ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20p07 |
|---|---|
| Clone Library Name | barley_pub |
>PMA1_WHEAT (P83970) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| Length = 951 Score = 200 bits (509), Expect = 3e-51 Identities = 100/101 (99%), Positives = 100/101 (99%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 DNL QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE Sbjct: 851 DNLLQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 910 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV Sbjct: 911 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 951
>PMA4_NICPL (Q03194) Plasma membrane ATPase 4 (EC 3.6.3.6) (Proton pump 4)| Length = 952 Score = 158 bits (400), Expect = 1e-38 Identities = 81/101 (80%), Positives = 91/101 (90%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 +NL NKTAFTTK++YGK EREAQWA AQRTLHGLQ PE + LFN+K+SYRELSEIAE Sbjct: 854 NNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATN--LFNEKNSYRELSEIAE 911 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 QAKRRAE+ARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 912 QAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>PMA5_ARATH (Q9SJB3) ATPase 5, plasma membrane-type (EC 3.6.3.6) (Proton pump 5)| Length = 948 Score = 154 bits (389), Expect = 2e-37 Identities = 77/100 (77%), Positives = 88/100 (88%) Frame = -3 Query: 644 NLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQ 465 NL +NKTAFTTK++YGK EREAQWA AQRTLHGLQ E + +FN+K+SY ELS+IAEQ Sbjct: 851 NLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAE--KNNIFNEKNSYSELSQIAEQ 908 Query: 464 AKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 AKRRAE+ RLRE+NTLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 909 AKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA9_ARATH (Q42556) ATPase 9, plasma membrane-type (EC 3.6.3.6) (Proton pump 9)| Length = 954 Score = 150 bits (378), Expect = 4e-36 Identities = 74/101 (73%), Positives = 89/101 (88%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 DN+ +NKTAFT+K++YGKGEREAQWA AQRTLHGLQ + + +FNDKS+YRELSEIA+ Sbjct: 856 DNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTSD--MFNDKSTYRELSEIAD 913 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 QAKRRAE+ARLRE +TLKGHVESVVK KGLDI+ I Q+YT+ Sbjct: 914 QAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
>PMA6_ARATH (Q9SH76) ATPase 6, plasma membrane-type (EC 3.6.3.6) (Proton pump 6)| Length = 949 Score = 149 bits (377), Expect = 5e-36 Identities = 72/101 (71%), Positives = 90/101 (89%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 +N+ +N+TAFTTK++YG+GEREAQWA AQRTLHGL+ PE ++F D ++Y ELSEIAE Sbjct: 853 NNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPE----SMFEDTATYTELSEIAE 908 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 QAK+RAE+ARLRE++TLKGHVESVVKLKGLDID +NQ+YTV Sbjct: 909 QAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
>PMA8_ARATH (Q9M2A0) ATPase 8, plasma membrane-type (EC 3.6.3.6) (Proton pump 8)| Length = 948 Score = 147 bits (371), Expect = 3e-35 Identities = 77/101 (76%), Positives = 85/101 (84%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 DN+ KTAFTTK++YGKGEREAQWA AQRTLHGL PE +FND + ELSEIAE Sbjct: 854 DNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPE----AMFNDNKN--ELSEIAE 907 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 QAKRRAE+ARLREL+TLKGHVESVVKLKGLDIDTI Q+YTV Sbjct: 908 QAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
>PMA1_ARATH (P20649) ATPase 1, plasma membrane-type (EC 3.6.3.6) (Proton pump 1)| Length = 948 Score = 145 bits (365), Expect = 1e-34 Identities = 75/100 (75%), Positives = 84/100 (84%) Frame = -3 Query: 644 NLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQ 465 +L N+TAFTTK++YG GEREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQ Sbjct: 851 SLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDVN--IFPEKGSYRELSEIAEQ 908 Query: 464 AKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 AKRRAEIARLREL+TLKGHVESV KLKGLDIDT +YTV Sbjct: 909 AKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 948
>PMA2_ARATH (P19456) ATPase 2, plasma membrane-type (EC 3.6.3.6) (Proton pump 2)| Length = 947 Score = 141 bits (356), Expect = 1e-33 Identities = 76/100 (76%), Positives = 85/100 (85%) Frame = -3 Query: 644 NLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQ 465 NL +NKTAFT K++YGK EREAQWA AQRTLHGLQ E + +F +K SYRELSEIAEQ Sbjct: 851 NLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAVN--IFPEKGSYRELSEIAEQ 908 Query: 464 AKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 909 AKRRAEIARLRELHTLKGHVESVVKLKGLDIET-PSHYTV 947
>PMA3_ARATH (P20431) ATPase 3, plasma membrane-type (EC 3.6.3.6) (Proton pump 3)| Length = 948 Score = 134 bits (336), Expect = 3e-31 Identities = 72/100 (72%), Positives = 82/100 (82%) Frame = -3 Query: 644 NLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQ 465 N+ N+TAFTTK+NYG EREAQWA AQRTLHGLQ E A+ + ++ YRELSEIA Q Sbjct: 852 NIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETAN--VVPERGGYRELSEIANQ 909 Query: 464 AKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 AKRRAEIARLREL+TLKGHVESVVKLKGLDI+T +YTV Sbjct: 910 AKRRAEIARLRELHTLKGHVESVVKLKGLDIETAG-HYTV 948
>PMA3_NICPL (Q08436) Plasma membrane ATPase 3 (EC 3.6.3.6) (Proton pump 3)| Length = 956 Score = 130 bits (328), Expect = 3e-30 Identities = 64/101 (63%), Positives = 84/101 (83%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT K+++GK +RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE Sbjct: 859 DLVIEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAE 915 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 916 EAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 956
>PMA1_LYCES (P22180) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 956 Score = 130 bits (326), Expect = 4e-30 Identities = 64/101 (63%), Positives = 84/101 (83%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT K+++GK RE QWA AQRTLHGLQ P+P +F++ +++ EL+++AE Sbjct: 859 DLVLEQRIAFTRKKDFGKELRELQWAHAQRTLHGLQVPDPK---IFSETTNFNELNQLAE 915 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 916 EAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQSYTV 956
>PMA1_NICPL (Q08435) Plasma membrane ATPase 1 (EC 3.6.3.6) (Proton pump 1)| Length = 957 Score = 128 bits (322), Expect = 1e-29 Identities = 64/101 (63%), Positives = 83/101 (82%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE Sbjct: 860 DLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDTK---LFSEATNFNELNQLAE 916 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIARLREL+TLKGHVESVVKLKGLDI+TI Q YTV Sbjct: 917 EAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYTV 957
>PMA11_ARATH (Q9LV11) ATPase 11, plasma membrane-type (EC 3.6.3.6) (Proton pump| 11) Length = 956 Score = 127 bits (318), Expect = 4e-29 Identities = 63/101 (62%), Positives = 83/101 (82%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F +++ + ELS++AE Sbjct: 859 DLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAK---MFPERTHFNELSQMAE 915 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 916 EAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 956
>PMA2_LYCES (P23980) Plasma membrane ATPase 2 (EC 3.6.3.6) (Proton pump 2)| (Fragment) Length = 704 Score = 126 bits (317), Expect = 5e-29 Identities = 63/101 (62%), Positives = 83/101 (82%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT K+++GK +RE QWA AQRTLHGLQ P+ LF++ +++ EL+++AE Sbjct: 607 DLVLEQRIAFTRKKDFGKEQRELQWAHAQRTLHGLQVPDIK---LFSEATNFNELNQLAE 663 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIAR REL+TLKGHVESVVKLKGLDI+TI Q+YTV Sbjct: 664 EAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYTV 704
>PMA4_ARATH (Q9SU58) ATPase 4, plasma membrane-type (EC 3.6.3.6) (Proton pump 4)| Length = 960 Score = 126 bits (316), Expect = 6e-29 Identities = 63/101 (62%), Positives = 82/101 (81%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + + AFT ++++GK +RE QWA AQRTLHGLQAP+ +F D++ EL+++AE Sbjct: 863 DLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDTK---MFTDRTHVSELNQMAE 919 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 +AKRRAEIARLREL+TLKGHVESVV+LKGLDI+TI Q YTV Sbjct: 920 EAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYTV 960
>PMA7_ARATH (Q9LY32) ATPase 7, plasma membrane-type (EC 3.6.3.6) (Proton pump 7)| Length = 961 Score = 97.8 bits (242), Expect = 2e-20 Identities = 51/102 (50%), Positives = 71/102 (69%), Gaps = 1/102 (0%) Frame = -3 Query: 647 DNLXQNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAE 468 D + + +TA T K+N+G+ ER A WAT +RT HGL+ + + +++S EL+ +AE Sbjct: 864 DRMVEGRTALTGKKNFGQEERMAAWATEKRTQHGLETGQKPVY----ERNSATELNNMAE 919 Query: 467 QAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIN-QNYTV 345 +AKRRAEIAR+REL TLKG VES KLKG D++ N NYT+ Sbjct: 920 EAKRRAEIARMRELQTLKGKVESAAKLKGYDLEDPNSNNYTI 961
>PMA10_ARATH (Q43128) ATPase 10, plasma membrane-type (EC 3.6.3.6) (Proton pump| 10) Length = 947 Score = 59.7 bits (143), Expect = 7e-09 Identities = 38/95 (40%), Positives = 53/95 (55%) Frame = -3 Query: 629 KTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRA 450 KTAFT K++YGK + +QR S + + S S IAEQ +RRA Sbjct: 864 KTAFTYKKDYGKDDGSPNVTISQR-----------SRSAEELRGSRSRASWIAEQTRRRA 912 Query: 449 EIARLRELNTLKGHVESVVKLKGLDIDTINQNYTV 345 EIARL E++++ H+ESV+KLK +D I +TV Sbjct: 913 EIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
>PMA_AVESA (Q7M290) Plasma membrane ATPase (EC 3.6.3.6) (Proton pump)| (Fragments) Length = 110 Score = 43.9 bits (102), Expect = 4e-04 Identities = 26/38 (68%), Positives = 27/38 (71%) Frame = -3 Query: 572 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAK 459 A A +TLHGLQAPE S L NDK ELSEIAEQAK Sbjct: 77 APALKTLHGLQAPESTSLNLPNDK----ELSEIAEQAK 110
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 3/81 (3%) Frame = -3 Query: 584 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 414 E Q Q L +Q PEPA L D REL E + K+R E R REL LK Sbjct: 436 ETQVMELQNKLKHVQGPEPAKEVLLKDLLETRELLEEVLEGKQRVEEQLRLRERELTALK 495 Query: 413 GHVESVVKLKGLDIDTINQNY 351 G ++ V + +++ + Q Y Sbjct: 496 GALKEEVASRDQEVEHVRQQY 516
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 34.3 bits (77), Expect = 0.33 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = -3 Query: 584 EAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAE---IARLRELNTLK 414 EAQ Q L Q+P+ +L D REL E + K+R E R REL LK Sbjct: 430 EAQVKELQLKLKHSQSPDSGKESLLKDLLDTRELLEELLEGKQRVEEQLRLRERELTALK 489 Query: 413 GHVESVVKLKGLDIDTINQNY 351 G ++ V +++ + Y Sbjct: 490 GALKEEVASHDQEVEHVRLQY 510
>ESC1_SCHPO (Q04635) Protein esc1| Length = 413 Score = 30.8 bits (68), Expect = 3.6 Identities = 28/101 (27%), Positives = 44/101 (43%) Frame = -1 Query: 649 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 470 G++S + P TT++ +HS +PHR L+ T SS+T VS S+ Sbjct: 115 GSSSSYVYSVPPTNSTTSQASAKHSAVPHRSSQFQSTTLTPSTTDSSST---DVSSSDSV 171 Query: 469 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTP 347 S SS+++ T+S +TS S+ TP Sbjct: 172 STS---------ASSSNASNTVS-------VTSPASSSATP 196
>ASPP2_HUMAN (Q13625) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53-binding protein 2) (p53BP2) (53BP2) (Bcl2-binding protein) (Bbp) (NY-REN-51 antigen) Length = 1128 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -3 Query: 572 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 393 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 150 ATKEQRLKFLKQQDQRQQQQVAEQEKLKRLKEIAENQE-----AKLKKVRALKGHVEQKR 204 Query: 392 KLKGLDIDTINQ 357 G ++ I Q Sbjct: 205 LSNGKLVEEIEQ 216
>GCM2_MOUSE (O09102) Chorion-specific transcription factor GCMb (Glial cells| missing homolog 2) (GCM motif protein 2) (mGCMb) Length = 504 Score = 30.0 bits (66), Expect = 6.2 Identities = 15/61 (24%), Positives = 28/61 (45%) Frame = -3 Query: 554 LHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLD 375 +H PE S T + R+++ + KRR+E R ++GH+ S L+ + Sbjct: 156 VHDHPRPESKSETEGRRSALKRQMASFYQPQKRRSEEPEARSTQDIRGHLNSTAALEPTE 215 Query: 374 I 372 + Sbjct: 216 L 216
>SMG_DROME (Q23972) Protein Smaug| Length = 999 Score = 30.0 bits (66), Expect = 6.2 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -2 Query: 360 PKLHRVRNLGIGPNNMTSVLERDWNG 283 PK+H V+ G+GPNN ++ + WNG Sbjct: 769 PKMHHVKPAGVGPNN-GNINKPRWNG 793
>RSRC1_MOUSE (Q9DBU6) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 30.0 bits (66), Expect = 6.2 Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Frame = -3 Query: 635 QNKTAFTTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYREL-SEIAEQAK 459 + K + + GK R + + RT P P SH+ +++SS+R S ++ + Sbjct: 79 RRKRSRSRSRGRGKPYRVQRSRSKSRTRRSRSRPRPRSHSRSSERSSHRRTRSRSRDRDR 138 Query: 458 RRAEIARLRELNTLKGHVESVVKLKGLDIDTI 363 R+ RE KG + V +K D I Sbjct: 139 RKVRDKEKREKEKDKGKDKEVHSIKRGDSGNI 170
>RNH2_SYNP7 (Q31PW0) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 586 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 443 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>RNH2_SYNP6 (Q5N4B8) Ribonuclease HII (EC 3.1.26.4) (RNase HII)| Length = 215 Score = 29.6 bits (65), Expect = 8.0 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = -1 Query: 586 GRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSLSKPREELRL 443 GRH G +H A L P H + FLRSL +P +++ L Sbjct: 174 GRHKGYGTAQHRQAILQLGPTPLH-------RIRFLRSLRQPSQQIDL 214
>TIM_MOUSE (Q9R1X4) Timeless homolog (mTim)| Length = 1197 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%) Frame = -2 Query: 402 VRGEAQGP*HRHHQPKLH-----RVRNLGIGPNNMTSVLERDWNGAP 277 V GE QGP H L R R G+GP + E +WN AP Sbjct: 1112 VPGE-QGPSEEHRTEALRALLSARKRKAGLGPTEEEATGEEEWNSAP 1157
>ASPP2_MOUSE (Q8CG79) Apoptosis-stimulating of p53 protein 2 (Tumor suppressor| p53-binding protein 2) (p53BP2) (53BP2) (Fragment) Length = 1088 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -3 Query: 572 ATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVV 393 AT ++ L L+ + ++ + L EIAE + A+L+++ LKGHVE Sbjct: 110 ATKEQRLKFLKQQDQRQQQQAAEQEKLKRLREIAESQE-----AKLKKVRALKGHVEQKR 164 Query: 392 KLKGLDIDTINQ 357 G ++ I Q Sbjct: 165 LSNGKLVEEIEQ 176
>POLN_SPDV (Q8JJX1) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)| [Contains: P123; mRNA capping enzyme nsP1 (EC 2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1); Protease/triphosphatase/NTPase/helicase nsP2 (EC 3.4.22.-) (EC 3.1.3.33) (EC 3.6.1.1 Length = 2601 Score = 29.6 bits (65), Expect = 8.0 Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 1/120 (0%) Frame = -1 Query: 649 GTTSCRTRLLSPPKRTTAKVRGRHSGLPHREHSMAFKHLSRLPTHSSTTRAATVSFLRSL 470 GT S +R+ S T++ G P R +++ L+ HS + R+A +R+ Sbjct: 1815 GTESRSSRMGSQSSVTSSA--GSVPPAPRRAPAVSAASLAS-SAHSRSVRSAPA--MRAA 1869 Query: 469 SKPREELRLQG*GSSTHSRGTLSPW*SSRALTSTPSTKTTPCEEFGHWTKQHD-IRIGAR 293 S +R GS+ H G S S R + PS+ +TP G Q D +R+ AR Sbjct: 1870 SAGARSVRSAQSGSTGHRAGAFSVAGSVRQPSGPPSSVSTPAAIRGLTRDQFDAVRVRAR 1929
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 29.6 bits (65), Expect = 8.0 Identities = 20/75 (26%), Positives = 35/75 (46%) Frame = -3 Query: 617 TTKENYGKGEREAQWATAQRTLHGLQAPEPASHTLFNDKSSYRELSEIAEQAKRRAEIAR 438 T KE Y K ++++W + T++ L+ +L S + + E+A ++ A Sbjct: 439 TVKEEYNKTVKQSEWDEMKATVNTLR-------SLNKTMKSQMQRMKDREKASQKEHSAV 491 Query: 437 LRELNTLKGHVESVV 393 EL TLK +E V Sbjct: 492 KTELKTLKDQLEKSV 506 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,549,236 Number of Sequences: 219361 Number of extensions: 1953036 Number of successful extensions: 4785 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 4637 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4767 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
