No.
Definition
Score (bits)
E Value
1 ref|NM_197489.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
2 gb|AF309380.1| Oryza sativa (japonica cultivar-group) clone C242...
54
6e-04
3 gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno...
54
6e-04
4 gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno...
54
6e-04
5 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
54
6e-04
6 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
54
6e-04
7 ref|NM_197476.1| Oryza sativa (japonica cultivar-group) putative...
52
0.002
8 gb|AF309379.1| Oryza sativa (japonica cultivar-group) clone S214...
52
0.002
9 gb|AY271620.1| Oryza sativa (indica cultivar-group) tau class GS...
52
0.002
10 dbj|AK073944.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
11 dbj|AK061304.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
12 ref|NM_197498.1| Oryza sativa (japonica cultivar-group) putative...
50
0.010
13 dbj|AK109314.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.010
14 ref|NM_197485.1| Oryza sativa (japonica cultivar-group) putative...
48
0.039
15 ref|NM_197484.1| Oryza sativa (japonica cultivar-group) putative...
48
0.039
16 ref|NM_197474.1| Oryza sativa (japonica cultivar-group) putative...
48
0.039
17 gb|AY389775.1| Hyacinthus orientalis glutathione-S transferase m...
48
0.039
18 gb|AF402805.1| Oryza sativa (japonica cultivar-group) clone RICS...
48
0.039
19 gb|AF402796.1| Oryza sativa (japonica cultivar-group) clone C110...
48
0.039
20 gb|AF402794.1| Oryza sativa (japonica cultivar-group) clone RICS...
48
0.039
21 gb|AF244707.1|AF244707 Zea mays glutathione S-transferase GST 42...
48
0.039
22 dbj|AK106212.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.039
23 dbj|AK103309.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.039
24 dbj|AK060931.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.039
25 dbj|AK059882.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.039
26 gb|AY107788.1| Zea mays PCO100973 mRNA sequence
48
0.039
27 ref|NM_197460.1| Oryza sativa (japonica cultivar-group) putative...
46
0.15
28 gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...
46
0.15
29 dbj|AK107435.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
30 gb|AF244701.1|AF244701 Zea mays glutathione S-transferase GST 36...
44
0.61
31 ref|XM_752924.1| Ustilago maydis 521 hypothetical protein (UM018...
42
2.4
32 emb|Z84486.1|HS528L19 Human DNA sequence from clone RP3-528L19 o...
42
2.4
33 gb|BT009350.1| Triticum aestivum clone wlm96.pk0012.f5:fis, full...
42
2.4
34 emb|AJ414701.1|TAE414701 Triticum aestivum mRNA for glutathione ...
42
2.4
35 emb|AL732511.6| Zebrafish DNA sequence from clone CH211-140G4 in...
42
2.4
36 gb|AC124043.2| Homo sapiens chromosome 3 clone RP11-143A18, comp...
42
2.4
37 ref|XM_510687.1| PREDICTED: Pan troglodytes similar to high-mobi...
40
9.5
38 ref|NM_197490.1| Oryza sativa (japonica cultivar-group) putative...
40
9.5
39 ref|NM_197473.1| Oryza sativa (japonica cultivar-group) putative...
40
9.5
40 ref|NM_197462.1| Oryza sativa (japonica cultivar-group) putative...
40
9.5
41 gb|AC102523.9| Mus musculus chromosome 15, clone RP24-184F9, com...
40
9.5
42 gb|BC021959.1| Homo sapiens high-mobility group 20A, mRNA (cDNA ...
40
9.5
43 gb|AF402799.1| Oryza sativa (japonica cultivar-group) clone RICS...
40
9.5
44 emb|CR714599.2|CNS0GEC3 Tetraodon nigroviridis full-length cDNA
40
9.5
45 ref|NM_018200.2| Homo sapiens high-mobility group 20A (HMG20A), ...
40
9.5
46 gb|CP000320.1| Nitrobacter hamburgensis X14 plasmid 1, complete ...
40
9.5
47 emb|AL355737.1|IRO548013 Homo sapiens mRNA full length insert cD...
40
9.5
48 gb|BT007980.1| Synthetic construct Homo sapiens high-mobility gr...
40
9.5
49 gb|BT006716.1| Homo sapiens high-mobility group 20A mRNA, comple...
40
9.5
50 emb|CR769774.8| Zebrafish DNA sequence from clone DKEY-149I17 in...
40
9.5
51 emb|BX511108.6| Zebrafish DNA sequence from clone DKEY-18F15 in ...
40
9.5
52 gb|AF146222.1| Homo sapiens HMG domain protein HMGX1 (HMGX1) mRN...
40
9.5
53 dbj|AK001601.1| Homo sapiens cDNA FLJ10739 fis, clone NT2RP30014...
40
9.5
54 gb|DQ393784.1| Pseudomonas aeruginosa strain N2-1 class I integr...
40
9.5
55 gb|AC090984.5| Homo sapiens chromosome 15, clone RP11-500C12, co...
40
9.5
56 dbj|AK223100.1| Homo sapiens mRNA for high-mobility group 20A va...
40
9.5
57 gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple...
40
9.5
58 gb|AF244691.1|AF244691 Zea mays glutathione S-transferase GST 26...
40
9.5
59 gb|AY891624.1| Synthetic construct Homo sapiens clone FLH110896....
40
9.5
60 gb|AY891623.1| Synthetic construct Homo sapiens clone FLH110895....
40
9.5
61 gb|AY889043.1| Synthetic construct Homo sapiens clone FLH110899....
40
9.5
62 gb|AY889042.1| Synthetic construct Homo sapiens clone FLH110898....
40
9.5
63 dbj|AK108376.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.5
64 dbj|AK102196.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.5
65 dbj|AK063773.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.5
66 gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
40
9.5
67 emb|AL831714.14| Mouse DNA sequence from clone RP23-311D24 on ch...
40
9.5
>gb|AC091680.7 | Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
sequence
Length = 148611
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
|||||||||||||||||||| ||||||||||
Sbjct: 26067 tcaatgtaggcggcccagaagcgagcgacgg 26097
Score = 52.0 bits (26), Expect = 0.002
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgggcacgttggtaggggtcg 620
||||||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 67392 atgtaggcggcccagaagcgagcgac-ggcacggtcgtaggggtcg 67436
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 73340 atgtaggcggcccagaagcgagcgacgg 73367
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 37210 atgtaggcggcccagaagcgagcgacgg 37237
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 34401 atgtaggcggcccagaagcgagcgacgg 34428
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
||||||||||| |||||||| ||||||||||
Sbjct: 138255 tcaatgtaggcagcccagaagcgagcgacgg 138285
Score = 40.1 bits (20), Expect = 9.5
Identities = 45/52 (86%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 581 gcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcagg 632
||||||||||| |||||||| ||| |||| || ||||||| | |||||||||
Sbjct: 128963 gcggcccagaagcgagcgac-ggcgcgttcgtgggggtcggcggggagcagg 129013
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 579 aggcggcccagaaccgagcgacgg 602
||||||||||||| ||||||||||
Sbjct: 75767 aggcggcccagaagcgagcgacgg 75790
Score = 40.1 bits (20), Expect = 9.5
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 ctgagcacgtttcatcttggcaaactcaacca 244
|||| |||| ||||||||||||||||| ||||
Sbjct: 25635 ctgaacacgcttcatcttggcaaactcgacca 25666
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcg 598
||||||||||||||||| ||||||
Sbjct: 23288 atgtaggcggcccagaagcgagcg 23311
>gb|AC113948.5 | Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
sequence
Length = 132900
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
|||||||||||||||||||| ||||||||||
Sbjct: 84368 tcaatgtaggcggcccagaagcgagcgacgg 84398
Score = 52.0 bits (26), Expect = 0.002
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgggcacgttggtaggggtcg 620
||||||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 125693 atgtaggcggcccagaagcgagcgac-ggcacggtcgtaggggtcg 125737
Score = 50.1 bits (25), Expect = 0.010
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 579 aggcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcag 631
||||||||||||| |||||||| ||| || |||||||||||| | ||||||||
Sbjct: 56224 aggcggcccagaagcgagcgac-ggcgcggtggtaggggtcggcggggagcag 56275
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 131641 atgtaggcggcccagaagcgagcgacgg 131668
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 95511 atgtaggcggcccagaagcgagcgacgg 95538
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 92702 atgtaggcggcccagaagcgagcgacgg 92729
Score = 40.1 bits (20), Expect = 9.5
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 213 ctgagcacgtttcatcttggcaaactcaacca 244
|||| |||| ||||||||||||||||| ||||
Sbjct: 83936 ctgaacacgcttcatcttggcaaactcgacca 83967
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 575 atgtaggcggcccagaaccgagcg 598
||||||||||||||||| ||||||
Sbjct: 81589 atgtaggcggcccagaagcgagcg 81612
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
|||||||||||||||||||| ||||||||||
Sbjct: 20082123 tcaatgtaggcggcccagaagcgagcgacgg 20082093
Score = 52.0 bits (26), Expect = 0.002
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgggcacgttggtaggggtcg 620
||||||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 20040798 atgtaggcggcccagaagcgagcgac-ggcacggtcgtaggggtcg 20040754
Score = 50.1 bits (25), Expect = 0.010
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 579 aggcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcag 631
||||||||||||| |||||||| ||| || |||||||||||| | ||||||||
Sbjct: 20110267 aggcggcccagaagcgagcgac-ggcgcggtggtaggggtcggcggggagcag 20110216
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20073789 atgtaggcggcccagaagcgagcgacgg 20073762
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20070980 atgtaggcggcccagaagcgagcgacgg 20070953
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20034850 atgtaggcggcccagaagcgagcgacgg 20034823
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
||||||||||| |||||||| ||||||||||
Sbjct: 19969935 tcaatgtaggcagcccagaagcgagcgacgg 19969905
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcg 598
||||||||||||||||| ||||||
Sbjct: 20084902 atgtaggcggcccagaagcgagcg 20084879
Score = 40.1 bits (20), Expect = 9.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 213 ctgagcacgtttcatcttggcaaactcaacca 244
|||| |||| ||||||||||||||||| ||||
Sbjct: 20082555 ctgaacacgcttcatcttggcaaactcgacca 20082524
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 579 aggcggcccagaaccgagcgacgg 602
||||||||||||| ||||||||||
Sbjct: 20032423 aggcggcccagaagcgagcgacgg 20032400
Score = 40.1 bits (20), Expect = 9.5
Identities = 45/52 (86%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 581 gcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcagg 632
||||||||||| |||||||| ||| |||| || ||||||| | |||||||||
Sbjct: 19979227 gcggcccagaagcgagcgac-ggcgcgttcgtgggggtcggcggggagcagg 19979177
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 54.0 bits (27), Expect = 6e-04
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
|||||||||||||||||||| ||||||||||
Sbjct: 20093399 tcaatgtaggcggcccagaagcgagcgacgg 20093369
Score = 52.0 bits (26), Expect = 0.002
Identities = 42/46 (91%), Gaps = 1/46 (2%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgggcacgttggtaggggtcg 620
||||||||||||||||| |||||||| |||||| | ||||||||||
Sbjct: 20052074 atgtaggcggcccagaagcgagcgac-ggcacggtcgtaggggtcg 20052030
Score = 50.1 bits (25), Expect = 0.010
Identities = 47/53 (88%), Gaps = 1/53 (1%)
Strand = Plus / Minus
Query: 579 aggcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcag 631
||||||||||||| |||||||| ||| || |||||||||||| | ||||||||
Sbjct: 20121543 aggcggcccagaagcgagcgac-ggcgcggtggtaggggtcggcggggagcag 20121492
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20085065 atgtaggcggcccagaagcgagcgacgg 20085038
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20082256 atgtaggcggcccagaagcgagcgacgg 20082229
Score = 48.1 bits (24), Expect = 0.039
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcgacgg 602
||||||||||||||||| ||||||||||
Sbjct: 20046126 atgtaggcggcccagaagcgagcgacgg 20046099
Score = 46.1 bits (23), Expect = 0.15
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 572 tcaatgtaggcggcccagaaccgagcgacgg 602
||||||||||| |||||||| ||||||||||
Sbjct: 19981211 tcaatgtaggcagcccagaagcgagcgacgg 19981181
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 575 atgtaggcggcccagaaccgagcg 598
||||||||||||||||| ||||||
Sbjct: 20096178 atgtaggcggcccagaagcgagcg 20096155
Score = 40.1 bits (20), Expect = 9.5
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 213 ctgagcacgtttcatcttggcaaactcaacca 244
|||| |||| ||||||||||||||||| ||||
Sbjct: 20093831 ctgaacacgcttcatcttggcaaactcgacca 20093800
Score = 40.1 bits (20), Expect = 9.5
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 579 aggcggcccagaaccgagcgacgg 602
||||||||||||| ||||||||||
Sbjct: 20043699 aggcggcccagaagcgagcgacgg 20043676
Score = 40.1 bits (20), Expect = 9.5
Identities = 45/52 (86%), Gaps = 1/52 (1%)
Strand = Plus / Minus
Query: 581 gcggcccagaaccgagcgacgggcacgttggtaggggtcgccagggagcagg 632
||||||||||| |||||||| ||| |||| || ||||||| | |||||||||
Sbjct: 19990503 gcggcccagaagcgagcgac-ggcgcgttcgtgggggtcggcggggagcagg 19990453
>emb|AL831714.14 | Mouse DNA sequence from clone RP23-311D24 on chromosome 4, complete
sequence
Length = 120815
Score = 40.1 bits (20), Expect = 9.5
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 95 tttgacatctttcatggcgc 114
||||||||||||||||||||
Sbjct: 30894 tttgacatctttcatggcgc 30913
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,121,266
Number of Sequences: 3902068
Number of extensions: 5121266
Number of successful extensions: 99810
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 99462
Number of HSP's gapped (non-prelim): 346
length of query: 692
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 669
effective length of database: 17,143,297,704
effective search space: 11468866163976
effective search space used: 11468866163976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)