaaaaaggaata 108882
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 528      gctgctgggcaactcatctt 547
                ||||||||||||||||||||
Sbjct: 17221621 gctgctgggcaactcatctt 17221640
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>gb|AC093719.26| Homo sapiens 12 BAC RP11-549I9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 79925

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 493   taaaacagtttaaaaaggaa 512
             ||||||||||||||||||||
Sbjct: 69125 taaaacagtttaaaaaggaa 69106
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>emb|BX830838.1|CNS09YQH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2643

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atgccctcgtatagatgcta 20
           ||||||||||||||||||||
Sbjct: 952 atgccctcgtatagatgcta 933
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>gb|AC154704.2| Mus musculus BAC clone RP24-349I24 from chromosome 9, complete sequence
          Length = 188875

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 243    agctgtgctcttttcttccc 262
              ||||||||||||||||||||
Sbjct: 118814 agctgtgctcttttcttccc 118833
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>gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   agatttccaggaatagtttt 606
             ||||||||||||||||||||
Sbjct: 90922 agatttccaggaatagtttt 90903
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>emb|BX571831.7| Zebrafish DNA sequence from clone DKEY-266J11 in linkage group 18,
             complete sequence
          Length = 195572

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 488   ggaattaaaacagtttaaaa 507
             ||||||||||||||||||||
Sbjct: 33934 ggaattaaaacagtttaaaa 33953
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>emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in linkage group 16,
              complete sequence
          Length = 197061

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 491    attaaaacagtttaaaaaggaata 514
              |||||||||||||||||| |||||
Sbjct: 194407 attaaaacagtttaaaaaagaata 194430
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>emb|AL844608.18| Mouse DNA sequence from clone RP23-27L22 on chromosome 2, complete
              sequence
          Length = 207035

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 586    tagatttccaggaatagttt 605
              ||||||||||||||||||||
Sbjct: 190942 tagatttccaggaatagttt 190923
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>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atgccctcgtatagatgcta 20
             ||||||||||||||||||||
Sbjct: 73163 atgccctcgtatagatgcta 73144
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>gb|AC123939.5| Mus musculus BAC clone RP23-418I14 from 12, complete sequence
          Length = 188743

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 480    tatctgttggaattaaaaca 499
              ||||||||||||||||||||
Sbjct: 137559 tatctgttggaattaaaaca 137578
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>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19,
             complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tgttggaattaaaacagttt 503
             ||||||||||||||||||||
Sbjct: 52433 tgttggaattaaaacagttt 52452
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>emb|BX927187.7| Zebrafish DNA sequence from clone DKEY-44L17 in linkage group 19,
             complete sequence
          Length = 127280

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   tagaaatgtatctgttggaa 491
             ||||||||||||||||||||
Sbjct: 98032 tagaaatgtatctgttggaa 98051
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>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19,
             complete sequence
          Length = 130807

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 484   tgttggaattaaaacagttt 503
             ||||||||||||||||||||
Sbjct: 44816 tgttggaattaaaacagttt 44835
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>emb|BX296520.9| Zebrafish DNA sequence from clone RP71-4M17 in linkage group 20,
             complete sequence
          Length = 135280

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 468   accttagaaatgtatctgtt 487
             ||||||||||||||||||||
Sbjct: 13497 accttagaaatgtatctgtt 13516
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>gb|AE003570.4| Drosophila melanogaster chromosome X, section 69 of 74 of the complete
             sequence
          Length = 300051

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 473   agaaatgtatctgttggaat 492
             ||||||||||||||||||||
Sbjct: 27032 agaaatgtatctgttggaat 27051
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>gb|U33842.1|MMU33842 Mus musculus TNF-stimulated gene-14 (TSG-14) gene, partial cds
          Length = 2708

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 50   atagccaatgaagcaacctaaaat 73
            |||||||||||||||| |||||||
Sbjct: 1721 atagccaatgaagcaagctaaaat 1744
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 528      gctgctgggcaactcatctt 547
                ||||||||||||||||||||
Sbjct: 17316807 gctgctgggcaactcatctt 17316826
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>emb|BX936386.9| Zebrafish DNA sequence from clone CH211-232P21 in linkage group 3,
             complete sequence
          Length = 158520

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 587   agatttccaggaatagtttt 606
             ||||||||||||||||||||
Sbjct: 40464 agatttccaggaatagtttt 40483


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,407,534
Number of Sequences: 3902068
Number of extensions: 7407534
Number of successful extensions: 143193
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142926
Number of HSP's gapped (non-prelim): 267
length of query: 690
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 667
effective length of database: 17,143,297,704
effective search space: 11434579568568
effective search space used: 11434579568568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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