ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd21d24 |
|---|---|
| Clone Library Name | barley_pub |
>RUBR_SYNY3 (P73068) Rubredoxin (Rd)| Length = 115 Score = 102 bits (254), Expect = 7e-22 Identities = 50/106 (47%), Positives = 68/106 (64%), Gaps = 2/106 (1%) Frame = -1 Query: 514 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 335 E+ A L + HECR+CGY+Y ++GD V PG PF +P +W+CP CGA +++F S Sbjct: 7 EKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYFIST 66 Query: 334 SVEIA--GFAQNQQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGY 203 A GFA+N +G G N ++ G+K LLI+GSL V F FFLS Y Sbjct: 67 GETDAPSGFAENLNYGFGFNRMSGGKKNLLIFGSLFVIFLFFLSLY 112
>RUBR_ANAVT (Q9XBL8) Rubredoxin (Rd)| Length = 111 Score = 100 bits (249), Expect = 2e-21 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 305 ECRSCGY+Y+ KGD + + P PFA++P +WRCP C A ++ F + + +GF +N Sbjct: 15 ECRSCGYVYEPEKGDSKHDIAPETPFAELPINWRCPVCTAKKAAFSNIGPAGTASGFREN 74 Query: 304 QQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 194 +GLG N LT QK +LI+G+L +GF FF+S Y LQ Sbjct: 75 LGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111
>RUBR_ANASP (Q9WWN1) Rubredoxin (Rd)| Length = 111 Score = 99.8 bits (247), Expect = 4e-21 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 2/97 (2%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS--KSVEIAGFAQN 305 ECRSCGY+Y+ KGD + + P PFA++P +WRCP C A ++ F + + +GF +N Sbjct: 15 ECRSCGYVYEPEKGDNKHDIAPETPFAELPINWRCPVCTAKKAAFTNIGPAGTASGFREN 74 Query: 304 QQFGLGGNSLTSGQKTLLIYGSLLVGFAFFLSGYFLQ 194 +GLG N LT QK +LI+G+L +GF FF+S Y LQ Sbjct: 75 LGYGLGVNKLTPAQKNILIFGALALGFLFFISLYGLQ 111
>RUBR_METTH (O26258) Probable rubredoxin (RD)| Length = 63 Score = 67.4 bits (163), Expect = 2e-11 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 ++CR CGY+YD KG+P PPG PF +P+ WRCP+CGA + F Sbjct: 14 YKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMF 59
>HRB_MOOTA (Q9FDN6) High molecular weight rubredoxin (Nitric oxide reductase| NADH:FprA oxidoreductase) Length = 229 Score = 65.5 bits (158), Expect = 9e-11 Identities = 24/58 (41%), Positives = 36/58 (62%) Frame = -1 Query: 514 EEQFAVLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 E+ L + ++C C Y+YD +GDP + + PG PFA +P+DW CP CGA + F+ Sbjct: 170 EKDKTALASPKYQCTICNYVYDPVQGDPEHGIAPGTPFADLPEDWTCPICGAGKDAFE 227
>RUBR_DESGI (P00270) Rubredoxin (Rd)| Length = 52 Score = 64.3 bits (155), Expect = 2e-10 Identities = 24/50 (48%), Positives = 32/50 (64%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSK 335 ++ C CGY YD AKGDP + PG F +PDDW CP CGA++ F+ + Sbjct: 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ 52
>RUBL_RHILV (P28151) Probable rubredoxin hupI| Length = 70 Score = 63.9 bits (154), Expect = 3e-10 Identities = 24/45 (53%), Positives = 32/45 (71%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 EC C ++YD A+GDP + +PPG PF+ + +DWRCP C A QS F Sbjct: 19 ECGICWHVYDPAEGDPVWQIPPGTPFSNLTEDWRCPNCDALQSKF 63
>RUBR_PYRFU (P24297) Rubredoxin (Rd)| Length = 53 Score = 62.4 bits (150), Expect = 8e-10 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 C+ CGY+YD+ GDP + PG F ++PDDW CP CGA +S F+ Sbjct: 5 CKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFE 49
>RUBR_PYRAB (Q9V099) Rubredoxin (Rd)| Length = 53 Score = 62.4 bits (150), Expect = 8e-10 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 C+ CGY+YD+ +GDP + PG F +PDDW CP CGA +S F+ Sbjct: 6 CKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAPKSEFE 50
>RUBR_CLOTS (P19500) Rubredoxin (Rd)| Length = 52 Score = 61.2 bits (147), Expect = 2e-09 Identities = 22/46 (47%), Positives = 29/46 (63%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 +C CGY+YD GDP+ +PPG F +PDDW CP CG + F+ Sbjct: 5 QCTVCGYIYDPEVGDPTQNIPPGTKFEDLPDDWVCPDCGVGKDQFE 50
>RUBR_CHLLT (P09947) Rubredoxin (Rd)| Length = 53 Score = 60.5 bits (145), Expect = 3e-09 Identities = 22/48 (45%), Positives = 30/48 (62%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 332 C CGY+YD A G+P P+ PG F +P+DW CP CG + F+ +S Sbjct: 6 CSVCGYVYDPADGEPDDPIDPGTGFEDLPEDWVCPVCGVDKDLFEPES 53
>RUBR3_CHLTE (P58025) Rubredoxin 3 (Rd 3)| Length = 53 Score = 60.1 bits (144), Expect = 4e-09 Identities = 24/48 (50%), Positives = 29/48 (60%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 332 C CGY YD A GDP + PG F +P+DW CP CG +SFF+ S Sbjct: 6 CVPCGYEYDPADGDPENGIEPGTAFEDLPEDWVCPVCGVDKSFFEPVS 53
>RUBR_CLOAB (Q9AL94) Rubredoxin (Rd)| Length = 54 Score = 59.7 bits (143), Expect = 5e-09 Identities = 23/45 (51%), Positives = 28/45 (62%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 C CGY+YD A+GDP V PG F +PDDW CP CG + F+ Sbjct: 6 CVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFE 50
>RUBR_HELMO (P56263) Rubredoxin (Rd)| Length = 52 Score = 59.3 bits (142), Expect = 6e-09 Identities = 22/45 (48%), Positives = 29/45 (64%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 C CGY+YD AKGDP + + PG F +P DW CP CG ++ F+ Sbjct: 6 CLVCGYVYDPAKGDPDHGIAPGTAFEDLPADWVCPLCGVSKDEFE 50
>RUBR2_CLOPE (P14072) Rubredoxin 2 (Rd 2)| Length = 53 Score = 59.3 bits (142), Expect = 6e-09 Identities = 24/44 (54%), Positives = 27/44 (61%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 C CGY+YD A GDP V PG F +PDDW CP CG +S F Sbjct: 6 CDVCGYIYDPAVGDPDNGVEPGTEFKDIPDDWVCPLCGVDKSQF 49
>RUBR_DESVM (P15412) Rubredoxin (Rd)| Length = 52 Score = 58.9 bits (141), Expect = 8e-09 Identities = 25/45 (55%), Positives = 28/45 (62%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 C CGY YD A+GDP V PG F VP DW CP CGA +S F+ Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFE 50
>RUBR_BUTME (P14071) Rubredoxin (Rd)| Length = 53 Score = 58.5 bits (140), Expect = 1e-08 Identities = 23/48 (47%), Positives = 30/48 (62%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 332 C CGY+YD A GDP V PG FA +P+DW CP CG ++ F ++ Sbjct: 6 CDICGYVYDPAVGDPDNGVAPGTAFADLPEDWVCPECGVSKDEFSPEA 53
>RUBR_DESVH (P00269) Rubredoxin (Rd)| Length = 52 Score = 58.2 bits (139), Expect = 1e-08 Identities = 24/46 (52%), Positives = 29/46 (63%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS 338 C CGY YD A+GDP V PG F +P DW CP CGA +S F++ Sbjct: 6 CTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFEA 51
>RUBR1_METJA (Q58145) Probable rubredoxin 1 (RD 1)| Length = 80 Score = 58.2 bits (139), Expect = 1e-08 Identities = 20/39 (51%), Positives = 28/39 (71%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 365 ++C+ CG++YD KGDPS +PP PF ++PD W CP C Sbjct: 22 YKCKVCGWVYDPLKGDPSQNIPPKTPFEELPDTWICPVC 60
>RUBR_AZOVI (P30778) Rubredoxin (Rd)| Length = 72 Score = 57.8 bits (138), Expect = 2e-08 Identities = 23/47 (48%), Positives = 29/47 (61%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 V EC+ C YD A+GDP + +PPG PFA +P WRCP C + F Sbjct: 21 VLECKICWQRYDPAEGDPVWQIPPGTPFAALPAHWRCPRCDGDREQF 67
>RUBR1_CHLTE (P58992) Rubredoxin 1 (Rd 1)| Length = 69 Score = 57.8 bits (138), Expect = 2e-08 Identities = 21/44 (47%), Positives = 29/44 (65%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 C CGY+YD A+G+ + PG+PF K+PDDW CP C ++ F Sbjct: 19 CAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQF 62
>RUBR4_RHOSQ (P0A4F1) Rubredoxin 4| Length = 60 Score = 57.0 bits (136), Expect = 3e-08 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +++C CG+ YD+A G P + PG + +P+DW CP CGAA+S F VE Sbjct: 6 LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
>RUBR4_RHOER (P0A4F0) Rubredoxin 4| Length = 60 Score = 57.0 bits (136), Expect = 3e-08 Identities = 23/53 (43%), Positives = 33/53 (62%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +++C CG+ YD+A G P + PG + +P+DW CP CGAA+S F VE Sbjct: 6 LYQCAQCGFEYDEAVGWPEDGIEPGTRWDDIPEDWSCPDCGAAKSDFFMVEVE 58
>RUBR_CLOPA (P00268) Rubredoxin (Rd)| Length = 54 Score = 56.2 bits (134), Expect = 5e-08 Identities = 21/47 (44%), Positives = 27/47 (57%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 + C CGY+Y+ GDP V PG F +PDDW CP CG + F+ Sbjct: 4 YTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFE 50
>RUBR2_DESDE (Q93PP8) Rubredoxin 2 (Rd-2)| Length = 61 Score = 56.2 bits (134), Expect = 5e-08 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = -1 Query: 469 SCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +CGY+YD +GD VP G F +P+DWRCP CGA + F S E Sbjct: 13 NCGYVYDPDRGDKRRKVPAGTKFEDLPEDWRCPVCGAGKKSFRRLSDE 60
>RUBR_CLOST (P23474) Rubredoxin (Rd)| Length = 53 Score = 55.8 bits (133), Expect = 7e-08 Identities = 20/48 (41%), Positives = 28/48 (58%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKS 332 C CGY+YD GDP + PG F +P+DW CP CG + F+ ++ Sbjct: 6 CTVCGYVYDPEVGDPDNNINPGTSFQDIPEDWVCPLCGVGKDQFEEEA 53
>RUBR2_CHLTE (P58993) Rubredoxin 2 (Rd 2)| Length = 52 Score = 55.8 bits (133), Expect = 7e-08 Identities = 20/45 (44%), Positives = 26/45 (57%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 +C CGY+Y+ GDP +P G F +PD W CP CGA + F Sbjct: 5 KCNICGYIYNPETGDPEGDIPAGTSFESLPDSWMCPVCGAGKEEF 49
>RUBR_MEGEL (P00271) Rubredoxin (Rd)| Length = 52 Score = 55.5 bits (132), Expect = 9e-08 Identities = 24/46 (52%), Positives = 30/46 (65%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 +EC CGY+YD+A+GD V G FA +P DW CPTCGA + F Sbjct: 4 YECSICGYIYDEAEGDDGN-VAAGTKFADLPADWVCPTCGADKDAF 48
>NORV_SHIFL (P59405) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 55.1 bits (131), Expect = 1e-07 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477
>NORV_ECOL6 (P59404) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 55.1 bits (131), Expect = 1e-07 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 477
>NORV_ECO57 (Q8X852) Anaerobic nitric oxide reductase flavorubredoxin homolog| (FlRd homolog) (FlavoRb homolog) Length = 411 Score = 55.1 bits (131), Expect = 1e-07 Identities = 21/51 (41%), Positives = 32/51 (62%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD AKG+P V PG P+++VPD++ CP C + FD + E Sbjct: 359 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFDELASE 409
>RUBR2_METJA (Q58150) Probable rubredoxin 2 (RD 2)| Length = 55 Score = 55.1 bits (131), Expect = 1e-07 Identities = 20/41 (48%), Positives = 29/41 (70%) Frame = -1 Query: 466 CGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 CG++YD+ KG+PS +PPG F +PD +RCP CG ++ F Sbjct: 11 CGWVYDEDKGEPSQNIPPGTKFEDLPDTFRCPQCGLGKNAF 51
>RUBR_ACIAD (P42453) Rubredoxin (Rd)| Length = 54 Score = 54.7 bits (130), Expect = 2e-07 Identities = 19/47 (40%), Positives = 31/47 (65%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 ++C CG++YD+A+G P + PG + +PDDW CP CG ++ F+ Sbjct: 4 YQCIVCGWIYDEAEGWPQDGIAPGTKWEDIPDDWTCPDCGVSKVDFE 50
>RUBR2_PSEOL (P00272) Rubredoxin 2 (Two-iron rubredoxin)| Length = 172 Score = 53.9 bits (128), Expect = 3e-07 Identities = 20/41 (48%), Positives = 27/41 (65%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 353 C +CG++YD+A GD + PG F +PDDW CP CGA + Sbjct: 123 CITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGATK 163 Score = 45.4 bits (106), Expect = 1e-04 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 365 ++C C Y+YD++ G+ PG P+ +P+DW CP C Sbjct: 3 YKCPDCNYVYDESAGNVHEGFSPGTPWHLIPEDWCCPDC 41
>NORV_ECOLI (Q46877) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 53.5 bits (127), Expect = 3e-07 Identities = 20/51 (39%), Positives = 32/51 (62%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD AKG+P V PG P+++VPD++ CP C + F+ + E Sbjct: 427 QCSVCQWIYDPAKGEPMQDVAPGTPWSEVPDNFLCPECSLGKDVFEELASE 477
>RUBR2_RHOER (Q9AE63) Rubredoxin 2| Length = 63 Score = 53.5 bits (127), Expect = 3e-07 Identities = 21/50 (42%), Positives = 31/50 (62%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 C CG+ YD+A G P + PG + ++P+DW CP CGAA+ F+ V+ Sbjct: 13 CLQCGFEYDEAIGWPDDGIEPGTRWDEIPEDWSCPDCGAAKVDFEMVEVD 62
>RUBR3_RHOSQ (P0A4E9) Rubredoxin 3| Length = 61 Score = 53.1 bits (126), Expect = 5e-07 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 353 + C C Y+YD++KG P P G P+ VPDDW CP CG + Sbjct: 4 YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46
>RUBR3_RHOER (P0A4E8) Rubredoxin 3| Length = 61 Score = 53.1 bits (126), Expect = 5e-07 Identities = 20/43 (46%), Positives = 26/43 (60%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQ 353 + C C Y+YD++KG P P G P+ VPDDW CP CG + Sbjct: 4 YRCPVCEYVYDESKGAPREGFPAGTPWDAVPDDWCCPDCGVRE 46
>RUBL_BRAJA (P48344) Probable rubredoxin hupI| Length = 69 Score = 52.8 bits (125), Expect = 6e-07 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 EC C +YD A GD + PG PFA +P++W CP C A +S F Sbjct: 20 ECGICWTVYDPADGDDVAQIAPGTPFAALPEEWHCPNCDAPKSKF 64
>HUPJ_RHOCA (Q03009) Probable rubredoxin hupJ| Length = 278 Score = 52.4 bits (124), Expect = 8e-07 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = -1 Query: 499 VLNTGVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 + + + EC+ C YD A GD V PG PF +P+DW CP C A ++ F Sbjct: 20 ISDLAIMECKICWTPYDPASGDEFRQVLPGTPFTALPEDWHCPNCDAPKAQF 71
>RUBR1_CLOPE (Q8XMB2) Rubredoxin 1 (Rd 1)| Length = 53 Score = 51.2 bits (121), Expect = 2e-06 Identities = 20/44 (45%), Positives = 24/44 (54%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 C CGY+YD GDP V PG F +PD W CP C ++ F Sbjct: 6 CDVCGYIYDPVVGDPDNGVAPGTKFKDIPDTWVCPLCKLDKTHF 49
>NORV_SALTI (Q8Z4C5) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 51.2 bits (121), Expect = 2e-06 Identities = 20/51 (39%), Positives = 30/51 (58%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD A G+P V PG P++ VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWSDVPDNFLCPECSLGKDVFDVLATE 477
>NORV_SALTY (Q8ZMJ7) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 479 Score = 50.1 bits (118), Expect = 4e-06 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVE 326 +C C ++YD A G+P V PG P+ VPD++ CP C + FD + E Sbjct: 427 QCSVCQWIYDPALGEPLQDVAPGTPWNDVPDNFLCPECSLGKDVFDVLATE 477
>RUBR_RALEU (P31912) Rubredoxin (Rd)| Length = 78 Score = 49.7 bits (117), Expect = 5e-06 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC-GAAQSF 347 EC+ C + YD GDP + + PG F+ +P WRCP C G A+ F Sbjct: 27 ECKICWWEYDPEVGDPVWQIAPGTSFSALPAHWRCPNCDGEAEQF 71
>RUBR_AZOCH (P48343) Rubredoxin in uptake hydrogenase operon| Length = 72 Score = 47.8 bits (112), Expect = 2e-05 Identities = 20/47 (42%), Positives = 26/47 (55%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 V EC+ C + YD A GD + + G PFA +P WRCP C + F Sbjct: 21 VLECKICWHRYDPAVGDEVWQILAGTPFAALPAHWRCPQCDGDREQF 67
>RUBR_TREPA (O83956) Rubredoxin (Rd)| Length = 52 Score = 47.0 bits (110), Expect = 3e-05 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -1 Query: 487 GVHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 G + C CG+ Y+ GD +P G F +PD W CP CG ++ F Sbjct: 2 GTYMCDLCGWGYNPEVGDADGGIPAGTAFENLPDHWECPLCGVDKTSF 49
>RUBR1_DESDE (P04170) Rubredoxin 1 (Rd-1)| Length = 45 Score = 45.4 bits (106), Expect = 1e-04 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 C CGY YD A+ D +PF ++PDDW CP CG ++ F Sbjct: 6 CNVCGYEYDPAEHD-------NVPFDQLPDDWCCPVCGVSKDQF 42
>RUBR1_PSEOL (P12692) Rubredoxin 1| Length = 132 Score = 44.7 bits (104), Expect = 2e-04 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -1 Query: 481 HECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTC 365 ++C C Y+YD+ KG+P P + +P DW CP C Sbjct: 4 YQCPDCQYIYDENKGEPHEGFHPNTSWNDIPKDWACPDC 42
>RUBR_PEPAS (P00267) Rubredoxin (Rd)| Length = 53 Score = 44.3 bits (103), Expect = 2e-04 Identities = 20/46 (43%), Positives = 25/46 (54%) Frame = -1 Query: 478 ECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFD 341 EC CGY+YD A P P G F V ++W CP CGA + F+ Sbjct: 5 ECTLCGYIYDPALVGPDTPDQDGA-FEDVSENWVCPLCGAGKEDFE 49
>NORV_VIBVU (Q8D4F8) Anaerobic nitric oxide reductase flavorubredoxin (FlRd)| (FlavoRb) Length = 494 Score = 43.1 bits (100), Expect = 5e-04 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1 Query: 475 CRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFF 344 C C ++YD AKG+P+ + G +A VPD + CP C + F Sbjct: 446 CTVCNWVYDPAKGEPNQGIEVGTTWADVPDYFLCPECHLGKDVF 489
>MARH4_HUMAN (Q9P2E8) Membrane-associated RING finger protein 4| (Membrane-associated RING-CH protein IV) (MARCH-IV) (RING finger protein 174) Length = 410 Score = 33.1 bits (74), Expect = 0.49 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -1 Query: 433 PSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDSKSVEIAGFAQNQQFGLGGNSLTSGQKTL 254 P P PP LP + V DDW P S S S + + + G+SL SG +T Sbjct: 102 PPVPPPPPLPPSSVEDDWGGPATEPPASLLSSASSDDFCKEKTEDRYSLGSSLDSGMRTP 161 Query: 253 L 251 L Sbjct: 162 L 162
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 33.1 bits (74), Expect = 0.49 Identities = 18/45 (40%), Positives = 20/45 (44%) Frame = -3 Query: 527 PPPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQG 393 PPP+RG H P + LP GRP PG PG V G Sbjct: 184 PPPMRGMSPMHPHQMGPGPGVGLPPHMNHGRPGGPGGPGGPVPMG 228
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 32.7 bits (73), Expect = 0.64 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 Query: 500 GAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 GA+ G + P P GRP PGAPG GPG Sbjct: 539 GAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPG 576 Score = 32.7 bits (73), Expect = 0.64 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 Query: 500 GAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 GA+ G + P P GRP PGAPG GPG Sbjct: 414 GAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPG 451 Score = 32.7 bits (73), Expect = 0.64 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 Query: 500 GAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 GA+ G + P P GRP PGAPG GPG Sbjct: 289 GAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPG 326 Score = 32.7 bits (73), Expect = 0.64 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = -3 Query: 500 GAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 GA+ G + P P GRP PGAPG GPG Sbjct: 164 GAQRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPG 201
>CLCN7_HUMAN (P51798) Chloride channel protein 7 (ClC-7)| Length = 805 Score = 32.3 bits (72), Expect = 0.83 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = -3 Query: 473 PVLRLPVRPGQGRPVLPGAPGAAVRQGP 390 P+LR RPG G P+L GA A RQ P Sbjct: 22 PLLRRTARPGGGTPLLNGAGPGAARQSP 49
>PHAR2_HUMAN (O75167) Phosphatase and actin regulator 2| Length = 634 Score = 32.0 bits (71), Expect = 1.1 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Frame = -3 Query: 527 PPPVRGAVRGAEHGGARVPVLRLPVR-PGQGRPVLPGAPGA 408 P P +GA GA H G VP ++ + PG+ PV P P + Sbjct: 173 PVPPKGATAGASHKGDEVPPIKKNTKAPGKQAPVPPPKPAS 213
>LTBP1_RAT (Q00918) Latent transforming growth factor beta-binding protein 1| precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta-1-BP-1) (Transforming growth factor beta-1-masking protein, large subunit) Length = 1712 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -3 Query: 524 PPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 PP R ++ GGA +P LR P+ P P PGAP + G Sbjct: 75 PPAERTRRTSQPGGAALPGLRSPLPP---EPARPGAPSRQLHSKAG 117
>NKX61_RAT (O35762) Homeobox protein Nkx-6.1| Length = 365 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 225 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 347 KP LP + +FWP V + PP + P ++LL K Sbjct: 193 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 233
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 225 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 347 KP LP + +FWP V + PP + P ++LL K Sbjct: 193 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 233
>CBPA_DICDI (P35085) Calcium-binding protein| Length = 467 Score = 31.2 bits (69), Expect = 1.9 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = -3 Query: 524 PPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAVPDVRRG 357 PP G + G P P +PGQ P PGAPG Q PG+ P + G Sbjct: 59 PPYPGT---QQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPG 111 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = -3 Query: 473 PVLRLPVRPGQGRPVLPGAPGAAVRQGPGR 384 P LP PG +P PGAPG Q PG+ Sbjct: 54 PGSNLPPYPGTQQPGAPGAPGQYPPQQPGQ 83
>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1| Length = 364 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 225 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 347 KP LP + +FWP V + PP + P ++LL K Sbjct: 192 KPLAELPGRAPIFWPGVMQSPPWRDARLACTPHQGSILLDK 232
>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1| Length = 367 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +3 Query: 225 KPTRRLP*MSSVFWPEVSELPPSPNCWFCANPAISTLLLSK 347 KP LP + +FWP V + PP + P ++LL K Sbjct: 192 KPLAELPGRTPIFWPGVMQSPPWRDARLACTPHQGSILLDK 232
>ULK1_HUMAN (O75385) Serine/threonine-protein kinase ULK1 (EC 2.7.11.1)| (Unc-51-like kinase 1) Length = 1050 Score = 30.4 bits (67), Expect = 3.2 Identities = 16/46 (34%), Positives = 18/46 (39%) Frame = +1 Query: 388 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXXAPPCSAPRTAPRTGG 525 P P P PG +G P P P SAP +PRT G Sbjct: 504 PSPQVGTIPERPGWSGTPSPQGAEMRGGRSPRPGSSAPEHSPRTSG 549
>NUCG_BOVIN (P38447) Endonuclease G, mitochondrial precursor (EC 3.1.30.-)| (Endo G) Length = 299 Score = 30.0 bits (66), Expect = 4.1 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = -3 Query: 464 RLPVRPGQGRPVLPGAPGAAVRQGPGRLA 378 RLPV P LP PGA GPG LA Sbjct: 39 RLPVLPVAAAAGLPAVPGAPAGGGPGELA 67
>LTB1L_MOUSE (Q8CG19) Latent transforming growth factor beta-binding protein,| isoform 1L precursor (LTBP-1) (Transforming growth factor beta-1-binding protein 1) (TGF-beta1-BP-1) Length = 1713 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 524 PPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPG 387 PP R ++ GGA +P LR P+ P P PG P + G Sbjct: 75 PPAERTRRTSQPGGAALPGLRSPLPP---EPARPGGPSRQLHSKAG 117
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 30.0 bits (66), Expect = 4.1 Identities = 27/62 (43%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Frame = -3 Query: 527 PPPVRGAVR-GAEHGGARVPVLRLPVRPG----QGRPVLPGAPGAAVRQGPGRLAVPDVR 363 P P GA R GA GA +P RPG GRP PGAP R G GR P R Sbjct: 195 PVPRPGAPRPGAPRPGASPG--NMPPRPGGVGGPGRPARPGAP----RPGGGRPGGPGGR 248 Query: 362 RG 357 G Sbjct: 249 DG 250
>FMT_THETH (P43523) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 305 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -3 Query: 491 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 375 H G RV LRL PG+G PG R GP +AV Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265
>FMT_THET2 (Q72H32) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 305 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/39 (43%), Positives = 19/39 (48%) Frame = -3 Query: 491 HGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAV 375 H G RV LRL PG+G PG R GP +AV Sbjct: 233 HRGRRVKALRLRPEPGEGE------PGVVARVGPEGVAV 265
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 30.0 bits (66), Expect = 4.1 Identities = 17/30 (56%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = -3 Query: 449 PG-QGRPVLPGAPGAAVRQGPGRLAVPDVR 363 PG QG P LPG PGAAV PG P R Sbjct: 376 PGIQGPPGLPGPPGAAVMGPPGPPGFPGER 405
>VNS3_RSVT (P26658) Nonstructural protein NS3| Length = 211 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +3 Query: 189 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 311 +H K PE + PT + F+ EV PPS NCW C Sbjct: 84 SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123
>VNS3_RSVM (Q01210) Nonstructural protein NS3| Length = 211 Score = 30.0 bits (66), Expect = 4.1 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +3 Query: 189 THCKK*PERKKAKPTRRLP*MSSVFWPEVSELPPSPNCWFC 311 +H K PE + PT + F+ EV PPS NCW C Sbjct: 84 SHDKNLPEEYRL-PTIMMSSSYVKFFTEVKPRPPSTNCWTC 123
>MEF2B_HUMAN (Q02080) Myocyte-specific enhancer factor 2B (Serum response| factor-like protein 2) (XMEF2) (RSRFR2) Length = 365 Score = 30.0 bits (66), Expect = 4.1 Identities = 14/45 (31%), Positives = 17/45 (37%) Frame = +1 Query: 388 PGPWRTAAPGAPGRTGLPWPXXXXXXXXXXXAPPCSAPRTAPRTG 522 PGPW++ P G PWP P +P TA G Sbjct: 307 PGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGTARARG 351
>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor| Length = 680 Score = 29.6 bits (65), Expect = 5.4 Identities = 20/53 (37%), Positives = 22/53 (41%) Frame = -3 Query: 524 PPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAVPDV 366 PP RG H G P P +PG G P L G PG GP + P V Sbjct: 64 PPGPAGPRG--HPGPSGP----PGKPGYGSPGLQGEPGLPGPPGPSAVGKPGV 110
>HPRK_LEPIN (Q8F3J9) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)| (HPrK/P) (HPr(Ser) kinase/phosphorylase) Length = 321 Score = 29.6 bits (65), Expect = 5.4 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = -3 Query: 485 GARVPVLRLPVRPGQGRPVL 426 G ++P++R+PVRPG+ P++ Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279
>HPRK_LEPIC (Q72S40) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)| (HPrK/P) (HPr(Ser) kinase/phosphorylase) Length = 321 Score = 29.6 bits (65), Expect = 5.4 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = -3 Query: 485 GARVPVLRLPVRPGQGRPVL 426 G ++P++R+PVRPG+ P++ Sbjct: 260 GVQIPLIRVPVRPGRNIPII 279
>PROZ_BOVIN (P00744) Vitamin K-dependent protein Z| Length = 396 Score = 29.6 bits (65), Expect = 5.4 Identities = 22/53 (41%), Positives = 26/53 (49%) Frame = -3 Query: 503 RGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAVPDVRRGAVLL 345 RGA G AR VR +G L G GAA +GPG L + V R A+ L Sbjct: 300 RGAAAGAARWVAGGAVVREHRGAWFLTGLLGAAPPEGPGPLLLIKVPRYALWL 352
>SIRT1_HUMAN (Q96EB6) NAD-dependent deacetylase sirtuin-1 (EC 3.5.1.-) (hSIRT1)| (hSIR2) (SIR2-like protein 1) Length = 747 Score = 28.9 bits (63), Expect = 9.2 Identities = 22/56 (39%), Positives = 24/56 (42%) Frame = -3 Query: 524 PPVRGAVRGAEHGGARVPVLRLPVRPGQGRPVLPGAPGAAVRQGPGRLAVPDVRRG 357 P GA R A A P+ + P R G G PG PG A P R VP RG Sbjct: 15 PSAAGADREAASSPAGEPLRKRPRRDGPGLERSPGEPGGA---APER-EVPAAARG 66
>OPAP_DROME (P23488) Male-specific opa-containing protein precursor (Protein| dromsopa) Length = 83 Score = 28.9 bits (63), Expect = 9.2 Identities = 17/50 (34%), Positives = 20/50 (40%) Frame = +1 Query: 382 NRPGPWRTAAPGAPGRTGLPWPXXXXXXXXXXXAPPCSAPRTAPRTGGGQ 531 N P P AAP A P APP +AP+ AP G G+ Sbjct: 26 NLPAPEAAAAPPAAAAA----PPAAAAAPPAPPAPPAAAPQAAPAGGSGR 71
>SYFB_THETH (P27002) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 785 Score = 28.9 bits (63), Expect = 9.2 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS-KSVEIAGFAQ 308 V E R G ++ + + +P+P G+ FA+V + P + D+ ++VE+ A+ Sbjct: 20 VLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGTRLKRLVLDAGRTVEVVSGAE 79 Query: 307 NQQFGLG 287 N + G+G Sbjct: 80 NARKGIG 86
>SYFB_THET8 (Q5SGX1) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 785 Score = 28.9 bits (63), Expect = 9.2 Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -1 Query: 484 VHECRSCGYLYDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSFFDS-KSVEIAGFAQ 308 V E R G ++ + + +P+P G+ FA+V + P + D+ ++VE+ A+ Sbjct: 20 VLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGTRLKRLVLDAGRTVEVVSGAE 79 Query: 307 NQQFGLG 287 N + G+G Sbjct: 80 NARKGIG 86
>DPOE_ASPFU (Q4WXH8) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2230 Score = 28.9 bits (63), Expect = 9.2 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 2/80 (2%) Frame = -1 Query: 520 RFEEQFAVLNTGVHECRSCGYL--YDQAKGDPSYPVPPGLPFAKVPDDWRCPTCGAAQSF 347 RFE A L C +C + D + + P P P WRCP C Q+ Sbjct: 2086 RFENPGASLKLPELSCNACCLIRDLDLCRDEDVLPEMGSDPNKAAPKPWRCPFC---QTE 2142 Query: 346 FDSKSVEIAGFAQNQQFGLG 287 +D + E A Q Q +G Sbjct: 2143 YDRLAQEEALIGQVQGLIVG 2162
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 28.9 bits (63), Expect = 9.2 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -3 Query: 446 GQGRPVLPGAPGAAVRQGPGRLAVP 372 G G+P LPGAPG A GP L P Sbjct: 205 GVGQPGLPGAPGQAGAPGPPGLPGP 229
>VPS27_YEAST (P40343) Vacuolar protein sorting-associated protein VPS27| Length = 622 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -1 Query: 511 EQFAVLNTGVHECRSCGYLYDQAKGDPSYPVP 416 ++F++LN H CRSCG ++ Q S P+P Sbjct: 181 KKFSLLNRK-HHCRSCGGVFCQEHSSNSIPLP 211
>POLG_BVDVN (P19711) Genome polyprotein [Contains: N-terminal protease (EC| 3.4.22.-) (N-pro) (Autoprotease p20); Capsid protein C; E(rns) glycoprotein (gp44/48); Envelope glycoprotein E1 (gp33); Envelope glycoprotein E2 (gp55); p7; Nonstructural protein 2 Length = 3988 Score = 28.9 bits (63), Expect = 9.2 Identities = 9/31 (29%), Positives = 17/31 (54%) Frame = -1 Query: 511 EQFAVLNTGVHECRSCGYLYDQAKGDPSYPV 419 +Q + C+ CGY + +++G P YP+ Sbjct: 885 DQLLYKGGSIESCKWCGYQFKESEGLPHYPI 915 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,960,421 Number of Sequences: 219361 Number of extensions: 1350664 Number of successful extensions: 7025 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 4924 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6862 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
