Clone Name
rbasd21e15
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|AC104272.5| Oryza sativa (japonica cultivar-group) chromosome...
123
7e-25
2 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
123
7e-25
3 dbj|AK101263.1| Oryza sativa (japonica cultivar-group) cDNA clon...
121
3e-24
4 dbj|AK061141.1| Oryza sativa (japonica cultivar-group) cDNA clon...
121
3e-24
5 gb|AY106338.1| Zea mays PCO074336 mRNA sequence
58
3e-05
6 ref|XM_618560.2| PREDICTED: Bos taurus similar to glutamyl-proly...
48
0.033
7 gb|AC115483.2| Drosophila melanogaster clone BACR20D18, complete...
46
0.13
8 gb|AE003640.4| Drosophila melanogaster chromosome 2L, section 49...
46
0.13
9 emb|CR352249.24| Zebrafish DNA sequence from clone DKEY-97O18 in...
46
0.13
10 gb|AC152451.5| Mus musculus BAC clone RP24-309M5 from chromosome...
44
0.51
11 gb|AC145589.3| Mus musculus BAC clone RP24-174M10 from chromosom...
44
0.51
12 gb|AC157379.7| Mus musculus chromosome 3, clone RP23-20F10, comp...
44
0.51
13 gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosom...
44
0.51
14 emb|CR735143.13| Zebrafish DNA sequence from clone CH211-244P16 ...
44
0.51
15 gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome...
44
0.51
16 gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete s...
44
0.51
17 gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete se...
44
0.51
18 emb|AL592227.4| Human DNA sequence from clone RP11-32D4 on chrom...
44
0.51
19 emb|AL596136.5| Mouse DNA sequence from clone RP23-83I13 on chro...
44
0.51
20 gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete s...
44
0.51
21 gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, comple...
44
0.51
22 emb|CR407703.23| Zebrafish DNA sequence from clone CH211-141H12 ...
44
0.51
23 emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on ch...
44
0.51
24 gb|AC110544.13| Mus musculus chromosome 3, clone RP23-112A11, co...
42
2.0
25 gb|AC161202.15| Mus musculus chromosome 8, clone RP23-479K12, co...
42
2.0
26 gb|AE017308.1| Mycoplasma mobile 163K complete genome
42
2.0
27 gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and ...
42
2.0
28 gb|AC149876.2| Xenopus tropicalis clone CH216-166O21, complete s...
42
2.0
29 gb|AC165137.1| Pan troglodytes chromosome X clone PTB-012N04 map...
42
2.0
30 gb|AC122325.4| Mus musculus BAC clone RP23-334H17 from chromosom...
42
2.0
31 ref|XM_539166.2| PREDICTED: Canis familiaris similar to adenylat...
42
2.0
32 gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome...
42
2.0
33 emb|Z78419.1|CEF26A3 Caenorhabditis elegans Cosmid F26A3, comple...
42
2.0
34 gb|AC125410.4| Mus musculus BAC clone RP23-146N3 from 3, complet...
42
2.0
35 gb|AC131942.1| Mus musculus BAC clone RP24-478A20 from 3, comple...
42
2.0
36 gb|AC069562.51| Mus musculus strain C57BL/6J clone rp23-317e13 m...
42
2.0
37 gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, co...
42
2.0
38 emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in...
42
2.0
39 gb|AC117454.5| Homo sapiens 3 BAC RP11-312P21 (Roswell Park Canc...
42
2.0
40 gb|AC154747.2| Mus musculus BAC clone RP23-116N15 from chromosom...
42
2.0
41 emb|CR936847.6| Mouse DNA sequence from clone DN-393H17 on chrom...
42
2.0
42 emb|CR450738.8| Zebrafish DNA sequence from clone DKEY-71L10 in ...
42
2.0
43 emb|CR354582.14| Zebrafish DNA sequence from clone CH211-215B24 ...
42
2.0
44 gb|AC087588.10| Homo sapiens 12 BAC RP11-8P13 (Roswell Park Canc...
42
2.0
45 gb|AC114791.3| Homo sapiens BAC clone RP11-658B24 from 4, comple...
42
2.0
46 gb|AC098595.2| Homo sapiens BAC clone RP11-495L18 from 4, comple...
42
2.0
47 gb|AC091977.3| Homo sapiens chromosome 5 clone RP11-528L24, comp...
42
2.0
48 gb|AC096586.3| Homo sapiens chromosome 4 clone RP11-700J17, comp...
42
2.0
49 ref|NM_059730.2| Caenorhabditis elegans RNA-dependent RNA polyme...
42
2.0
50 gb|AC021015.4| Homo sapiens BAC clone RP11-320C1 from 2, complet...
42
2.0
51 gb|AF159144.1|AF159144 Caenorhabditis elegans RRF-1 (rrf-1) mRNA...
42
2.0
52 gb|AC156160.4| Monodelphis domestica, clone XX-23H4, complete se...
42
2.0
53 emb|BX088587.6| Zebrafish DNA sequence from clone DKEY-71B9 in l...
42
2.0
54 emb|AL844480.29| Mouse DNA sequence from clone RP23-190B10 on ch...
42
2.0
55 gb|AC140346.4| Mus musculus BAC clone RP24-260I8 from 16, comple...
42
2.0
56 emb|BX936400.1| Yersinia pseudotuberculosis IP32953 cryptic plas...
42
2.0
57 gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 ma...
42
2.0
58 dbj|AP001002.4| Homo sapiens genomic DNA, chromosome 11q clone:R...
42
2.0
59 gb|AC135673.5| Mus musculus BAC clone RP24-279A17 from 16, compl...
42
2.0
60 gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, co...
42
2.0
61 emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on ch...
42
2.0
62 gb|AC121834.4| Mus musculus BAC clone RP24-72F20 from chromosome...
42
2.0
63 emb|AL929065.4| Mouse DNA sequence from clone RP23-270H4 on chro...
42
2.0
64 gb|AC153069.1| Homo sapiens chromosome X clone LL0XNC01-K0541 ma...
40
7.9
65 gb|AC101924.24| Mus musculus chromosome 1, clone RP24-391B5, com...
40
7.9
66 gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6...
40
7.9
67 gb|AC152008.1| Homo sapiens chromosome X clone LL0XNC01-G0216 ma...
40
7.9
68 gb|AC152007.1| Homo sapiens chromosome X clone LL0XNC01-G0137 ma...
40
7.9
69 gb|AE014852.2| Plasmodium falciparum 3D7 chromosome 12, section ...
40
7.9
70 gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL ...
40
7.9
71 gb|AC116520.14| Mus musculus chromosome 15, clone RP24-340J12, c...
40
7.9
72 gb|AC009905.12| Drosophila melanogaster clone BACR21E16, complet...
40
7.9
73 gb|AC150482.2| Bos taurus BAC CH240-308E11 (Children's Hospital...
40
7.9
74 ref|XM_417820.1| PREDICTED: Gallus gallus similar to Microtubule...
40
7.9
75 gb|AC145580.3| Mus musculus BAC clone RP24-380D12 from chromosom...
40
7.9
76 ref|XM_457055.1| Debaryomyces hansenii CBS767 hypothetical prote...
40
7.9
77 gb|AC140412.2| Mus musculus BAC clone RP24-173O20 from chromosom...
40
7.9
78 gb|AC125265.8| Mus musculus chromosome 6, clone RP24-444K24, com...
40
7.9
79 gb|AC147090.3| Pan troglodytes BAC clone RP43-58D11 from 7, comp...
40
7.9
80 gb|AY491856.1| Euphydryas aurinia clone EA92 microsatellite sequ...
40
7.9
81 gb|AC102008.9| Mus musculus chromosome 7, clone RP24-502L8, comp...
40
7.9
82 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
40
7.9
83 gb|AC163395.6| Mus musculus chromosome 7, clone RP24-251J14, com...
40
7.9
84 gb|AC110262.12| Mus musculus chromosome 17, clone RP23-291L10, c...
40
7.9
85 emb|CR848682.9| Zebrafish DNA sequence from clone CH211-286K10 i...
40
7.9
86 emb|CR538727.16| Zebrafish DNA sequence from clone DKEY-9G20 in ...
40
7.9
87 gb|AC118603.9| Mus musculus chromosome 16, clone RP24-79L6, comp...
40
7.9
88 gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosom...
40
7.9
89 gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome...
40
7.9
90 gb|AC122344.3| Mus musculus BAC clone RP23-364M19 from chromosom...
40
7.9
91 gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complet...
40
7.9
92 gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complet...
40
7.9
93 ref|XM_960918.1| Plasmodium falciparum 3D7 ATP dependent RNA hel...
40
7.9
94 gb|AC092444.2| Homo sapiens BAC clone RP11-633A20 from 7, comple...
40
7.9
95 gb|AC105951.9| Mus musculus chromosome 5, clone RP23-475D21, com...
40
7.9
96 gb|AC005008.2| Homo sapiens BAC clone GS1-52G5 from 7, complete ...
40
7.9
97 gb|AC142294.1| Pan troglodytes BAC clone RP43-73M4 from 7, compl...
40
7.9
98 gb|AC103574.7| Rattus norvegicus 1 BAC CH230-205C19 (Children's ...
40
7.9
99 emb|Z99496.1|HS509L4 Human DNA sequence from clone RP3-509L4 on ...
40
7.9
100 emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on ch...
40
7.9
101 emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chr...
40
7.9
102 gb|AE014829.1| Plasmodium falciparum 3D7 chromosome 10 section 1...
40
7.9
103 emb|AL359375.16| Human DNA sequence from clone RP11-93K18 on chr...
40
7.9
104 emb|AL357037.13| Human DNA sequence from clone RP11-383B24 on ch...
40
7.9
105 emb|AL159163.40| Human DNA sequence from clone RP11-514O12 on ch...
40
7.9
106 gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park C...
40
7.9
107 emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 o...
40
7.9
108 emb|Z98551.1|PFMAL3P6 Plasmodium falciparum MAL3P6, complete seq...
40
7.9
109 emb|Z30660.1|PFDIPSY11 P.falciparum (V1/S) gene for dihydroptero...
40
7.9
110 emb|Z30659.1|PFDIPSY10 P.falciparum (FCR3) gene for dihydroptero...
40
7.9
111 emb|Z31584.1|PFHDPKDS P.falciparum gene for hydroxymethyl-dihydr...
40
7.9
112 emb|Z30665.1|PFDIPSY5 P.falciparum (It.G2.F6) gene for dihydropt...
40
7.9
113 emb|Z30664.1|PFDIPSY3 P.falciparum (SL/D6) gene for dihydroptero...
40
7.9
114 emb|Z30658.1|PFDIPSY9 P.falciparum (Tak9/96) gene for dihydropte...
40
7.9
115 emb|Z30657.1|PFDIPSY8 P.falciparum (It.D12) gene for dihydropter...
40
7.9
116 emb|Z30656.1|PFDIPSY7 P.falciparum (K39) gene for dihydropteroat...
40
7.9
117 emb|Z30655.1|PFDIPSY6 P.falciparum (M24) gene for dihydropteroat...
40
7.9
118 emb|Z30654.1|PFDIPSY4 P.falciparum (3D7) gene for dihydropteroat...
40
7.9
119 emb|Z30653.1|PFDIPSY2 P.falciparum (W282) gene for dihydropteroa...
40
7.9
120 emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq...
40
7.9
121 emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS...
40
7.9
122 gb|BC099838.1| Mus musculus cDNA clone MGC:106592 IMAGE:5703010,...
40
7.9
123 emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chr...
40
7.9
124 gb|AC159505.7| Mus musculus 6 BAC RP23-81D20 (Roswell Park Cance...
40
7.9
125 emb|AL662909.9| Mouse DNA sequence from clone RP23-189I13 on chr...
40
7.9
126 gb|AC112646.9| Homo sapiens 3 BAC RP11-687B8 (Roswell Park Cance...
40
7.9
127 emb|AL512585.12| Mouse DNA sequence from clone RP23-236A12 on ch...
40
7.9
128 emb|BX548251.5| Zebrafish DNA sequence from clone BUSM1-127I14, ...
40
7.9
129 gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp...
40
7.9
130 gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell ...
40
7.9
131 gb|AC182736.3| Pan troglodytes BAC clone CH251-15A9 from chromos...
40
7.9
132 gb|AC022542.5| Homo sapiens chromosome 10 clone RP11-537G20, com...
40
7.9
133 ref|NM_132087.3| Drosophila melanogaster CG15893-RA (CG15893), mRNA
40
7.9
134 gb|AC108077.3| Homo sapiens BAC clone RP11-739G21 from 4, comple...
40
7.9
135 gb|AC099499.2| Homo sapiens chromosome 5 clone RP11-192H6, compl...
40
7.9
136 gb|AC015967.8| Homo sapiens chromosome 18, clone RP11-294N21, co...
40
7.9
137 gb|AY070559.1| Drosophila melanogaster LD32923 full length cDNA
40
7.9
138 ref|XM_943452.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
139 ref|XM_943451.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
140 ref|XM_937833.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
141 ref|XM_931925.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
142 ref|XM_931920.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
143 ref|XM_927180.1| PREDICTED: Homo sapiens zinc finger protein 275...
40
7.9
144 gb|AC068513.8| Homo sapiens chromosome 18, clone RP11-659L20, co...
40
7.9
145 gb|AC008876.6| Homo sapiens chromosome 5 clone CTD-2201P10, comp...
40
7.9
146 gb|AC008568.7| Homo sapiens chromosome 5 clone CTC-546K23, compl...
40
7.9
147 gb|AC090513.3| Homo sapiens chromosome 15 clone RP11-213B23 map ...
40
7.9
148 dbj|AK036241.1| Mus musculus 16 days neonate cerebellum cDNA, RI...
40
7.9
149 gb|AC006345.4|AC006345 Homo sapiens PAC clone RP4-791N16 from 14...
40
7.9
150 emb|BX470178.13| Zebrafish DNA sequence from clone CH211-285K18,...
40
7.9
151 gb|AC034105.7| Homo sapiens chromosome 16 clone RP11-170L3, comp...
40
7.9
152 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.9
153 gb|AF327241.1|F327224S18 Homo sapiens voltage-gated sodium chann...
40
7.9
154 gb|AC011303.9| Homo sapiens BAC clone RP11-342D6 from 2, complet...
40
7.9
155 gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome...
40
7.9
156 emb|BX284612.22| Mouse DNA sequence from clone RP23-332H17 on ch...
40
7.9
157 emb|BX571671.3| Zebrafish DNA sequence from clone DKEY-153O22 in...
40
7.9
158 emb|AL929228.5| Mouse DNA sequence from clone RP23-359E23 on chr...
40
7.9
159 emb|AL442663.3|CNS07ECV Human chromosome 14 DNA sequence BAC R-1...
40
7.9
160 emb|AL391833.10| Human DNA sequence from clone RP11-307K1 on chr...
40
7.9
161 gb|AF019664.1|AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc10...
40
7.9
162 emb|BX322618.8| Zebrafish DNA sequence from clone CH211-265G21 i...
40
7.9
163 gb|AC101962.7| Mus musculus chromosome 3, clone RP24-222A19, com...
40
7.9
164 gb|AE003654.3| Drosophila melanogaster chromosome 2L, section 63...
40
7.9
165 gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 ...
40
7.9
166 dbj|AP001001.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...
40
7.9
167 dbj|AP000813.4| Homo sapiens genomic DNA, chromosome 11q, clone:...
40
7.9
168 gb|AC084416.36| Mus musculus strain C57BL/6J chromosome 5 clone ...
40
7.9
169 emb|AL845437.14| Zebrafish DNA sequence from clone DKEY-98J1 in ...
40
7.9
170 gb|AC111011.6| Mus musculus BAC clone RP23-424D18 from 1, comple...
40
7.9
171 gb|AC147096.3| Mus musculus BAC clone RP23-448H3 from 14, comple...
40
7.9
172 emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chro...
40
7.9
173 ref|NM_178646.2| Mus musculus tigger transposable element derive...
40
7.9
174 dbj|AB208888.1| Homo sapiens mRNA for Sodium channel protein typ...
40
7.9
175 emb|AL928962.9| Mouse DNA sequence from clone RP23-455A4 on chro...
40
7.9
176 gb|U07706.1|PFU07706 Plasmodium falciparum NF7 dihydropteroate s...
40
7.9
177 dbj|AP000888.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo...
40
7.9
178 dbj|AP001576.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo...
40
7.9
179 emb|AL731648.6| Mouse DNA sequence from clone RP23-35I10 on chro...
40
7.9
>gb| AC104272.5 | Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1045_C06,
complete sequence
Length = 143130
Score = 123 bits (62), Expect = 7e-25
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 389 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 448
|||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| |
Sbjct: 66428 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 66487
Query: 449 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctctg 502
||||||||||| | |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 66488 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctctg 66541
>dbj| AP008211.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 123 bits (62), Expect = 7e-25
Identities = 101/114 (88%)
Strand = Plus / Plus
Query: 389 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 448
|||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| |
Sbjct: 16853932 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 16853991
Query: 449 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctctg 502
||||||||||| | |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 16853992 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctctg 16854045
>dbj| AK101263.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033032J06, full
insert sequence
Length = 1287
Score = 121 bits (61), Expect = 3e-24
Identities = 100/113 (88%)
Strand = Plus / Minus
Query: 389 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 448
|||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| |
Sbjct: 853 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 794
Query: 449 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctct 501
||||||||||| | |||||||||||||||||| |||||||||| |||||||||
Sbjct: 793 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctct 741
>dbj| AK061141.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C03, full
insert sequence
Length = 1248
Score = 121 bits (61), Expect = 3e-24
Identities = 100/113 (88%)
Strand = Plus / Minus
Query: 389 ctcccttacatggtatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgca 448
|||||||||| | ||||||| |||||||| || || ||||||||||||||| ||||| |
Sbjct: 784 ctcccttacaagttatcatcctcaaatatcgtcgagagcacaagcccacggacaaattta 725
Query: 449 ctcctttgagcacgctccttctgatccttctcggacagagatgtttcagctct 501
||||||||||| | |||||||||||||||||| |||||||||| |||||||||
Sbjct: 724 ctcctttgagccctctccttctgatccttctccgacagagatggttcagctct 672
>gb| AY106338.1 | Zea mays PCO074336 mRNA sequence
Length = 849
Score = 58.0 bits (29), Expect = 3e-05
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 402 tatcatcatcaaatattgtggaaagcacaagcccacgggcaaatgcactcctttgagcac 461
||||||||||||||||||| || ||||||||||| ||| | ||| ||||||||| | |
Sbjct: 503 tatcatcatcaaatattgtcgagagcacaagccctcggacgaatttgctcctttgaaccc 444
Query: 462 gctccttctgatccttctcggacagagatgtttcagc 498
||||||||||| ||||| |||| |||| ||||||
Sbjct: 443 tttccttctgatctttctccgacaatgatggttcagc 407
>ref| XM_618560.2 | PREDICTED: Bos taurus similar to glutamyl-prolyl tRNA synthetase
(LOC538357), mRNA
Length = 4673
Score = 48.1 bits (24), Expect = 0.033
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 403 atcatcatcaaatattgtggaaag 426
||||||||||||||||||||||||
Sbjct: 2373 atcatcatcaaatattgtggaaag 2396
>gb| AC115483.2 | Drosophila melanogaster clone BACR20D18, complete sequence
Length = 158241
Score = 46.1 bits (23), Expect = 0.13
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattc 251
|||||||||||||||||||||||
Sbjct: 149619 catacataaatacatatacattc 149641
>gb| AE003640.4 | Drosophila melanogaster chromosome 2L, section 49 of 83 of the complete
sequence
Length = 271118
Score = 46.1 bits (23), Expect = 0.13
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattc 251
|||||||||||||||||||||||
Sbjct: 185584 catacataaatacatatacattc 185562
>emb| CR352249.24 | Zebrafish DNA sequence from clone DKEY-97O18 in linkage group 7,
complete sequence
Length = 180142
Score = 46.1 bits (23), Expect = 0.13
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattcataa 255
||||||||||| |||||||||||||||
Sbjct: 1040 catacataaatccatatacattcataa 1014
>gb| AC152451.5 | Mus musculus BAC clone RP24-309M5 from chromosome 12, complete sequence
Length = 145113
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcata 254
|||||||| |||||||||||||||||
Sbjct: 80352 catacatacatacatatacattcata 80377
>gb| AC145589.3 | Mus musculus BAC clone RP24-174M10 from chromosome Y, complete sequence
Length = 152506
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacattcataa 255
|||||||||||||||||||| |||||
Sbjct: 75130 atacataaatacatatacatacataa 75105
>gb| AC157379.7 | Mus musculus chromosome 3, clone RP23-20F10, complete sequence
Length = 183455
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattcata 254
|||||||| |||||||||||||||||
Sbjct: 94173 catacatatatacatatacattcata 94148
>gb| AC134459.4 | Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence
Length = 211773
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcata 254
||||||||||||||||||||| ||||
Sbjct: 88227 catacataaatacatatacatacata 88252
>emb| CR735143.13 | Zebrafish DNA sequence from clone CH211-244P16 in linkage group 5,
complete sequence
Length = 147626
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 228 gcatacataaatacatatacattcat 253
||||||||||||||||||||| ||||
Sbjct: 95743 gcatacataaatacatatacagtcat 95718
>gb| AC122013.4 | Mus musculus BAC clone RP24-357P7 from chromosome 12, complete
sequence
Length = 175788
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattcata 254
|||||||| |||||||||||||||||
Sbjct: 7062 catacatacatacatatacattcata 7037
>gb| AC124955.34 | Medicago truncatula clone mth2-12l24, complete sequence
Length = 115804
Score = 44.1 bits (22), Expect = 0.51
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 6 aatatatacataaaacatcaaa 27
||||||||||||||||||||||
Sbjct: 61100 aatatatacataaaacatcaaa 61079
>gb| AC147405.7 | Medicago truncatula clone mth2-146n5, complete sequence
Length = 147062
Score = 44.1 bits (22), Expect = 0.51
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 aatatatacataaaacatcaaa 27
||||||||||||||||||||||
Sbjct: 85963 aatatatacataaaacatcaaa 85984
>emb| AL592227.4 | Human DNA sequence from clone RP11-32D4 on chromosome 9 Contains a CpG
island, complete sequence
Length = 55535
Score = 44.1 bits (22), Expect = 0.51
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 234 ataaatacatatacattcataactggatgg 263
|||||||||||||||||||| ||||||||
Sbjct: 49958 ataaatacatatacattcattgctggatgg 49929
>emb| AL596136.5 | Mouse DNA sequence from clone RP23-83I13 on chromosome 11 Contains the
Rabep1 gene for rabaptin, RAB GTPase binding effector
protein 1, a ribosomal protein 23a (Rpl23a) pseudogene, a
ribosomal protein 23A (Rpl23a) pseudogene, the Nup88 gene
for nucleoporin 88, four novel genes, the C1qbp gene for
complement component 1 q subcomponent binding protein, the
Dhx33 gene for DEAH (Asp-Glu-Ala-His) box polypeptide 33, a
novel pseudogene, a CARD domain pseudogene and six CpG
islands, complete sequence
Length = 254116
Score = 44.1 bits (22), Expect = 0.51
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 228 gcatacataaatacatatacat 249
||||||||||||||||||||||
Sbjct: 215404 gcatacataaatacatatacat 215383
>gb| AC130810.14 | Medicago truncatula clone mth2-36b14, complete sequence
Length = 117901
Score = 44.1 bits (22), Expect = 0.51
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 aatatatacataaaacatcaaa 27
||||||||||||||||||||||
Sbjct: 11569 aatatatacataaaacatcaaa 11590
>gb| AC009476.3 | Homo sapiens BAC clone RP11-207O14 from 2, complete sequence
Length = 184406
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcata 254
|||||||| |||||||||||||||||
Sbjct: 64316 catacatatatacatatacattcata 64341
>emb| CR407703.23 | Zebrafish DNA sequence from clone CH211-141H12 in linkage group 9,
complete sequence
Length = 150766
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcata 254
||||||||||||||||||||| ||||
Sbjct: 91015 catacataaatacatatacatacata 91040
>emb| AL611985.22 | Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete
sequence
Length = 219205
Score = 44.1 bits (22), Expect = 0.51
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 228 gcatacataaatacatatacattcat 253
||||||||| ||||||||||||||||
Sbjct: 157304 gcatacatatatacatatacattcat 157329
>gb| AC110544.13 | Mus musculus chromosome 3, clone RP23-112A11, complete sequence
Length = 201027
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 115958 catacataaatacatatacat 115978
>gb| AC161202.15 | Mus musculus chromosome 8, clone RP23-479K12, complete sequence
Length = 175459
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcat 253
|||||||| ||||||||||||||||
Sbjct: 40983 catacatatatacatatacattcat 41007
>gb| AE017308.1 | Mycoplasma mobile 163K complete genome
Length = 777079
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 542 aattattaaattatagcaaaa 562
|||||||||||||||||||||
Sbjct: 523439 aattattaaattatagcaaaa 523419
>gb| AF241726.3 | Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4,
complete sequences
Length = 244978
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 510 accagacattcaatcaaatatttga 534
|||| ||||||||||||||||||||
Sbjct: 95252 accacacattcaatcaaatatttga 95228
>gb| AC149876.2 | Xenopus tropicalis clone CH216-166O21, complete sequence
Length = 185995
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcat 253
|||||||| ||||||||||||||||
Sbjct: 12969 catacatacatacatatacattcat 12993
>gb| AC165137.1 | Pan troglodytes chromosome X clone PTB-012N04 map human ortholog p11.4,
complete sequence
Length = 93431
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 510 accagacattcaatcaaatatttga 534
|||| ||||||||||||||||||||
Sbjct: 53347 accacacattcaatcaaatatttga 53323
>gb| AC122325.4 | Mus musculus BAC clone RP23-334H17 from chromosome 5, complete
sequence
Length = 184869
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 2043 catacataaatacatatacat 2063
>ref| XM_539166.2 | PREDICTED: Canis familiaris similar to adenylate cyclase 8
(LOC482045), mRNA
Length = 3842
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 288 gtgagcggcagtggcagcatg 308
|||||||||||||||||||||
Sbjct: 869 gtgagcggcagtggcagcatg 849
>gb| AC125057.5 | Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence
Length = 182276
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcat 253
||||||| |||||||||||||||||
Sbjct: 95665 catacatcaatacatatacattcat 95689
>emb| Z78419.1 |CEF26A3 Caenorhabditis elegans Cosmid F26A3, complete sequence
Length = 38019
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 512 cagacattcaatcaaatatttgata 536
||||||||||||||||||| |||||
Sbjct: 10626 cagacattcaatcaaatatgtgata 10650
>gb| AC125410.4 | Mus musculus BAC clone RP23-146N3 from 3, complete sequence
Length = 213701
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 101908 catacataaatacatatacat 101888
>gb| AC131942.1 | Mus musculus BAC clone RP24-478A20 from 3, complete sequence
Length = 209411
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattcat 253
||||||||||||||||| |||||||
Sbjct: 157756 catacataaatacatatgcattcat 157732
>gb| AC069562.51 | Mus musculus strain C57BL/6J clone rp23-317e13 map 13, complete sequence
Length = 215278
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacattcata 254
|||||||||||||||||||| ||||
Sbjct: 207785 atacataaatacatatacatacata 207809
>gb| AC156496.10 | Mus musculus chromosome 7, clone RP24-246N21, complete sequence
Length = 143815
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 228 gcatacataaatacatataca 248
|||||||||||||||||||||
Sbjct: 35870 gcatacataaatacatataca 35850
>emb| BX927158.14 | Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
complete sequence
Length = 144909
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 73677 catacataaatacatatacat 73657
>gb| AC117454.5 | Homo sapiens 3 BAC RP11-312P21 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 125001
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacattcata 254
|||||||||||||||||||| ||||
Sbjct: 77386 atacataaatacatatacatacata 77410
>gb| AC154747.2 | Mus musculus BAC clone RP23-116N15 from chromosome 13, complete
sequence
Length = 209567
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacattcata 254
|||||||||||||||||||| ||||
Sbjct: 84672 atacataaatacatatacatacata 84696
>emb| CR936847.6 | Mouse DNA sequence from clone DN-393H17 on chromosome 11, complete
sequence
Length = 170807
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 98430 catacataaatacatatacat 98410
>emb| CR450738.8 | Zebrafish DNA sequence from clone DKEY-71L10 in linkage group 8,
complete sequence
Length = 101924
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 21812 catacataaatacatatacat 21832
>emb| CR354582.14 | Zebrafish DNA sequence from clone CH211-215B24 in linkage group 8,
complete sequence
Length = 227074
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 60892 catacataaatacatatacat 60872
>gb| AC087588.10 | Homo sapiens 12 BAC RP11-8P13 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 146167
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 114840 catacataaatacatatacat 114860
>gb| AC114791.3 | Homo sapiens BAC clone RP11-658B24 from 4, complete sequence
Length = 113268
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 234 ataaatacatatacattcata 254
|||||||||||||||||||||
Sbjct: 22107 ataaatacatatacattcata 22087
>gb| AC098595.2 | Homo sapiens BAC clone RP11-495L18 from 4, complete sequence
Length = 160151
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 558 caaaacatacatttcaaaact 578
|||||||||||||||||||||
Sbjct: 147019 caaaacatacatttcaaaact 146999
>gb| AC091977.3 | Homo sapiens chromosome 5 clone RP11-528L24, complete sequence
Length = 183494
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacattcata 254
||||||| |||||||||||||||||
Sbjct: 96606 atacatatatacatatacattcata 96630
>gb| AC096586.3 | Homo sapiens chromosome 4 clone RP11-700J17, complete sequence
Length = 175517
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 233 cataaatacatatacattcat 253
|||||||||||||||||||||
Sbjct: 169298 cataaatacatatacattcat 169278
>ref| NM_059730.2 | Caenorhabditis elegans RNA-dependent RNA polymerase Family family
member (rrf-1) (rrf-1) mRNA, complete cds
Length = 5025
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 512 cagacattcaatcaaatatttgata 536
||||||||||||||||||| |||||
Sbjct: 1138 cagacattcaatcaaatatgtgata 1114
>gb| AC021015.4 | Homo sapiens BAC clone RP11-320C1 from 2, complete sequence
Length = 148997
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacatt 250
|||||||||||||||||||||
Sbjct: 31458 atacataaatacatatacatt 31478
>gb| AF159144.1 |AF159144 Caenorhabditis elegans RRF-1 (rrf-1) mRNA, complete cds
Length = 5025
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 512 cagacattcaatcaaatatttgata 536
||||||||||||||||||| |||||
Sbjct: 1138 cagacattcaatcaaatatgtgata 1114
>gb| AC156160.4 | Monodelphis domestica, clone XX-23H4, complete sequence
Length = 143400
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacatt 250
|||||||||||||||||||||
Sbjct: 116318 atacataaatacatatacatt 116298
>emb| BX088587.6 | Zebrafish DNA sequence from clone DKEY-71B9 in linkage group 17, complete
sequence
Length = 154682
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 114603 catacataaatacatatacat 114583
>emb| AL844480.29 | Mouse DNA sequence from clone RP23-190B10 on chromosome 4, complete
sequence
Length = 175199
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacatt 250
|||||||||||||||||||||
Sbjct: 26820 atacataaatacatatacatt 26840
>gb| AC140346.4 | Mus musculus BAC clone RP24-260I8 from 16, complete sequence
Length = 185587
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 179463 catacataaatacatatacat 179483
>emb| BX936400.1 | Yersinia pseudotuberculosis IP32953 cryptic plasmid, complete
sequence
Length = 27702
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacatt 250
|||||||||||||||||||||
Sbjct: 1792 atacataaatacatatacatt 1772
>gb| AC175366.1 | Pan troglodytes chromosome X clone CH251-499L9 map human ortholog p11.4,
complete sequence
Length = 217335
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 510 accagacattcaatcaaatatttga 534
|||| ||||||||||||||||||||
Sbjct: 149493 accacacattcaatcaaatatttga 149469
>dbj| AP001002.4 | Homo sapiens genomic DNA, chromosome 11q clone:RP11-678K21, complete
sequences
Length = 164380
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcat 253
|||| ||||||||||||||||||||
Sbjct: 62261 catatataaatacatatacattcat 62285
>gb| AC135673.5 | Mus musculus BAC clone RP24-279A17 from 16, complete sequence
Length = 173965
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 62884 catacataaatacatatacat 62904
>gb| AC120789.12 | Mus musculus chromosome 8, clone RP23-441F24, complete sequence
Length = 204013
Score = 42.1 bits (21), Expect = 2.0
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattcat 253
|||||||| ||||||||||||||||
Sbjct: 111973 catacatatatacatatacattcat 111997
>emb| AL606985.26 | Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete
sequence
Length = 193947
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 173192 catacataaatacatatacat 173172
>gb| AC121834.4 | Mus musculus BAC clone RP24-72F20 from chromosome 5, complete sequence
Length = 226382
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacat 249
|||||||||||||||||||||
Sbjct: 129434 catacataaatacatatacat 129454
>emb| AL929065.4 | Mouse DNA sequence from clone RP23-270H4 on chromosome 2, complete
sequence
Length = 173846
Score = 42.1 bits (21), Expect = 2.0
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacatt 250
|||||||||||||||||||||
Sbjct: 6932 atacataaatacatatacatt 6952
>gb| AC153069.1 | Homo sapiens chromosome X clone LL0XNC01-K0541 map q28, complete
sequence
Length = 35323
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 20138 ttcctccactattctcatgt 20157
>gb| AC101924.24 | Mus musculus chromosome 1, clone RP24-391B5, complete sequence
Length = 161617
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 231 tacataaatacatatacattcata 254
||||||||||||||||||| ||||
Sbjct: 106989 tacataaatacatatacatacata 107012
>gb| AE014834.1 | Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete
sequence
Length = 253001
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 12995 catacataaatacatataca 12976
>gb| AC152008.1 | Homo sapiens chromosome X clone LL0XNC01-G0216 map q28, complete
sequence
Length = 35784
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 32054 ttcctccactattctcatgt 32073
>gb| AC152007.1 | Homo sapiens chromosome X clone LL0XNC01-G0137 map q28, complete
sequence
Length = 41352
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 17672 ttcctccactattctcatgt 17691
>gb| AE014852.2 | Plasmodium falciparum 3D7 chromosome 12, section 9 of 9 of the complete
sequence
Length = 260929
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 81435 atacataaatacatatacat 81416
>gb| AC005611.1 | Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete
sequence
Length = 107190
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 486 gagatgtttcagctctgtaaattc 509
||||||||||||||||| ||||||
Sbjct: 79610 gagatgtttcagctctgaaaattc 79587
>gb| AC116520.14 | Mus musculus chromosome 15, clone RP24-340J12, complete sequence
Length = 149118
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 102789 catacataaatacatataca 102770
>gb| AC009905.12 | Drosophila melanogaster clone BACR21E16, complete sequence
Length = 170662
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 541 gaattattaaattatagcaaaacatacatttcaaaa 576
|||| ||||||||||||| || |||||||||||||
Sbjct: 90580 gaataattaaattatagctgaatatacatttcaaaa 90615
>gb| AC150482.2 | Bos taurus BAC CH240-308E11 (Children's Hospital Oakland Research
Institute Bovine BAC Library (male)) complete sequence
Length = 179880
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 231 tacataaatacatatacattcata 254
||||||||||||||||||| ||||
Sbjct: 32008 tacataaatacatatacatgcata 32031
>ref| XM_417820.1 | PREDICTED: Gallus gallus similar to Microtubule-actin crosslinking
factor 1, isoform 4 (LOC419673), mRNA
Length = 4793
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 484 cagagatgtttcagctctgt 503
||||||||||||||||||||
Sbjct: 1132 cagagatgtttcagctctgt 1113
>gb| AC145580.3 | Mus musculus BAC clone RP24-380D12 from chromosome 16, complete
sequence
Length = 130390
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 231 tacataaatacatatacattcata 254
|||||| |||||||||||||||||
Sbjct: 51750 tacatatatacatatacattcata 51727
>ref| XM_457055.1 | Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B02024g)
partial mRNA
Length = 1230
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 176 agctgcaacacaaagccttc 195
||||||||||||||||||||
Sbjct: 677 agctgcaacacaaagccttc 658
>gb| AC140412.2 | Mus musculus BAC clone RP24-173O20 from chromosome 14, complete
sequence
Length = 152809
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 234 ataaatacatatacattcat 253
||||||||||||||||||||
Sbjct: 19266 ataaatacatatacattcat 19247
>gb| AC125265.8 | Mus musculus chromosome 6, clone RP24-444K24, complete sequence
Length = 156056
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 238 atacatatacattcataactggat 261
|||||||||||||||||| |||||
Sbjct: 28660 atacatatacattcataagtggat 28683
>gb| AC147090.3 | Pan troglodytes BAC clone RP43-58D11 from 7, complete sequence
Length = 200913
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 175 aagctgcaacacaaagccttcctc 198
|||||||||||||||| |||||||
Sbjct: 61006 aagctgcaacacaaagtcttcctc 60983
>gb| AY491856.1 | Euphydryas aurinia clone EA92 microsatellite sequence
Length = 285
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattca 252
|||||||| |||||||||||||||
Sbjct: 74 catacatacatacatatacattca 97
>gb| AC102008.9 | Mus musculus chromosome 7, clone RP24-502L8, complete sequence
Length = 194538
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 144797 catacataaatacatataca 144816
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 395 tacatggtatcatcatcaaa 414
||||||||||||||||||||
Sbjct: 1089545 tacatggtatcatcatcaaa 1089564
>gb| AC163395.6 | Mus musculus chromosome 7, clone RP24-251J14, complete sequence
Length = 151667
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 49870 catacataaatacatataca 49889
>gb| AC110262.12 | Mus musculus chromosome 17, clone RP23-291L10, complete sequence
Length = 210850
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 80741 catacataaatacatataca 80722
>emb| CR848682.9 | Zebrafish DNA sequence from clone CH211-286K10 in linkage group 9,
complete sequence
Length = 84943
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 52660 catacataaatacatataca 52641
>emb| CR538727.16 | Zebrafish DNA sequence from clone DKEY-9G20 in linkage group 9,
complete sequence
Length = 155321
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 38686 catacataaatacatataca 38667
>gb| AC118603.9 | Mus musculus chromosome 16, clone RP24-79L6, complete sequence
Length = 190432
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 231 tacataaatacatatacattcata 254
|||||| |||||||||||||||||
Sbjct: 64243 tacatatatacatatacattcata 64266
>gb| AC132259.3 | Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence
Length = 131182
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 518 ttcaatcaaatatttgataa 537
||||||||||||||||||||
Sbjct: 113626 ttcaatcaaatatttgataa 113607
>gb| AC115290.5 | Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
Length = 245623
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 199819 atacataaatacatatacat 199838
>gb| AC122344.3 | Mus musculus BAC clone RP23-364M19 from chromosome 9, complete sequence
Length = 209165
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 228 gcatacataaatacatatacattc 251
||||||||| ||||||||||||||
Sbjct: 17059 gcatacatacatacatatacattc 17082
>gb| AC124743.5 | Mus musculus BAC clone RP23-219C1 from 1, complete sequence
Length = 220167
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 231 tacataaatacatatacattcata 254
||||||||||||||||||| ||||
Sbjct: 36667 tacataaatacatatacatacata 36690
>gb| AC112521.4 | Mus musculus BAC clone RP23-186C6 from 9, complete sequence
Length = 230334
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattca 252
|||||||| |||||||||||||||
Sbjct: 161164 catacatatatacatatacattca 161141
>ref| XM_960918.1 | Plasmodium falciparum 3D7 ATP dependent RNA helicase (PFF0100w)
partial mRNA
Length = 4053
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 540 agaattattaaattatagca 559
||||||||||||||||||||
Sbjct: 2484 agaattattaaattatagca 2503
>gb| AC092444.2 | Homo sapiens BAC clone RP11-633A20 from 7, complete sequence
Length = 7192
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 175 aagctgcaacacaaagccttcctc 198
|||||||||||||||| |||||||
Sbjct: 6225 aagctgcaacacaaagtcttcctc 6202
>gb| AC105951.9 | Mus musculus chromosome 5, clone RP23-475D21, complete sequence
Length = 178610
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 10904 atacataaatacatatacat 10885
>gb| AC005008.2 | Homo sapiens BAC clone GS1-52G5 from 7, complete sequence
Length = 91634
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 175 aagctgcaacacaaagccttcctc 198
|||||||||||||||| |||||||
Sbjct: 1033 aagctgcaacacaaagtcttcctc 1010
>gb| AC142294.1 | Pan troglodytes BAC clone RP43-73M4 from 7, complete sequence
Length = 173444
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 175 aagctgcaacacaaagccttcctc 198
|||||||||||||||| |||||||
Sbjct: 96943 aagctgcaacacaaagtcttcctc 96920
>gb| AC103574.7 | Rattus norvegicus 1 BAC CH230-205C19 (Children's Hospital Oakland
Research Institute) complete sequence
Length = 199047
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 12027 atacataaatacatatacat 12046
>emb| Z99496.1 |HS509L4 Human DNA sequence from clone RP3-509L4 on chromosome 6q22.1-22.33
Contains part of the gene for serologically defined breast
cancer antigen NY-BR-15 (LOC221312), the PLN gene for
phospholamban (PLB), a bromodomain-containing 7 (BRD7)
pseudogene and a synovial sarcoma X breakpoint gene
pseudogene, complete sequence
Length = 150290
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 234 ataaatacatatacattcat 253
||||||||||||||||||||
Sbjct: 53784 ataaatacatatacattcat 53765
>emb| AL360006.15 | Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
sequence
Length = 113420
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 96389 atacataaatacatatacat 96408
>emb| AL359073.25 | Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the
5' end of the gene for regulator of differentiation 1
(ROD1), a ribosomal protein L32 (RPL32) pseudogene and a
CpG island.n, complete sequence
Length = 64850
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 33916 atacataaatacatatacat 33935
>gb| AE014829.1 | Plasmodium falciparum 3D7 chromosome 10 section 1 of 7 of the complete
sequence
Length = 250078
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 8 tatatacataaaacatcaaa 27
||||||||||||||||||||
Sbjct: 145093 tatatacataaaacatcaaa 145112
>emb| AL359375.16 | Human DNA sequence from clone RP11-93K18 on chromosome 10, complete
sequence
Length = 126846
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 19928 atacataaatacatatacat 19947
>emb| AL357037.13 | Human DNA sequence from clone RP11-383B24 on chromosome 10 Contains the
3' end of a 44kDA polymerase (RNA) III (DNA directed)
polypeptide D (POLR3D) pseudogene, the 3' end of the ADK
gene for adenosine kinase and a novel pseudogene, complete
sequence
Length = 165773
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 107637 atacataaatacatatacat 107656
>emb| AL159163.40 | Human DNA sequence from clone RP11-514O12 on chromosome 6 Contains the
5' end of a variant of the RPS6KA2 gene for ribosomal
protein S6 kinase, 90kD, polypeptide 2 (RSK3), a novel
gene, the 3' end of the gene for ribonuclease 6 precursor
(RNASE6PL)(FLJ10907) and 2 CpG islands, complete sequence
Length = 156938
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 180 gcaacacaaagccttcctcc 199
||||||||||||||||||||
Sbjct: 17617 gcaacacaaagccttcctcc 17598
>gb| AC087880.24 | Homo sapiens 12q BAC RP11-121J20 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 188361
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 226 aggcatacataaatacatatacat 249
||||||||||| ||||||||||||
Sbjct: 116992 aggcatacatagatacatatacat 116969
>emb| AL031119.1 |HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains the
3' end of a variant of the EPM2A gene for progressive
myoclonus type 2 epilepsy (Lafora disease) protein
(laforin) and a BTB/POZ domain zinc finger protein
pseudogene, complete sequence
Length = 115835
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 78063 atacataaatacatatacat 78044
>emb| Z98551.1 |PFMAL3P6 Plasmodium falciparum MAL3P6, complete sequence
Length = 164399
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 163367 atacataaatacatatacat 163386
>emb| Z30660.1 |PFDIPSY11 P.falciparum (V1/S) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30659.1 |PFDIPSY10 P.falciparum (FCR3) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z31584.1 |PFHDPKDS P.falciparum gene for hydroxymethyl-dihydropterin pyrophosphokinase
and dihydropteroate synthetase
Length = 2647
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 2435 atacataaatacatatacat 2416
>emb| Z30665.1 |PFDIPSY5 P.falciparum (It.G2.F6) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30664.1 |PFDIPSY3 P.falciparum (SL/D6) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30658.1 |PFDIPSY9 P.falciparum (Tak9/96) gene for dihydropteroate syntethase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30657.1 |PFDIPSY8 P.falciparum (It.D12) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30656.1 |PFDIPSY7 P.falciparum (K39) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30655.1 |PFDIPSY6 P.falciparum (M24) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30654.1 |PFDIPSY4 P.falciparum (3D7) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| Z30653.1 |PFDIPSY2 P.falciparum (W282) gene for dihydropteroate synthetase
Length = 1269
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 1109 atacataaatacatatacat 1090
>emb| CR382398.1 | Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
Length = 349418
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 540 agaattattaaattatagca 559
||||||||||||||||||||
Sbjct: 94986 agaattattaaattatagca 95005
>emb| CR382134.1 | Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces
hansenii
Length = 1349926
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 176 agctgcaacacaaagccttc 195
||||||||||||||||||||
Sbjct: 152700 agctgcaacacaaagccttc 152681
>gb| BC099838.1 | Mus musculus cDNA clone MGC:106592 IMAGE:5703010, complete cds
Length = 4849
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 4210 catacataaatacatataca 4191
>emb| AL713870.26 | Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5'
end of the Slc36a3 gene for solute carrier family 36
(proton/amino acid symporter) member 3, two novel genes,
the Tramd1 gene for tramdorin 1 (transmembrane domain rich
protein), the Slc36a1 gene for solute carrier family 36
(proton/amino acid symporter) member 1 and the gene for the
ortholog of human and rat FAT tumor suppressor homolog 2
(Drosophila) FAT2, complete sequence
Length = 188782
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 235 taaatacatatacattcata 254
||||||||||||||||||||
Sbjct: 143223 taaatacatatacattcata 143242
>gb| AC159505.7 | Mus musculus 6 BAC RP23-81D20 (Roswell Park Cancer Institute (C57BL/6J
Female) Mouse BAC Library) complete sequence
Length = 254457
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 238 atacatatacattcataactggat 261
|||||||||||||||||| |||||
Sbjct: 138651 atacatatacattcataagtggat 138628
>emb| AL662909.9 | Mouse DNA sequence from clone RP23-189I13 on chromosome 11 Contains the
5' end of the Odz2 gene for odd Oz/ten-m homolog 2
(Drosophila) and a CpG island, complete sequence
Length = 201564
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 231 tacataaatacatatacatt 250
||||||||||||||||||||
Sbjct: 61996 tacataaatacatatacatt 62015
>gb| AC112646.9 | Homo sapiens 3 BAC RP11-687B8 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 38601
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 30829 atacataaatacatatacat 30848
>emb| AL512585.12 | Mouse DNA sequence from clone RP23-236A12 on chromosome 4, complete
sequence
Length = 217400
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 133103 catacataaatacatataca 133122
>emb| BX548251.5 | Zebrafish DNA sequence from clone BUSM1-127I14, complete sequence
Length = 115316
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 4 cgaatatatacataaaacatcaaa 27
||||| ||||||||||||||||||
Sbjct: 64681 cgaatctatacataaaacatcaaa 64658
>gb| AC010424.9 | Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
Length = 192282
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 486 gagatgtttcagctctgtaaattc 509
||||||||||||||||| ||||||
Sbjct: 139977 gagatgtttcagctctgaaaattc 139954
>gb| AC023710.5 | Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute
Drosophila BAC Library) complete sequence
Length = 189976
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 227 ggcatacataaatacatata 246
||||||||||||||||||||
Sbjct: 108249 ggcatacataaatacatata 108230
>gb| AC182736.3 | Pan troglodytes BAC clone CH251-15A9 from chromosome 7, complete sequence
Length = 181648
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 aatcgaatatatacataaaa 20
||||||||||||||||||||
Sbjct: 132759 aatcgaatatatacataaaa 132740
>gb| AC022542.5 | Homo sapiens chromosome 10 clone RP11-537G20, complete sequence
Length = 185857
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 225 aaggcatacataaatacata 244
||||||||||||||||||||
Sbjct: 21789 aaggcatacataaatacata 21808
>ref| NM_132087.3 | Drosophila melanogaster CG15893-RA (CG15893), mRNA
Length = 1929
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 227 ggcatacataaatacatata 246
||||||||||||||||||||
Sbjct: 1608 ggcatacataaatacatata 1589
>gb| AC108077.3 | Homo sapiens BAC clone RP11-739G21 from 4, complete sequence
Length = 106983
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 562 acatacatttcaaaactcaa 581
||||||||||||||||||||
Sbjct: 55715 acatacatttcaaaactcaa 55734
>gb| AC099499.2 | Homo sapiens chromosome 5 clone RP11-192H6, complete sequence
Length = 145787
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 126171 atacataaatacatatacat 126152
>gb| AC015967.8 | Homo sapiens chromosome 18, clone RP11-294N21, complete sequence
Length = 186726
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 89573 atacataaatacatatacat 89592
>gb| AY070559.1 | Drosophila melanogaster LD32923 full length cDNA
Length = 1911
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 227 ggcatacataaatacatata 246
||||||||||||||||||||
Sbjct: 1589 ggcatacataaatacatata 1570
>ref| XM_943452.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
8 (ZNF275), mRNA
Length = 6243
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>ref| XM_943451.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
7 (ZNF275), mRNA
Length = 5746
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>ref| XM_937833.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
6 (ZNF275), mRNA
Length = 6539
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>ref| XM_931925.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
4 (ZNF275), mRNA
Length = 6243
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>ref| XM_931920.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
3 (ZNF275), mRNA
Length = 5746
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>ref| XM_927180.1 | PREDICTED: Homo sapiens zinc finger protein 275, transcript variant
2 (ZNF275), mRNA
Length = 6539
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 193 ttcctccactattctcatgt 212
||||||||||||||||||||
Sbjct: 272 ttcctccactattctcatgt 291
>gb| AC068513.8 | Homo sapiens chromosome 18, clone RP11-659L20, complete sequence
Length = 153873
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 105162 atacataaatacatatacat 105181
>gb| AC008876.6 | Homo sapiens chromosome 5 clone CTD-2201P10, complete sequence
Length = 152707
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 563 catacatttcaaaactcaaa 582
||||||||||||||||||||
Sbjct: 96909 catacatttcaaaactcaaa 96890
>gb| AC008568.7 | Homo sapiens chromosome 5 clone CTC-546K23, complete sequence
Length = 152706
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 563 catacatttcaaaactcaaa 582
||||||||||||||||||||
Sbjct: 55798 catacatttcaaaactcaaa 55817
>gb| AC090513.3 | Homo sapiens chromosome 15 clone RP11-213B23 map 15q15, complete sequence
Length = 161867
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 560 aaacatacatttcaaaactcaaaa 583
|||||||||||||||||| |||||
Sbjct: 131913 aaacatacatttcaaaacacaaaa 131936
>dbj| AK036241.1 | Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
enriched library, clone:9630047N16 product:hypothetical
protein, full insert sequence
Length = 4778
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 4185 catacataaatacatataca 4166
>gb| AC006345.4 |AC006345 Homo sapiens PAC clone RP4-791N16 from 14q24.3, complete sequence
Length = 125508
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 232 acataaatacatatacattcataa 255
|||||||||||||||||| |||||
Sbjct: 13828 acataaatacatatacatacataa 13851
>emb| BX470178.13 | Zebrafish DNA sequence from clone CH211-285K18, complete sequence
Length = 166954
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 130356 atacataaatacatatacat 130375
>gb| AC034105.7 | Homo sapiens chromosome 16 clone RP11-170L3, complete sequence
Length = 156484
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 559 aaaacatacatttcaaaactcaaa 582
||||||||||| ||||||||||||
Sbjct: 17357 aaaacatacatatcaaaactcaaa 17380
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 395 tacatggtatcatcatcaaa 414
||||||||||||||||||||
Sbjct: 1089543 tacatggtatcatcatcaaa 1089562
>gb| AF327241.1 |F327224S18 Homo sapiens voltage-gated sodium channel type II alpha subunit
(SCN2A) gene, exon 20
Length = 599
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 235 taaatacatatacattcata 254
||||||||||||||||||||
Sbjct: 519 taaatacatatacattcata 538
>gb| AC011303.9 | Homo sapiens BAC clone RP11-342D6 from 2, complete sequence
Length = 188616
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 235 taaatacatatacattcata 254
||||||||||||||||||||
Sbjct: 99032 taaatacatatacattcata 99051
>gb| AC118980.2 | Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11,
complete sequence
Length = 126827
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 395 tacatggtatcatcatcaaa 414
||||||||||||||||||||
Sbjct: 109760 tacatggtatcatcatcaaa 109779
>emb| BX284612.22 | Mouse DNA sequence from clone RP23-332H17 on chromosome 2, complete
sequence
Length = 132718
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 111274 atacataaatacatatacat 111293
>emb| BX571671.3 | Zebrafish DNA sequence from clone DKEY-153O22 in linkage group 20,
complete sequence
Length = 86323
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 229 catacataaatacatatacattca 252
|||||||| |||||||||||||||
Sbjct: 72008 catacatacatacatatacattca 72031
>emb| AL929228.5 | Mouse DNA sequence from clone RP23-359E23 on chromosome 2, complete
sequence
Length = 212717
Score = 40.1 bits (20), Expect = 7.9
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 228 gcatacataaatacatatacattcataa 255
|||||| ||||||||||||||| |||||
Sbjct: 171873 gcatacctaaatacatatacatacataa 171900
>emb| AL442663.3 |CNS07ECV Human chromosome 14 DNA sequence BAC R-109N23 of library RPCI-11 from
chromosome 14 of Homo sapiens (Human), complete sequence
Length = 165423
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 232 acataaatacatatacattcataa 255
|||||||||||||||||| |||||
Sbjct: 51242 acataaatacatatacatacataa 51265
>emb| AL391833.10 | Human DNA sequence from clone RP11-307K1 on chromosome 6, complete
sequence
Length = 201512
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 100394 catacataaatacatataca 100413
>gb| AF019664.1 |AF019664 Homo sapiens cosmids 52b3, 189g5, ICRFc109N244QD2, P1 255h6, and PAC
pDJ84g15 from chromosome 6q27 encompassing markers D6S193
and D6S297, complete sequence
Length = 68940
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 180 gcaacacaaagccttcctcc 199
||||||||||||||||||||
Sbjct: 34974 gcaacacaaagccttcctcc 34955
>emb| BX322618.8 | Zebrafish DNA sequence from clone CH211-265G21 in linkage group 20,
complete sequence
Length = 144211
Score = 40.1 bits (20), Expect = 7.9
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 229 catacataaatacatatacattca 252
|||||||| |||||||||||||||
Sbjct: 16458 catacatacatacatatacattca 16435
>gb| AC101962.7 | Mus musculus chromosome 3, clone RP24-222A19, complete sequence
Length = 198284
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 518 ttcaatcaaatatttgataa 537
||||||||||||||||||||
Sbjct: 175341 ttcaatcaaatatttgataa 175360
>gb| AE003654.3 | Drosophila melanogaster chromosome 2L, section 63 of 83 of the complete
sequence
Length = 258558
Score = 40.1 bits (20), Expect = 7.9
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 541 gaattattaaattatagcaaaacatacatttcaaaa 576
|||| ||||||||||||| || |||||||||||||
Sbjct: 239608 gaataattaaattatagctgaatatacatttcaaaa 239643
>gb| AE003437.3 | Drosophila melanogaster chromosome X, section 21 of 74 of the complete
sequence
Length = 305376
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 227 ggcatacataaatacatata 246
||||||||||||||||||||
Sbjct: 98108 ggcatacataaatacatata 98089
>dbj| AP001001.5 | Homo sapiens genomic DNA, chromosome 11 clone:RP11-677I18, complete
sequence
Length = 182429
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 181 caacacaaagccttcctcca 200
||||||||||||||||||||
Sbjct: 93368 caacacaaagccttcctcca 93349
>dbj| AP000813.4 | Homo sapiens genomic DNA, chromosome 11q, clone:RP11-822P4, complete
sequence
Length = 210816
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 181 caacacaaagccttcctcca 200
||||||||||||||||||||
Sbjct: 191114 caacacaaagccttcctcca 191095
>gb| AC084416.36 | Mus musculus strain C57BL/6J chromosome 5 clone rp23-430i3, complete
sequence
Length = 183540
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 84561 atacataaatacatatacat 84542
>emb| AL845437.14 | Zebrafish DNA sequence from clone DKEY-98J1 in linkage group 23, complete
sequence
Length = 239084
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 222525 atacataaatacatatacat 222544
>gb| AC111011.6 | Mus musculus BAC clone RP23-424D18 from 1, complete sequence
Length = 201846
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 30812 catacataaatacatataca 30793
>gb| AC147096.3 | Mus musculus BAC clone RP23-448H3 from 14, complete sequence
Length = 198614
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 234 ataaatacatatacattcat 253
||||||||||||||||||||
Sbjct: 137043 ataaatacatatacattcat 137024
>emb| AL928981.7 | Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete
sequence
Length = 110096
Score = 40.1 bits (20), Expect = 7.9
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 227 ggcatacataaatacatatacattcata 254
|||||| || ||||||||||||||||||
Sbjct: 3327 ggcatatatgaatacatatacattcata 3354
>ref| NM_178646.2 | Mus musculus tigger transposable element derived 5 (Tigd5), mRNA
Length = 4778
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 4185 catacataaatacatataca 4166
>dbj| AB208888.1 | Homo sapiens mRNA for Sodium channel protein type II alpha subunit
variant protein
Length = 11847
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 235 taaatacatatacattcata 254
||||||||||||||||||||
Sbjct: 4158 taaatacatatacattcata 4177
>emb| AL928962.9 | Mouse DNA sequence from clone RP23-455A4 on chromosome 2, complete
sequence
Length = 172286
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 114972 atacataaatacatatacat 114991
>gb| U07706.1 |PFU07706 Plasmodium falciparum NF7 dihydropteroate synthetase gene, complete
cds
Length = 3077
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 230 atacataaatacatatacat 249
||||||||||||||||||||
Sbjct: 2893 atacataaatacatatacat 2874
>dbj| AP000888.3 | Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1880F11
Length = 166355
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 22534 catacataaatacatataca 22553
>dbj| AP001576.3 | Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1F5
Length = 105199
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 229 catacataaatacatataca 248
||||||||||||||||||||
Sbjct: 1875 catacataaatacatataca 1856
>emb| AL731648.6 | Mouse DNA sequence from clone RP23-35I10 on chromosome X, complete
sequence
Length = 119995
Score = 40.1 bits (20), Expect = 7.9
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 564 atacatttcaaaactcaaaa 583
||||||||||||||||||||
Sbjct: 23053 atacatttcaaaactcaaaa 23034
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,787,819
Number of Sequences: 3902068
Number of extensions: 6787819
Number of successful extensions: 155232
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 154469
Number of HSP's gapped (non-prelim): 762
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)