Clone Name | rbasd21e14 |
---|---|
Clone Library Name | barley_pub |
>ICI3_HORVU (P08626) Subtilisin-chymotrypsin inhibitor-2B (CI-2B) (Fragment)| Length = 72 Score = 62.4 bits (150), Expect = 5e-10 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 3/67 (4%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWV---DTV 189 C KTEWPELV +++EEA++ I D+P+ + +PVG V +++ RV L+V D + Sbjct: 6 CQNQKTEWPELVEKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNI 65 Query: 188 AEVPRIG 168 A+VPR+G Sbjct: 66 AQVPRVG 72
>ICI2_HORVU (P01053) Subtilisin-chymotrypsin inhibitor-2A (CI-2A)| Length = 83 Score = 62.4 bits (150), Expect = 5e-10 Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 3/63 (4%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWV---DTVAEVP 177 KTEWPELVG+++EEA++ I D+P+ + +PVG V +++ RV L+V D +A+VP Sbjct: 21 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 80 Query: 176 RIG 168 R+G Sbjct: 81 RVG 83
>ICIC_HORVU (P01054) Subtilisin-chymotrypsin inhibitor CI-1C| Length = 77 Score = 61.2 bits (147), Expect = 1e-09 Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 3/65 (4%) Frame = -2 Query: 353 GPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWV---DTVAE 183 G KT WPE+VG + E+A+E I D+P+ + +PV VPL+FN RV++ V TVA+ Sbjct: 13 GAKTSWPEVVGMSAEKAKEIILRDKPNAQIEVIPVDAMVPLNFNPNRVFVLVHKATTVAZ 72 Query: 182 VPRIG 168 V R+G Sbjct: 73 VSRVG 77
>ICIW_WHEAT (P82977) Subtilisin-chymotrypsin inhibitor WSCI| Length = 72 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 3/63 (4%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDT---VAEVP 177 KTEWPELVG+++EEA++ I D+ + + +PVG V +++ RV L+VD+ +A+VP Sbjct: 10 KTEWPELVGKSVEEAKKVILQDKSEAQIVVLPVGTIVTMEYRIDRVRLFVDSLDKIAQVP 69 Query: 176 RIG 168 R+G Sbjct: 70 RVG 72
>ICIB_HORVU (P16063) Subtilisin-chymotrypsin inhibitor CI-1B| Length = 83 Score = 59.7 bits (143), Expect = 3e-09 Identities = 28/62 (45%), Positives = 39/62 (62%) Frame = -2 Query: 353 GPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDTVAEVPR 174 G K WPE+VG + E+A+E I D+PD + +PV VPLDFN R+++ V VA P Sbjct: 23 GAKRSWPEVVGMSAEKAKEIILRDKPDAQIEVIPVDAMVPLDFNPNRIFILV-AVARTPT 81 Query: 173 IG 168 +G Sbjct: 82 VG 83
>ICI_LUMTE (P83472) Chymotrypsin inhibitor precursor (LTCI)| Length = 86 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 3/63 (4%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVD---TVAEVP 177 KT WPELVG T+EEA+ +I DRPD + P V D+ RV ++V+ VAE P Sbjct: 24 KTSWPELVGETLEEAKAQILEDRPDAVIKVQPEHSPVTYDYRPSRVIIFVNKDGNVAETP 83 Query: 176 RIG 168 G Sbjct: 84 AAG 86
>ICI1_PHAAN (P16064) Subtilisin inhibitor 1 (Subtilisin inhibitor I) (ASI-I)| [Contains: Subtilisin inhibitor 2 (Subtilisin inhibitor II) (ASI-II)] Length = 92 Score = 52.4 bits (124), Expect = 6e-07 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVD---TVAEVP 177 KT WPELVG T E+A KIK + D+ + P V D+N KRV L+VD V P Sbjct: 30 KTSWPELVGVTAEQAETKIKEEMVDVQIQVSPHDSFVTADYNPKRVRLYVDESNKVTRTP 89 Query: 176 RIG 168 IG Sbjct: 90 SIG 92
>ICIA_HORVU (P16062) Subtilisin-chymotrypsin inhibitor CI-1A| Length = 83 Score = 51.2 bits (121), Expect = 1e-06 Identities = 26/60 (43%), Positives = 38/60 (63%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDTVAEVPRIG 168 KT WPE+VG + E+A+E I D+P+ V +PV V L+F+ RV++ V VA P +G Sbjct: 25 KTSWPEVVGMSAEKAKEIILRDKPNAQVEVIPVDAMVHLNFDPNRVFVLV-AVARTPTVG 83
>ICI1_CANLI (P81712) Subtilisin inhibitor CLSI-I| Length = 65 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/58 (48%), Positives = 35/58 (60%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDTVAEVPR 174 KT WPELVG T EEA EKIK + + + VP G V D+ +RV L+VD +V R Sbjct: 4 KTSWPELVGVTAEEA-EKIKEEMSGVEIQVVPPGSFVTADYKPQRVRLYVDESNKVTR 60
>ICIS_VICFA (P08820) Subtilisin inhibitor (Fragment)| Length = 62 Score = 47.0 bits (110), Expect = 2e-05 Identities = 26/58 (44%), Positives = 35/58 (60%) Frame = -2 Query: 347 KTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDTVAEVPR 174 +T WPELVG + EEAR KIK + P+ + VP V D+ +RV L+VD +V R Sbjct: 1 RTSWPELVGVSAEEAR-KIKEEMPEAEIQVVPQDSFVTADYKFQRVRLYVDESNKVVR 57
>ITR1_NICSY (Q02214) Trypsin inhibitor 1 precursor (Trypsin inhibitor I)| (NSTI-I) Length = 94 Score = 42.7 bits (99), Expect = 4e-04 Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 5/69 (7%) Frame = -2 Query: 359 CDGPKTE-WPELVGRTIEEAREKIKADRPDLT-VNPVPVGDAVPLDFNEKRVWLWV---D 195 C G K E WPEL+G + ARE I+ + LT V V G V DF +RV L+V D Sbjct: 26 CPGNKKETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLFVNVLD 85 Query: 194 TVAEVPRIG 168 V ++PR+G Sbjct: 86 FVVQIPRVG 94
>BGIA_MOMCH (P24076) Glu S.griseus protease inhibitor (BGIA)| Length = 68 Score = 41.2 bits (95), Expect = 0.001 Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 3/67 (4%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWV---DTV 189 C G K WP+LVG T A+ I+ + P + V VG V DF RV +WV V Sbjct: 3 CQG-KRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWVTERGIV 61 Query: 188 AEVPRIG 168 A P IG Sbjct: 62 ARPPAIG 68
>ICIC_HIRME (P01051) Eglin C| Length = 70 Score = 37.7 bits (86), Expect = 0.014 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = -2 Query: 338 WPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLW----VDTVAEVPRI 171 +PE+VG+T+++ARE P V +P G V LD RV ++ + V VP + Sbjct: 10 FPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHV 69 Query: 170 G 168 G Sbjct: 70 G 70
>ICI_EISHO (P83830) Chymotrypsin inhibitor (EHCI) (Fragment)| Length = 41 Score = 37.4 bits (85), Expect = 0.018 Identities = 17/33 (51%), Positives = 21/33 (63%) Frame = -2 Query: 362 PCDGPKTEWPELVGRTIEEAREKIKADRPDLTV 264 P K WPELVG+T EEAR +I D+P+ V Sbjct: 2 PAVQEKAAWPELVGKTPEEARAQILLDKPNANV 34
>ICI_LINUS (P82381) Proteinase inhibitor (LUTI)| Length = 69 Score = 37.0 bits (84), Expect = 0.024 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = -2 Query: 368 SKPCDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVD-- 195 S+ C G K WPELVG++ A ++ + ++ + G A+ DF RVW+ V+ Sbjct: 1 SRRCPG-KNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 59 Query: 194 -TVAEVPRI 171 V VP I Sbjct: 60 GVVTSVPHI 68
>ICI1_LYCES (P05118) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 36.2 bits (82), Expect = 0.041 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%) Frame = -2 Query: 392 LSHFVSNMSKPCDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPV-GDAVPLDFNEK 216 L F SN+ C+G K WPEL+G + A+E I+ + P +T P+ + G + LD+ Sbjct: 36 LKEFDSNLM--CEG-KQMWPELIGVPTKLAKEIIEKENPSITNIPILLSGSPITLDYLCD 92 Query: 215 RVWLW 201 RV L+ Sbjct: 93 RVRLF 97
>ICIA_SOLTU (P01052) Chymotrypsin inhibitor I, A, B and C subunits| Length = 71 Score = 36.2 bits (82), Expect = 0.041 Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 4/67 (5%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLT-VNPVPVGDAVPLDFNEKRVWLWVD---T 192 CDG K +WPEL+G + A+E I+ ++ V+ + G V +DF RV L+ D + Sbjct: 5 CDG-KLQWPELIGVPTKLAKEIIEKQNSLISNVHILLNGSPVTMDFRCNRVRLFDDILGS 63 Query: 191 VAEVPRI 171 V ++PR+ Sbjct: 64 VVQIPRV 70
>ITH5_CUCMA (P19873) Inhibitor of trypsin and hageman factor (CMTI-V)| Length = 68 Score = 35.8 bits (81), Expect = 0.054 Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVD---TV 189 C G K+ WP LVG A+ I+ P++ + G V DF RV +WV+ V Sbjct: 3 CPG-KSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLV 61 Query: 188 AEVPRIG 168 PRIG Sbjct: 62 VSPPRIG 68
>ICI1_LYCPE (P16231) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) Length = 111 Score = 34.7 bits (78), Expect = 0.12 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPV-GDAVPLDFNEKRVWLWVDTVAE 183 C G K WPEL+G A+ I+ + P +T P+ + G V DF RV L+V+ + + Sbjct: 45 CKG-KQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNILGD 103 Query: 182 VPRI 171 V +I Sbjct: 104 VVQI 107
>ATSI_AMACA (P80211) Trypsin/subtilisin inhibitor (ATSI)| Length = 69 Score = 34.7 bits (78), Expect = 0.12 Identities = 22/65 (33%), Positives = 31/65 (47%) Frame = -2 Query: 368 SKPCDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNEKRVWLWVDTV 189 ++ C G K EWPELVG +A I+ + P++ DF RVW+ VD+ Sbjct: 1 ARECPG-KQEWPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDST 59 Query: 188 AEVPR 174 V R Sbjct: 60 GVVVR 64
>MTSS1_MOUSE (Q8R1S4) Metastasis suppressor protein 1 (Missing in metastasis| protein) Length = 759 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -2 Query: 371 MSKPCDGPKTEWPELVGRTIEEAR-EKIKADRPDLTVNPVPVGDAVPLDFNEK 216 ++ P GPK PE + I E+ E + D P TV+P P+ ++ P D + + Sbjct: 675 VNPPLPGPKPSIPEEHRQAIPESEAEDQERDPPSATVSPGPIPESDPADLSPR 727
>ICID_SOLTU (P08454) Wound-induced proteinase inhibitor 1 precursor| (Wound-induced proteinase inhibitor I) (Chymotrypsin inhibitor I, D subunit) Length = 107 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = -2 Query: 359 CDGPKTEWPELVGRTIEEAREKIKADRPDLT-VNPVPVGDAVPLDFNEKRVWLW---VDT 192 C+G K WPEL+G + A+ I+ + +T V + G V +D+ RV L+ + Sbjct: 41 CNG-KQRWPELIGVPTKLAKGIIEKENSLITNVQILLNGSPVTMDYRCNRVRLFDNILGD 99 Query: 191 VAEVPRI 171 V ++PR+ Sbjct: 100 VVQIPRV 106
>TRH_HUMAN (P20396) Thyroliberin precursor [Contains: Prothyroliberin;| Thyroliberin (Thyrotropin-releasing hormone) (TRH) (Thyrotropin-releasing factor) (TRF) (TSH-releasing factor) (Protirelin)] Length = 242 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/72 (27%), Positives = 28/72 (38%) Frame = -1 Query: 378 FQHEQTMRRSQDGVA*AGRAHDRGGEREDQGGPAGPHRESCPSRRCRAT*LQREARLALG 199 FQ + +R G E E++GG GPH+ P RR + Sbjct: 75 FQSDWLSKRQHPGKREEEEEEGVEEEEEEEGGAVGPHKRQHPGRREDEASWSVDVTQHKR 134 Query: 198 RHGGGSSPHWLS 163 +H G SP WL+ Sbjct: 135 QHPGRRSP-WLA 145
>CP4X1_RAT (Q8K4D6) Cytochrome P450 4X1 (EC 1.14.14.1) (CYPIVX1)| Length = 507 Score = 29.6 bits (65), Expect = 3.8 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 6/74 (8%) Frame = +1 Query: 169 PMRGTSATVSTQSQTRFSLKSSGTASPTGTGFTVRSGRSALI-----FSLASSIVRPTS- 330 P+R T + F SSG + G F + + A+ F +A+ + RP + Sbjct: 426 PLRFTKENSEQRHPCAFLPFSSGPRNCIGQQFAMLELKVAIALTLLRFRVAADLTRPPAF 485 Query: 331 SGHSVLGPSHGLLM 372 S H+VL P HG+ + Sbjct: 486 SSHTVLRPKHGIYL 499
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 29.3 bits (64), Expect = 5.0 Identities = 21/62 (33%), Positives = 32/62 (51%) Frame = +1 Query: 175 RGTSATVSTQSQTRFSLKSSGTASPTGTGFTVRSGRSALIFSLASSIVRPTSSGHSVLGP 354 + +S++ S S + +L SS +ASPT + S AL S +S + +SSG S Sbjct: 90 QSSSSSASLTSSSSATLTSSSSASPTSS-----SSSHALSSSSSSLVASSSSSGMSSSSL 144 Query: 355 SH 360 SH Sbjct: 145 SH 146
>Y575_WOLSU (Q7M9Z1) UPF0323 lipoprotein WS0575 precursor| Length = 217 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = +1 Query: 202 QSQTRFSLKSSGTA---SPTGTGFTVRSGRSALIFSLASSIVRPTSSGHSVLGPSHG 363 +SQ F SS TA + TG T S + S +S P+SS S PS+G Sbjct: 160 RSQNSFKSSSSATAPRGTSTGASSTPSSAKGGYFGSSSSPSSAPSSSSSSSSSPSYG 216
>STRD_STRGR (P08075) Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)| (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) (Sugar-nucleotidylation enzyme) Length = 355 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -2 Query: 419 TGNTTACSRLSHFVSNMSKP-CDGPKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVG 246 TGN T ++ V ++P CDG E +L+GR + E +++ R + P +G Sbjct: 221 TGNVTDMLEVNRLVLETTEPRCDGLVDERSDLIGRVLVEEGAEVRNSR---VMGPTVIG 276
>COAT_JCDNV (Q90053) Coat protein VP1 (Structural protein VP1) [Contains: Coat| protein VP (Structural protein VP2); Coat protein VP3 (Structural protein VP3); Coat protein VP4 (Structural protein VP4)] Length = 810 Score = 28.9 bits (63), Expect = 6.6 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 23/107 (21%) Frame = +1 Query: 142 ADYNL*AA*PMRGTSATVSTQSQTRFSLKSSGTASPTGTGFTVRSGRSA----------- 288 A +N P +S+ +T ++ GT S T +G SG+ Sbjct: 347 APHNSQGTDPQNPSSSGATTSXDVEMAMSLPGTGSGTSSGGGNTSGQEVYVIPRPFSNFG 406 Query: 289 ------------LIFSLASSIVRPTSSGHSVLGPSHGLLMLETKWDK 393 +IF LA++++ PT +G + + + E W K Sbjct: 407 KKLSTYTKSHKFMIFGLANNVIGPTGTGTTAVNRLITTCLAEIPWQK 453
>FA43B_HUMAN (Q6ZT52) Protein FAM43B| Length = 329 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -2 Query: 380 VSNMSKPCDGPKTEWP-ELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPL 231 +S+ + C +WP E +GR R+K++ ++ D T +G+AV L Sbjct: 33 LSSFLRSCPDLLPDWPLERLGRVFRSRRQKVELNKEDPTYTVWYLGNAVTL 83
>NCCA_ALCXX (Q44586) Nickel-cobalt-cadmium resistance protein nccA| Length = 1076 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -2 Query: 350 PKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNE 219 PK+EWPE + T E+ E+I+ + N V + + FNE Sbjct: 657 PKSEWPEGI-TTKEQVIERIREKTAPMVSNNYDVTQPIQMRFNE 699
>CNRA_RALME (P37972) Nickel and cobalt resistance protein cnrA| Length = 1075 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = -2 Query: 350 PKTEWPELVGRTIEEAREKIKADRPDLTVNPVPVGDAVPLDFNE 219 PK+EWPE V T E+ E+I+ + N V + + FNE Sbjct: 656 PKSEWPEGV-TTKEQVIERIREKTAPMVGNNYDVTQPIEMRFNE 698
>ARN1_YEAST (P38731) Siderophore iron transporter ARN1 (Ferrichrome permease)| Length = 627 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 54 YIFQVIPTLIY*TDYNWMMWRLAWVFIPVG*L*FISSLANAGNFRHRVDP 203 Y+ ++ LI +D++ + WRL + F+P FI + AGN R +P Sbjct: 177 YVGVILILLIILSDFSSLKWRLLYQFVPT--WPFIINTWIAGNITSRANP 224
>GUNB_PAELA (P23550) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) (EG-B) Length = 566 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/55 (34%), Positives = 29/55 (52%) Frame = +1 Query: 172 MRGTSATVSTQSQTRFSLKSSGTASPTGTGFTVRSGRSALIFSLASSIVRPTSSG 336 ++ TS ++ T SL +GT +GT +T+ S R L F AS + + TS G Sbjct: 384 VKDTSVQLNLNGNTLTSLSVNGTTLKSGTDYTLNSSR--LTFK-ASQLTKLTSLG 435
>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)| Length = 633 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = -1 Query: 345 DGVA*AGRAHDRGGEREDQGGPAGPHRESCPSRRCRAT*LQREARLA--LGRHGGGSSP 175 DG A GR GG R +G P P P R RA QR A L G GG P Sbjct: 495 DGYAVRGR----GGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGP 549
>GLYA_LACPL (Q88UT5) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 412 Score = 28.5 bits (62), Expect = 8.6 Identities = 12/34 (35%), Positives = 22/34 (64%), Gaps = 1/34 (2%) Frame = +1 Query: 325 TSSGHSVL-GPSHGLLMLETKWDKRLQAVVFPVN 423 T++ H L GP G+++ + K+ K++ + VFP N Sbjct: 220 TTTTHKTLRGPRGGMILAKEKYGKKINSAVFPGN 253 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,913,338 Number of Sequences: 219361 Number of extensions: 1409038 Number of successful extensions: 4578 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4345 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4570 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)