ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 420 e-114
2gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 404 e-109
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 143 8e-31
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 143 8e-31
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 143 8e-31
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 143 8e-31
7gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 143 8e-31
8dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
9dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
10dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
11dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
12dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
13dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 143 8e-31
14gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 129 1e-26
15gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 101 3e-18
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
17dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
18dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
19dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 7e-16
20gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 44 0.55
21gb|AC005251.1| Homo sapiens BAC clone CTA-324D18 from 7, complet... 42 2.2
22emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in ... 42 2.2
23gb|AC108719.3| Homo sapiens 3 BAC RP11-247J22 (Roswell Park Canc... 42 2.2
24emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in... 42 2.2
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.6
26ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein... 40 8.6
27gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 8.6
28emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.6
29gb|AC025577.15| Homo sapiens 12 BAC RP11-13C3 (Roswell Park Canc... 40 8.6
30gb|CP000249.1| Frankia sp. CcI3, complete genome 40 8.6
31gb|AF131950.1| Human papillomavirus candHPV85, complete genome 40 8.6
32gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, com... 40 8.6
33gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of... 40 8.6
34dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.6
35dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.6
36gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, com... 40 8.6

>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  420 bits (212), Expect = e-114
 Identities = 240/248 (96%), Gaps = 1/248 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 643 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcctgagcat 584

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 524

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||||||||||||||||||| |||  |||||||||||||||| || |||||||||||||||
Sbjct: 523 cacatctgcaatcttcgtctttg-gcccatgtgaagccctcacgtgatcgctcttgacga 465

                                                                       
Query: 565 cgaccccgacacatcggcgggcgctgtcgacaaccgggaggcctgacacgagctggaagt 624
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 464 cgaccccgacacatcggcgggcactgtcgacaaccgggaggcctgacacgagctggaagt 405

                   
Query: 625 gtccttca 632
           | ||||||
Sbjct: 404 ggccttca 397



 Score =  383 bits (193), Expect = e-103
 Identities = 241/253 (95%), Gaps = 3/253 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagtacagtacagaacagaatcttcctggcgtgcttctttacaaggaaaagctctccta 60
           ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 891 acagtacagtacagagcagaagcttcctggcgtgcttctttacaaggaaaagctctccta 832

                                                                       
Query: 61  aatgctcccaggcatattttt-gcgatacaggctacaaacacttttacat-ctataggat 118
           ||||||||||||| ||||||| ||||||||| || ||||||||||||||  |||||||||
Sbjct: 831 aatgctcccaggcttattttttgcgatacagactgcaaacacttttacagactataggat 772

                                                                       
Query: 119 ctgcctgctactcaaaagtaccgcggacacacatatttacagatccacaagtaccgggca 178
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctgcctgctactcaaa-gtaccgcggacacacatatttacagatccacaagtaccgggca 713

                                                                       
Query: 179 tgggctcctgcgcctctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcg 238
           ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tggactcctgcatctctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcg 653

                        
Query: 239 ggtaactatacct 251
           |||||||||||||
Sbjct: 652 ggtaactatacct 640



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>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  404 bits (204), Expect = e-109
 Identities = 238/248 (95%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 324

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 384

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||||||||||||||||||| |||  |||||||||||||||||||| ||||||||| ||||
Sbjct: 385 cacatctgcaatcttcgtctttg-gcccatgtgaagccctcgcgcaatcgctcttcacga 443

                                                                       
Query: 565 cgaccccgacacatcggcgggcgctgtcgacaaccgggaggcctgacacgagctggaagt 624
           |||||||||| |||| ||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 cgaccccgacgcatctgcgagcgctgtcgacaaccgggaggcctgacacgagctgaaagt 503

                   
Query: 625 gtccttca 632
           | ||||||
Sbjct: 504 ggccttca 511



 Score =  333 bits (168), Expect = 4e-88
 Identities = 222/236 (94%), Gaps = 3/236 (1%)
 Strand = Plus / Plus

                                                                       
Query: 17  cagaatcttcctggcgtgcttctttacaaggaaaagctctcctaaatgctcccaggcata 76
           ||||| ||||| |||||||||||||||||||||||||||||||||| | |||||||| ||
Sbjct: 35  cagaagcttccgggcgtgcttctttacaaggaaaagctctcctaaaagttcccaggctta 94

                                                                       
Query: 77  tttttgcgatacaggctacaaacacttttacat-ctataggatctgcctgctactcaaaa 135
           ||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||||||
Sbjct: 95  tttttgcgatacaggctacaa-cacttttacagactatag-atctgcctgctactcaaaa 152

                                                                       
Query: 136 gtaccgcggacacacatatttacagatccacaagtaccgggcatgggctcctgcgcctct 195
           | |||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||
Sbjct: 153 gcaccgcggacacacatatttacagatccacaagtaccgggcatggactcctgcatctct 212

                                                                   
Query: 196 aaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 213 aaaacttcagcatggcctccaacgcgcgaagaacgtcgtcgcgggtaactatacct 268



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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 635 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 576

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 575 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 516

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 515 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 457



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 632



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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 635 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 576

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 575 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 516

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 515 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 457



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 632



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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 641 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 582

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 581 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 522

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 521 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 463



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 696 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 638



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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 627 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 568

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 567 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 508

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 507 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 449



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 624



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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                        
Query: 385  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 1059 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 1000

                                                                        
Query: 445  cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
            ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 999  cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 940

                                                                        
Query: 505  cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
            ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 939  cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 881



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 193  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 1114 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 1056



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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 627 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 568

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 567 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 508

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 507 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 449



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 624



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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 627 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 568

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 567 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 508

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 507 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 449



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 624



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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 635 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 576

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 575 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 516

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 515 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 457



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 632



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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 635 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 576

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 575 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 516

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 515 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 457



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 632



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>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 628 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 569

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 568 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 509

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 508 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 450



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 683 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 625



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>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  143 bits (72), Expect = 8e-31
 Identities = 154/180 (85%), Gaps = 1/180 (0%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 444
           |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 640 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 581

                                                                       
Query: 445 cagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcat 504
           ||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||
Sbjct: 580 cagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcat 521

                                                                       
Query: 505 cacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacga 564
           ||| ||||||||||||||| |||| |||||| |||||||| || || || ||||||||||
Sbjct: 520 cacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacga 462



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 695 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 637



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>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  129 bits (65), Expect = 1e-26
 Identities = 154/181 (85%), Gaps = 2/181 (1%)
 Strand = Plus / Minus

                                                                       
Query: 385 acctattacttgattgtcctggtttactatcggtaatctgtggatc-ttcttcttgagca 443
           |||||| |||||  ||||||| ||||| || ||||||||||||||| |||||||| ||||
Sbjct: 894 acctatcacttgtctgtcctgatttacaattggtaatctgtggatccttcttctttagca 835

                                                                       
Query: 444 tcagagctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtca 503
           |||||||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| ||||
Sbjct: 834 tcagagctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtca 775

                                                                       
Query: 504 tcacatctgcaatcttcgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacg 563
           |||| ||||||||||||||| |||| |||||| |||||||| || || || |||||||||
Sbjct: 774 tcacttctgcaatcttcgtctttga-cccatgagaagccctggcccggtcactcttgacg 716

            
Query: 564 a 564
           |
Sbjct: 715 a 715



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                      
Query: 193 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 949 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 891



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>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  101 bits (51), Expect = 3e-18
 Identities = 175/215 (81%), Gaps = 1/215 (0%)
 Strand = Plus / Minus

                                                                       
Query: 400 gtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatc 459
           |||||||||||| |  ||||||||||||||||||||||||||||| ||| | || |||||
Sbjct: 525 gtcctggtttacaactggtaatctgtggatcttcttcttgagcatgagaacagcagcatc 466

                                                                       
Query: 460 ggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatctt 519
             |||| ||||| ||  | ||||| ||||| ||||||||||||||||| || |  |||||
Sbjct: 465 catcacggttttgtcagacgatagtgtgatagctggagatgtcatcacttccgatatctt 406

                                                                       
Query: 520 cgtccttgaccccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatc 579
           ||| ||||  |||||| || || || || || ||| |||||||||  |||||||| ||||
Sbjct: 405 cgt-cttggacccatgagaggctcttgcccggtcgttcttgacgatcaccccgacgcatc 347

                                              
Query: 580 ggcgggcgctgtcgacaaccgggaggcctgacacg 614
            | || |||||||||| ||||| || || ||||||
Sbjct: 346 tgaggccgctgtcgacgaccggaagccccgacacg 312



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 194 ctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 251
           ||||| ||||| |||| | |||||| |||||||||| ||| |||||||||||||||||
Sbjct: 594 ctaaatcttcaacatgccttccaacacgcgaagaacatcagcgcgggtaactatacct 537



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                            
Query: 381      actcacctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttga 440
                |||||||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |
Sbjct: 35111794 actcacctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttcttta 35111735

                                   
Query: 441      gcatcagagctgcggcatc 459
                ||||||||||||| |||||
Sbjct: 35111734 gcatcagagctgccgcatc 35111716



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                            
Query: 193      tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctg 252
                |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 35111977 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacctg 35111918

                   
Query: 253      tta 255
                |||
Sbjct: 35111917 tta 35111915



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 464      actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 523
                |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 35111621 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 35111562

                      
Query: 524      cttgac 529
                 |||||
Sbjct: 35111561 tttgac 35111556



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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                        
Query: 381  actcacctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttga 440
            |||||||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |
Sbjct: 7150 actcacctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttcttta 7091

                               
Query: 441  gcatcagagctgcggcatc 459
            ||||||||||||| |||||
Sbjct: 7090 gcatcagagctgccgcatc 7072



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                        
Query: 193  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctg 252
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 7333 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacctg 7274

               
Query: 253  tta 255
            |||
Sbjct: 7273 tta 7271



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 464  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 523
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 6977 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 6918

                  
Query: 524  cttgac 529
             |||||
Sbjct: 6917 tttgac 6912



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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Minus

                                                                         
Query: 381   actcacctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttga 440
             |||||||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |
Sbjct: 84957 actcacctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttcttta 84898

                                
Query: 441   gcatcagagctgcggcatc 459
             ||||||||||||| |||||
Sbjct: 84897 gcatcagagctgccgcatc 84879



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Minus

                                                                         
Query: 193   tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctg 252
             |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 85140 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacctg 85081

                
Query: 253   tta 255
             |||
Sbjct: 85080 tta 85078



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 464   actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 523
             |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 84784 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 84725

                   
Query: 524   cttgac 529
              |||||
Sbjct: 84724 tttgac 84719



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>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                        
Query: 381  actcacctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttga 440
            |||||||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |
Sbjct: 2396 actcacctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttcttta 2455

                               
Query: 441  gcatcagagctgcggcatc 459
            ||||||||||||| |||||
Sbjct: 2456 gcatcagagctgccgcatc 2474



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                        
Query: 193  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctg 252
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 2213 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacctg 2272

               
Query: 253  tta 255
            |||
Sbjct: 2273 tta 2275



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 464  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 523
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 2569 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 2628

                  
Query: 524  cttgac 529
             |||||
Sbjct: 2629 tttgac 2634



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>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 96     aaacacttttacatctatagga 117
              ||||||||||||||||||||||
Sbjct: 101167 aaacacttttacatctatagga 101188



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>gb|AC005251.1| Homo sapiens BAC clone CTA-324D18 from 7, complete sequence
          Length = 92636

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 319   gatgatacagatctagtagtatata 343
             |||||||||| ||||||||||||||
Sbjct: 82511 gatgatacagttctagtagtatata 82487



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>emb|CR391913.7| Zebrafish DNA sequence from clone DKEY-118P6 in linkage group 5, complete
              sequence
          Length = 190731

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 348    tcctttgctgctggttttgtc 368
              |||||||||||||||||||||
Sbjct: 106864 tcctttgctgctggttttgtc 106884



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>gb|AC108719.3| Homo sapiens 3 BAC RP11-247J22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 43088

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 344   aaagtcctttgctgctggttt 364
             |||||||||||||||||||||
Sbjct: 22540 aaagtcctttgctgctggttt 22560



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>emb|AL928727.8| Zebrafish DNA sequence from clone CH211-130P8 in linkage group 5,
             complete sequence
          Length = 172861

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   tcctttgctgctggttttgtc 368
             |||||||||||||||||||||
Sbjct: 79138 tcctttgctgctggttttgtc 79118



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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 576     catcggcgggcgctgtcgac 595
               ||||||||||||||||||||
Sbjct: 1917126 catcggcgggcgctgtcgac 1917145



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>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 421  tctgtggatcttcttcttga 440
            ||||||||||||||||||||
Sbjct: 1378 tctgtggatcttcttcttga 1397



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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    tcttcttgagcatcagagct 451
              ||||||||||||||||||||
Sbjct: 171536 tcttcttgagcatcagagct 171517



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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete
             sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 576   catcggcgggcgctgtcgac 595
             ||||||||||||||||||||
Sbjct: 75837 catcggcgggcgctgtcgac 75856



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>gb|AC025577.15| Homo sapiens 12 BAC RP11-13C3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154090

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 247   tacctgttagcattgtttagaata 270
             |||||||||||||| |||||||||
Sbjct: 14923 tacctgttagcattctttagaata 14946



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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 576     catcggcgggcgctgtcgac 595
               ||||||||||||||||||||
Sbjct: 2567233 catcggcgggcgctgtcgac 2567252



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>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   tttgcgatacaggctacaaa 98
            ||||||||||||||||||||
Sbjct: 3734 tttgcgatacaggctacaaa 3753



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>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence
          Length = 143045

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    gctctcctaaatgctcccag 71
             ||||||||||||||||||||
Sbjct: 76812 gctctcctaaatgctcccag 76793



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>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 209  ggcctccaacgcgcgaagaacgtcatcg 236
            ||||| ||| ||||||||||||||||||
Sbjct: 2227 ggcctgcaaggcgcgaagaacgtcatcg 2200



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>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    acatatttacagatccacaa 168
              ||||||||||||||||||||
Sbjct: 119986 acatatttacagatccacaa 119967



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>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   acatatttacagatccacaa 168
             ||||||||||||||||||||
Sbjct: 30122 acatatttacagatccacaa 30103



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>gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, complete sequence
          Length = 188552

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 253   ttagcattgtttagaataat 272
             ||||||||||||||||||||
Sbjct: 65330 ttagcattgtttagaataat 65311


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,049,258
Number of Sequences: 3902068
Number of extensions: 5049258
Number of successful extensions: 85380
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85224
Number of HSP's gapped (non-prelim): 149
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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