>ARNT2_MOUSE (Q61324) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 712

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 420 WKAQAHGQMHSFEHAPSDPSRTEMFQ 497
           W++Q HGQ    +H+   P +TE+FQ
Sbjct: 655 WQSQHHGQQSGEQHSHQQPGQTEVFQ 680

>ARNT2_HUMAN (Q9HBZ2) Aryl hydrocarbon receptor nuclear translocator 2 (ARNT|
           protein 2)
          Length = 706

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 420 WKAQAHGQMHSFEHAPSDPSRTEMFQ 497
           W++Q HGQ    +H+   P +TE+FQ
Sbjct: 649 WQSQHHGQQSGEQHSHQQPGQTEVFQ 674

>BSC2_YEAST (Q05611) Bypass of stop codon protein 2|
          Length = 235

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = -3

Query: 156 RILSL*WHCAYTKE---GL-VMY*I--LLCFINVISVLYTHLILSMRDCFDVLC 13
           ++LSL WHC    E   GL +M+ I  L+C + VI +L   +IL   D F  +C
Sbjct: 46  KVLSLTWHCGILSEIRSGLMLMFGIFQLMCSLGVIVLLLPIIILDAIDLFLYMC 99

>WCAC_ECOLI (P71237) Putative colanic acid biosynthesis glycosyl transferase|
           wcaC
          Length = 405

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 21/74 (28%)
 Frame = +2

Query: 230 IHKYIYIHNWMDLRSIVKACER----------------QWQHEQGCSTLD-----KFSCV 346
           +H ++    W++L+S+V+ CE+                 W     C+  D     K  C 
Sbjct: 98  LHFHVLHSYWLNLKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQ 157

Query: 347 ECPRLCHATTIKVD 388
           +CP L +   +K+D
Sbjct: 158 KCPTLNNYPPVKID 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,065,017
Number of Sequences: 219361
Number of extensions: 1757626
Number of successful extensions: 4211
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4210
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)