Clone Name
rbasd20o11
Clone Library Name
barley_pub
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512|
(EC 4.1.1.39) (RuBisCO small subunit) (Fragment)
Length = 113
Score = 209 bits (531), Expect(2) = 3e-57
Identities = 95/96 (98%), Positives = 96/96 (100%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQV+NEVEEVKKE
Sbjct: 18 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKE 77
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA
Sbjct: 78 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 113
Score = 32.7 bits (73), Expect(2) = 3e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST ALLKQVDYL
Sbjct: 3 LPPLSTEALLKQVDYL 18
>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 174
Score = 208 bits (530), Expect(2) = 4e-57
Identities = 95/96 (98%), Positives = 96/96 (100%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE
Sbjct: 79 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 138
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
YPDAYVRIIGFDNMRQVQCVSFIAFKPPGC+ESGKA
Sbjct: 139 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCQESGKA 174
Score = 32.7 bits (73), Expect(2) = 4e-57
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST ALLKQVDYL
Sbjct: 64 LPPLSTEALLKQVDYL 79
>RBS2_WHEAT (P26667) Ribulose bisphosphate carboxylase small chain PW9,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit PW9)
Length = 175
Score = 206 bits (525), Expect(2) = 2e-56
Identities = 92/96 (95%), Positives = 96/96 (100%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE
Sbjct: 80 LIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 139
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
YPDAYVR+IGFDNMRQVQCVSFIAF+PPGCEESGKA
Sbjct: 140 YPDAYVRVIGFDNMRQVQCVSFIAFRPPGCEESGKA 175
Score = 32.7 bits (73), Expect(2) = 2e-56
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST ALLKQVDYL
Sbjct: 65 LPPLSTEALLKQVDYL 80
>RBS1_WHEAT (P00871) Ribulose bisphosphate carboxylase small chain PWS4.3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit PWS4.3)
Length = 174
Score = 205 bits (522), Expect(2) = 2e-55
Identities = 91/96 (94%), Positives = 96/96 (100%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIRSKWVPCLEFSKVGF+FREHN+SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE
Sbjct: 79 LIRSKWVPCLEFSKVGFVFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 138
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
YPDAYVR+IGFDN+RQVQCVSFIAF+PPGCEESGKA
Sbjct: 139 YPDAYVRVIGFDNLRQVQCVSFIAFRPPGCEESGKA 174
Score = 30.4 bits (67), Expect(2) = 2e-55
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST AL KQVDYL
Sbjct: 64 LPPLSTEALSKQVDYL 79
>RBS_AEGTA (Q38793) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 175
Score = 183 bits (464), Expect(2) = 5e-49
Identities = 84/96 (87%), Positives = 86/96 (89%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIRSKWVPCLEF KVGFIFREHN SPGYYDGRYWTMWKLPMFGC TQV+ EVEEV+KE
Sbjct: 80 LIRSKWVPCLEFRKVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKE 139
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
YPD Y RIIGFDNMRQVQ VSFIA KPPGCEESGKA
Sbjct: 140 YPDPYCRIIGFDNMRQVQSVSFIASKPPGCEESGKA 175
Score = 31.2 bits (69), Expect(2) = 5e-49
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST LLKQVDYL
Sbjct: 65 LPPLSTEGLLKQVDYL 80
>RBS3_ORYSA (P18567) Ribulose bisphosphate carboxylase small chain C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit C)
Length = 175
Score = 181 bits (460), Expect(2) = 7e-47
Identities = 79/94 (84%), Positives = 89/94 (94%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK
Sbjct: 80 LLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKA 139
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 249
YPDA+VRIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 140 YPDAFVRIIGFDNVRQVQLISFIAYKPPGCEESG 173
Score = 25.4 bits (54), Expect(2) = 7e-47
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ LLKQ++YL
Sbjct: 65 LPPLTVEDLLKQIEYL 80
>RBS2_ORYSA (P18566) Ribulose bisphosphate carboxylase small chain A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit A)
Length = 175
Score = 181 bits (459), Expect(2) = 9e-47
Identities = 78/94 (82%), Positives = 89/94 (94%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+RSKWVPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK
Sbjct: 80 LLRSKWVPCLEFSKVGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKA 139
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESG 249
YPDA++RIIGFDN+RQVQ +SFIA+KPPGCEESG
Sbjct: 140 YPDAFIRIIGFDNVRQVQLISFIAYKPPGCEESG 173
Score = 25.4 bits (54), Expect(2) = 9e-47
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ LLKQ++YL
Sbjct: 65 LPPLTVEDLLKQIEYL 80
>RBS1_ORYSA (P05347) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 172
Score = 159 bits (402), Expect(2) = 8e-42
Identities = 71/88 (80%), Positives = 81/88 (92%)
Frame = -3
Query: 512 VPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYV 333
VPCLEFSKVGF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQV+ E+EE KK YPDA+V
Sbjct: 84 VPCLEFSKVGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVVKELEEAKKAYPDAFV 143
Query: 332 RIIGFDNMRQVQCVSFIAFKPPGCEESG 249
RIIGFDN+RQVQ +SFIA+ PGCEESG
Sbjct: 144 RIIGFDNVRQVQLISFIAYN-PGCEESG 170
Score = 30.8 bits (68), Expect(2) = 8e-42
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYLDPLQV 514
LPPL+ LLKQ++YL P QV
Sbjct: 63 LPPLTVEDLLKQIEYLAPFQV 83
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU1)
Length = 173
Score = 160 bits (404), Expect(2) = 2e-40
Identities = 68/87 (78%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE+NASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 86 LLRNDWVPCIEFSKEGFVYRENNASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 145
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 146 YPEYFVRIIGFDNKRQVQCISFIAYKP 172
Score = 25.4 bits (54), Expect(2) = 2e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 71 LPPLSVEDLAKEVDYL 86
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU5B)
Length = 177
Score = 158 bits (399), Expect(2) = 7e-40
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 90 LLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 149
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 150 YPEYFVRIIGFDNKRQVQCISFIAYKP 176
Score = 25.4 bits (54), Expect(2) = 7e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 75 LPPLSVEDLAKEVDYL 90
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU5A)
Length = 177
Score = 158 bits (399), Expect(2) = 7e-40
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 90 LLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 149
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 150 YPEYFVRIIGFDNKRQVQCISFIAYKP 176
Score = 25.4 bits (54), Expect(2) = 7e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 75 LPPLSVEDLAKEVDYL 90
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU40B)
Length = 177
Score = 158 bits (399), Expect(2) = 7e-40
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 90 LLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 149
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 150 YPEYFVRIIGFDNKRQVQCISFIAYKP 176
Score = 25.4 bits (54), Expect(2) = 7e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 75 LPPLSVEDLAKEVDYL 90
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU40A)
Length = 177
Score = 158 bits (399), Expect(2) = 7e-40
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 90 LLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 149
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 150 YPEYFVRIIGFDNKRQVQCISFIAYKP 176
Score = 25.4 bits (54), Expect(2) = 7e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 75 LPPLSVEDLAKEVDYL 90
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU26)
Length = 177
Score = 158 bits (399), Expect(2) = 7e-40
Identities = 67/87 (77%), Positives = 80/87 (91%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPC+EFSK GF++RE++ASPGYYDGRYWTMWKLPMFGCTDA+QV+ EVEE KK
Sbjct: 90 LLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKA 149
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ +VRIIGFDN RQVQC+SFIA+KP
Sbjct: 150 YPEYFVRIIGFDNKRQVQCISFIAYKP 176
Score = 25.4 bits (54), Expect(2) = 7e-40
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS L K+VDYL
Sbjct: 75 LPPLSVEDLAKEVDYL 90
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 155 bits (393), Expect(2) = 2e-39
Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
LIR+KW+PCLEF + GF++REH+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ EV E KK
Sbjct: 90 LIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP+A++R+IGFDN+RQVQC+SFI KPPG
Sbjct: 150 EYPNAFIRVIGFDNIRQVQCISFIVAKPPG 179
Score = 26.6 bits (57), Expect(2) = 2e-39
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS AL K++DYL
Sbjct: 75 LPPLSDEALSKEIDYL 90
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 180
Score = 155 bits (391), Expect(2) = 3e-39
Identities = 68/90 (75%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ +KWVPCLEF + GF++REH+ SPGYYDGRYWTMWKLPMFGCTD QVLNE+EE KK
Sbjct: 90 LLNNKWVPCLEFETDHGFVYREHHNSPGYYDGRYWTMWKLPMFGCTDPAQVLNELEECKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP+A++RIIGFD+ RQVQCVSFIA+KP G
Sbjct: 150 EYPNAFIRIIGFDSNRQVQCVSFIAYKPAG 179
Score = 26.6 bits (57), Expect(2) = 3e-39
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+T L +QVDYL
Sbjct: 75 LPPLTTDQLARQVDYL 90
>RBS_MUSAC (O24045) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 158 bits (400), Expect(2) = 6e-39
Identities = 68/89 (76%), Positives = 78/89 (87%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+RSKW+PCLEF GF++RE++ SPGYYDGRYWTMWKLPMFGCTDA QV EVEE KKE
Sbjct: 91 LLRSKWIPCLEFCPKGFVWRENHRSPGYYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKE 150
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN RQVQC+SFIA+KP G
Sbjct: 151 YPHAFIRIIGFDNNRQVQCISFIAYKPTG 179
Score = 21.9 bits (45), Expect(2) = 6e-39
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LP + AL+KQ++YL
Sbjct: 76 LPTMKDEALVKQIEYL 91
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 8B)
Length = 180
Score = 158 bits (400), Expect = 9e-39
Identities = 72/96 (75%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L++S WVPCLEF ++ GF++REH+ SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEIEYLLKSGWVPCLEFETERGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEE KK YP A+VRIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 150 bits (380), Expect(2) = 1e-38
Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + GF++RE++ SPGYYDGRYWTMWKLPMFGCTD++QVL E+EE KK
Sbjct: 93 LLRKNWVPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKK 152
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP +++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 153 AYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
Score = 28.5 bits (62), Expect(2) = 1e-38
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLST +L K+VDYL
Sbjct: 78 LPPLSTESLAKEVDYL 93
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 152 bits (383), Expect(2) = 2e-38
Identities = 64/90 (71%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + GF++RE++ SPGYYDGRYWTMWKLPMFGCTD++QVL E+EE KK
Sbjct: 93 LLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKK 152
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP +++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 153 AYPQSFIRIIGFDNVRQVQCISFIAYKPAG 182
Score = 26.9 bits (58), Expect(2) = 2e-38
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS+ +L K+VDYL
Sbjct: 78 LPPLSSESLAKEVDYL 93
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1A)
Length = 180
Score = 157 bits (397), Expect = 2e-38
Identities = 67/89 (75%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
LIR+KW+PC+EF + GF++REH SPGYYDGRYWTMWKLP+FGCTD+ QVL EVEE KK
Sbjct: 88 LIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
EYP+A++RIIGFDN RQVQC+SFIA+KPP
Sbjct: 148 EYPNAFIRIIGFDNTRQVQCISFIAYKPP 176
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
(TSSU3-8)
Length = 180
Score = 156 bits (395), Expect = 3e-38
Identities = 70/96 (72%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEE KK YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 156 bits (395), Expect = 3e-38
Identities = 70/96 (72%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEE KK YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VEEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1) (LESS17)
Length = 181
Score = 156 bits (395), Expect = 3e-38
Identities = 70/96 (72%), Positives = 84/96 (87%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE+N+SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 85 LSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAE 144
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
V+E KK YP A+VRIIGFDN+RQVQC+SFIA+KP G
Sbjct: 145 VQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 180
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2A) (LESS 5)
Length = 180
Score = 155 bits (393), Expect = 6e-38
Identities = 70/96 (72%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEIEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
V+E KK YP A+VRIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3B)
Length = 181
Score = 155 bits (393), Expect = 6e-38
Identities = 66/94 (70%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWKLP+FGCTD+ QVL EVEE KK
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
EYP A++RIIGFDN RQVQC+SFIA+KPP E+
Sbjct: 148 EYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2B)
Length = 181
Score = 155 bits (393), Expect = 6e-38
Identities = 66/94 (70%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWKLP+FGCTD+ QVL EVEE KK
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
EYP A++RIIGFDN RQVQC+SFIA+KPP E+
Sbjct: 148 EYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTEA 181
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 187
Score = 155 bits (392), Expect = 8e-38
Identities = 67/88 (76%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L++ WVPCLEF ++ GF++REH+ SPGYYDGRYWTMWKLPMFGCTDATQVLNEV+E KK
Sbjct: 90 LLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++RIIGFDN+RQVQC+SFIA+KP
Sbjct: 150 AYPQAWIRIIGFDNVRQVQCISFIAYKP 177
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2C)
Length = 180
Score = 155 bits (392), Expect = 8e-38
Identities = 68/90 (75%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL EVEE KK
Sbjct: 90 LLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 150 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2B)
Length = 180
Score = 155 bits (392), Expect = 8e-38
Identities = 68/90 (75%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL EVEE KK
Sbjct: 90 LLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 150 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2A)
Length = 180
Score = 155 bits (392), Expect = 8e-38
Identities = 68/90 (75%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL EVEE KK
Sbjct: 90 LLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 150 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 179
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit S41)
Length = 181
Score = 155 bits (392), Expect = 8e-38
Identities = 68/90 (75%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE+N SPGYYDGRYWTMWKLPMFGCTDATQVL EVEE KK
Sbjct: 91 LLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKK 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 151 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 155 bits (391), Expect = 1e-37
Identities = 68/94 (72%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++REH +SPGYYDGRYWTMWKLPMFGCTDATQV E
Sbjct: 84 LSEIEYLLKNGWVPCLEFETEHGFVYREHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
V+E KK YPDA++RIIGFDN+RQVQC+SFIA+KP
Sbjct: 144 VQEAKKAYPDAHIRIIGFDNVRQVQCISFIAYKP 177
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1B)
Length = 181
Score = 154 bits (390), Expect = 1e-37
Identities = 65/89 (73%), Positives = 79/89 (88%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH +PGYYDGRYWTMWKLP+FGCTD+ QVL EVEE KK
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
EYP A++RIIGFDN RQVQC+SFIA+KPP
Sbjct: 148 EYPGAFIRIIGFDNTRQVQCISFIAYKPP 176
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 170
Score = 154 bits (389), Expect = 2e-37
Identities = 64/91 (70%), Positives = 79/91 (86%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ W+PCLEFSKVGF++RE++ SP YYDGRYWTMWKLPMFGC DATQV E++E K
Sbjct: 80 LLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKS 139
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCE 258
YPDA+ R+IGFDN++Q QCVSFIA+KPPG +
Sbjct: 140 YPDAFHRVIGFDNIKQTQCVSFIAYKPPGSD 170
Score = 31.6 bits (70), Expect = 1.7
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYLDPLQVGALPRVQQGWVHLP*AQRISWVLR 442
LPPLST LLKQVDYL ++ GW+ ++ +V R
Sbjct: 65 LPPLSTDDLLKQVDYL----------LRNGWIPCLEFSKVGFVYR 99
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit C)
Length = 181
Score = 154 bits (389), Expect = 2e-37
Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++REHN+SPGYYDGRYWTMWKLPMFGCTD TQVL EV+E K
Sbjct: 91 LLKNGWVPCLEFETEHGFVYREHNSSPGYYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKN 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 151 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3B)
Length = 180
Score = 154 bits (388), Expect = 2e-37
Identities = 69/96 (71%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
V+E KK YP A+VRIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3A/3C)
Length = 180
Score = 154 bits (388), Expect = 2e-37
Identities = 69/96 (71%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
LS L+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E
Sbjct: 84 LSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
V+E KK YP A+VRIIGFDN+RQVQC+SFIA+KP G
Sbjct: 144 VQEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEG 179
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU11A)
Length = 180
Score = 153 bits (387), Expect = 3e-37
Identities = 66/90 (73%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ WVPCLEF ++ GF++RE++ASP YYDGRYWTMWKLPMFGCTDATQVL E++E KK
Sbjct: 90 LLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP+A++RIIGFDN+RQVQC+SFIA+KPPG
Sbjct: 150 AYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU8)
Length = 180
Score = 153 bits (387), Expect = 3e-37
Identities = 66/90 (73%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ WVPCLEF ++ GF++RE++ASP YYDGRYWTMWKLPMFGCTDATQVL E++E KK
Sbjct: 90 LLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP+A++RIIGFDN+RQVQC+SFIA+KPPG
Sbjct: 150 AYPNAWIRIIGFDNVRQVQCISFIAYKPPG 179
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 153 bits (387), Expect = 3e-37
Identities = 64/89 (71%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ QVL EV+E KK
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
EYP+A +RIIGFDN RQVQC+SFIA+KPP
Sbjct: 148 EYPNALIRIIGFDNNRQVQCISFIAYKPP 176
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit F1)
Length = 181
Score = 152 bits (385), Expect = 5e-37
Identities = 63/89 (70%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ QVL EV+E K
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
EYP+A++RIIGFDN RQVQC+SFIA+KPP
Sbjct: 148 EYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 152 bits (385), Expect = 5e-37
Identities = 63/89 (70%), Positives = 80/89 (89%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KW+PC+EF + GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ QVL EV+E K
Sbjct: 88 LLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
EYP+A++RIIGFDN RQVQC+SFIA+KPP
Sbjct: 148 EYPNAFIRIIGFDNNRQVQCISFIAYKPP 176
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 152 bits (384), Expect = 7e-37
Identities = 64/89 (71%), Positives = 79/89 (88%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R W+PCLEF + GF++REH+ SPGYYDGRYWTMWKLPMFGCTDA+QVL E++E K
Sbjct: 88 LLRKGWIPCLEFELEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
YP+A++RIIGFDN+RQVQC+SFIA+KPP
Sbjct: 148 AYPNAFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 178
Score = 152 bits (384), Expect = 7e-37
Identities = 64/90 (71%), Positives = 78/90 (86%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R W+PCLEF + GF++REHN SP YYDGRYWTMWKLPMFGCTDA+QVL E++E K
Sbjct: 88 LLRKGWIPCLEFELEHGFVYREHNRSPXYYDGRYWTMWKLPMFGCTDASQVLKELQEAKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP+ ++RIIGFDN+RQVQC+SFIA+KPPG
Sbjct: 148 AYPNGFIRIIGFDNVRQVQCISFIAYKPPG 177
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 181
Score = 152 bits (384), Expect = 7e-37
Identities = 66/90 (73%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL EV+E KK
Sbjct: 91 LLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKK 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 151 AYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 181
Score = 152 bits (384), Expect = 7e-37
Identities = 66/90 (73%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEF-SKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+++ WVPCLEF ++ GF++RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL EV+E KK
Sbjct: 91 LLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQECKK 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 151 SYPQAWIRIIGFDNVRQVQCISFIAYKPEG 180
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 147 bits (371), Expect(2) = 7e-37
Identities = 64/90 (71%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R +PCLEF + GF++REHN SPGYYDGRYWTMWKLPMFGC D++QVL E+EE KK
Sbjct: 92 LLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YP A++RIIGFDN RQVQ +SFIA+KPPG
Sbjct: 152 AYPSAFIRIIGFDNKRQVQIISFIAYKPPG 181
Score = 26.2 bits (56), Expect(2) = 7e-37
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS+ L K+VDYL
Sbjct: 77 LPPLSSEQLAKEVDYL 92
>RBS_ZANAE (O48550) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 152 bits (383), Expect = 9e-37
Identities = 63/89 (70%), Positives = 77/89 (86%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIR+ W+PC+EF KVGF++RE++ SPGYYDGRYWTMWKLPMFGCTD++QVL EV+E K
Sbjct: 89 LIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKA 148
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
YPD + RIIGFDN RQVQC+SF+ +KP G
Sbjct: 149 YPDYFNRIIGFDNTRQVQCISFLTYKPEG 177
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 173
Score = 151 bits (382), Expect = 1e-36
Identities = 66/90 (73%), Positives = 80/90 (88%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ +SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQCVSFIA KP G
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCVSFIASKPTG 172
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 189
Score = 150 bits (379), Expect = 3e-36
Identities = 62/88 (70%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+ WVPC+EF GF++RE++ SPG+YDGRYWTMWKLPMFGCTD++QV+ E+EE KK
Sbjct: 92 LLRNGWVPCVEFDIGSGFVYRENHRSPGFYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
EYPDA++R+IGFDN+RQVQC+SFIA+KP
Sbjct: 152 EYPDAFIRVIGFDNVRQVQCISFIAYKP 179
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 178
Score = 150 bits (379), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 88 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 148 EYPQAWIRIIGFDNVRQVQCISFIASKPDG 177
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 178
Score = 150 bits (379), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 88 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 148 EYPQAWIRIIGFDNVRQVQCISFIASKPEG 177
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 7)
Length = 173
Score = 150 bits (379), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 173
Score = 150 bits (379), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 173
Score = 150 bits (379), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCISFIASKPDG 172
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 173
Score = 150 bits (378), Expect = 3e-36
Identities = 65/90 (72%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+SFIA KP G
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCISFIASKPGG 172
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 145 bits (367), Expect(2) = 6e-36
Identities = 63/90 (70%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E+ E KK
Sbjct: 88 LLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMKELAECKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP A++RIIGFDN+RQVQC+ FIA +P G
Sbjct: 148 EYPQAWIRIIGFDNVRQVQCIMFIASRPDG 177
Score = 24.6 bits (52), Expect(2) = 6e-36
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ L K+VDYL
Sbjct: 73 LPPLTETQLAKEVDYL 88
>RBS3_FRIAG (O22573) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 179
Score = 149 bits (375), Expect = 7e-36
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIR+ WVPCLEFS GF+ R++N SPGYYDGRYWTMWKLPMFGCTDA QV+ E E KKE
Sbjct: 92 LIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKE 151
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++R+IGFDN+RQVQCVSFI KP
Sbjct: 152 YPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS2_FRIAG (O22572) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 179
Score = 149 bits (375), Expect = 7e-36
Identities = 65/87 (74%), Positives = 74/87 (85%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIR+ WVPCLEFS GF+ R++N SPGYYDGRYWTMWKLPMFGCTDA QV+ E E KKE
Sbjct: 92 LIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKE 151
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++R+IGFDN+RQVQCVSFI KP
Sbjct: 152 YPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 178
Score = 149 bits (375), Expect = 7e-36
Identities = 63/89 (70%), Positives = 77/89 (86%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R W+PCLEF + GF++REHN S GYYDGRYWTMWKLPMFGCTDA+QVL E++E K
Sbjct: 88 LLRKGWIPCLEFELEHGFVYREHNRSLGYYDGRYWTMWKLPMFGCTDASQVLKELQEAKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
YP+ ++RIIGFDN+RQVQC+SFIA+KPP
Sbjct: 148 AYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6)
Length = 173
Score = 148 bits (374), Expect = 1e-35
Identities = 64/88 (72%), Positives = 78/88 (88%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R+KWVPCLEF + GF++RE+ SPGYYDGRYWTMWKLPMFGCTD+ QV+ E++E KK
Sbjct: 83 LLRNKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSVQVMKELQECKK 142
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
EYP A++RIIGFDN+RQVQC+SFIA KP
Sbjct: 143 EYPQAWIRIIGFDNVRQVQCISFIASKP 170
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 148 bits (373), Expect = 1e-35
Identities = 63/90 (70%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+RS W+PCLEF + G ++REH PGYYDGRYWTMWKLPMFGCTDA QVL E++E+ K
Sbjct: 92 LLRSGWIPCLEFELEHGLVYREHARVPGYYDGRYWTMWKLPMFGCTDAAQVLKELDELIK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
+PD Y RIIGFDN+RQVQC+SF+A+KPPG
Sbjct: 152 HHPDGYARIIGFDNVRQVQCISFLAYKPPG 181
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 148 bits (373), Expect = 1e-35
Identities = 63/90 (70%), Positives = 79/90 (87%), Gaps = 1/90 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+RSKW+PCLEF + GF+ R++++ P YYDGRYWTMWKLPMFGCTD+ QVL E+E KK
Sbjct: 92 LLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
EYP+A++RIIGFDN+RQVQC+SFIA+KP G
Sbjct: 152 EYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
>RBS1_FRIAG (O24634) Ribulose bisphosphate carboxylase small chain 1/4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1/4)
Length = 179
Score = 147 bits (372), Expect = 2e-35
Identities = 64/87 (73%), Positives = 74/87 (85%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIR+ WVPCLEFS GF+ R++N SPGYYDGRYWTMWKLPMFGCTDA QV+ E E KKE
Sbjct: 92 LIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKE 151
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++R+IGFDN+RQVQCVSFI +P
Sbjct: 152 YPAAFIRVIGFDNVRQVQCVSFIVERP 178
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 180
Score = 147 bits (372), Expect = 2e-35
Identities = 65/96 (67%), Positives = 79/96 (82%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
L++ L+ + W+PC+EF + F++RE++ SPGY DGRYWTMWKLPM+GCTD QVLNE
Sbjct: 84 LAQVQYLLNNGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNE 143
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEE KK YP A++RIIGFDN RQVQCVSFIAFKPPG
Sbjct: 144 VEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAFKPPG 179
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6)
Length = 186
Score = 147 bits (371), Expect = 2e-35
Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 94 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 153
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++RIIGFDN+RQVQCVSFIA+KP
Sbjct: 154 AYPEAFIRIIGFDNVRQVQCVSFIAYKP 181
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 182
Score = 147 bits (371), Expect = 2e-35
Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 90 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++RIIGFDN+RQVQCVSFIA+KP
Sbjct: 150 AYPEAFIRIIGFDNVRQVQCVSFIAYKP 177
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 183
Score = 147 bits (371), Expect = 2e-35
Identities = 63/88 (71%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 91 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++RIIGFDN+RQVQCVSFIA+KP
Sbjct: 151 AYPEAFIRIIGFDNVRQVQCVSFIAYKP 178
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 182
Score = 147 bits (370), Expect = 3e-35
Identities = 62/88 (70%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 90 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++RIIGFDN+RQVQC+SFIA+KP
Sbjct: 150 AYPEAFIRIIGFDNVRQVQCISFIAYKP 177
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 183
Score = 147 bits (370), Expect = 3e-35
Identities = 62/88 (70%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 91 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 150
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++RIIGFDN+RQVQC+SFIA+KP
Sbjct: 151 AYPEAFIRIIGFDNVRQVQCISFIAYKP 178
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 146 bits (369), Expect = 4e-35
Identities = 61/89 (68%), Positives = 78/89 (87%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R W+PCLEF + GF++RE++ SPGYYDGRYWTMWKLP+FGCTDA+QVL E++E K
Sbjct: 88 LLRKGWIPCLEFELEHGFVYRENHRSPGYYDGRYWTMWKLPVFGCTDASQVLKELQEAKT 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
YP+ ++RIIGFDN+RQVQC+SFIA+KPP
Sbjct: 148 AYPNGFIRIIGFDNVRQVQCISFIAYKPP 176
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 146 bits (369), Expect = 4e-35
Identities = 64/92 (69%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + G ++RE++ SPGYYDGRYWTMWKLPMFGCTDA QVL E++E+ K
Sbjct: 92 LLRKGWVPCLEFELEHGTVYREYHRSPGYYDGRYWTMWKLPMFGCTDAVQVLQELDEMIK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCE 258
YPD Y RIIGFDN+RQVQC+SF+A+KP G E
Sbjct: 152 AYPDCYGRIIGFDNVRQVQCISFLAYKPKGAE 183
>RBS5_FRIAG (O22645) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 179
Score = 146 bits (368), Expect = 5e-35
Identities = 64/87 (73%), Positives = 73/87 (83%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LIR+ WVPCLEFS GF+ R++N SPGYYDGRYWTMWKLPMFGCT A QV+ E E KKE
Sbjct: 92 LIRNGWVPCLEFSLEGFVSRDNNKSPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKE 151
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++R+IGFDN+RQVQCVSFI KP
Sbjct: 152 YPAAFIRVIGFDNVRQVQCVSFIVEKP 178
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 180
Score = 145 bits (367), Expect = 6e-35
Identities = 62/88 (70%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+ + WVPCLEF GF++REH +PGYYDGRYWTMWKLPMFGCTD +QV+ E+EE KK
Sbjct: 88 LLNNGWVPCLEFEPTHGFVYREHGNTPGYYDGRYWTMWKLPMFGCTDPSQVVAELEEAKK 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A+ RIIGFDN+RQVQC+SFIA+KP
Sbjct: 148 AYPEAFTRIIGFDNVRQVQCISFIAYKP 175
>RBS_PINTH (P10053) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 171
Score = 144 bits (363), Expect = 2e-34
Identities = 61/87 (70%), Positives = 73/87 (83%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+KWVPCLEF G I R++N SPGYYDGRYW MWKLPMFGCT+A+QV+NEV E K
Sbjct: 84 LLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKA 143
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A++R+IGFDN+RQVQC+SFI KP
Sbjct: 144 YPKAFIRVIGFDNVRQVQCISFIVHKP 170
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3A)
Length = 180
Score = 143 bits (361), Expect = 3e-34
Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + GF++REHN SPGYYDGRYWTMWKLPMFG TDA+QVL E++EV
Sbjct: 90 LLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVA 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A+VRIIGFDN+RQVQC+SFIA P
Sbjct: 150 AYPQAFVRIIGFDNVRQVQCISFIAHTP 177
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3C) (PSS15)
Length = 180
Score = 143 bits (361), Expect = 3e-34
Identities = 64/88 (72%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + GF++REHN SPGYYDGRYWTMWKLPMFG TDA+QVL E++EV
Sbjct: 90 LLRKGWVPCLEFELEKGFVYREHNKSPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVA 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP A+VRIIGFDN+RQVQC+SFIA P
Sbjct: 150 AYPQAFVRIIGFDNVRQVQCISFIAHTP 177
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 183
Score = 143 bits (360), Expect = 4e-34
Identities = 63/96 (65%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
L++ L+ W+PC+EF + F++RE++ SPGY DGRYWTMWKLPM+GCTD QVLNE
Sbjct: 86 LAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNE 145
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEE KK YP A++RIIGFDN RQVQCVSFIA+KP G
Sbjct: 146 VEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKPAG 181
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 142 bits (359), Expect = 5e-34
Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
LI W+PCLEF + F++RE+N SPGYYDGRYW MWKLPMFGCTDATQVL E++E K
Sbjct: 92 LILKGWIPCLEFELEHPFVYRENNRSPGYYDGRYWVMWKLPMFGCTDATQVLAELQEASK 151
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
YP +++RIIGFDN RQVQC+SFIA+KPP
Sbjct: 152 TYPTSHIRIIGFDNKRQVQCISFIAYKPP 180
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 184
Score = 140 bits (354), Expect = 2e-33
Identities = 62/94 (65%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
L++ L+ W+PC+EF + F++RE++ SPGY DGRYWTMWKLPM+GCTD QVLNE
Sbjct: 87 LAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNE 146
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
VEE KK YP A++RIIGFDN RQVQCVSFIA+KP
Sbjct: 147 VEEAKKAYPTAFIRIIGFDNKRQVQCVSFIAYKP 180
>RBS_LARLA (P16031) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 189
Score = 140 bits (354), Expect = 2e-33
Identities = 60/87 (68%), Positives = 73/87 (83%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+++KWVPCLEF + G I R + SPGYYDGRYW MWKLPMFGCT+A+QVLNEV E K
Sbjct: 100 LLKNKWVPCLEFEEDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKA 159
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A++R+IGFDN+RQVQC+SFI KP
Sbjct: 160 YPNAFIRVIGFDNVRQVQCISFIVHKP 186
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 177
Score = 139 bits (350), Expect(2) = 2e-33
Identities = 65/89 (73%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVG--FIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVK 357
L+ WVPCLEF +VG ++RE+N SPGYYDGRYWTMWKLPMFGCTDA+QV EV E K
Sbjct: 89 LLIKGWVPCLEF-EVGPAHVYRENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAEVVECK 147
Query: 356 KEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YPDA+VRIIGFDN RQVQC+SFIA+KP
Sbjct: 148 NAYPDAHVRIIGFDNKRQVQCISFIAYKP 176
Score = 22.7 bits (47), Expect(2) = 2e-33
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LP LS +LLK+++YL
Sbjct: 74 LPTLSEESLLKEINYL 89
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 168
Score = 132 bits (333), Expect(2) = 7e-33
Identities = 58/91 (63%), Positives = 73/91 (80%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+R+ WVPCLEFSK GF++RE++ SP YYDGRYWTMWKLPMFGCTDA+QV E++E
Sbjct: 79 LLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIAS 138
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCE 258
YP+ I+GFDN+RQ Q ++FIA+KP G E
Sbjct: 139 YPELRA-ILGFDNIRQTQWLTFIAYKPAGSE 168
Score = 27.3 bits (59), Expect(2) = 7e-33
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ LLKQVDYL
Sbjct: 64 LPPLTQEQLLKQVDYL 79
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 138 bits (348), Expect = 1e-32
Identities = 60/88 (68%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPC+EF + GF+ R++N+SPGYYDGRYWTMW+LP+FG TDA QVL EV E K
Sbjct: 88 LLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLKEVAECKA 147
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
EYP+A++RIIGFDN+RQVQC+SFIA P
Sbjct: 148 EYPEAFIRIIGFDNVRQVQCISFIASTP 175
>RBS_SINAL (P13951) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit) (Fragment)
Length = 82
Score = 137 bits (346), Expect = 2e-32
Identities = 56/73 (76%), Positives = 68/73 (93%)
Frame = -3
Query: 485 GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMR 306
GF++REH ++PGYYDGRYWTMWKLP+FGCTD+ QVL EV+E KKEYP+A++RIIGFDN R
Sbjct: 5 GFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNR 64
Query: 305 QVQCVSFIAFKPP 267
QVQC+SFIA+KPP
Sbjct: 65 QVQCISFIAYKPP 77
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 137 bits (346), Expect = 2e-32
Identities = 58/88 (65%), Positives = 75/88 (85%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
LIR W+PCLEF + GF++RE++ SPGYYDGRYWTMW+LP+FG TD++QVL E+ + K
Sbjct: 90 LIRKGWIPCLEFELEKGFVYRENHRSPGYYDGRYWTMWRLPLFGATDSSQVLKELADCKA 149
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
EYPD+++RIIGFDN+RQVQC+SFIA P
Sbjct: 150 EYPDSFIRIIGFDNVRQVQCISFIAHTP 177
>RBS1_SPIOL (P00870) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 123
Score = 137 bits (345), Expect = 2e-32
Identities = 63/96 (65%), Positives = 76/96 (79%), Gaps = 1/96 (1%)
Frame = -3
Query: 548 LSRSTTLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
L+ L+ W+P LEF K GF++REH+ SPGYYDGRYWTMWKLPMFG TD QV+NE
Sbjct: 27 LAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNE 86
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
VEEVKK PDA+VR IGF++ R+VQC+SFIA+KP G
Sbjct: 87 VEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1)
(Fragment)
Length = 136
Score = 134 bits (336), Expect = 2e-31
Identities = 59/88 (67%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKV-GFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKK 354
L+R WVPCLEF + GF++ EHN SP YYDGRYWTMWKLPMFG TD QV+ EV+EV
Sbjct: 46 LLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVA 105
Query: 353 EYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+A+VR+IGF+N+RQVQC+SFIA P
Sbjct: 106 AYPEAFVRVIGFNNVRQVQCISFIAHTP 133
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 123 bits (308), Expect(2) = 7e-30
Identities = 54/88 (61%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
+I+S W PC+EF G + RE + PGYYDGRYWTMWKLPMFGCTD+ VL E+EE KK
Sbjct: 91 VIKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKL 150
Query: 350 Y-PDAYVRIIGFDNMRQVQCVSFIAFKP 270
Y Y+R +GFDN RQVQC SFI +P
Sbjct: 151 YGKKCYIRCLGFDNTRQVQCASFIVHQP 178
Score = 26.9 bits (58), Expect(2) = 7e-30
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS AL KQ+DY+
Sbjct: 76 LPPLSQDALAKQIDYV 91
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 168
Score = 107 bits (267), Expect(2) = 1e-23
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
+I + W PCLEF+ F R S GYYD RYWTMWKLPMFGCTD +QVL E
Sbjct: 61 IINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQVLRE 120
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
V + +P+ Y+R++ FDN++QVQC+ F+ +P E
Sbjct: 121 VSACQVAFPNVYIRLVAFDNVKQVQCMGFLVQRPRNAAE 159
Score = 21.9 bits (45), Expect(2) = 1e-23
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + +QVDY+
Sbjct: 46 LPPLTNQKIGRQVDYI 61
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunits)
[Contains: Ribulose bisphosphate carboxylase small chain
P1; Ribulose bisphosphate carboxylase small chain P2;
Ribulose bispho
Length = 1273
Score = 103 bits (258), Expect(2) = 9e-23
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 1036 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 1095
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 1096 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 1128
Score = 103 bits (258), Expect(2) = 9e-23
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 748 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 807
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 808 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 840
Score = 103 bits (258), Expect(2) = 9e-23
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 605 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 664
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 665 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 697
Score = 103 bits (258), Expect(2) = 9e-23
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 318 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 377
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 378 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 410
Score = 103 bits (258), Expect(2) = 9e-23
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 234 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 266
Score = 102 bits (253), Expect(2) = 3e-22
Identities = 46/93 (49%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD YWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 461 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRA 520
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR+ FD+++QVQ +SF+ +P G S
Sbjct: 521 YPQCYVRLAAFDSVKQVQVISFVVQRPSGSSSS 553
Score = 100 bits (250), Expect(2) = 7e-22
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 7/87 (8%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 1180 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 1239
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP YVR+ FD+++QVQ +SF+ +P
Sbjct: 1240 YPQCYVRLAAFDSVKQVQVISFVVQRP 1266
Score = 99.8 bits (247), Expect(2) = 2e-21
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 7/93 (7%)
Frame = -3
Query: 509 PCLEFS--KVGFIFREHNA-----SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
PCLEF+ + FI ++ + GYYD RYWTMWKLPMFGCTDA+QVL E+ E ++
Sbjct: 893 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 952
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEES 252
YP YVR + FD+++QVQ +SF+ +P G S
Sbjct: 953 YPQCYVR-LAFDSVKQVQVISFVVQRPSGSSSS 984
Score = 22.3 bits (46), Expect(2) = 7e-22
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 1158 LPPLSDAQIAKQVDMI 1173
Score = 22.3 bits (46), Expect(2) = 9e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 1014 LPPLSDAQIAKQVDMI 1029
Score = 22.3 bits (46), Expect(2) = 2e-21
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 871 LPPLSDAQIAKQVDMI 886
Score = 22.3 bits (46), Expect(2) = 9e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 726 LPPLSDAQIAKQVDMI 741
Score = 22.3 bits (46), Expect(2) = 9e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 583 LPPLSDAQIAKQVDMI 598
Score = 22.3 bits (46), Expect(2) = 3e-22
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 439 LPPLSDAQIAKQVDMI 454
Score = 22.3 bits (46), Expect(2) = 9e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 296 LPPLSDAQIAKQVDMI 311
Score = 22.3 bits (46), Expect(2) = 9e-23
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + KQVD +
Sbjct: 152 LPPLSDAQIAKQVDMI 167
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 183
Score = 98.6 bits (244), Expect(2) = 2e-21
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF+ + R S Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 76 ILANSWTPCLEFAASDQAYAGNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSE 135
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 136 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 174
Score = 23.5 bits (49), Expect(2) = 2e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 61 LPPLTDEQISKQVDYI 76
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 182
Score = 98.6 bits (244), Expect(2) = 2e-21
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTDA+QVL+E
Sbjct: 75 ILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDASQVLSE 134
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 135 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 173
Score = 23.5 bits (49), Expect(2) = 2e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 60 LPPLTDEQISKQVDYI 75
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6) (rbcS4)
Length = 182
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ + G Y D RYWTMWKLPMFGCTD +QVL E
Sbjct: 75 ILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLTE 134
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 135 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 173
Score = 23.5 bits (49), Expect(2) = 3e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 60 LPPLTDEQISKQVDYI 75
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 182
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 75 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 134
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 135 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 173
Score = 23.5 bits (49), Expect(2) = 3e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 60 LPPLTDEQISKQVDYI 75
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 182
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 75 ILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 134
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 135 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 173
Score = 23.5 bits (49), Expect(2) = 3e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 60 LPPLTDEQISKQVDYI 75
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2) (Fragment)
Length = 173
Score = 97.8 bits (242), Expect(2) = 3e-21
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 66 ILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 125
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 126 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 164
Score = 23.5 bits (49), Expect(2) = 3e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 51 LPPLTDEQISKQVDYI 66
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 184
Score = 97.4 bits (241), Expect(2) = 4e-21
Identities = 45/95 (47%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 77 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 136
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPP 267
++ K +PDAY+R++ FD RQVQ F+ +PP
Sbjct: 137 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPP 171
Score = 23.5 bits (49), Expect(2) = 4e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 62 LPPLTDEQISKQVDYI 77
>RBS1_ACECL (P16129) Ribulose bisphosphate carboxylase small chain 1 (EC|
4.1.1.39) (RuBisCO small subunit 1) (Fragment)
Length = 126
Score = 97.4 bits (241), Expect(2) = 4e-21
Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHN-------ASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF+ + ++ + Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 19 ILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 78
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 79 IQACTKAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 117
Score = 23.5 bits (49), Expect(2) = 4e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 4 LPPLTDEQISKQVDYI 19
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 185
Score = 99.4 bits (246), Expect = 7e-21
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W+PCLEF++ + R + S YYD RYWTMWKLPMFGC D QVL E
Sbjct: 78 IVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLRE 137
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
+ K +PDAYVR++ FDN +QVQ + F+ +P
Sbjct: 138 IVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRP 171
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 7) (rbcS1)
Length = 183
Score = 96.3 bits (238), Expect(2) = 8e-21
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL++
Sbjct: 76 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSD 135
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ K +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 136 MQACTKAFPDAYIRLVCFDANRQVQICGFLVHRPPSATD 174
Score = 23.5 bits (49), Expect(2) = 8e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 61 LPPLTDEQISKQVDYI 76
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 175
Score = 95.9 bits (237), Expect(2) = 8e-21
Identities = 43/94 (45%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++R+ W PCLEF S ++ ++ G Y D RYWTMWKLPMFGC D +QVL E
Sbjct: 68 ILRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTE 127
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
+ K +PDAY+R++ FD RQVQ F+ +P
Sbjct: 128 ISACTKAFPDAYIRLVCFDANRQVQISGFLVHRP 161
Score = 23.9 bits (50), Expect(2) = 8e-21
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 53 LPPLTDDQITKQVDYI 68
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 185
Score = 99.0 bits (245), Expect = 9e-21
Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W+PCLEF++ + R + S YYD RYWTMWKLPMFGC D QVL E
Sbjct: 78 IVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLRE 137
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
+ K +PDAYVR++ FDN +QVQ + F+ +P +
Sbjct: 138 IVACTKAFPDAYVRLVAFDNQKQVQIMGFLVQRPKSARD 176
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 183
Score = 95.9 bits (237), Expect(2) = 1e-20
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 76 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 135
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 136 IQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 174
Score = 23.5 bits (49), Expect(2) = 1e-20
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 61 LPPLTDEQISKQVDYI 76
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 182
Score = 95.9 bits (237), Expect(2) = 1e-20
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
Frame = -3
Query: 530 LIRSKWVPCLEF--SKVGFIFREHNASPG-----YYDGRYWTMWKLPMFGCTDATQVLNE 372
++ + W PCLEF S + E+ G Y D RYWTMWKLPMFGCTD +QVL+E
Sbjct: 75 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSE 134
Query: 371 VEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEE 255
++ +PDAY+R++ FD RQVQ F+ +PP +
Sbjct: 135 IQACTNAFPDAYIRLVCFDANRQVQISGFLVHRPPSATD 173
Score = 23.5 bits (49), Expect(2) = 1e-20
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPL+ + KQVDY+
Sbjct: 60 LPPLTDEQISKQVDYI 75
>RBS2_ACECL (P16130) Ribulose bisphosphate carboxylase small chain 2 (EC|
4.1.1.39) (RuBisCO small subunit 2) (Fragment)
Length = 86
Score = 89.7 bits (221), Expect = 5e-18
Identities = 37/68 (54%), Positives = 48/68 (70%)
Frame = -3
Query: 458 SPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIA 279
S Y D RYWTMWKLPMFGCTD +QVL+E++ K +PDAY+R++ FD RQVQ F+
Sbjct: 10 SSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQVQISGFLV 69
Query: 278 FKPPGCEE 255
+PP +
Sbjct: 70 HRPPSATD 77
>RBS_PROHO (P27569) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 109
Score = 80.9 bits (198), Expect = 2e-15
Identities = 37/87 (42%), Positives = 56/87 (64%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
++R ++P +EF++ + +A+ Y WTMWKLP+F T +VL EV E + E
Sbjct: 31 MVREGYIPAVEFNE------DSDATTCY-----WTMWKLPLFHATSTQEVLGEVRECRTE 79
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP+ Y+R++GFDN++Q Q VSFI KP
Sbjct: 80 YPNCYIRVVGFDNIKQCQSVSFIVHKP 106
>RBS_SYNP2 (Q44178) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 111
Score = 80.5 bits (197), Expect = 3e-15
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = -3
Query: 515 WVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAY 336
++P +EF K + +P + +WT+WKLP+F + A +VLNEV E + EY D Y
Sbjct: 36 YIPGIEFEK--------DPTPELH---HWTLWKLPLFNASSAQEVLNEVRECRSEYSDCY 84
Query: 335 VRIIGFDNMRQVQCVSFIAFKP 270
+R++GFDN++Q Q VSFI +KP
Sbjct: 85 IRVVGFDNIKQCQTVSFIVYKP 106
>RBS_SYNP6 (P04716) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 110
Score = 79.0 bits (193), Expect(2) = 7e-15
Identities = 35/69 (50%), Positives = 45/69 (65%)
Frame = -3
Query: 476 FREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ 297
F EH+ +Y WTMWKLP+F C QVL+EV E + EY D Y+R+ GFDN++Q Q
Sbjct: 43 FNEHSNPEEFY----WTMWKLPLFDCKSPQQVLDEVRECRSEYGDCYIRVAGFDNIKQCQ 98
Query: 296 CVSFIAFKP 270
VSFI +P
Sbjct: 99 TVSFIVHRP 107
Score = 20.8 bits (42), Expect(2) = 7e-15
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 576 LPPLSTXALLKQVDYL 529
LPPLS + Q++Y+
Sbjct: 17 LPPLSDRQIAAQIEYM 32
>RBS_SYNY3 (P54206) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 113
Score = 75.5 bits (184), Expect = 1e-13
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+ ++P +EF E + P + +WTMWKLP FG A +VL EV E + E
Sbjct: 31 LLDQGFIPGVEF--------EEDPQP---ETHFWTMWKLPFFGGATANEVLAEVRECRSE 79
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
P+ Y+R+IGFDN++Q Q VSFI KP
Sbjct: 80 NPNCYIRVIGFDNIKQCQTVSFIVHKP 106
>RBS_ANASP (P06514) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 109
Score = 73.9 bits (180), Expect = 3e-13
Identities = 33/87 (37%), Positives = 54/87 (62%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
++ ++P +EF++V + P YWT+WKLP+FG + +VL EV+ + +
Sbjct: 31 ILSQGYIPAVEFNEV--------SEPTEL---YWTLWKLPLFGAKTSREVLAEVQSCRSQ 79
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YP Y+R++GFDN++Q Q +SFI KP
Sbjct: 80 YPGHYIRVVGFDNIKQCQILSFIVHKP 106
>RBS_CYAPA (P18062) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 106
Score = 71.6 bits (174), Expect = 1e-12
Identities = 25/54 (46%), Positives = 43/54 (79%)
Frame = -3
Query: 431 WTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
WT+WKLP+FG +VL+E++ K+++P+AY+R++ FD++RQVQ + F+ +KP
Sbjct: 52 WTLWKLPLFGAQSPEEVLSEIQACKQQFPNAYIRVVAFDSIRQVQTLMFLVYKP 105
>RBS_PSEHY (Q51857) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 124
Score = 64.7 bits (156), Expect = 2e-10
Identities = 24/55 (43%), Positives = 39/55 (70%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YW MWKLPMFG TD +++ E+E K+ P+ +++IG+DN+RQ Q + + ++P
Sbjct: 68 YWYMWKLPMFGETDVDKIIAEIEACKRSNPNHLIKLIGYDNIRQTQGTAMLVYRP 122
>RBS2_HYDMR (Q59461) Ribulose bisphosphate carboxylase small chain 2 (EC|
4.1.1.39) (RuBisCO small subunit 2)
Length = 122
Score = 64.7 bits (156), Expect = 2e-10
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
+I W P LE + +P YW MWKLPMFG D VL E+++ +
Sbjct: 35 IINQGWTPALE-----------HEAPEAASSHYWGMWKLPMFGTRDPNAVLAEIDQCRAA 83
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFKPPG-CEESG 249
YP+ +R+IG+DN Q Q +F F G C G
Sbjct: 84 YPNHMIRLIGYDNYTQCQGHNFCRFTVLGECNSHG 118
>RBS2_THIFE (Q07088) Ribulose bisphosphate carboxylase small chain 2 (EC|
4.1.1.39) (RuBisCO small subunit 2)
Length = 118
Score = 64.7 bits (156), Expect = 2e-10
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = -3
Query: 440 GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFK 273
G YW MWKLPMFG TD +L E E K P +VRI+G+DN +Q Q S + ++
Sbjct: 59 GNYWYMWKLPMFGETDVDTILKEAERCHKRNPHNHVRIVGYDNFKQSQGTSLVVYR 114
>RBS_ALVHS (P24682) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 121
Score = 64.3 bits (155), Expect = 2e-10
Identities = 30/68 (44%), Positives = 39/68 (57%)
Frame = -3
Query: 470 EHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV 291
EH +D YW MWKLPMFG TD +L E E K +P +VR+IG+DN Q Q
Sbjct: 50 EHTEPENAFD-HYWYMWKLPMFGETDVDAILAEAEACHKAHPSHHVRLIGYDNYAQSQGT 108
Query: 290 SFIAFKPP 267
+ + F+ P
Sbjct: 109 AMVIFRGP 116
>RBS2_CHRVI (P22860) Ribulose bisphosphate carboxylase small chain 2 (EC|
4.1.1.39) (RuBisCO small subunit 2)
Length = 113
Score = 62.0 bits (149), Expect = 1e-09
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 270
YW MWK+P FG D +L E+E ++ YPD +VR++G+D Q + SF+A +P
Sbjct: 58 YWPMWKMPFFGEQDPNVILTEIESCRRSYPDHHVRLVGYDTYAQSKGHSFLAHRP 112
>RBS1_CHRVI (P22850) Ribulose bisphosphate carboxylase small chain 1 (EC|
4.1.1.39) (RuBisCO small subunit 1)
Length = 117
Score = 61.6 bits (148), Expect = 2e-09
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = -3
Query: 470 EHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV 291
EH +D YW MWKLPMFG TD +L E E K +P+ +VR+IGFDN Q +
Sbjct: 49 EHTEPENAFD-HYWYMWKLPMFGETDIDTILKEAEACHKAHPNNHVRLIGFDNYAQSKGA 107
Query: 290 SFIAFK 273
+ ++
Sbjct: 108 EMVVYR 113
>RBS_THIDA (Q56260) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 118
Score = 61.6 bits (148), Expect = 2e-09
Identities = 29/86 (33%), Positives = 45/86 (52%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
L+ W P +E ++ P + YW MWKLPMFG TD ++L E E K
Sbjct: 40 LVSKGWNPAIEHTE-----------PEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKA 88
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFK 273
P+ +VR++G+DN Q Q + + ++
Sbjct: 89 NPNNHVRLVGYDNFAQSQGAAMVIYR 114
>RBS1_HYDMR (Q59459) Ribulose bisphosphate carboxylase small chain 1 (EC|
4.1.1.39) (RuBisCO small subunit 1)
Length = 117
Score = 59.3 bits (142), Expect = 8e-09
Identities = 33/78 (42%), Positives = 41/78 (52%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
+I W P +E S+ F YW MWKLPMFG TDA VL EV+ K
Sbjct: 40 IISKGWNPAIEHSEPENAF-----------SYYWYMWKLPMFGDTDANVVLAEVDACIKA 88
Query: 350 YPDAYVRIIGFDNMRQVQ 297
P+ +VR+IG+DN Q Q
Sbjct: 89 NPNNHVRLIGYDNYAQSQ 106
>RBS_SYNPX (P0A4S5) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 113
Score = 57.8 bits (138), Expect = 2e-08
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
+I W P +E + P YW+ WKLP FG D V++E+E +
Sbjct: 37 IIAQGWSPLVE-----------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRA 85
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFK 273
YPD +VRI+G+D Q Q F+ F+
Sbjct: 86 YPDHHVRIVGYDAYTQSQGACFVVFE 111
>RBS_SYNPW (P0A4S6) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 113
Score = 57.8 bits (138), Expect = 2e-08
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
+I W P +E + P YW+ WKLP FG D V++E+E +
Sbjct: 37 IIAQGWSPLVE-----------HVHPSNSMATYWSYWKLPFFGEKDLNVVVSELEACHRA 85
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFK 273
YPD +VRI+G+D Q Q F+ F+
Sbjct: 86 YPDHHVRIVGYDAYTQSQGACFVVFE 111
>RBS_RHOCA (O32741) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 118
Score = 57.4 bits (137), Expect = 3e-08
Identities = 28/86 (32%), Positives = 46/86 (53%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
++++ W P +E ++ P + YW MWKLPMFG TD +L E++ +
Sbjct: 40 IVKNGWNPGIEHTE-----------PDFAAQIYWYMWKLPMFGETDVDAILAELKACHEA 88
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFK 273
P +VR+IG+DN Q Q + I ++
Sbjct: 89 NPGHHVRLIGYDNFTQSQGANMIVYR 114
>RBS_NITVU (Q59614) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 108
Score = 57.0 bits (136), Expect = 4e-08
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = -3
Query: 470 EHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV 291
EH YW MWKLP+FG V+ E+E +E+PD VR + +DN Q Q +
Sbjct: 43 EHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGM 102
Query: 290 SFIAFK 273
+F+ ++
Sbjct: 103 AFVVYR 108
>RBS1_THIFE (P28896) Ribulose bisphosphate carboxylase small chain 1 (EC|
4.1.1.39) (RuBisCO small subunit 1)
Length = 110
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/86 (33%), Positives = 42/86 (48%)
Frame = -3
Query: 530 LIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
LI W P +E + P YW MWKLPMFG V+ E+E +
Sbjct: 34 LINQGWNPGIE-----------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRA 82
Query: 350 YPDAYVRIIGFDNMRQVQCVSFIAFK 273
+P +VR++G+DN Q Q +F+ F+
Sbjct: 83 HPGHHVRLVGYDNYSQSQGSAFVVFR 108
>RBS_GUITH (P14960) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 54.7 bits (130), Expect = 2e-07
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKPPGC 261
YW +W LP+FG D V+ E+ +K P YV++ FDN R V+ C+SFI +P
Sbjct: 47 YWDLWGLPLFGIKDPAAVMFEINACRKAKPACYVKVNAFDNSRGVESCCLSFIVQRPTSN 106
Query: 260 E 258
E
Sbjct: 107 E 107
>RBS_BRAJA (Q9ZI33) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 134
Score = 53.9 bits (128), Expect = 3e-07
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKPP 267
YW MW LPMF DA V+ E+ E ++ Y D Y+RI GFD+ + V SF+ +PP
Sbjct: 47 YWEMWGLPMFDLQDAAGVMMELAECRRVYGDRYIRISGFDSSPGWESVRISFLVNRPP 104
>RBS2_RHIME (P56890) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 129
Score = 52.4 bits (124), Expect = 9e-07
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKP 270
YW MW PMF DA V+ EVE+ +K +P Y+R+ FD+ R ++ V SFI +P
Sbjct: 47 YWEMWGNPMFDLRDAKGVMMEVEDCRKAHPQDYIRLNAFDSSRGLETVTMSFIVNRP 103
>RBS_CYAME (O22024) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 52.0 bits (123), Expect = 1e-06
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKP 270
YW MW LP+F D ++ EV+E +K++P+ Y++++ F++ + ++ +SFI +P
Sbjct: 47 YWEMWGLPLFDVKDPATIMFEVQECRKQFPNHYIKVLAFNSTKGIESTALSFIVNRP 103
>RBS_THINE (P45686) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 110
Score = 51.6 bits (122), Expect = 2e-06
Identities = 20/55 (36%), Positives = 33/55 (60%)
Frame = -3
Query: 437 RYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFK 273
+YW MWKLP FG + VL E+E + YP V+++ +DN Q ++F+ ++
Sbjct: 54 QYWYMWKLPFFGEQNVDNVLAEIEACRSAYPTHQVKLVAYDNYAQSLGLAFVVYR 108
>RBS1_RHOSH (P27998) Ribulose bisphosphate carboxylase small chain 1 (EC|
4.1.1.39) (RuBisCO small subunit 1)
Length = 129
Score = 51.6 bits (122), Expect = 2e-06
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -3
Query: 470 EHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV 291
EH P + YW MW +PMF D V+ E++E +K +P Y+RI FD+ R + V
Sbjct: 36 EHTDDP-HPRNTYWEMWGMPMFDLRDPKGVMIELDECRKAWPGRYIRINAFDSTRGFETV 94
Query: 290 --SFIAFKP 270
SFI +P
Sbjct: 95 TMSFIVNRP 103
>RBS_ANTSP (P25458) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ-CV-SFIAFKP--- 270
YW +W LP+F D V+ E+E +K++ Y++I FDN R V+ CV SFI +P
Sbjct: 47 YWELWGLPLFDINDVESVMYELESCRKQHSGLYIKINAFDNTRGVESCVLSFIINRPSYE 106
Query: 269 PGCE 258
PG E
Sbjct: 107 PGFE 110
>RBS1_RHIME (P58349) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 129
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKP 270
YW MW PMF DA V+ E+E+ +K +P Y+R+ FD+ R ++ V SFI +P
Sbjct: 47 YWEMWGNPMFDLKDAKGVMMELEDCRKAHPQDYIRLNAFDSSRGLETVTMSFIVNRP 103
>RBS_PORAE (Q09125) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 50.8 bits (120), Expect = 3e-06
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKP 270
+W +W LP+F DA+ ++ E+ +K P+ Y+++ FDN R V+ C+SFI +P
Sbjct: 47 FWELWGLPLFDVKDASALMYEIAACRKAKPNYYIKVNAFDNTRGVESCCLSFIINRP 103
>RBS_XANFL (P23012) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 133
Score = 50.4 bits (119), Expect = 4e-06
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKP 270
YW MW LPMF DA V EVE + +P YVR+ FD+ R + V SFI +P
Sbjct: 47 YWEMWGLPMFDLRDAAGVYGEVEACRTAHPGKYVRVNAFDSNRGWETVRLSFIVQRP 103
>RBS_PLECA (Q08052) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 48.9 bits (115), Expect = 1e-05
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ-CV-SFIAFKP 270
YW MW LP+F D +L E+ +K P+ Y++I FDN R ++ CV SFI +P
Sbjct: 47 YWEMWGLPLFDVKDPAAILFEINMARKAKPNYYLKIACFDNTRGIESCVLSFIVQRP 103
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal|
(EC 4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 48.9 bits (115), Expect = 1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKP 270
YW M+ LPMF DA +L E+ + +P+ Y+R+ FD+ V+ V SFI +P
Sbjct: 47 YWEMFGLPMFDLRDAAGILMEINNARNTFPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
>RBS_PORPU (P51227) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKP 270
YW +W LP+F D V+ E+ +K P YV++ FDN R V+ +SFI +P
Sbjct: 47 YWELWGLPLFDVKDPAAVMYEINSCRKAKPSYYVKVNAFDNTRGVESCSMSFIVNRP 103
>RBSP_RALEU (Q59102) Ribulose bisphosphate carboxylase small chain, plasmid (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 48.5 bits (114), Expect = 1e-05
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCV--SFIAFKP 270
YW M+ LPMF DA +L E+ + +P+ Y+R+ FD+ V+ V SFI +P
Sbjct: 47 YWEMFGLPMFDLRDAAGILLEINNARSTFPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
>RBS_CYACA (P37394) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 47.8 bits (112), Expect = 2e-05
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKP 270
YW MW LP+F D ++ EVE +KE + Y++++ FD+ + V+ +SF+ +P
Sbjct: 47 YWEMWGLPLFDVKDPAAIMFEVEACRKEKSNYYIKLLAFDSTKGVESTAMSFMVNRP 103
>RBS_GALSU (P23756) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 138
Score = 47.4 bits (111), Expect = 3e-05
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ--CVSFIAFKP 270
+W MW LP+F TD VL E+ +K + Y++++GF + R ++ +SFI +P
Sbjct: 47 FWEMWGLPLFEVTDPAPVLFEINACRKAKSNFYIKVVGFSSERGIESTIISFIVNRP 103
>RBS_OLILU (P14961) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 45.1 bits (105), Expect(2) = 5e-05
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMR--QVQCVSFIAFKP 270
YW +W LP+F D++ +L EV E ++ P+ Y++++ F+ R + +FI +P
Sbjct: 47 YWELWGLPLFDVKDSSAILYEVNECRRLNPEGYIKLVAFNAARGTESSASAFIVQRP 103
Score = 21.2 bits (43), Expect(2) = 5e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 576 LPPLSTXALLKQVDY 532
LP L+ ++KQ+DY
Sbjct: 11 LPDLTDAQIIKQIDY 25
>RBS_PYLLI (P23652) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 44.7 bits (104), Expect = 2e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFD-NMRQVQCV-SFIAFKP 270
YW +W LP+F D V+ E+ E +K P+ Y++I FD ++ CV SFI +P
Sbjct: 47 YWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRP 103
>RBS_ECTSI (P24395) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 44.7 bits (104), Expect = 2e-04
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFD-NMRQVQCV-SFIAFKP 270
YW +W LP+F D V+ E+ E +K P+ Y++I FD ++ CV SFI +P
Sbjct: 47 YWELWGLPLFDVKDPAAVMYELAECRKVNPEGYIKINAFDASIGTESCVMSFIVQRP 103
>RBS_THANO (O98948) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 43.9 bits (102), Expect = 3e-04
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQ-CV-SFIAFKP 270
YW +W LP+F D V+ E+ E +K Y+RI FD V+ CV SFI +P
Sbjct: 47 YWELWGLPLFDIKDPATVMFELNEARKSCASGYIRINAFDASYGVESCVMSFITNRP 103
>RBS_ODOSI (P49521) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 42.4 bits (98), Expect = 0.001
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFD-NMRQVQCV-SFIAFKP 270
YW +W LP+F D V+ E+ E +K + Y+R+ FD + CV SFI +P
Sbjct: 47 YWELWGLPLFDIKDIASVMFELSEARKSCANGYIRMNAFDASYGTESCVMSFIVSRP 103
>RBS_CYLSN (P24683) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFD-NMRQVQCV-SFIAFKP 270
YW +W LP+F D V+ E++E +K Y+R+ FD + CV SFI +P
Sbjct: 47 YWELWGLPLFDIKDPASVMFELQEARKACAAGYIRMNAFDASYGTESCVMSFIVNRP 103
>RBS_DETCO (O98946) Ribulose bisphosphate carboxylase small chain (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 434 YWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFD-NMRQVQCV-SFIAFKP 270
YW +W LP+F D V+ E+ E +K Y+R+ FD + CV SFI +P
Sbjct: 47 YWELWGLPLFDIKDPATVMFELNEARKSCAAGYIRMNAFDASYGTESCVMSFITNRP 103
>MURB_STAHJ (Q4L4G3) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
Length = 307
Score = 32.7 bits (73), Expect = 0.76
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 122 AHVHVPTWLEKACSYVNAIGGYVY----AHAHNIIQSVDYVICI 3
A HV T LE AC ++GG VY A+ I +DY +C+
Sbjct: 115 ARDHVLTGLEFACGIPGSVGGAVYMNAGAYGGEIKDCIDYALCV 158
>MURB_STAES (Q8CPZ7) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
Length = 306
Score = 31.2 bits (69), Expect = 2.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 122 AHVHVPTWLEKACSYVNAIGGYVY----AHAHNIIQSVDYVICI 3
A HV T LE AC +IGG V+ A+ + +DY +C+
Sbjct: 114 ARDHVLTGLEFACGIPGSIGGAVFMNAGAYGGEVKDCIDYALCV 157
>MURB_STAEQ (Q5HQZ1) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
Length = 306
Score = 31.2 bits (69), Expect = 2.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = -3
Query: 122 AHVHVPTWLEKACSYVNAIGGYVY----AHAHNIIQSVDYVICI 3
A HV T LE AC +IGG V+ A+ + +DY +C+
Sbjct: 114 ARDHVLTGLEFACGIPGSIGGAVFMNAGAYGGEVKDCIDYALCV 157
>NFIP1_RAT (Q5U2S1) NEDD4 family-interacting protein 1|
Length = 221
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_MOUSE (Q8R0W6) NEDD4 family-interacting protein 1 (NEDD4 WW|
domain-binding protein 5)
Length = 221
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_HUMAN (Q9BT67) NEDD4 family-interacting protein 1 (NEDD4 WW|
domain-binding protein 5) (Putative MAPK-activating
protein PM13) (Putative NF-kappa-B-activating protein
164) (Putative NFKB and MAPK-activating protein) (Breast
cancer-associated protein
Length = 221
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 159 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 188
>NFIP1_BRARE (Q6DGP4) NEDD4 family-interacting protein 1|
Length = 210
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 148 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 177
>CCMM_SYNP7 (Q03513) Carbon dioxide concentrating mechanism protein ccmM|
Length = 539
Score = 30.4 bits (67), Expect = 3.8
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 398 TDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPG 264
T+ QVL+E+E E+ YVR++G D + + + +P G
Sbjct: 267 TNERQVLSELENCLSEHEGEYVRLLGIDTNTRSRVFEALIQRPDG 311
Score = 29.3 bits (64), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 386 QVLNEVEEVKKEYPDAYVRIIGFDNMRQVQCVSFIAFKPPGCEESGKA 243
QVL E+E E+ YVR++G D + + + P G S KA
Sbjct: 387 QVLAELENCLSEHEGEYVRLLGIDTASRSRVFEALIQDPQGPVGSAKA 434
>NFIP1_XENTR (Q4V786) NEDD4 family-interacting protein 1|
Length = 211
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 149 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 178
>NFIP1_XENLA (Q6GLN5) NEDD4 family-interacting protein 1|
Length = 212
Score = 30.4 bits (67), Expect = 3.8
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 518 KWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFG 402
KW+ + FS PGY+DG+YW W + G
Sbjct: 150 KWILIVRFSTY---------FPGYFDGQYWLWWVFLVLG 179
>US27_HCMVA (P09703) G-protein coupled receptor homolog US27 (HHRF2)|
Length = 362
Score = 30.0 bits (66), Expect = 4.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 21 DRLYNIMCMCIYIATDSIHIRACFLEPCWYMNMGIHTFLGTNKK 152
D L N++ C+Y+ ++RAC +N GI+ +GT +
Sbjct: 266 DTLQNVIIFCLYVGQFLAYVRAC-------LNPGIYILVGTQMR 302
>PCS_SCHPO (Q10075) Glutathione gamma-glutamylcysteinyltransferase (EC|
2.3.2.15) (Phytochelatin synthase)
Length = 414
Score = 29.3 bits (64), Expect = 8.4
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 506 CLEFSKVGFIFREH-NASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKE 351
C+ +K +F +H N + Y +W ++ LPM VL E++ + KE
Sbjct: 323 CIRSTKTYHLFLKHTNTNVEYITMAFWAIFSLPMIQKALPKGVLEEIQSLLKE 375
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,646,994
Number of Sequences: 219361
Number of extensions: 1543846
Number of successful extensions: 4279
Number of sequences better than 10.0: 161
Number of HSP's better than 10.0 without gapping: 3972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4196
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4872342800
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)