Clone Name | rbasd20p04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear a... | 31 | 1.5 |
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>EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear antigen 3)| (EBNA-3) (EBNA-3A) Length = 812 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +3 Query: 351 QIHYPPLERFLASGQAYPSQIHRQICFHPCPCSQPP 458 Q+ PP A G AYP +H Q PCP +Q P Sbjct: 310 QVPEPPTIHLAAQGMAYP--LHEQHGMAPCPVAQAP 343 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,734,541 Number of Sequences: 219361 Number of extensions: 611207 Number of successful extensions: 1676 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1658 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1675 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)