ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20p03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473064.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
2emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 54 5e-04
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
4dbj|AB117993.1| Oryza sativa (japonica cultivar-group) bip106 mR... 54 5e-04
5dbj|AK068884.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
6dbj|AK068612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 54 5e-04
8ref|XM_466696.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
10dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
11dbj|AB118021.1| Oryza sativa (japonica cultivar-group) bip135 mR... 50 0.008
12dbj|AK072455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
13gb|AY104489.1| Zea mays PCO108349 mRNA sequence 50 0.008
14gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 44 0.51
15gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complet... 42 2.0
16gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromoso... 42 2.0
17gb|AC124306.4| Homo sapiens chromosome 15, clone RP11-275I4, com... 42 2.0
18dbj|AK067965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
19dbj|AK061331.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
20gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, co... 40 7.9
21ref|XM_510372.1| PREDICTED: Pan troglodytes LOC453400 (LOC453400... 40 7.9
22gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, comp... 40 7.9
23ref|XM_610426.2| PREDICTED: Bos taurus similar to solute carrier... 40 7.9
24ref|XM_323154.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
25ref|XM_952880.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.9
26gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosom... 40 7.9
27ref|NM_004212.1| Homo sapiens solute carrier family 28 (sodium-c... 40 7.9
28emb|AL591742.7| Human DNA sequence from clone RP4-590F24 on chro... 40 7.9
29emb|AJ719939.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.9
30emb|CR859018.1| Pongo pygmaeus mRNA; cDNA DKFZp469H151 (from clo... 40 7.9
31ref|NM_001006449.1| Gallus gallus signal recognition particle 72... 40 7.9
32gb|AY957499.1| Bos taurus glutamate-cysteine ligase catalytic su... 40 7.9
33gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complet... 40 7.9
34gb|AC051619.7|AC051619 Homo sapiens chromosome 15 clone CTD-2651... 40 7.9
35gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 40 7.9
36dbj|AK222709.1| Homo sapiens mRNA for solute carrier family 28 (... 40 7.9
37gb|BC093737.1| Homo sapiens solute carrier family 28 (sodium-cou... 40 7.9
38dbj|AP006435.1| Sus scrofa CC chemokine receptor genes (CCR3, C... 40 7.9
39dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CC... 40 7.9
40gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence 40 7.9
41dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
42gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, co... 40 7.9
43gb|BC112047.1| Homo sapiens solute carrier family 28 (sodium-cou... 40 7.9
44gb|AC124474.4| Mus musculus BAC clone RP24-88C10 from 1, complet... 40 7.9
45gb|U84392.1|HSU84392 Human Na+-dependent purine specific transpo... 40 7.9
46gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.9
47gb|AF036109.1|AF036109 Homo sapiens Na+/nucleoside cotransporter... 40 7.9
48dbj|AP008220.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
49gb|AC165416.12| Mus musculus chromosome 3, clone RP23-86I19, com... 40 7.9 
>ref|XM_473064.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2541

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 215  agccttccttctgcgcttctttccagt 241
            |||||||||||||||||||||||||||
Sbjct: 2532 agccttccttctgcgcttctttccagt 2506
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
              complete sequence
          Length = 173171

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 215    agccttccttctgcgcttctttccagt 241
              |||||||||||||||||||||||||||
Sbjct: 135105 agccttccttctgcgcttctttccagt 135131
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                           
Query: 215      agccttccttctgcgcttctttccagt 241
                |||||||||||||||||||||||||||
Sbjct: 25014520 agccttccttctgcgcttctttccagt 25014546
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>dbj|AB117993.1| Oryza sativa (japonica cultivar-group) bip106 mRNA for BRI1-KD
           interacting protein 106, partial cds
          Length = 709

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 215 agccttccttctgcgcttctttccagt 241
           |||||||||||||||||||||||||||
Sbjct: 700 agccttccttctgcgcttctttccagt 674
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>dbj|AK068884.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E10, full
            insert sequence
          Length = 2250

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 215  agccttccttctgcgcttctttccagt 241
            |||||||||||||||||||||||||||
Sbjct: 1887 agccttccttctgcgcttctttccagt 1861
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>dbj|AK068612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155D11, full
            insert sequence
          Length = 3038

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 215  agccttccttctgcgcttctttccagt 241
            |||||||||||||||||||||||||||
Sbjct: 2685 agccttccttctgcgcttctttccagt 2659
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
              sequence
          Length = 148644

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                         
Query: 215    agccttccttctgcgcttctttccagt 241
              |||||||||||||||||||||||||||
Sbjct: 142757 agccttccttctgcgcttctttccagt 142783
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>ref|XM_466696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2870

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 214  aagccttccttctgcgcttctttcc 238
            |||||||||||||||||||||||||
Sbjct: 2529 aagccttccttctgcgcttctttcc 2505



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  aagccttccttctgcgcttcttt 236
            |||||||||||||||||||||||
Sbjct: 2589 aagccttccttctgcgcttcttt 2567
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 214      aagccttccttctgcgcttctttcc 238
                |||||||||||||||||||||||||
Sbjct: 24159656 aagccttccttctgcgcttctttcc 24159680



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 214      aagccttccttctgcgcttcttt 236
                |||||||||||||||||||||||
Sbjct: 24159596 aagccttccttctgcgcttcttt 24159618



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 526      tttccttgacttccttcttaatct 549
                ||||||||| ||||||||||||||
Sbjct: 35945426 tttccttgatttccttcttaatct 35945403
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 214    aagccttccttctgcgcttctttcc 238
              |||||||||||||||||||||||||
Sbjct: 118397 aagccttccttctgcgcttctttcc 118421



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 214    aagccttccttctgcgcttcttt 236
              |||||||||||||||||||||||
Sbjct: 118337 aagccttccttctgcgcttcttt 118359
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>dbj|AB118021.1| Oryza sativa (japonica cultivar-group) bip135 mRNA for BRI1-KD
            interacting protein 135, partial cds
          Length = 1850

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 214  aagccttccttctgcgcttctttcc 238
            |||||||||||||||||||||||||
Sbjct: 1481 aagccttccttctgcgcttctttcc 1457



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  aagccttccttctgcgcttcttt 236
            |||||||||||||||||||||||
Sbjct: 1541 aagccttccttctgcgcttcttt 1519
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>dbj|AK072455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I24, full
            insert sequence
          Length = 2870

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 214  aagccttccttctgcgcttctttcc 238
            |||||||||||||||||||||||||
Sbjct: 2529 aagccttccttctgcgcttctttcc 2505



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 214  aagccttccttctgcgcttcttt 236
            |||||||||||||||||||||||
Sbjct: 2589 aagccttccttctgcgcttcttt 2567
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>gb|AY104489.1| Zea mays PCO108349 mRNA sequence
          Length = 553

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 214 aagccttccttctgcgcttctttcc 238
           |||||||||||||||||||||||||
Sbjct: 197 aagccttccttctgcgcttctttcc 173
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 227   gcgcttctttccagttgaagac 248
             ||||||||||||||||||||||
Sbjct: 56117 gcgcttctttccagttgaagac 56096
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>gb|AC092424.4| Homo sapiens BAC clone RP13-572K6 from 7, complete sequence
          Length = 82435

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 532  tgacttccttcttaatctcgc 552
            |||||||||||||||||||||
Sbjct: 5814 tgacttccttcttaatctcgc 5794
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>gb|AC148836.6| Pan troglodytes BAC clone CH251-2C8 from chromosome 7, complete
             sequence
          Length = 219717

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 532   tgacttccttcttaatctcgc 552
             |||||||||||||||||||||
Sbjct: 53775 tgacttccttcttaatctcgc 53755
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>gb|AC124306.4| Homo sapiens chromosome 15, clone RP11-275I4, complete sequence
          Length = 160846

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 474   ctgtctttagctaaatcatccttcatctt 502
             ||||||| ||||||| |||||||||||||
Sbjct: 84233 ctgtcttcagctaaaacatccttcatctt 84205
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>dbj|AK067965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124G04, full
           insert sequence
          Length = 1354

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 526 tttccttgacttccttcttaatctc 550
           ||||||||| |||||||||||||||
Sbjct: 487 tttccttgatttccttcttaatctc 463
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>dbj|AK061331.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-A06, full
           insert sequence
          Length = 1287

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 526 tttccttgacttccttcttaatctc 550
           ||||||||| |||||||||||||||
Sbjct: 389 tttccttgatttccttcttaatctc 365
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>gb|AC114644.10| Mus musculus chromosome 1, clone RP24-128L10, complete sequence
          Length = 137391

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   ttttccttgacttccttctt 544
             ||||||||||||||||||||
Sbjct: 16310 ttttccttgacttccttctt 16329
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>ref|XM_510372.1| PREDICTED: Pan troglodytes LOC453400 (LOC453400), mRNA
          Length = 1977

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 931 agatgtttcctgccacagcc 912
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>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence
          Length = 170731

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    ttttccttgacttccttctt 544
              ||||||||||||||||||||
Sbjct: 147965 ttttccttgacttccttctt 147984
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>ref|XM_610426.2| PREDICTED: Bos taurus similar to solute carrier family 28
           (sodium-coupled nucleoside transporter), member 2
           (LOC531921), mRNA
          Length = 2333

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 847 agatgtttcctgccacagcc 828
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>ref|XM_323154.1| Neurospora crassa OR74A hypothetical protein (NCU10036.1) partial
            mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 524  tttttccttgacttccttct 543
            ||||||||||||||||||||
Sbjct: 1584 tttttccttgacttccttct 1565
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>ref|XM_952880.1| Neurospora crassa OR74A hypothetical protein (NCU10036.1) partial
            mRNA
          Length = 2160

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 524  tttttccttgacttccttct 543
            ||||||||||||||||||||
Sbjct: 1584 tttttccttgacttccttct 1565
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>gb|AC127342.3| Mus musculus BAC clone RP23-191B18 from chromosome 18, complete sequence
          Length = 185210

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    atccttgcccttgctcccaa 450
              ||||||||||||||||||||
Sbjct: 127701 atccttgcccttgctcccaa 127682
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>ref|NM_004212.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside
           transporter), member 2 (SLC28A2), mRNA
          Length = 2459

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 990 agatgtttcctgccacagcc 971
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>emb|AL591742.7| Human DNA sequence from clone RP4-590F24 on chromosome 1 Contains the
             3' end of the gene for HNOEL-iso protein (HNOEL-iso) and a
             ribosomal protein L13a (RPL13A) pseudogene, complete
             sequence
          Length = 86049

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 458   aagcttctggttgctgctgt 477
             ||||||||||||||||||||
Sbjct: 80877 aagcttctggttgctgctgt 80896
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>emb|AJ719939.1| Gallus gallus mRNA for hypothetical protein, clone 8j15
          Length = 2157

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  ccagtcagcagacagacaaa 106
           ||||||||||||||||||||
Sbjct: 366 ccagtcagcagacagacaaa 385
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>emb|CR859018.1| Pongo pygmaeus mRNA; cDNA DKFZp469H151 (from clone DKFZp469H151)
          Length = 2403

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 217 ccttccttctgcgcttcttt 236
           ||||||||||||||||||||
Sbjct: 503 ccttccttctgcgcttcttt 484
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>ref|NM_001006449.1| Gallus gallus signal recognition particle 72kDa (SRP72), mRNA
          Length = 2157

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 87  ccagtcagcagacagacaaa 106
           ||||||||||||||||||||
Sbjct: 366 ccagtcagcagacagacaaa 385
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>gb|AY957499.1| Bos taurus glutamate-cysteine ligase catalytic subunit (GCLC), MHC class
              II antigen (DSB), MHC class II antigen (DYA), MHC class II
              antigen (DYB), MHC class II antigen (DOB), transporter 2
              ATP-binding cassette sub-family B (TAP2), proteasome
              subunit beta type 8 (PSMB8), transporter 1 ATP-binding
              cassette sub-family B (TAP1), proteosome subunit beta type
              9 (PSMB9), histone H2B-like (H2B), MHC class II antigen
              (DMB), MHC class II antigen (DMA), bromodomain containing 2
              (BRD2), MHC class II antigen (DOA), collagen type XI alpha
              2 (COL11A2), retinoid X receptor beta (RXRB), solute
              carrier family 39 zinc transporter member 7 (HKE4), and
              hydroxysteroid (17-beta) dehydrogenase 8 (HKE6) genes,
              complete cds; and ring finger protein 1 (RING1) gene,
              partial cds
          Length = 447010

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     tacagctactgcagatgtttcctg 43
              ||||| ||||||||||||||||||
Sbjct: 278165 tacagatactgcagatgtttcctg 278188
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>gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complete sequence
          Length = 145706

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    ccttccttctgcgcttcttt 236
              ||||||||||||||||||||
Sbjct: 134533 ccttccttctgcgcttcttt 134552
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>gb|AC051619.7|AC051619 Homo sapiens chromosome 15 clone CTD-2651B20 map 15q21.1, complete
              sequence
          Length = 213999

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     agatgtttcctgccacagcc 51
              ||||||||||||||||||||
Sbjct: 137446 agatgtttcctgccacagcc 137427
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>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   agccttccttctgcgcttct 234
             ||||||||||||||||||||
Sbjct: 45167 agccttccttctgcgcttct 45148
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>dbj|AK222709.1| Homo sapiens mRNA for solute carrier family 28 (sodium-coupled
           nucleoside transporter), member 2 variant, clone:
           COL02243
          Length = 2298

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 996 agatgtttcctgccacagcc 977
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>gb|BC093737.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside
           transporter), member 2, mRNA (cDNA clone MGC:120772
           IMAGE:7939582), complete cds
          Length = 2095

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 959 agatgtttcctgccacagcc 940
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>dbj|AP006435.1| Sus scrofa  CC chemokine receptor genes (CCR3, CCR2, CCR5, CCRL2, LTF),
             complete and partial cds, clone: 0479G08
          Length = 144233

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   ttccatccttgcccttgctc 446
             ||||||||||||||||||||
Sbjct: 80463 ttccatccttgcccttgctc 80444
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>dbj|AP006185.1| Sus scrofa CC chemokine receptor genes (CCR2, CCR5, CCRL2, LTF, TMEM7,
             LRRC2), complete cds, clone: 0475A03
          Length = 165558

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   ttccatccttgcccttgctc 446
             ||||||||||||||||||||
Sbjct: 11858 ttccatccttgcccttgctc 11839
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>gb|AC091619.3| Papio anubis clone RP41-139B7, complete sequence
          Length = 181302

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ctgcagatgtttcctgccac 47
             ||||||||||||||||||||
Sbjct: 67320 ctgcagatgtttcctgccac 67301
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>dbj|AP006187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0264G11
          Length = 55919

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 526   tttccttgacttccttcttaatct 549
             ||||||||| ||||||||||||||
Sbjct: 51595 tttccttgatttccttcttaatct 51572
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>gb|AC123634.10| Mus musculus chromosome 3, clone RP24-434E24, complete sequence
          Length = 176948

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   agatgcctcctgctccattt 279
             ||||||||||||||||||||
Sbjct: 12165 agatgcctcctgctccattt 12184
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>gb|BC112047.1| Homo sapiens solute carrier family 28 (sodium-coupled nucleoside
           transporter), member 2, mRNA (cDNA clone MGC:138252
           IMAGE:8327515), complete cds
          Length = 2107

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 971 agatgtttcctgccacagcc 952
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>gb|AC124474.4| Mus musculus BAC clone RP24-88C10 from 1, complete sequence
          Length = 225413

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    tgcttccatccttgcccttg 443
              ||||||||||||||||||||
Sbjct: 137460 tgcttccatccttgcccttg 137441
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>gb|U84392.1|HSU84392 Human Na+-dependent purine specific transporter mRNA, complete cds
          Length = 2459

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 990 agatgtttcctgccacagcc 971
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 229     gcttctttccagttgaagac 248
               ||||||||||||||||||||
Sbjct: 1616645 gcttctttccagttgaagac 1616626
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>gb|AF036109.1|AF036109 Homo sapiens Na+/nucleoside cotransporter (hCNT2) mRNA, complete
           cds
          Length = 1995

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 32  agatgtttcctgccacagcc 51
           ||||||||||||||||||||
Sbjct: 945 agatgtttcctgccacagcc 926
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>dbj|AP008220.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             fosmid clone:OSJNOa246I10
          Length = 27635

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 526   tttccttgacttccttcttaatct 549
             ||||||||| ||||||||||||||
Sbjct: 18318 tttccttgatttccttcttaatct 18295
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>gb|AC165416.12| Mus musculus chromosome 3, clone RP23-86I19, complete sequence
          Length = 130155

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   agatgcctcctgctccattt 279
             ||||||||||||||||||||
Sbjct: 76469 agatgcctcctgctccattt 76488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,600,178
Number of Sequences: 3902068
Number of extensions: 4600178
Number of successful extensions: 83452
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83293
Number of HSP's gapped (non-prelim): 159
length of query: 581
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 558
effective length of database: 17,143,297,704
effective search space: 9565960118832
effective search space used: 9565960118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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