Clone Name
rbasd20o11
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate c...
942
0.0
2 emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical pr...
886
0.0
3 emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precur...
842
0.0
4 emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosp...
743
0.0
5 dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
581
e-162
6 emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precur...
573
e-160
7 dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
557
e-155
8 gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisp...
446
e-122
9 emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical pr...
438
e-120
10 gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo...
438
e-120
11 gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carbo...
434
e-118
12 dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
428
e-117
13 dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphospha...
426
e-116
14 dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisph...
426
e-116
15 dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphat...
426
e-116
16 dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosp...
426
e-116
17 dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
426
e-116
18 dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
424
e-115
19 emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putat...
422
e-115
20 dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for r...
418
e-114
21 dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp...
418
e-114
22 dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bispho...
418
e-114
23 dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate...
410
e-111
24 dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphat...
410
e-111
25 dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bispho...
410
e-111
26 dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
410
e-111
27 dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphospha...
410
e-111
28 dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph...
410
e-111
29 dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
410
e-111
30 dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
404
e-109
31 dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
402
e-109
32 dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
402
e-109
33 dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
402
e-109
34 dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
402
e-109
35 dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
402
e-109
36 dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bis...
402
e-109
37 dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
394
e-106
38 dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosp...
394
e-106
39 dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
394
e-106
40 dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
394
e-106
41 dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphos...
394
e-106
42 dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
394
e-106
43 dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosph...
387
e-104
44 dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
387
e-104
45 dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for rib...
387
e-104
46 dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for r...
387
e-104
47 dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosph...
373
e-100
48 dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for rib...
373
e-100
49 gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisph...
371
2e-99
50 dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate...
371
2e-99
51 dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphos...
367
3e-98
52 gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bi...
365
1e-97
53 gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphat...
363
4e-97
54 gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphospha...
363
4e-97
55 gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisp...
359
7e-96
56 gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate...
355
1e-94
57 gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulos...
355
1e-94
58 gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate...
351
2e-93
59 gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisp...
347
3e-92
60 gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bi...
347
3e-92
61 gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulos...
347
3e-92
62 gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphat...
347
3e-92
63 dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate c...
347
3e-92
64 gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphat...
343
4e-91
65 gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bi...
339
6e-90
66 gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bi...
339
6e-90
67 gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate ca...
339
6e-90
68 gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate ca...
331
1e-87
69 gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate ...
331
1e-87
70 gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisph...
315
9e-83
71 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
232
1e-57
72 dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clon...
232
1e-57
73 dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clon...
232
1e-57
74 dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clon...
232
1e-57
75 dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clon...
232
1e-57
76 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
232
1e-57
77 emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa...
232
1e-57
78 dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mR...
232
1e-57
79 gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1...
224
2e-55
80 dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clon...
224
2e-55
81 emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523...
224
2e-55
82 gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisp...
224
2e-55
83 dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clon...
210
4e-51
84 gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate ca...
210
4e-51
85 gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate ca...
208
1e-50
86 dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mR...
208
1e-50
87 emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate...
174
2e-40
88 gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate ca...
170
3e-39
89 gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate ...
139
1e-29
90 emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxy...
137
5e-29
91 emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subuni...
137
5e-29
92 emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small sub...
131
3e-27
93 emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small sub...
131
3e-27
94 emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subu...
131
3e-27
95 emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subu...
131
3e-27
96 emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ri...
123
7e-25
97 gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxyl...
121
3e-24
98 emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subu...
115
2e-22
99 dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clon...
115
2e-22
100 dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clon...
115
2e-22
101 gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphos...
101
2e-18
102 gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1...
101
2e-18
103 dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate...
98
4e-17
104 gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1...
98
4e-17
105 gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose ...
98
4e-17
106 gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose ...
98
4e-17
107 gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphos...
98
4e-17
108 gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, ...
96
2e-16
109 emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene
96
2e-16
110 dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO...
94
6e-16
111 emb|X65494.1|MSCARB Malus (unidentified species of crab apple) m...
94
6e-16
112 gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5-...
94
6e-16
113 gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate...
92
2e-15
114 gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphospha...
90
9e-15
115 gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphat...
90
9e-15
116 gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphat...
90
9e-15
117 gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose ...
90
9e-15
118 gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose ...
90
9e-15
119 gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphos...
90
9e-15
120 gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphos...
90
9e-15
121 ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carb...
86
1e-13
122 ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carb...
86
1e-13
123 gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom...
86
1e-13
124 gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825)...
86
1e-13
125 gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
126 gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
1e-13
127 gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
128 gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
129 gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
130 gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
131 gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
132 gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
1e-13
133 gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, com...
86
1e-13
134 gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
135 gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
86
1e-13
136 gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, co...
86
1e-13
137 gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A...
86
1e-13
138 gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090...
86
1e-13
139 gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
86
1e-13
140 emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Co...
86
1e-13
141 emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Co...
86
1e-13
142 emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Co...
86
1e-13
143 emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Co...
86
1e-13
144 gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, comp...
86
1e-13
145 emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphat...
86
1e-13
146 emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for...
86
1e-13
147 emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for r...
86
1e-13
148 emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate c...
86
1e-13
149 gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carbox...
86
1e-13
150 gb|AY103730.1| Zea mays PCO095823 mRNA sequence
86
1e-13
151 gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose...
86
1e-13
152 emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ...
86
1e-13
153 gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate ca...
86
1e-13
154 gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5-...
86
1e-13
155 dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphat...
86
1e-13
156 gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbc...
86
1e-13
157 gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2...
86
1e-13
158 gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseu...
84
6e-13
159 gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseu...
84
6e-13
160 gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseu...
84
6e-13
161 gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylas...
84
6e-13
162 ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carb...
82
2e-12
163 ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carb...
82
2e-12
164 ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate c...
82
2e-12
165 gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carbo...
82
2e-12
166 gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, com...
82
2e-12
167 gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791)...
82
2e-12
168 gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b su...
82
2e-12
169 gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphospha...
82
2e-12
170 emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate ...
82
2e-12
171 emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene)
82
2e-12
172 gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, com...
82
2e-12
173 gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 m...
82
2e-12
174 gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, compl...
82
2e-12
175 gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carbox...
82
2e-12
176 gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carbox...
82
2e-12
177 gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
82
2e-12
178 gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mR...
82
2e-12
179 gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphat...
82
2e-12
180 emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
181 emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
182 emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
183 emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
184 emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
185 emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
186 emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
187 emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Co...
82
2e-12
188 gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676)
82
2e-12
189 dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...
82
2e-12
190 gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1...
82
2e-12
191 gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose ...
82
2e-12
192 gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose ...
82
2e-12
193 gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseud...
82
2e-12
194 gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphos...
82
2e-12
195 gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate car...
80
9e-12
196 gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate car...
80
9e-12
197 gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate car...
80
9e-12
198 gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carbo...
80
9e-12
199 gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphos...
80
9e-12
200 emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 ...
78
4e-11
201 emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulos...
78
4e-11
202 gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carbox...
78
4e-11
203 gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphospha...
78
4e-11
204 emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,...
78
4e-11
205 gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylas...
76
1e-10
206 gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate c...
76
1e-10
207 gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphat...
76
1e-10
208 gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphos...
76
1e-10
209 emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Co...
76
1e-10
210 gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
211 gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
212 gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
213 gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
214 gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
215 gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate...
76
1e-10
216 emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subu...
74
6e-10
217 emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Co...
74
6e-10
218 emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Co...
74
6e-10
219 dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulo...
74
6e-10
220 emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco s...
74
6e-10
221 emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate...
74
6e-10
222 emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-bip...
74
6e-10
223 gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulo...
74
6e-10
224 gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose...
74
6e-10
225 gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,...
74
6e-10
226 gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5...
74
6e-10
227 gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,...
74
6e-10
228 gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1...
74
6e-10
229 gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-...
74
6e-10
230 gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulo...
74
6e-10
231 gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribu...
74
6e-10
232 gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribul...
74
6e-10
233 gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,...
74
6e-10
234 gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,...
74
6e-10
235 gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphospha...
74
6e-10
236 dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisp...
74
6e-10
237 gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosp...
72
2e-09
238 gb|AF101233.1|AF101233 Manihot esculenta clone U291 ribulose 1,5...
72
2e-09
239 gb|AF101232.1|AF101232 Manihot esculenta clone U216 ribulose 1,5...
72
2e-09
240 gb|AF101230.1|AF101230 Manihot esculenta clone R312 ribulose 1,5...
72
2e-09
241 gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphat...
72
2e-09
242 gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carb...
72
2e-09
243 emb|X17546.1|EGRBCS Euglena gracilis rbcS mRNA for the small sub...
72
2e-09
244 emb|X79152.1|EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19
72
2e-09
245 gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxyla...
72
2e-09
246 gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6...
72
2e-09
247 dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose...
72
2e-09
248 ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carb...
70
9e-09
249 gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence
70
9e-09
250 emb|X16435.1|SARUBISC Mustard Rubisco mRNA for the small subunit...
70
9e-09
251 emb|X61097.1|BNRBCS B.napus rbcS gene for the small subunit of r...
70
9e-09
252 gb|AY093288.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
253 gb|AY062543.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
254 gb|AY062458.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
255 gb|AY062437.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
256 gb|AY059939.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
257 gb|BT003356.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
258 gb|BT002554.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
259 emb|X05986.1|LERBCS3C Tomato rbcS3C gene for ribulose 1,5-biphos...
70
9e-09
260 emb|X05985.1|LERBCS3B Tomato rbcS3B gene for ribulose 1,5-bispho...
70
9e-09
261 emb|X05984.1|LERBCS3A Tomato rbcS3A gene for ribulose 1,5-bispho...
70
9e-09
262 emb|X03820.1|PERBCS08 Petunia x hybrida rbcS gene (ssu8) for rib...
70
9e-09
263 emb|X75334.1|BNRBCSSW B.napus (Semundo winterraps) rbcS gene
70
9e-09
264 emb|X06558.1|SRRBCS Radish mRNA for ribulose 1,5 bisphoshate car...
70
9e-09
265 gb|BT002094.1| Arabidopsis thaliana ribulose bisphosphate carbox...
70
9e-09
266 gb|M13544.1|TOMRBCSC Tomato (L.esculentum) ribulose-1,5-bisphosp...
70
9e-09
267 gb|M29643.1|PETRBCC Petunia ribulose 1,5-bisphosphate carboxylas...
70
9e-09
268 dbj|D11112.1|TOMRBCO Tomato ribulose 1,5-bisphosphate carboxylas...
70
9e-09
269 gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carbo...
68
3e-08
270 gb|AY267674.1| Bigelowiella natans ribulose-1,5-bisphosphate car...
68
3e-08
271 emb|X66617.1|EGRBCS5 Euglena gracilis partial rbcS gene for ribu...
68
3e-08
272 emb|AJ538400.1|NTA538400 Nicotiana tabacum cDNA-AFLP-fragment BC...
68
3e-08
273 gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate ...
68
3e-08
274 gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxy...
68
3e-08
275 gb|U29933.1|FPU29933 Flaveria pringlei ribulose-1,5-bisphosphate...
68
3e-08
276 gb|M16888.1|SIPRUBPCS White campion ribulose bisphosphate carbox...
68
3e-08
277 dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate ...
68
3e-08
278 gb|AY487801.1| Capsicum annuum Cristal-Glass1 protein mRNA, comp...
66
1e-07
279 emb|AJ786661.1| Limonium gibertii mRNA for ribulose 1,5 bisphosp...
66
1e-07
280 gb|AF396697.1| Nicotiana benthamiana s/s2 mRNA, partial cds
66
1e-07
281 emb|BX841713.1|CNS09YLJ Arabidopsis thaliana Full-length cDNA Co...
66
1e-07
282 dbj|AB120708.1| Physcomitrella patens subsp. patens PprbcS1 mRNA...
66
1e-07
283 emb|X69763.1|STRBCS3 S.tuberosum rbcS3 gene for ribulose-(1,5)-b...
66
1e-07
284 gb|AF162210.1|AF162210 Lactuca sativa ribulose-1,5-bisphosphate ...
66
1e-07
285 gb|AF065615.1|AF065615 Capsicum annuum ribulose 1,5-bisphosphate...
66
1e-07
286 gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxyla...
66
1e-07
287 dbj|AU066498.1| Chlamydomonas sp. HS-5 mRNA for ribulose-bisphos...
66
1e-07
288 gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosph...
64
5e-07
289 emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisph...
64
5e-07
290 gb|AY220079.1| Nicotiana tabacum putative ribulose bisphosphate ...
64
5e-07
291 dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA ...
64
5e-07
292 emb|AJ419826.1|CAR419826 Coffea arabica mRNA for rubisco small s...
64
5e-07
293 emb|X60000.1|PVRBCOS P.vulgaris rbcS mRNA for small subunit of r...
64
5e-07
294 emb|X59999.1|PVRBCS P.vulgaris rbcS mRNA for small subunit of ri...
64
5e-07
295 emb|X98414.1|PVRBCS4SS P.vittata mRNA for rubisco small subunit,...
64
5e-07
296 emb|X57022.1|PVSS15BCO P. vulgaris rbcS cDNA (with intronic sequ...
64
5e-07
297 gb|AF173667.1|AF173667 Beta vulgaris clone RUB109UNI ribulose bi...
64
5e-07
298 gb|AF101231.1|AF101231 Manihot esculenta clone R33 ribulose 1,5-...
64
5e-07
299 gb|AF101228.1|AF101228 Manihot esculenta clone R214 ribulose 1,5...
64
5e-07
300 emb|X84730.1|ASRBCS Artificial rbcS gene sequence
64
5e-07
301 gb|M96583.1|MNHRUBISCO Manihot esculenta ribulose 1,5-bisphospha...
64
5e-07
302 gb|U39858.1|GTU39858 Glycine tabacina ribulose 1,5-bisphosphate ...
64
5e-07
303 gb|M95930.1|MNHRBCSA Manihot esculenta (clone rubssr37) ribulose...
64
5e-07
304 gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5-...
64
5e-07
305 gb|DQ226760.1| Boechera divaricarpa isolate SLW-D-H02 mRNA sequence
62
2e-06
306 emb|AJ843972.1| Plantago major mRNA for Rubisco SSU (rbcs1 gene)
62
2e-06
307 dbj|AB240146.1| Chlorella pyrenoidosa rbcS mRNA for RuBisCO smal...
62
2e-06
308 emb|X53426.1|NSRUBSSU Nicotiana sylvestris NySS41 and partial Ny...
62
2e-06
309 emb|X69762.1|STRBCS2C S.tuberosum rbcS2c gene for ribulose-(1,5)...
62
2e-06
310 emb|X69761.1|STRBCS2B S.tuberosum rbcS2b gene for ribulose-(1,5)...
62
2e-06
311 emb|X69760.1|STRBCS2 S.tuberosum rbcS2 gene for ribulose-(1,5)-b...
62
2e-06
312 gb|M16056.1|CUSSSU Cucumber SSU mRNA encoding ribulose bisphosph...
62
2e-06
313 gb|DQ242646.1| Brassica napus chloroplast ribulose-1,5-bisphosph...
62
2e-06
314 gb|AY530156.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate ...
60
8e-06
315 gb|AY530155.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate ...
60
8e-06
316 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
60
8e-06
317 dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D...
60
8e-06
318 dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic D...
60
8e-06
319 emb|Y00431.1|HARBCS Sunflower rbcS gene for RuBP carboxylase sma...
60
8e-06
320 emb|X13974.1|CMRBPC Chlamydomonas moewusii rbcS mRNA for ribulos...
60
8e-06
321 emb|X05079.1|HARUBISC Sunflower mRNA for ribulose 1,5-bisphospha...
60
8e-06
322 dbj|AK059909.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
8e-06
323 gb|U80810.1|CSU80810 Chloromonas sp. ANT3 ribulose-1,5-bisphosph...
60
8e-06
324 gb|AF139469.2|AF139469 Vigna radiata ribulose-1,5-bisphosphate c...
58
3e-05
325 emb|X51811.1|AMRBCSM1 Acetabularia mediterranea mRNA for ribulos...
58
3e-05
326 emb|Z28640.1|ACRBPCX Acetabularia cliftonii gene for ribulose-1-...
58
3e-05
327 emb|Z28636.1|ACRUBIS Acetabularia cliftonii gene for ribulose-1,...
58
3e-05
328 emb|X05982.1|LERBCS1 Tomato rbcS1 gene for ribulose 1,5-bisphosp...
58
3e-05
329 emb|X54465.1|LLRBC7CM L.laricina mRNA for ribulose bisphosphate ...
58
3e-05
330 emb|X54464.1|LLRBC5CM L.laricina mRNA for ribulose bisphosphate ...
58
3e-05
331 emb|X54462.1|LLRBC3CM L.laricina mRNA for ribulose bisphosphate ...
58
3e-05
332 emb|X54460.1|LLRBC1C L.laricina mRNA for ribulose bisphosphate c...
58
3e-05
333 emb|X77813.1|PVRBCSG P.vittata rbcS gene
58
3e-05
334 emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-ca...
58
3e-05
335 emb|X73136.1|PTRBC P.vittata mRNA for rubisco, small subunit
58
3e-05
336 gb|M15235.1|TOMRBCSD Tomato RuBP carboxylase small subunit LESS1...
58
3e-05
337 gb|M13542.1|TOMRBCSA Tomato (L.esculentum) ribulose-1,5-bisphosp...
58
3e-05
338 gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate c...
58
3e-05
339 gb|DQ178607.1| Haematococcus pluvialis ribulose-1,5-bisphosphate...
56
1e-04
340 gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete s...
56
1e-04
341 gb|AF493617.1| Acetabularia acetabulum ribulose-1,5-bisphosphate...
56
1e-04
342 gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-b...
56
1e-04
343 emb|X51814.1|AMRBCSM4 Acetabularia mediterranea mRNA for ribulos...
56
1e-04
344 emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphospha...
56
1e-04
345 gb|L26605.1|SLARBCS Stellaria longipes ribulose-1,5-bisphosphate...
56
1e-04
346 gb|M60274.1|HEVRBSS Hevea brasiliensis ribulose-1,5-bisphosphate...
56
1e-04
347 gb|AF044397.1|AF044397 Flaveria ramosissima ribulose-1,5-bisphos...
54
5e-04
348 gb|U83979.1|PMU83979 Populus maximowiczii X Populus balsamifera ...
54
5e-04
349 emb|X51813.1|AMRBCSM3 Acetabularia mediterranea mRNA for ribulos...
54
5e-04
350 emb|X51812.1|AMRBCSM2 Acetabularia mediterranea partial mRNA for...
54
5e-04
351 gb|M32420.1|TOBRUBPB Tobacco ribulose-1,5-bisphosphate carboxyla...
54
5e-04
352 gb|M29641.1|PETRBCA Petunia ribulose 1,5-bisphosphate carboxylas...
54
5e-04
353 emb|X92858.1|BPRBCS B.pendula rbcS gene
52
0.002
354 gb|AY382881.1| Spirodela polyrrhiza strain P143 ribulose-1,5-bis...
52
0.002
355 emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose ...
52
0.002
356 emb|X54091.1|GHRBCS G.hirsutum rbcS gene for ribulose-1,5-bispho...
52
0.002
357 dbj|AK058875.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
358 emb|Y07779.1|BPRBCSSU Betula pendula mRNA for ribulose-1,5-bisph...
52
0.002
359 gb|U05590.1|ASU05590 Anabaena sp. ribulose 1,5-bisphosphate carb...
52
0.002
360 gb|J01256.1|PEARBPC Pisum sativum ribulose-1,5-bisphosphate carb...
50
0.008
361 gb|M25613.1|PEARUBP2 Pisum sativum ribulose 1,5 bisphosphate car...
50
0.008
362 emb|X04334.1|PSRBCS3C Pea rbcS-3C gene for ribulose 1.5-bisphosp...
50
0.008
363 emb|X04333.1|PSRBCS3A Pea rbcS-3A gene for ribulose 1.5-bisphosp...
50
0.008
364 emb|X00806.1|PSRC01 Pea gene for rib-1,5-bisphospate carboxylase...
50
0.008
365 emb|X54463.1|LLRBC4CM L.laricina mRNA for ribulose bisphosphate ...
50
0.008
366 gb|J01257.1|PEARUBPA Pea (P.sativum) ribulose 1,5-bisphosphate c...
50
0.008
367 gb|BT013023.1| Lycopersicon esculentum clone 114270R, mRNA sequence
48
0.032
368 emb|X04471.1|CRRBCS1 Chlamydomonas reinhardtii nuclear gene rbcS...
48
0.032
369 gb|AY267675.1| Bigelowiella natans ribulose-1,5-bisphosphate car...
48
0.032
370 gb|AY205158.1| Volvox carteri ribulose-bisphosphate carboxylase ...
48
0.032
371 emb|X04472.1|CRRBCS2 Chlamydomonas reinhardtii nuclear gene rbcS...
48
0.032
372 emb|AJ131050.1|CAR131050 Cicer arietinum mRNA for ribulose 1,5-b...
48
0.032
373 emb|X51808.1|ACRBCSC3 Acetabularia cliftonii mRNA for ribulose 1...
48
0.032
374 emb|X05983.1|LERBCS2 Tomato rbcS2 gene for ribulose 1,5-bisphosp...
48
0.032
375 emb|X69759.1|STRBCS1 S.tuberosum rbcS1 gene for ribulose-(1,5)-b...
48
0.032
376 gb|M15236.1|TOMRBCSE Tomato RuBP carboxylase small subunit LESS5...
48
0.032
377 gb|M13543.1|TOMRBCSB Tomato (L.esculentum) ribulose-1,5-bisphosp...
48
0.032
378 gb|AC117757.23| Mus musculus chromosome 1, clone RP24-420I4, com...
46
0.13
379 gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, com...
46
0.13
380 emb|AJ538410.1|NTA538410 Nicotiana tabacum cDNA-AFLP-fragment BC...
46
0.13
381 emb|X96847.1|MSRBCSK1A M.sativa Rbcsk-1A gene
46
0.13
382 gb|AC138382.10| Mus musculus chromosome 1, clone RP24-400E14, co...
44
0.50
383 ref|NM_144845.2| Mus musculus UDP glycosyltransferases 3 family,...
44
0.50
384 ref|XM_728614.1| Plasmodium chabaudi chabaudi hypothetical prote...
44
0.50
385 gb|BC022134.1| Mus musculus UDP glycosyltransferases 3 family, p...
44
0.50
386 gb|BC034837.1| Mus musculus UDP glycosyltransferases 3 family, p...
44
0.50
387 dbj|AK143815.1| Mus musculus 6 days neonate spleen cDNA, RIKEN f...
44
0.50
388 gb|AY048671.1| Sequoia sempervirens ribulose-1,5-bisphosphate ca...
44
0.50
389 dbj|AK052644.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu...
44
0.50
390 dbj|AK050128.1| Mus musculus adult male liver tumor cDNA, RIKEN ...
44
0.50
391 dbj|AK041045.1| Mus musculus adult male aorta and vein cDNA, RIK...
44
0.50
392 dbj|AB125314.1| Nannochloris bacillaris NbrbcS2, Akl, NbSep, PAB...
44
0.50
393 emb|X54461.1|LLRBC2CM L.laricina mRNA for ribulose bisphosphate ...
44
0.50
394 dbj|AP006376.1| Lotus japonicus genomic DNA, chromosome 1, clone...
44
0.50
395 emb|CT009696.9| Mouse DNA sequence from clone RP23-11B13 on chro...
42
2.0
396 emb|AL607043.12| Human DNA sequence from clone RP11-309P22 on ch...
42
2.0
397 emb|AL357353.12| Human DNA sequence from clone RP11-251L16 on ch...
42
2.0
398 emb|AL161790.23| Human DNA sequence from clone RP11-558L8 on chr...
42
2.0
399 emb|AL022345.2|HSY738F9 Human DNA sequence from clone XX-Y738F9 ...
42
2.0
400 gb|AF411547.1| Medicago sativa ribulose-1,5-bisphosphate carboxy...
42
2.0
401 gb|AF150667.1|AF150667 Amaranthus hypochondriacus ribulose 1,5 b...
42
2.0
402 gb|AF056315.1|AF056315 Medicago sativa ribulose-1,5-bisphosphate...
42
2.0
403 gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome ...
42
2.0
404 emb|AL590997.13| Mouse DNA sequence from clone RP23-132J20 on ch...
42
2.0
405 dbj|AB047542.1| Lilium longiflorum rbcS mRNA for ribulose 1,5 bi...
42
2.0
406 gb|AC134662.11| Mus musculus chromosome 15, clone RP24-445D14, c...
40
7.8
407 gb|AC115930.10| Mus musculus chromosome 3, clone RP24-534H10, co...
40
7.8
408 gb|AC138395.8| Mus musculus chromosome 3, clone RP24-128I24, com...
40
7.8
409 gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr...
40
7.8
410 gb|AC102856.5| Mus musculus chromosome 8, clone RP24-500H8, comp...
40
7.8
411 gb|AY531637.1| Solemya velum gill symbiont ribulose-1,5-bisphosp...
40
7.8
412 gb|AC112739.5| Rattus norvegicus 7 BAC CH230-108A12 (Children's ...
40
7.8
413 gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, c...
40
7.8
414 ref|XM_955568.1| Neurospora crassa OR74A hypothetical protein (N...
40
7.8
415 gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co...
40
7.8
416 ref|XM_327018.1| Neurospora crassa OR74A hypothetical protein (N...
40
7.8
417 gb|AC119864.9| Mus musculus chromosome 18, clone RP23-325I21, co...
40
7.8
418 gb|AC145800.2| Xenopus tropicalis clone CH216-60E16, complete se...
40
7.8
419 ref|XM_572904.1| Cryptococcus neoformans var. neoformans JEC21 p...
40
7.8
420 gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet...
40
7.8
421 ref|XM_669305.1| Plasmodium berghei strain ANKA hypothetical pro...
40
7.8
422 emb|AL356534.12| Human DNA sequence from clone RP11-629P13 on ch...
40
7.8
423 emb|AL354883.14| Human DNA sequence from clone RP1-67N4 on chrom...
40
7.8
424 gb|AC159968.3| Mus musculus chromosome 3, clone RP23-256J12, com...
40
7.8
425 emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom...
40
7.8
426 ref|NM_001002110.1| Danio rerio zgc:86839 (zgc:86839), mRNA
40
7.8
427 gb|AC063968.5| Genomic sequence for Mus musculus, clone RP23-105...
40
7.8
428 emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 i...
40
7.8
429 gb|BC071486.1| Danio rerio zgc:86839, mRNA (cDNA clone MGC:86839...
40
7.8
430 gb|AC011419.7| Homo sapiens chromosome 5 clone CTD-2029I9, compl...
40
7.8
431 emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ...
40
7.8
432 gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp...
40
7.8
433 gb|AC099779.2| Homo sapiens chromosome 3 clone RP11-760G13, comp...
40
7.8
434 gb|AC091827.2| Homo sapiens chromosome 5 clone CTD-2006A19, comp...
40
7.8
435 gb|AC163694.2| Mus musculus BAC clone RP24-80O2 from chromosome ...
40
7.8
436 gb|AC151901.3| Mus musculus BAC clone RP23-271E15 from chromosom...
40
7.8
437 gb|AC124982.13| Mus musculus chromosome 3, clone RP24-173F6, com...
40
7.8
438 emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch...
40
7.8
439 dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.8
440 dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D...
40
7.8
441 emb|X51810.1|ACRBCSC5 Acetabularia cliftonii mRNA for ribulose 1...
40
7.8
442 emb|X51807.1|ACRBCSC2 Acetabularia cliftonii partial mRNA ribulo...
40
7.8
443 emb|AL096869.8|CNS00YVH Human chromosome 14 DNA sequence BAC R-1...
40
7.8
444 emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chr...
40
7.8
445 dbj|AP002004.4| Homo sapiens genomic DNA, chromosome 11q, clone:...
40
7.8
446 gb|AC133943.3| Mus musculus BAC clone RP24-104D12 from 3, comple...
40
7.8
447 emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr...
40
7.8
448 emb|AL772312.6| Mouse DNA sequence from clone RP23-91D16 on chro...
40
7.8
449 emb|AL139193.4|CNS01DXA Human chromosome 14 DNA sequence BAC R-6...
40
7.8
450 emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chrom...
40
7.8
>gb| U43493.1 |HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 816
Score = 942 bits (475), Expect = 0.0
Identities = 557/573 (97%), Gaps = 10/573 (1%)
Strand = Plus / Minus
Query: 1 cgaatacatattacatagtcgacagattgtataatattatgtgcatgtgcatatacatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 cgaatacatattacatagtcgacagattgtataatattatgtgcatgtgcatatacatag 719
Query: 61 ccaccgatagcattcacatacgagcatgctttctcgagccatgttggtacatgaacatgg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 718 ccaccgatagcattcacatacgagcatgctttctcgagc-atgttggtacatgaacatgg 660
Query: 121 gcatacacacatttttaggaacaaataagaaagataatggagaaggaaaacccaaagcaa 180
| |||||||||||| |||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 659 gactacacacatttt-aggaacaa-taagaaagataatggagaaggaaaacc--aagca- 605
Query: 181 tgtcagagttgacaaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtt 240
|||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 604 tgtcagagttgacaaa-ctgcaatggcactt-atatgtg-cccatcgtcagtgagctgtt 548
Query: 241 tatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgc 300
||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 547 tatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcactgc 488
Query: 301 acctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 acctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttg 428
Query: 361 acctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 acctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttc 368
Query: 421 cacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatg 308
Query: 481 aacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgac 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 307 aacccaaccttgctgaactcgaggcaaggcacccacttggagcggatc-aggtagtcgac 249
Query: 541 ctgcttaaggagggcctncgtgctgagtggtgg 573
||||||||||||||||| |||||||||||||||
Sbjct: 248 ctgcttaaggagggcctccgtgctgagtggtgg 216
>emb| AJ131738.1 |SCE131738 Secale cereale mRNA for hypothetical protein, clone 9
Length = 875
Score = 886 bits (447), Expect = 0.0
Identities = 532/558 (95%), Gaps = 2/558 (0%)
Strand = Plus / Minus
Query: 21 gacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcacata 80
|||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 834 gacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcacata 775
Query: 81 cgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacatttttagga 140
|||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||
Sbjct: 774 cgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattcttagga 715
Query: 141 acaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgacaaaact 199
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 714 acaaataagaaagataaatggacaaggaaaacccaaagcaatgtcagagttgacaaaact 655
Query: 200 gcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccggactcct 259
|||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||
Sbjct: 654 gcaatggcactttatatgcggcccgtggtgagtgagctgtttatgccttgccggactcct 595
Query: 260 cgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcga 319
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 594 cgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctggcgcatgttgtcga 535
Query: 320 atccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttga 379
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 atccgatgatgcggacgtacgcgtcagggtactccttcttgacctcctccacctcgttga 475
Query: 380 gcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggc 439
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtaccggc 415
Query: 440 catcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaact 499
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 catcgtagtacccgggagacgcgttgtgctcacggaagatgaacccaaccttgctgaact 355
Query: 500 cgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggcctnc 559
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |
Sbjct: 354 cgaggcaaggcacccacttggagcggatc-aggtagtcgacctgcttgaggagggcctcc 296
Query: 560 gtgctgagtggtggcaag 577
||| |||| |||||||||
Sbjct: 295 gtggtgagcggtggcaag 278
>emb| X00234.1 |TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
4.1.1.39) (ribulosebisphosphate carboxylase, clone 512)
Length = 611
Score = 842 bits (425), Expect = 0.0
Identities = 534/567 (94%), Gaps = 4/567 (0%)
Strand = Plus / Minus
Query: 12 tacatagtcgacagattgtataatat--tatgtgcatgtgcatatacatagccaccgata 69
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 573 tacatagtcgacagattgtataatatattatgtgcatgtgcatatacatagccaccgatt 514
Query: 70 gcattcacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacaca 129
||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 513 gcattcacatacgagcacgctttctcgagccatgttgttacatgaacatggacatacaca 454
Query: 130 catttttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagag 188
||| |||||||||| ||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 453 tattcttaggaacaagtaagaaagacaaatggagaaggaaaacccaaagcaatgtcagag 394
Query: 189 ttgacaaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgcctt 248
||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||||
Sbjct: 393 ttgacaaaactgcaatggcactttatatgtggcccgtggtgagtgagctgtttaggcctt 334
Query: 249 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 308
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 333 gccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcactgcacctggcg 274
Query: 309 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 368
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 273 catgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttcttgacctcctc 214
Query: 369 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 428
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 213 cacctcgttgatcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgt 154
Query: 429 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 488
|||||| ||||| ||||||||||| ||||| || ||||||||||||||||||||||| ||
Sbjct: 153 ccagtagcggccgtcgtagtacccgggagacgcattgtgctcacggaagatgaacccgac 94
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaa 548
|||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct: 93 cttgctgaactcaaggcaaggcacccacttggagcggatc-aggtagtccacctgcttga 35
Query: 549 ggagggcctncgtgctgagtggtggca 575
||||||||| ||||||||| |||||||
Sbjct: 34 ggagggcctccgtgctgagcggtggca 8
>emb| X83095.1 |ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase, small subunit
Length = 837
Score = 743 bits (375), Expect = 0.0
Identities = 519/562 (92%), Gaps = 4/562 (0%)
Strand = Plus / Minus
Query: 18 gtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcattcac 77
||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 797 gtcgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcattcac 738
Query: 78 atacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattttta 137
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||
Sbjct: 737 atacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattctta 678
Query: 138 ggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgacaaa 196
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgacaaa 618
Query: 197 actgcaatggcactttatatgt-ggcccatcgtcagtgagctgtttatgccttgccggac 255
|||||||||||||||| ||| | |||| |||| ||||||||||||| ||||||||||||
Sbjct: 617 actgcaatggcacttt-tatataggcctgtcgtgagtgagctgtttaggccttgccggac 559
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 558 tcctcgcagcccggtggcttggaggcgatgaagctgacggactgcacctgacgcatgttg 499
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|||||||||||||||||| ||| | |||||||||||||||| |||||||||||||||||
Sbjct: 498 tcgaatccgatgatgcggcaataggggtcagggtactccttcctgacctcctccacctcg 439
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|| |||||| |||| | ||| ||||||||||||||| || ||||||||||||||||||
Sbjct: 438 gggatcacctgggtgggggcggggcatccgaacatagggagtttccacattgtccagtac 379
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 378 cggccatcgtagtacccaggggatacgttgtgttcacggaagatgaacccaacctttcta 319
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 318 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttaaggaggcc 260
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||||||||| |||||||||
Sbjct: 259 ctccgtgctgagcggtggcaag 238
>dbj| AB042066.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p9-1
Length = 739
Score = 581 bits (293), Expect = e-162
Identities = 323/332 (97%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 616
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 615 tcctccacctcgttgatcacctgtgtggcgtcagtgcacccgaacataggcagcttccac 556
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 attgtccaataccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 496
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 495 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatc-aggtagtcgacctg 437
Query: 544 cttaaggagggcctncgtgctgagtggtggca 575
||| |||||||||| ||||||||| |||||||
Sbjct: 436 cttgaggagggcctccgtgctgagcggtggca 405
>emb| X00235.1 |TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC
4.1.1.39 ribulosebisphosphate carboxylase) clones 234
and 406
Length = 743
Score = 573 bits (289), Expect = e-160
Identities = 344/361 (95%), Gaps = 1/361 (0%)
Strand = Plus / Minus
Query: 15 atagtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcatt 74
|||||||||| |||||||||||||||| | || |||||||||||||||||||||||||
Sbjct: 719 atagtcgacatattgtataatattatgcgtccgttcatatacatagccaccgatagcatt 660
Query: 75 cacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattt 134
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 659 ctcatacgagcatgctttctcgagccatgttggtacatgaacatggacatacacatattc 600
Query: 135 ttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgac 193
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgac 540
Query: 194 aaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccgg 253
||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||
Sbjct: 539 aaaactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgccgg 480
Query: 254 actcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgt 313
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 actcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgt 420
Query: 314 tgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacct 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacct 360
Query: 374 c 374
|
Sbjct: 359 c 359
Score = 200 bits (101), Expect = 4e-48
Identities = 119/124 (95%), Gaps = 1/124 (0%)
Strand = Plus / Minus
Query: 452 caggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggca 511
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 caggtgatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggca 222
Query: 512 cccacttggagcggatcaaggtagtcgacctgcttaaggagggcctncgtgctgagtggt 571
||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||
Sbjct: 221 cccacttggagcggatc-aggtagtcgacctgcttgaggagggcctccgtgctgagcggt 163
Query: 572 ggca 575
||||
Sbjct: 162 ggca 159
>dbj| AB042064.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p2-1
Length = 653
Score = 557 bits (281), Expect = e-155
Identities = 320/332 (96%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 530
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 529 tcctccacctcgttgatcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 470
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 469 attgtccagtaccggccatcgtagtacccaggggatgcgttgtgctcacggaagataaac 410
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 409 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatc-aggtagtcgacctg 351
Query: 544 cttaaggagggcctncgtgctgagtggtggca 575
||| |||||||||| |||||||| |||||||
Sbjct: 350 cttgaggagggcctctgtgctgagcggtggca 319
>gb| K02324.1 |WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase
small subunit mRNA, clone pTS406, 3' end
Length = 317
Score = 446 bits (225), Expect = e-122
Identities = 277/293 (94%), Gaps = 1/293 (0%)
Strand = Plus / Minus
Query: 15 atagtcgacagattgtataatattatgtgcatgtgcatatacatagccaccgatagcatt 74
|||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 293 atagtcgacatattgtataatattatgcgtccgtgcatatacatagccaccgatagcatt 234
Query: 75 cacatacgagcatgctttctcgagccatgttggtacatgaacatgggcatacacacattt 134
||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||
Sbjct: 233 cacatacgagcatgctttctcgagccatgttcgtacatgaacatggacatacacatattc 174
Query: 135 ttaggaacaaataagaaagataa-tggagaaggaaaacccaaagcaatgtcagagttgac 193
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 173 ttaggaacaaataagaaagataaatggagaaggaaaacccaaagcaatgtcagagttgac 114
Query: 194 aaaactgcaatggcactttatatgtggcccatcgtcagtgagctgtttatgccttgccgg 253
||||||||||||||||||||||| ||||| |||| ||||||||||||| ||||||||||
Sbjct: 113 aaaactgcaatggcactttatatatggcctgtcgtgagtgagctgtttaggccttgccgg 54
Query: 254 actcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctga 306
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 53 actcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctga 1
>emb| AJ131737.1 |SCE131737 Secale cereale mRNA for hypothetical protein, clone 5
Length = 845
Score = 438 bits (221), Expect = e-120
Identities = 310/339 (91%), Gaps = 1/339 (0%)
Strand = Plus / Minus
Query: 239 tttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcact 298
|||||||||||||||| |||||||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537
Query: 299 gcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttct 358
||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||||
Sbjct: 536 gcacctggcgcatgttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 477
Query: 359 tgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagct 418
|||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||
Sbjct: 476 tgacctcctccacctcattgagcacctgcgtggcgtcggtgcacccgaacataggcaact 417
Query: 419 tccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaaga 478
|||||||||||||||| || || ||||||||||| || || |||||||||||||||||
Sbjct: 416 tccacattgtccagtatcgaccgtcgtagtacccgggggagttgttgtgctcacggaaga 357
Query: 479 tgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcg 538
||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 356 cgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatc-aggtagtcg 298
Query: 539 acctgcttaaggagggcctncgtgctgagtggtggcaag 577
|||||||| |||||||||| |||| ||| |||||||||
Sbjct: 297 acctgcttcaggagggcctccgtggagaggggtggcaag 259
>gb| M37328.1 |WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO)
gene, exons 1 and 2
Length = 2205
Score = 438 bits (221), Expect = e-120
Identities = 288/309 (93%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 238 gtttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcac 297
||||| |||||||||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct: 1511 gtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 1452
Query: 298 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 357
|||||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||
Sbjct: 1451 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1392
Query: 358 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagc 417
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1391 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagc 1332
Query: 418 ttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaag 477
||||||||||||||||| || || ||||||||||| ||||| ||||||||||||||||
Sbjct: 1331 ttccacattgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaag 1272
Query: 478 atgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtc 537
| ||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 1271 acgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatc-aggtagtc 1213
Query: 538 gacctgctt 546
|||||||||
Sbjct: 1212 gacctgctt 1204
>gb| M37477.1 |WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
(RUBISCO) gene, complete cds
Length = 779
Score = 434 bits (219), Expect = e-118
Identities = 306/334 (91%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
||||||||||| |||||||||||||||||| ||||||| |||||||||||||| ||||||
Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| |||||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||
Sbjct: 521 tggcgcatgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttcttaacc 462
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 461 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 402
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
||||||||||| || || ||||||||||| || || ||||||||||||||||| |||
Sbjct: 401 attgtccagtatcgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaag 342
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 341 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaa-gtagtcgacctg 283
Query: 544 cttaaggagggcctncgtgctgagtggtggcaag 577
||| | |||||||| |||| ||| |||||||||
Sbjct: 282 cttcaagagggcctccgtggagaggggtggcaag 249
>dbj| AB042065.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase Small subunit, complete cds,
clone:p6-1
Length = 638
Score = 428 bits (216), Expect = e-117
Identities = 308/335 (91%), Gaps = 3/335 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
|||||||||||||||||||| || |||||| |||| ||||||||||||||||||||||||
Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 515
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 514 tcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccac 455
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaa 482
||||||||||| || || ||||||||||| |||| || ||||||||||||||||| |||
Sbjct: 454 attgtccagtatcgaccgtcgtagtaccc-ggaggagctgttgtgctcacggaagacgaa 396
Query: 483 cccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacct 542
||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 395 gccaaccttgctgaactcgaggcagggcacccacttggagcggatc-aggtagtcgacct 337
Query: 543 gcttaaggagggcctncgtgctgagtggtggcaag 577
|||| |||||||||| |||| ||| |||||||||
Sbjct: 336 gcttcaggagggcctccgtggagaggggtggcaag 302
>dbj| AB020952.1 | Aegilops searsii DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sea-B
Length = 728
Score = 426 bits (215), Expect = e-116
Identities = 296/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tcgaagccgatgacgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 609
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 608 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 549
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || || ||||| ||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct: 548 cgaccgtcatagtaaccaggggagctgttgtgctcacggaagacgaagccaaccttgctg 489
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 488 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 430
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 429 ctccgtggagaggggtggcaag 408
>dbj| AB020944.1 | Agropyron intermedium DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Agr-A
Length = 604
Score = 426 bits (215), Expect = e-116
Identities = 296/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020943.1 | Hordeum vulgare DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Hor-A
Length = 605
Score = 426 bits (215), Expect = e-116
Identities = 296/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttaagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtcaacctgcttcaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| |||| |||||||||
Sbjct: 306 ctccgtggtgaggggtggcaag 285
>dbj| AB020960.1 | Bromus catharticus DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bro-B
Length = 784
Score = 426 bits (215), Expect = e-116
Identities = 296/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 724 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttgacctcctccagctcc 665
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 664 ttgatcacctgtgaggcatcggtgcatccgaacataggcaacttccacattgtccagtaa 605
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 604 cggccatcgtagtatccaggagatgcattgtgctcacggaagacgaagccaaccttgctg 545
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||||||
Sbjct: 544 aactcgaggcacggcacccacttggagcggatcaa-gtagtcgatctgcttcaggagggc 486
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 485 ctcggtggagaggggtggcaag 464
>dbj| AB042068.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p13-1
Length = 985
Score = 426 bits (215), Expect = e-116
Identities = 305/334 (91%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
|||||||||||||||||||| || |||||| ||||||| |||||||||||||||||||||
Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| || | ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 862
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 861 tcctccacctcgttgagcacctgtgtagcgtcggtgcacccgaacataggcagcttccac 802
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
||||||||||| || |||||||||||||| || || ||||||||||||||| | |||
Sbjct: 801 attgtccagtatcgaccatcgtagtacccgggggagctgttgtgctcacggaaaacgaag 742
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 741 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaa-gtagtcgacctg 683
Query: 544 cttaaggagggcctncgtgctgagtggtggcaag 577
||| |||||||||| |||| ||| |||||||||
Sbjct: 682 cttcaggagggcctccgtggagaggggtggcaag 649
>dbj| AB042069.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:6, subclone:16
Length = 5980
Score = 424 bits (214), Expect = e-115
Identities = 312/341 (91%), Gaps = 3/341 (0%)
Strand = Plus / Minus
Query: 238 gtttatgccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcac 297
||||| |||||||| ||||||||||| || |||||| |||| ||||||||||||||||||
Sbjct: 1265 gtttaggccttgccagactcctcgcaacccggtggcctgaatgcgatgaagctgacgcac 1206
Query: 298 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 357
|||||||| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||
Sbjct: 1205 tgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttc 1146
Query: 358 ttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagc 417
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 1145 ttgacctcctccacctcgttgagcacctgcgtggcgtcggtgcacccgaacataggcagc 1086
Query: 418 ttccacattgtccagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaa 476
||||||||||||||||| || || ||||||||||| |||| || |||||||||||||||
Sbjct: 1085 ttccacattgtccagtatcgaccgtcgtagtaccc-ggaggagctgttgtgctcacggaa 1027
Query: 477 gatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagt 536
|| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 1026 gacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatc-aggtagt 968
Query: 537 cgacctgcttaaggagggcctncgtgctgagtggtggcaag 577
|||||||||| |||||||||| |||| ||| |||||||||
Sbjct: 967 cgacctgcttcaggagggcctccgtggagaggggtggcaag 927
Score = 268 bits (135), Expect = 2e-68
Identities = 247/283 (87%), Gaps = 1/283 (0%)
Strand = Plus / Minus
Query: 275 tgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 334
|||||| |||||| ||||||| |||||||| | |||||||||||| ||| |||| |||
Sbjct: 5632 tgaaggtgatgaaagtgacgcaatgcacctggcacatgttgtcgaagccgttgataagga 5573
Query: 335 catacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgt 394
|||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5572 catagccgtcaaggtactccttcttgacctcctccacctccttgagcacctgtgtggcgt 5513
Query: 395 cggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccag 454
| ||||| ||||||||||||| ||||||| |||||| ||| | |||||| ||||||||||
Sbjct: 5512 cagtgcacccgaacataggcaacttccactttgtccggtatcagccatcatagtacccag 5453
Query: 455 gagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcaccc 514
| || |||||||||||||||| ||| | ||||||||||| |||||||| |||||||
Sbjct: 5452 gggagttattgtgctcacggaagacgaagctgaccttgctgaagtcgaggcagggcaccc 5393
Query: 515 acttggagcggatcaaggtagtcgacctgcttaaggagggcct 557
|||||||||||||| ||||||| ||||||| ||||||||||||
Sbjct: 5392 acttggagcggatc-aggtagttgacctgcgtaaggagggcct 5351
Score = 234 bits (118), Expect = 3e-58
Identities = 242/282 (85%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 276 gaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggac 335
||||| ||||||||||||||||| |||||| |||| ||||||||| |||||||||| |||
Sbjct: 4288 gaaggtgatgaagctgacgcactacacctggcgcaggttgtcgaagccgatgatgcagac 4229
Query: 336 atacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtc 395
||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 4228 ataggcgtcagggtactccttcttgacctcctccacctccttgagcaccttcttggtgtc 4169
Query: 396 ggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagg 455
|||||| || || ||||| |||||||||||||| |||| || || |||||||||||
Sbjct: 4168 ggtgcacccaaagataggtagcttccacattgtttagtattagcggtcatagtacccagg 4109
Query: 456 agatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcaccca 515
|| ||| |||||||||| ||||| |||| || |||||||||||||| ||||| ||
Sbjct: 4108 ggacctattgcgctcacggaatatgaagccaatgttactgaactcgaggcagggcactca 4049
Query: 516 cttggagcggatcaaggtagtcgacctgcttaaggagggcct 557
||||||| ||||| ||||||||||||||||| ||||||||||
Sbjct: 4048 cttggaggggatc-aggtagtcgacctgcttgaggagggcct 4008
>emb| AJ635206.1 | Triticum durum ssp. durum partial mRNA for putative rubisco small
subunit (rbcS gene)
Length = 518
Score = 422 bits (213), Expect = e-115
Identities = 303/332 (91%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
|||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| |||| ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 395
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 394 tcctccacctcgttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccac 335
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
||||||||||| || || || ||||| || || || |||||||||||||||| |||
Sbjct: 334 attgtccagtatcgaccgtcatagtatccgggggagctattgtgctcacggaagacgaaa 275
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 274 ccaaccttgctgaactcgaggcagggcacccacttggagcggatcaa-gtagtcgacctg 216
Query: 544 cttaaggagggcctncgtgctgagtggtggca 575
||| |||||||||| |||| ||| |||||||
Sbjct: 215 cttcaggagggcctccgtggagaggggtggca 184
>dbj| AB020955.1 | Triticum timopheevii subsp. armeniacum DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Ara-B
Length = 787
Score = 418 bits (211), Expect = e-114
Identities = 295/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 547 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 489
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 488 ttccgtggagaggggtggcaag 467
>dbj| AB020938.1 | Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Squ-A
Length = 607
Score = 418 bits (211), Expect = e-114
Identities = 295/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 547 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 488
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 487 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 428
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 427 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 368
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 367 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 309
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 308 ctccgtggagaggggtggcaag 287
>dbj| AB020935.1 | Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sha-A
Length = 605
Score = 418 bits (211), Expect = e-114
Identities = 295/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatcaa-gtagtcgacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020959.1 | Secale cereale DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sec-B
Length = 789
Score = 410 bits (207), Expect = e-111
Identities = 285/310 (91%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 268 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 327
|||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 777 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 718
Query: 328 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 387
| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 717 acgcggacataggcgtcagggtactccttcttgacctcctccacctcattgagcacctga 658
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
|||||||||||||| |||||||||||||||||||||||||||||||| || || ||||||
Sbjct: 657 gtggcgtcggtgcacccgaacataggcagcttccacattgtccagtatcgaccgtcgtag 598
Query: 448 tacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaa 507
||||| ||||| ||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 597 tacccgggagagctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcag 538
Query: 508 ggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggcctncgtgctgag 567
||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||
Sbjct: 537 ggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggcctccgtggagag 479
Query: 568 tggtggcaag 577
|||||||||
Sbjct: 478 gggtggcaag 469
>dbj| AB020954.1 | Triticum urartu DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Ura-B
Length = 787
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || || |||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgtagtgctcacggaagacgaagccaaccttgctg 548
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 547 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 489
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 488 ttccgtggagaggggtggcaag 467
>dbj| AB020950.1 | Aegilops sharonensis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sha-B
Length = 792
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 552 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 494
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 493 ttccgtggagaggggtggcaag 472
>dbj| AB020949.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-B
Length = 792
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 672 ttgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 613
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| ||||||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 612 cgaccatcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 553
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 552 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 494
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 493 ttccgtggagaggggtggcaag 472
>dbj| AB020937.1 | Aegilops searsii DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sea-A
Length = 611
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 551 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 492
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 491 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 432
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 431 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 372
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 371 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 313
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 312 ctccgtggagaggggtggcaag 291
>dbj| AB020936.1 | Aegilops bicornis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bic-A
Length = 605
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataagcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 306 ctccgtggagaggggtggcaag 285
>dbj| AB020930.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A2
Length = 604
Score = 410 bits (207), Expect = e-111
Identities = 294/322 (91%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020948.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-B
Length = 772
Score = 404 bits (204), Expect = e-109
Identities = 282/307 (91%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 712 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 653
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 652 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 593
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 592 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 533
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 532 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 474
Query: 556 ctncgtg 562
|| ||||
Sbjct: 473 ctccgtg 467
>dbj| AB020946.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe1-B
Length = 787
Score = 402 bits (203), Expect = e-109
Identities = 293/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 668
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ctgagcacctgtgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 547 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 489
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 488 ctccgtggagaggggtggcaag 467
>dbj| AB020931.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A3
Length = 604
Score = 402 bits (203), Expect = e-109
Identities = 293/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||| || ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020929.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe3-A1
Length = 604
Score = 402 bits (203), Expect = e-109
Identities = 293/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagagtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020927.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe1-A1
Length = 604
Score = 402 bits (203), Expect = e-109
Identities = 293/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020926.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds
Length = 604
Score = 402 bits (203), Expect = e-109
Identities = 293/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB042067.1 | Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds,
clone:p10-1
Length = 629
Score = 402 bits (203), Expect = e-109
Identities = 302/334 (90%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 244 gccttgccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacc 303
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566
Query: 304 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 363
|| |||| ||||||||| ||| ||| |||||||| || |||||||||||||||||||||
Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttcttgacc 506
Query: 364 tcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccac 423
|||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 505 tcctccacctcgttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccac 446
Query: 424 attgtccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaac 483
||||||||||| || || ||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 445 attgtccagtatcgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaag 386
Query: 484 ccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctg 543
||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||
Sbjct: 385 ccaaccttgctaaactcgaggcagggcacccacttggagcggatc-aggtagtctacctg 327
Query: 544 cttaaggagggcctncgtgctgagtggtggcaag 577
||| |||||||||| ||| ||| |||||||||
Sbjct: 326 ctttaggagggcctctgtggagaggggtggcaag 293
>dbj| AB020958.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-B2
Length = 781
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 662
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||
Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccaaacatgggcagcttccacattgtccagtat 602
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 542
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 541 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 483
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 482 ttccgtggagaggggtggcaag 461
>dbj| AB020953.1 | Aegilops squarrosa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Squ-B
Length = 781
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 662
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 661 ttgagcacctgtgtggcgtcggtgcacccgaacatgggcagcttccacattgtccagtat 602
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| || || |||||||||
Sbjct: 601 cgaccgtcgtagtacccgggggagctgttgtgctcacggaagacgatgcctaccttgctg 542
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 541 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggc 483
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 482 ttccgtggagaggggtggcaag 461
>dbj| AB020934.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A3
Length = 605
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020933.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A2
Length = 605
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020932.1 | Aegilops longissima DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Lon-A1
Length = 605
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 485 ttgagcacctgcgtggcgtcggtgcacccgaacataggtagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 425 cgtccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtcgacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020928.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe2-A
Length = 604
Score = 394 bits (199), Expect = e-106
Identities = 292/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| |||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|| || ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcaaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 484 ttgagcacctgtgtggcgtcggtgcacccgaacatagggagcttccacattgtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020951.1 | Aegilops bicornis DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Bic-B
Length = 783
Score = 387 bits (195), Expect = e-104
Identities = 282/310 (90%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 268 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 327
|||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 776 ggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccgatg 717
Query: 328 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 387
| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 716 acacggacataggcgtcagggtactccttcttgacctcctccacctcattgagcacctgt 657
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
|||||||||||||| |||||||||||||||||||||||||||||||| || | |||||||
Sbjct: 656 gtggcgtcggtgcaaccgaacataggcagcttccacattgtccagtatcgactatcgtag 597
Query: 448 tacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaa 507
||||| || || ||||||||||||||||| ||| ||||||||||| |||||||||||
Sbjct: 596 tacccgggggagctgttgtgctcacggaagacgaagccaaccttgctaaactcgaggcag 537
Query: 508 ggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggcctncgtgctgag 567
||||||||||||||||||||| ||||||||||||||||| |||||||| | |||| |||
Sbjct: 536 ggcacccacttggagcggatc-aggtagtcgacctgcttcaggagggcttccgtggagag 478
Query: 568 tggtggcaag 577
|||||||||
Sbjct: 477 gggtggcaag 468
>dbj| AB020941.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-A
Length = 605
Score = 387 bits (195), Expect = e-104
Identities = 291/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtctacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020940.1 | Triticum turgidum subsp. dicoccoides DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Dic-A
Length = 605
Score = 387 bits (195), Expect = e-104
Identities = 291/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 ttgagcacttgcgtggcgtcggtgcacccgaacataggcagcttccacattgtccagtat 426
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
|| || ||||||||||| ||||| ||||||||||||||||| ||| |||||||||||
Sbjct: 425 cgaccgtcgtagtacccgggagagctgttgtgctcacggaagacgaagccaaccttgcta 366
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct: 365 aactcgaggcagggcacccacttggagcggatc-aggtagtctacctgctttaggagggc 307
Query: 556 ctncgtgctgagtggtggcaag 577
|| ||| ||| |||||||||
Sbjct: 306 ctctgtggagaggggtggcaag 285
>dbj| AB020939.1 | Triticum timopheevii subsp. armeniacum DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Ara-A
Length = 604
Score = 387 bits (195), Expect = e-104
Identities = 291/322 (90%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 484 ctgagcacctgcgtggcgtcggtgcacccgaacataggcagcttccacatagtccagtat 425
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| |||||||| || || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 424 cggccgtcgtagtatccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 365
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||||||||
Sbjct: 364 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgcttcaggagggc 306
Query: 556 ctncgtgctgagtggtggcaag 577
|| |||| ||| |||||||||
Sbjct: 305 ctccgtggagaggggtggcaag 284
>dbj| AB020957.1 | Triticum aestivum DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
CS-B1
Length = 787
Score = 373 bits (188), Expect = e-100
Identities = 278/307 (90%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 atcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| |||||||||||||| || ||||||||
Sbjct: 547 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgtttcaggagggc 489
Query: 556 ctncgtg 562
|| ||||
Sbjct: 488 ctccgtg 482
>dbj| AB020956.1 | Triticum turgidum subsp. dicoccoides DNA for
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit, partial cds, clone Dic-B
Length = 787
Score = 373 bits (188), Expect = e-100
Identities = 278/307 (90%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| | |||||||||||||||||||||||||||| |||| ||||
Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctggcgcaggttg 728
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 667 ttcagcacctgtgtggcgtcagtgcacccgaacataggcagcttccacattgtccagtat 608
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| ||||||||||| || || ||||||||||||||||| ||| ||||||||||||
Sbjct: 607 cggccgtcgtagtacccgggggagctgttgtgctcacggaagacgaagccaaccttgctg 548
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| ||||||||||| ||||||||| |||||||||||||| || ||||||||
Sbjct: 547 aactcgaggcagggcacccactttgagcggatc-aggtagtcgacctgtttcaggagggc 489
Query: 556 ctncgtg 562
|| ||||
Sbjct: 488 ctccgtg 482
>gb| AF192776.1 |AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 371 bits (187), Expect = 2e-99
Identities = 277/303 (91%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>dbj| AB020942.1 | Secale cereale DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Sec-A
Length = 591
Score = 371 bits (187), Expect = 2e-99
Identities = 289/322 (89%), Gaps = 1/322 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||| || |||||| | ||||||||||||||||||||||||||||| |||| ||||
Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 531 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 472
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 471 ttgagcacctgagtggcgtccgtgcagccgaacataggcagcttccacattgtccagtac 412
Query: 436 cggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttgctg 495
||||| |||||||| || || || ||||||||| ||||||| ||| ||||||||||||
Sbjct: 411 cggccgtcgtagtaaccgggggagctgttgtgctcgcggaagacgaagccaaccttgctg 352
Query: 496 aactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggc 555
||||||||||| || |||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 351 aactcgaggcagggtacccacttggagcggatc-aggtagtcgacctgcttcaagagggc 293
Query: 556 ctncgtgctgagtggtggcaag 577
| |||| ||| |||||||||
Sbjct: 292 ttccgtggagaggggtggcaag 271
>dbj| AB020947.1 | Aegilops speltoides DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Spe2-B
Length = 738
Score = 367 bits (185), Expect = 3e-98
Identities = 263/288 (91%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 290 tgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggt 349
|||||||||||||||| |||| |||||| || ||||||| |||||||| ||||||||||
Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679
Query: 350 actccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaaca 409
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 678 actccttcttgacctcctccacctcgctgagcacctgtgtggcgtcggtgcacccgaaca 619
Query: 410 taggcagcttccacattgtccagtaccggccatcgtagtacccaggagatgcgttgtgct 469
||||||||||||||||||||||||| ||||| ||||||||||| || || ||||||||
Sbjct: 618 taggcagcttccacattgtccagtatcggccgtcgtagtacccgggggagctgttgtgct 559
Query: 470 cacggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatca 529
||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 558 cacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatc- 500
Query: 530 aggtagtcgacctgcttaaggagggcctncgtgctgagtggtggcaag 577
||||||||||||||||| |||||||||| |||| ||| |||||||||
Sbjct: 499 aggtagtcgacctgcttcaggagggcctccgtggagaggggtggcaag 452
>gb| AF192779.1 |AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 365 bits (184), Expect = 1e-97
Identities = 274/300 (91%), Gaps = 3/300 (1%)
Strand = Plus / Minus
Query: 259 tcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcg 318
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcg 435
Query: 319 aatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttg 378
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 434 aagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctccttg 375
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |
Sbjct: 374 atcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtacctg 315
Query: 439 ccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgctgaa 497
|| |||||||| || |||| ||| | |||||| ||||||||||| ||||||||||||||
Sbjct: 314 ccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgctgaa 256
Query: 498 ctcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggagggcct 557
||| ||||| || |||||||||||||||||||| | |||||| |||||| ||||||||||
Sbjct: 255 ctccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggagggcct 197
>gb| AF192773.1 |AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 363 bits (183), Expect = 4e-97
Identities = 276/303 (91%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | || ||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtactcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF104249.1 |AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 363 bits (183), Expect = 4e-97
Identities = 276/303 (91%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcaacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
||||||||||||||| |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcaaggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF202646.1 |AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 586
Score = 359 bits (181), Expect = 7e-96
Identities = 280/309 (90%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 250 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 309
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526
Query: 310 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 369
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctcc 466
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
||||| |||| |||||||| |||||||||||| |||||||| |||| |||||||||||||
Sbjct: 465 acctccttgatcacctgtgaggcgtcggtgcacccgaacatgggcaacttccacattgtc 406
Query: 430 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 488
||||||| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||
Sbjct: 405 cagtacctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaac 347
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaa 548
|||||||||||| ||||| || |||||||||||||||||||| | |||||| |||||| |
Sbjct: 346 cttgctgaactcaaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttta 288
Query: 549 ggagggcct 557
|||||||||
Sbjct: 287 ggagggcct 279
>gb| AF104250.1 |AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 355 bits (179), Expect = 1e-94
Identities = 275/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||||||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF096617.1 |AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
carboxylase small subunit (rbcS) mRNA, partial cds
Length = 504
Score = 355 bits (179), Expect = 1e-94
Identities = 275/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||| | ||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 377 ttgatcacctgggaggcgtcggtgcatccgaacatggggagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| || ||||| ||||||| ||| | |||||| ||||||||||| ||| | | |||
Sbjct: 317 ctgccgtcatagtatccaggag-tgctgccgtgctcgcggaagatgaagccaccttggct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
||||||||||||||| |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcaaggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF202648.1 |AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) gene, partial cds
Length = 620
Score = 351 bits (177), Expect = 2e-93
Identities = 279/309 (90%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 250 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 309
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560
Query: 310 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 369
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 500
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
||||| |||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||
Sbjct: 499 acctccttgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtc 440
Query: 430 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 488
||||||| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||
Sbjct: 439 cagtacctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaac 381
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaa 548
|||||||||||||||||| || |||||||||||||||||||| | |||||| |||||| |
Sbjct: 380 cttgctgaactcgaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttca 322
Query: 549 ggagggcct 557
|||||||||
Sbjct: 321 ggagggcct 313
>gb| AF202645.1 |AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 600
Score = 347 bits (175), Expect = 3e-92
Identities = 274/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 474
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 473 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 414
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||||||||
Sbjct: 413 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaaccttgct 355
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||||||||| || |||||||||||||||||||| | |||||| ||| || |||||||
Sbjct: 354 gaactcgaggcagggaacccacttggagcggatcaa-gaagtcgatctgtttcaggaggg 296
Query: 555 cct 557
|||
Sbjct: 295 cct 293
>gb| AF192780.1 |AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 347 bits (175), Expect = 3e-92
Identities = 274/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
||| |||||||| |||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ctgatcacctgtgaggcgtcagtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||||||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcgaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF192778.1 |AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate
carboxylase small subunit (rbcS) mRNA, nuclear gene
encoding chloroplast protein, partial cds
Length = 504
Score = 347 bits (175), Expect = 3e-92
Identities = 274/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactctttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| || ||||| ||||||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcatagtatccaggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF097359.1 |AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 347 bits (175), Expect = 3e-92
Identities = 274/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
|||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| |||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatcacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | | |||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaattcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>dbj| AB020945.1 | Avena sativa DNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds, clone
Ave-A
Length = 590
Score = 347 bits (175), Expect = 3e-92
Identities = 274/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttcacctcctccacctcc 471
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||| | |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 470 ttgatgacctgggaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 411
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||||||||||||||| || ||||||||
Sbjct: 410 ctgccgtcgtagtatccgggag-tgctgccgtgctcacggaagatgaagcccaccttgct 352
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||| ||| |||||| |||||| | |||||
Sbjct: 351 gaactccaggcagggaacccacttggagcggatc-aggaagtcgatctgcttcaagaggg 293
Query: 555 cct 557
|||
Sbjct: 292 cct 290
>gb| AF202647.1 |AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) gene, partial cds
Length = 593
Score = 343 bits (173), Expect = 4e-91
Identities = 278/309 (89%), Gaps = 3/309 (0%)
Strand = Plus / Minus
Query: 250 ccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgc 309
||||| ||||||||||||||||||||||| ||||||||||||||||||||||| || ||
Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533
Query: 310 atgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctcc 369
||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 473
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
||||| |||| |||||||| ||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 472 acctccttgatcacctgtgaggcatcagtgcagccgaacatgggcagcttccacattgtc 413
Query: 430 cagtaccggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaac 488
||||||| |||||||||||| || |||| ||| | |||||| ||||||||||| |||||
Sbjct: 412 cagtacctgccatcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaac 354
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaa 548
|||||||||||||||||| || |||||||||||||||||||| | |||| | |||||| |
Sbjct: 353 cttgctgaactcgaggcagggaacccacttggagcggatcaa-gaagtcaatctgcttca 295
Query: 549 ggagggcct 557
|||||||||
Sbjct: 294 ggagggcct 286
>gb| AF192775.1 |AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 339 bits (171), Expect = 6e-90
Identities = 273/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF192774.1 |AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase
small subunit (rbcS) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 504
Score = 339 bits (171), Expect = 6e-90
Identities = 273/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF097361.1 |AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 339 bits (171), Expect = 6e-90
Identities = 273/303 (90%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcacccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || || | ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcaaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF200303.1 |AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) gene, nuclear gene encoding chloroplast protein,
partial cds
Length = 594
Score = 331 bits (167), Expect = 1e-87
Identities = 272/303 (89%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 468
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||||| |||||| ||||| |||||||| |||| |||||||||||||||||||
Sbjct: 467 ttgatgacctgtgaggcgtctgtgcagccgaacatgggcaacttccacattgtccagtac 408
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || || | ||| | |||| | ||||||||||| |||||||||||
Sbjct: 407 ctgccgtcgtagtatcc-gggggtgctgccgtgcacgcggaagatgaagccaaccttgct 349
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 348 gaactcaaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 290
Query: 555 cct 557
|||
Sbjct: 289 cct 287
>gb| AF097360.1 |AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, nuclear gene encoding chloroplast protein,
partial cds
Length = 504
Score = 331 bits (167), Expect = 1e-87
Identities = 272/303 (89%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
|||| ||||||||||| ||||| ||||||||||||| ||||||||| |||||||||||
Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacgtcctccacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||||| |||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgtgaggcgtcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || |||| ||| | |||||| ||||||||||| |||||||||||
Sbjct: 317 ctgccgtcgtagtatccgggag-tgctgccgtgctcgcggaagatgaagccaaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>gb| AF192777.1 |AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, nuclear gene encoding chloroplast
protein, partial cds
Length = 504
Score = 315 bits (159), Expect = 9e-83
Identities = 270/303 (89%), Gaps = 3/303 (0%)
Strand = Plus / Minus
Query: 256 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttg 315
||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438
Query: 316 tcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 375
||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctctacctcc 378
Query: 376 ttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtac 435
|||| ||||| | ||| |||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 377 ttgatgacctgcgaggcatcggtgcagccgaacatgggcagcttccacattgtccagtac 318
Query: 436 cggccatcgtagtacccaggagatgc-gttgtgctcacggaagatgaacccaaccttgct 494
| ||| |||||||| || || | ||| | |||||| ||||||||||| || ||||||||
Sbjct: 317 ctgccgtcgtagtatcc-gggggtgctgccgtgctcgcggaagatgaagcccaccttgct 259
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggaggg 554
|||||| ||||| || |||||||||||||||||||| | |||||| |||||| |||||||
Sbjct: 258 gaactcaaggcagggaacccacttggagcggatcaa-gaagtcgatctgcttcaggaggg 200
Query: 555 cct 557
|||
Sbjct: 199 cct 197
>dbj| AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079842
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 10079843 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079902
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 10079903 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079962
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 10079963 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10080022
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 10080023 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 10080081
Query: 553 g 553
|
Sbjct: 10080082 g 10080082
Score = 224 bits (113), Expect = 2e-55
Identities = 230/269 (85%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11262239
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 11262238 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11262179
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 11262178 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11262119
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 11262118 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11262059
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 11262058 ctgaactcgaggcaaggcacccacttgga 11262030
Score = 210 bits (106), Expect = 4e-51
Identities = 235/278 (84%)
Strand = Plus / Minus
Query: 249 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 308
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276906
Query: 309 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 368
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 11276905 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276846
Query: 369 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 428
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 11276845 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276786
Query: 429 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 488
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 11276785 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276726
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcgga 526
||| || |||||||||||||||||||| ||||| ||||
Sbjct: 11276725 cttactaaactcgaggcaaggcacccatttggaccgga 11276688
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11320049
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 11320048 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319989
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 11319988 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319929
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 11319928 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319869
Query: 493 ctgaactcgaggcaaggcacccactt 518
|||||||| | |||||||||||||||
Sbjct: 11319868 ctgaactccaagcaaggcacccactt 11319843
Score = 75.8 bits (38), Expect = 1e-10
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 353 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 412
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 11266809 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 11266750
Query: 413 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 458
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 11266749 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 11266704
>dbj| AK121444.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full
insert sequence
Length = 984
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 666
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 665 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 606
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 605 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 546
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 545 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 486
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 485 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 427
Query: 553 g 553
|
Sbjct: 426 g 426
>dbj| AK119219.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full
insert sequence
Length = 828
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 512
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 511 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 452
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 451 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 392
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 391 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 332
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 331 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 273
Query: 553 g 553
|
Sbjct: 272 g 272
>dbj| AK070556.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full
insert sequence
Length = 2409
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 513
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 512 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 453
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 452 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 393
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 392 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 333
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 332 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 274
Query: 553 g 553
|
Sbjct: 273 g 273
>dbj| AK061611.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full
insert sequence
Length = 830
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 515
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 514 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 455
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 454 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 395
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 394 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 335
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 334 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 276
Query: 553 g 553
|
Sbjct: 275 g 275
>gb| DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079727
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 10079728 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079787
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 10079788 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 10079847
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 10079848 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 10079907
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 10079908 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 10079966
Query: 553 g 553
|
Sbjct: 10079967 g 10079967
Score = 224 bits (113), Expect = 2e-55
Identities = 230/269 (85%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11261910
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 11261909 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11261850
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 11261849 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 11261790
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 11261789 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 11261730
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 11261729 ctgaactcgaggcaaggcacccacttgga 11261701
Score = 210 bits (106), Expect = 4e-51
Identities = 235/278 (84%)
Strand = Plus / Minus
Query: 249 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 308
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276577
Query: 309 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 368
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 11276576 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276517
Query: 369 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 428
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 11276516 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 11276457
Query: 429 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 488
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 11276456 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 11276397
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcgga 526
||| || |||||||||||||||||||| ||||| ||||
Sbjct: 11276396 cttactaaactcgaggcaaggcacccatttggaccgga 11276359
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11319720
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 11319719 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319660
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 11319659 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 11319600
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 11319599 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 11319540
Query: 493 ctgaactcgaggcaaggcacccactt 518
|||||||| | |||||||||||||||
Sbjct: 11319539 ctgaactccaagcaaggcacccactt 11319514
Score = 75.8 bits (38), Expect = 1e-10
Identities = 89/106 (83%)
Strand = Plus / Minus
Query: 353 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 412
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 11266480 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 11266421
Query: 413 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 458
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 11266420 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 11266375
>emb| AL731739.4 |CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 145890
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 82779
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 82778 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 82719
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 82718 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 82659
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 82658 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 82599
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 82598 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 82540
Query: 553 g 553
|
Sbjct: 82539 g 82539
>dbj| D00643.1 |RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
of ribulose-1,5-bisphosphate carboxylase, complete cds,
clone pOSSS1139
Length = 830
Score = 232 bits (117), Expect = 1e-57
Identities = 256/301 (85%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 510
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 509 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 450
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 449 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 390
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 389 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacgaatccgaccttg 330
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 329 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 271
Query: 553 g 553
|
Sbjct: 270 g 270
>gb| AY445627.1 | Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit mRNA, complete cds;
chloroplast
Length = 860
Score = 224 bits (113), Expect = 2e-55
Identities = 230/269 (85%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 507
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 506 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 447
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 446 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 387
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 386 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 327
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 326 ctgaactcgaggcaaggcacccacttgga 298
>dbj| AK068555.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full
insert sequence
Length = 899
Score = 224 bits (113), Expect = 2e-55
Identities = 230/269 (85%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 524
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 523 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 464
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 463 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 404
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 403 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 344
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 343 ctgaactcgaggcaaggcacccacttgga 315
>emb| BX119951.3 |CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 127267
Score = 224 bits (113), Expect = 2e-55
Identities = 230/269 (85%)
Strand = Plus / Plus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 109815
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||||| | || || ||||| |||||||| ||||||| | |
Sbjct: 109816 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 109875
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 109876 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 109935
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||||||| ||| ||| |||||||||
Sbjct: 109936 tacctgccatcgtagtacccgggagacctgtggttctcacggtagacgaatccaaccttg 109995
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 109996 ctgaactcgaggcaaggcacccacttgga 110024
Score = 210 bits (106), Expect = 4e-51
Identities = 235/278 (84%)
Strand = Plus / Plus
Query: 249 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 308
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 95148
Query: 309 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 368
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 95149 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 95208
Query: 369 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 428
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 95209 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 95268
Query: 429 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 488
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 95269 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 95328
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcgga 526
||| || |||||||||||||||||||| ||||| ||||
Sbjct: 95329 cttactaaactcgaggcaaggcacccatttggaccgga 95366
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Plus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 52005
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 52006 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 52065
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 52066 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 52125
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 52126 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 52185
Query: 493 ctgaactcgaggcaaggcacccactt 518
|||||||| | |||||||||||||||
Sbjct: 52186 ctgaactccaagcaaggcacccactt 52211
Score = 75.8 bits (38), Expect = 1e-10
Identities = 89/106 (83%)
Strand = Plus / Plus
Query: 353 ccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacatag 412
|||||||| ||||||| | ||| |||| |||||| || |||| |||| |||||||| |
Sbjct: 105245 ccttcttggcctcctcgagctccttgatcacctggctgttgtcgctgcagccgaacatgg 105304
Query: 413 gcagcttccacattgtccagtaccggccatcgtagtacccaggaga 458
|||| ||||| || |||||||||| |||||| ||||||||||||||
Sbjct: 105305 gcagtttccatatggtccagtacctgccatcatagtacccaggaga 105350
>gb| L22155.1 |RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate
carboxylase/oxygenase (rbcS) mRNA, complete cds
Length = 808
Score = 224 bits (113), Expect = 2e-55
Identities = 255/301 (84%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctaacg 490
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 489 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 430
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||
Sbjct: 429 tccttgagcacctgggtggcgtcggtgcacccgaacatgggcagcttccacatggtccag 370
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||| |||||||| ||||| || || || ||||||| ||| || || ||||||
Sbjct: 369 tacctgccgtcgtagtatccaggggacttgtggttctcacggtagacaaatccgaccttg 310
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 309 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 251
Query: 553 g 553
|
Sbjct: 250 g 250
>dbj| AK099574.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full
insert sequence
Length = 947
Score = 210 bits (106), Expect = 4e-51
Identities = 235/278 (84%)
Strand = Plus / Minus
Query: 249 gccggactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacg 308
||||||||||||||| || || |||||| ||||||||||||| | |||||||||| |
Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 528
Query: 309 catgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctc 368
| ||||||||| ||||||||||| ||| | || || || || |||||||| |||||||
Sbjct: 527 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 468
Query: 369 cacctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgt 428
| ||| ||||||||||| ||||| || ||||||||||||||||||||||||||||| ||
Sbjct: 467 gagctccttgagcacctgggtggcatcagtgcatccgaacataggcagcttccacatggt 408
Query: 429 ccagtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaac 488
|||||||| |||||| |||||||||||||| || || ||||||| ||| |||||| ||
Sbjct: 407 ccagtacctgccatcatagtacccaggagacctgtggttctcacggtagacgaacccgac 348
Query: 489 cttgctgaactcgaggcaaggcacccacttggagcgga 526
||| || |||||||||||||||||||| ||||| ||||
Sbjct: 347 cttactaaactcgaggcaaggcacccatttggaccgga 310
>gb| AF017364.1 |AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 854
Score = 210 bits (106), Expect = 4e-51
Identities = 232/274 (84%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||| |||||||| || |||||| ||||||||||||||| | ||||||||| | | |
Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 538
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||||| |||||||| ||||||| | |
Sbjct: 537 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 478
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 477 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 418
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| |||||||||||| || || ||| || || ||||||| ||| || || ||||||
Sbjct: 417 tacctgccatcgtagtatccgggggatctgtggttctcacggtagacaaatccgaccttg 358
Query: 493 ctgaactcgaggcaaggcacccacttggagcgga 526
|||||||||||||| |||||||||||||| ||||
Sbjct: 357 ctgaactcgaggcagggcacccacttggaacgga 324
>gb| AF052305.1 |AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 835
Score = 208 bits (105), Expect = 1e-50
Identities = 253/301 (84%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
|||||||||||||| || |||||| |||||||||| |||| | ||||||||| | | |
Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgcctgacg 501
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| ||||| | || ||||||| | |||||||| ||||||| | |
Sbjct: 500 ttgtcgaagccgatgatacggacgaatgcatcagggttcgccttcttggcctcctcgagc 441
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 440 tccttgagcacctgggtggcgtcagtgcacccgaacatgggcagcttccacatggtccag 381
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||| || || || ||| || || ||||||| ||| ||| || ||||||
Sbjct: 380 tacctgccatcgtaatatccgggggatctgtggttctcacggtagacgaatccgaccttg 321
Query: 493 ctgaactcgaggcaaggcacccacttggagcggatcaaggtagtcgacctgcttaaggag 552
|||||||||||||| |||||||||||||| |||| | ||||| |||| |||||| |||||
Sbjct: 320 ctgaactcgaggcagggcacccacttggaacggagc-aggtactcgatctgcttcaggag 262
Query: 553 g 553
|
Sbjct: 261 g 261
>dbj| D00644.1 |RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit
of ribulose-1,5-bisphosphate carboxylase, complete cds,
clone pOSSS2106
Length = 895
Score = 208 bits (105), Expect = 1e-50
Identities = 228/269 (84%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| ||||| |||||| ||||||||||||| | |||||||||| | | |
Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 522
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
|||||||| |||||||| |||| | | || || ||||| |||||||| ||||||| | |
Sbjct: 521 ttgtcgaagccgatgatacggataaaggcatcggggtaggccttcttggcctcctcgagc 462
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 461 tccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtccaa 402
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| ||||||||||||||| ||||| || || ||| ||| ||| ||| |||||||||
Sbjct: 401 tacctgccatcgtagtacccgggagacctgtggttctcgcggtagacgaatccaaccttg 342
Query: 493 ctgaactcgaggcaaggcacccacttgga 521
|||||||||||||||||||||||||||||
Sbjct: 341 ctgaactcgaggcaaggcacccacttgga 313
>emb| X07515.1 |OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit (EC 4.1.1.39)
Length = 1110
Score = 174 bits (88), Expect = 2e-40
Identities = 230/276 (83%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
||||||||||||||| | ||||||||| | | ||||||||| |||||||| |||||
Sbjct: 836 aggcgatgaagctgatgagctgcacctgcctaacgttgtcgaagccgatgatacggacga 777
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || ||||||||| |||||||| ||||||| | ||| |||| ||||| ||||||||||
Sbjct: 776 atgcatcagggtacgccttcttggcctcctcgagctccttgacgacctgggtggcgtcgg 717
Query: 398 tgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggag 457
|||| |||||||| |||||||||||||| |||||||||| ||| |||||||| ||||| |
Sbjct: 716 tgcacccgaacatgggcagcttccacatggtccagtacctgccgtcgtagtatccagggg 657
Query: 458 atgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcacccact 517
| || || ||||||| ||| || || |||||||||||||||||||| |||| |||||
Sbjct: 656 acttgtggttctcacggtagacaaatccgaccttgctgaactcgaggcagggca-ccact 598
Query: 518 tggagcggatcaaggtagtcgacctgcttaaggagg 553
|||| |||| | ||||| |||| |||||| ||||||
Sbjct: 597 tggaacggagctaggtactcgatctgcttcaggagg 562
>gb| AF017363.1 |AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 918
Score = 170 bits (86), Expect = 3e-39
Identities = 179/210 (85%)
Strand = Plus / Minus
Query: 312 gttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccac 371
||||||||| |||||||| |||||| | || |||||||| |||||||| | || || |
Sbjct: 508 gttgtcgaagccgatgatacggacaaaggcatcagggtaggccttcttggcatcttcgag 449
Query: 372 ctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtcca 431
|| ||||||||||| ||||| |||||||| |||||||| |||||||||||||| |||||
Sbjct: 448 ttccttgagcacctgggtggcatcggtgcagccgaacatgggcagcttccacatggtcca 389
Query: 432 gtaccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaacctt 491
|||| |||||||||||| || ||||| || || ||||||| ||| ||||||||||||
Sbjct: 388 atacctgccatcgtagtatccgggagacctgtggttctcacggtagacgaacccaacctt 329
Query: 492 gctgaactcgaggcaaggcacccacttgga 521
|||||||||||| |||||||||||||||||
Sbjct: 328 gctgaactcgagacaaggcacccacttgga 299
>gb| AF008214.1 |AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS1) mRNA, complete cds
Length = 853
Score = 139 bits (70), Expect = 1e-29
Identities = 154/182 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| |||| |||||||||||| || |||||||||| |||||||||
Sbjct: 598 ggcttgtaggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatg 539
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | |||| ||||||||||||||| |||||||||||| || ||||||
Sbjct: 538 cggatgaaggcgtgggggtactccttcttgcactcctccacctccttcgccacctgcaca 479
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 478 gcgtcggtgcacccgaacatgggcagcttccacatggtccagtaccgcccgtcgtagtac 419
Query: 451 cc 452
||
Sbjct: 418 cc 417
>emb| X00137.1 |LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit
(cDNA clone pLg ssu1)
Length = 776
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 530 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 471
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 470 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 411
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||||
Sbjct: 410 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtac 351
Query: 451 ccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggc 510
|| || || ||||||| ||||||| | | |||||| ||||| |||||||| ||| ||
Sbjct: 350 ccgggcgacgcgttgttctcacggtacacgaacccctccttggagaactcgatgcaggga 291
Query: 511 accca 515
|||||
Sbjct: 290 accca 286
>emb| X17235.1 |LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 764
Score = 137 bits (69), Expect = 5e-29
Identities = 201/245 (82%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 515 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 456
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 455 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 396
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| |||||||||| || |||||||||
Sbjct: 395 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtacctcccgtcgtagtac 336
Query: 451 ccaggagatgcgttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggc 510
|| || || ||||||| ||||||| | | |||||| ||||| |||||||| ||| ||
Sbjct: 335 ccgggcgacgcgttgttctcacggtacacgaacccctccttggagaactcgatgcaggga 276
Query: 511 accca 515
|||||
Sbjct: 275 accca 271
>emb| X17234.1 |LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 791
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 609 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 550
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 549 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 490
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 489 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 430
Query: 451 cc 452
||
Sbjct: 429 cc 428
>emb| X17233.1 |LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 791
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 607 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 548
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 547 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 488
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 487 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 428
Query: 451 cc 452
||
Sbjct: 427 cc 426
>emb| X17231.1 |LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 800
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 628 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 569
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 568 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 509
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 508 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 449
Query: 451 cc 452
||
Sbjct: 448 cc 447
>emb| X17230.1 |LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 858
Score = 131 bits (66), Expect = 3e-27
Identities = 153/182 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 604 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 545
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 544 ctgacgaaatactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 485
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||||||||||||| ||||||||||| || |||||||||
Sbjct: 484 gcgtcggtgcagccgaacatgggcagcttccacatcgtccagtaccgcccgtcgtagtac 425
Query: 451 cc 452
||
Sbjct: 424 cc 423
>emb| AJ428877.1 |ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate
carboxylase small subunit percursor (rbcs gene)
Length = 686
Score = 123 bits (62), Expect = 7e-25
Identities = 140/166 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||||||||||||| ||||| | ||||||||||||||| |||
Sbjct: 581 ggcttgtaggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatg 522
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||||| | || | ||||| ||||||| ||||||| | |||| || ||||| |||
Sbjct: 521 cggacgaaagcatgtgggtaagccttcttagcctcctcgagctcggcgacaacctgggtg 462
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 436
||||| ||||| |||||||| |||||||||||||| ||||||||||
Sbjct: 461 gcgtcagtgcacccgaacatgggcagcttccacatggtccagtacc 416
>gb| AY693395.1 | Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit
(rbcS) mRNA, partial cds
Length = 195
Score = 121 bits (61), Expect = 3e-24
Identities = 145/169 (85%), Gaps = 3/169 (1%)
Strand = Plus / Minus
Query: 390 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||| ||||| |||||||| ||||||||||||||||||||||||| ||| ||||||||
Sbjct: 195 ggcgtcagtgcagccgaacatgggcagcttccacattgtccagtacctgccgtcgtagta 136
Query: 450 cccaggagatgc-gttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaag 508
|| |||| ||| | | ||||||||||||||| ||||||||||||||||| | ||| |
Sbjct: 135 tccgggag-tgctgccgaactcacggaagatgaagccaaccttgctgaactccaagcagg 77
Query: 509 gcacccacttggagcggatcaaggtagtcgacctgcttaaggagggcct 557
| ||||| |||||||||||||| |||||| |||||| ||||||||||
Sbjct: 76 gaacccatttggagcggatcaa-aaagtcgatctgcttcaggagggcct 29
>emb| X17232.1 |LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose
bisphosphate carboxylase (EC 4.1.1.39)
Length = 936
Score = 115 bits (58), Expect = 2e-22
Identities = 151/182 (82%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| |||||| || || ||| |||||||||| ||||||||
Sbjct: 585 ggcttgtaggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgatt 526
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || ||||| |||||||| |||||||||||||| || |||||| ||
Sbjct: 525 ctgacgaagtactcggggtaggccttcttggcctcctccacctcggcgatcacctggctg 466
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
||||||||||| |||||||| |||| ||||||||| |||||||||| || |||||||||
Sbjct: 465 gcgtcggtgcagccgaacatgggcaacttccacatcgtccagtacctcccgtcgtagtac 406
Query: 451 cc 452
||
Sbjct: 405 cc 404
>dbj| AK070257.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full
insert sequence
Length = 845
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 520
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 519 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 460
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 459 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 400
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 399 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 340
Query: 493 ctgaactcgaggcaaggcacccactt 518
|||||||| | |||||||||||||||
Sbjct: 339 ctgaactccaagcaaggcacccactt 314
>dbj| AK068266.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full
insert sequence
Length = 1999
Score = 115 bits (58), Expect = 2e-22
Identities = 214/266 (80%)
Strand = Plus / Minus
Query: 253 gactcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatg 312
||||||||||| || |||||||| | ||||||||||||| |||||||||| | | |
Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 522
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||| || || |||||||| || | || |||||||| ||||||| ||||||| | |
Sbjct: 521 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 462
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 461 tccttgagcacttgggtggcatcggtgcatccaaacatgggcagtttccacatggtccag 402
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctcacggaagatgaacccaaccttg 492
|||| || || ||||| || || ||| || | ||||||| ||| ||| || ||||||
Sbjct: 401 tacctaccgtcatagtatccgggtgatctgtgattctcacggtagacgaatccgaccttg 342
Query: 493 ctgaactcgaggcaaggcacccactt 518
|||||||| | |||||||||||||||
Sbjct: 341 ctgaactccaagcaaggcacccactt 316
>gb| L24497.1 |PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small
subunit (rbcS) mRNA, complete cds
Length = 813
Score = 101 bits (51), Expect = 2e-18
Identities = 171/211 (81%)
Strand = Plus / Minus
Query: 264 gcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatcc 323
|||||| |||||| | |||||||| |||| ||||||||| ||||| | |||||||||||
Sbjct: 559 gcctggaggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatcc 500
Query: 324 gatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcac 383
|||||| |||| | | | ||||| |||||||| |||| |||| ||| || | |||
Sbjct: 499 gatgatacggatgaaggattgggggtaggccttcttggcctcttccagctctttcaacac 440
Query: 384 ctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatc 443
||| | | |||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 439 ctgggaagagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatc 380
Query: 444 gtagtacccaggagatgcgttgtgctcacgg 474
||||| || || ||| ||||| |||||||
Sbjct: 379 atagtatcctggggatctgttgttctcacgg 349
>gb| L10212.1 |CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit
gene, complete cds
Length = 3552
Score = 101 bits (51), Expect = 2e-18
Identities = 147/179 (82%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| |||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 2527 ggcttgtaggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgata 2468
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| || |||||| |
Sbjct: 2467 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcgaccacctgggat 2408
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 2407 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2349
>dbj| AB236868.1 | Panax ginseng mRNA for ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds
Length = 790
Score = 97.6 bits (49), Expect = 4e-17
Identities = 151/185 (81%)
Strand = Plus / Minus
Query: 268 ggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatg 327
|||||||||||||| ||||| |||| ||||||||| ||||| | |||||||||||| ||
Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcgaatccaata 517
Query: 328 atgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgt 387
|| |||| || || | ||||||||||||||| |||||| || || || | ||||||
Sbjct: 516 attcggatgtatgcatttgggtactccttcttgcactcctctacttctttcaacacctga 457
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
| | || |||||||| ||||| ||||||||||||||||||||||| || || || |||
Sbjct: 456 gatgaatcagtgcatccaaacatgggcagcttccacattgtccagtaacgtccgtcatag 397
Query: 448 taccc 452
|||||
Sbjct: 396 taccc 392
>gb| AF039015.1 |AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 483
>gb| AF039013.1 |AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 483
>gb| AF039009.1 |AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtaccgtccatcgtagtacccaggagat 483
>gb| AF024574.1 |AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type III (rbcS3) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 798
Score = 97.6 bits (49), Expect = 4e-17
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 419 ccgaacatgggcagcttccacattgtccagtaccgcccatcgtagtacccaggagat 363
>gb| BC038257.1 | Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds
Length = 763
Score = 95.6 bits (48), Expect = 2e-16
Identities = 165/204 (80%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| || | ||| ||||| ||||| |||||||||| || |||||
Sbjct: 582 ggcttgtaggcaatgaaactaatgcattgcacttgacgtttgttgtcgaacccaatgatc 523
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| ||| | || |||||||| |||||||||||||||| ||||| || | |||||| |
Sbjct: 522 ctaacaaaagcatcagggtaagccttcttgacctcctcaacctcattcaccacctgagct 463
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
| ||| ||||| ||||||||||||| ||||||||| |||||||| || ||||| |||||
Sbjct: 462 gggtcagtgcacccgaacataggcaacttccacatagtccagtagcgaccatcatagtat 403
Query: 451 ccaggagatgcgttgtgctcacgg 474
|| || ||| |||||||||||||
Sbjct: 402 cctggcgatttgttgtgctcacgg 379
>emb| Y09214.1 |ZMRUBSMSU Z.mays rubisco small subunit gene
Length = 1274
Score = 95.6 bits (48), Expect = 2e-16
Identities = 156/192 (81%)
Strand = Plus / Minus
Query: 258 ctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtc 317
||||| ||| || |||||| ||||||||||||||||||||||| ||| | | ||||||
Sbjct: 823 ctcgctgccggggggcttgtaggcgatgaagctgacgcactgcgtctgcctgacgttgtc 764
Query: 318 gaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgtt 377
||| ||||||| |||| | ||||| |||||| | || |||||| || ||| ||
Sbjct: 763 gaagccgatgacgcggtggaaggcgtccgggtacgcggcgatggcctcctgcagctcctt 704
Query: 378 gagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccg 437
| |||||| |||||||||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 703 gtacacctgcgtggcgtcggtgcagccgaacatgggcagcttccacatggtccagtagcg 644
Query: 438 gccatcgtagta 449
||| ||||||||
Sbjct: 643 gccgtcgtagta 632
>dbj| D00572.1 |PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete
cds
Length = 844
Score = 93.7 bits (47), Expect = 6e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 584 ggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgata 525
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | | | ||||| |||||||| |||| |||| ||| || | |||||| |
Sbjct: 524 cggatgaaggactgggggtaagccttcttggcctcttccagctccttcaacacctgggaa 465
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 464 gagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatcatagta 406
>emb| X65494.1 |MSCARB Malus (unidentified species of crab apple) mRNA for
rubisco-1,5-bisphosphate carboxylase
Length = 853
Score = 93.7 bits (47), Expect = 6e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 588 ggcttgtaagcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgata 529
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | | | ||||| |||||||| |||| |||| ||| || | |||||| |
Sbjct: 528 cggatgaaggattgggggtaggccttcttggcctcttccagctctttcaacacctgggaa 469
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| |||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||
Sbjct: 468 gagtcggtgcatccgaacatgggcagcttccacattgtccagtaccttccatcatagta 410
>gb| M38316.1 |CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate
carboxylase/oxygenase small subunit (rbcS-2) mRNA,
complete cds
Length = 680
Score = 93.7 bits (47), Expect = 6e-16
Identities = 146/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| |||| |||||| || ||||||| ||||||||||||||||||
Sbjct: 558 ggcttgtaggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgata 499
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| | |||||| |
Sbjct: 498 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggat 439
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || ||||| |||||
Sbjct: 438 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcatagta 380
>gb| AF034479.1 | Zantedeschia aethiopica ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear
gene encoding chloroplast protein, complete cds
Length = 968
Score = 91.7 bits (46), Expect = 2e-15
Identities = 148/182 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||| || |||||||| ||||||||| || ||| |||||||||| ||||||||
Sbjct: 564 ggcttgtaggtgaggaagctgatgcactgcacttggcgcgtgttgtcgaagccgatgatc 505
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | ||| |||||| |||| || ||| |||||||| ||||||||||| | |
Sbjct: 504 cggttgaagtagtcggggtacgccttactgcactcgtccacctccttgagcacctgggag 445
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtac 450
| ||||||||| |||||||| |||| ||||||||| |||||||| || || |||||||||
Sbjct: 444 gagtcggtgcacccgaacatgggcaacttccacatggtccagtagcgcccgtcgtagtac 385
Query: 451 cc 452
||
Sbjct: 384 cc 383
>gb| AY843526.1 | Ammopiptanthus mongolicus ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit mRNA, complete cds;
chloroplast
Length = 824
Score = 89.7 bits (45), Expect = 9e-15
Identities = 156/193 (80%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
|||||||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||
Sbjct: 564 agcctggtggcttgtaggcaatgaaactgatgcactgaacttgacgtttgttgtcgaatc 505
Query: 323 cgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagca 382
| ||||| ||||| | || ||||| ||||||||| |||||| | ||| || | ||
Sbjct: 504 caatgattcggacgaaagcagtggggtattccttcttgcactcctcaagctccttcatca 445
Query: 383 cctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccat 442
|||||| || || |||| || |||||||||||||||||||| |||||||| || ||||
Sbjct: 444 cctgtgaagcatcactgcacccaaacataggcagcttccacatggtccagtagcgtccat 385
Query: 443 cgtagtacccagg 455
| ||||| |||||
Sbjct: 384 catagtatccagg 372
>gb| AF044400.1 |AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 534
Score = 89.7 bits (45), Expect = 9e-15
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 398 tgcatccgaacataggcagcttccacattgtccagta 434
|||||||||||||||||| ||||||||||||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacattgtccagta 220
>gb| AF044399.1 |AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 629
Score = 89.7 bits (45), Expect = 9e-15
Identities = 129/157 (82%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 398 tgcatccgaacataggcagcttccacattgtccagta 434
|||||||||||||||||| ||||||||||||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacattgtccagta 220
>gb| AF039012.1 |AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 89.7 bits (45), Expect = 9e-15
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttcaacattgtccagtaccgcccatcgtagtacccaggagat 483
>gb| AF039010.1 |AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 595
Score = 89.7 bits (45), Expect = 9e-15
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 539 ccgaacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 483
>gb| AF031543.1 |AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small
subunit type IV (rbcS4) mRNA, complete cds
Length = 732
Score = 89.7 bits (45), Expect = 9e-15
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 414 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 358
>gb| AF024572.1 |AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type I (rbcS1) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 713
Score = 89.7 bits (45), Expect = 9e-15
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 413 ccgaacatcggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 357
>ref| NM_202369.1 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090
transcript variant AT1G67090.2 mRNA, complete cds
Length = 871
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 549 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 490
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 489 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 430
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 429 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 370
Query: 447 gta 449
|||
Sbjct: 369 gta 367
>ref| NM_105379.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090
transcript variant AT1G67090.1 mRNA, complete cds
Length = 878
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 447 gta 449
|||
Sbjct: 376 gta 374
>gb| AC007152.9 | Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
sequence
Length = 90387
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Plus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 78183 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 78242
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 78243 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 78302
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 78303 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 78362
Query: 447 gta 449
|||
Sbjct: 78363 gta 78365
>gb| AY142543.1 | Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence
Length = 2116
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 1929 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 1870
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| | | ||| | ||||||||||||||| || || || || || | |||||| | |
Sbjct: 1869 ctaatgaaggcgcccgggtactccttcttgcattcttcaacttccttcaacacctgagcg 1810
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 1809 gagtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 1751
>gb| BT000362.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 447 gta 449
|||
Sbjct: 348 gta 346
>gb| AY097366.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 543
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 447 gta 449
|||
Sbjct: 348 gta 346
>gb| AY093380.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 447 gta 449
|||
Sbjct: 348 gta 346
>gb| AY065101.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 617
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 550 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 491
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 490 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 431
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 430 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 371
Query: 447 gta 449
|||
Sbjct: 370 gta 368
>gb| AY062711.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 772
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 447 gta 449
|||
Sbjct: 374 gta 372
>gb| AY062612.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (F5A8.1) mRNA, complete cds
Length = 750
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 447 gta 449
|||
Sbjct: 374 gta 372
>gb| AY059940.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 721
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 557 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 498
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 497 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 438
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 437 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 378
Query: 447 gta 449
|||
Sbjct: 377 gta 375
>gb| AY058831.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 788
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 554 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 495
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 494 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 435
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 434 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 375
Query: 447 gta 449
|||
Sbjct: 374 gta 372
>gb| AY054188.1 | Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds
Length = 711
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 447 gta 449
|||
Sbjct: 376 gta 374
>gb| AY054581.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090; F5A8.1) mRNA, complete cds
Length = 702
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 557 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 498
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 497 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 438
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 437 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 378
Query: 447 gta 449
|||
Sbjct: 377 gta 375
>gb| AF410291.1 |AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 752
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 447 gta 449
|||
Sbjct: 375 gta 373
>gb| AY050459.1 | Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds
Length = 3162
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 556 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 497
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 496 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 437
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 436 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 377
Query: 447 gta 449
|||
Sbjct: 376 gta 374
>gb| AC004146.1 |AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence
Length = 101933
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Plus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 2072 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 2131
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 2132 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 2191
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 2192 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 2251
Query: 447 gta 449
|||
Sbjct: 2252 gta 2254
>gb| AF325004.2 |AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete
cds
Length = 754
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 447 gta 449
|||
Sbjct: 375 gta 373
>gb| AF372874.1 |AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 632
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 379 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 320
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 319 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 260
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 259 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 200
Query: 447 gta 449
|||
Sbjct: 199 gta 197
>emb| BX814212.1 |CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB61ZA04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 735
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 534 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 475
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 474 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 415
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 414 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 355
Query: 447 gta 449
|||
Sbjct: 354 gta 352
>emb| BX818334.1 |CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 735
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 534 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 475
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 474 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 415
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 414 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 355
Query: 447 gta 449
|||
Sbjct: 354 gta 352
>emb| BX818366.1 |CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 697
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 496 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 437
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 436 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 377
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 376 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 317
Query: 447 gta 449
|||
Sbjct: 316 gta 314
>emb| BX817617.1 |CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 730
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 529 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 470
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 469 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 410
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 409 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 350
Query: 447 gta 449
|||
Sbjct: 349 gta 347
>gb| AF325011.1 |AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds
Length = 825
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 555 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 496
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 495 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 436
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 435 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 376
Query: 447 gta 449
|||
Sbjct: 375 gta 373
>emb| Y00322.1 |ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit (EC 4.1.1.39)
Length = 1648
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 1147 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 1088
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 1087 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 1028
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 1027 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 969
>emb| X13711.1 |NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate
carboxylase small subunit
Length = 2293
Score = 85.7 bits (43), Expect = 1e-13
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| || ||
Sbjct: 1980 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataat 1921
Query: 330 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 389
||||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1920 acggacccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1861
Query: 390 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 436
||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1860 ggcatcagtgcatccgaacataggtagcttccacatggtccagtacc 1814
>emb| X03821.1 |PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate
carboxylase small subunit
Length = 1314
Score = 85.7 bits (43), Expect = 1e-13
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
||||| |||||||| |||||||| |||||||||||||| |||||||||| |||||| |||
Sbjct: 1058 gtggcatcggtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 999
Query: 448 tacccaggagatgcgttgtgctcacgg 474
|||| |||||||| | || |||||||
Sbjct: 998 taccttggagatgcatggtactcacgg 972
Score = 61.9 bits (31), Expect = 2e-06
Identities = 58/67 (86%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
||||||| |||||| |||| ||||| |||| ||| ||||| ||||||| |||||||||||
Sbjct: 1183 agcctgggggcttgtaggcaatgaaactgatgcattgcacttgacgcacgttgtcgaatc 1124
Query: 323 cgatgat 329
| |||||
Sbjct: 1123 caatgat 1117
>emb| X06535.1 |ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit
(RuBPC; EC 4.1.1.39)
Length = 830
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 503
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 502 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 443
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 442 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 384
>gb| BT002076.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 85.7 bits (43), Expect = 1e-13
Identities = 148/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 447 gta 449
|||
Sbjct: 348 gta 346
>gb| AY103730.1 | Zea mays PCO095823 mRNA sequence
Length = 1172
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 682 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 623
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 622 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 563
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 562 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 504
>gb| M86717.1 |SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit gene, complete cds
Length = 2328
Score = 85.7 bits (43), Expect = 1e-13
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||
Sbjct: 1640 gcgtcggtgcagccgaacatgggcagcttccacatggtccagtaccggccgtcgtagta 1582
Score = 48.1 bits (24), Expect = 0.032
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 488 ccttgctgaactcgaggcaaggcaccca 515
||||||||||||||||||| ||||||||
Sbjct: 1543 ccttgctgaactcgaggcagggcaccca 1516
>emb| X14564.1 |ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate
carboxylase small subunit (rbcS) (EC 4.1.1.39)
Length = 9647
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 9225 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 9166
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| | | ||| | ||||||||||||||| || || ||||| || | ||| || | |
Sbjct: 9165 ctaatgaaggcgcccgggtactccttcttgcattcttcaacctccttcaacacttgagcg 9106
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 9105 gagtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 9047
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 2256 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 2200
Score = 69.9 bits (35), Expect = 9e-09
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 5526 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 5467
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 5466 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 5407
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 5406 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 5348
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
|||||| |||| ||||| |||| |||||| || ||||| |||||||||||||||||||
Sbjct: 2378 ggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgatgat 2320
>gb| M36685.1 |TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene,
complete cds
Length = 2293
Score = 85.7 bits (43), Expect = 1e-13
Identities = 136/167 (81%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| || ||
Sbjct: 1980 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaataat 1921
Query: 330 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 389
||||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1920 acggacccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1861
Query: 390 ggcgtcggtgcatccgaacataggcagcttccacattgtccagtacc 436
||| || ||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 1860 ggcatcagtgcatccgaacataggtagcttccacatggtccagtacc 1814
>gb| M38318.1 |CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate
carboxylase/oxygenase small subunit (rbcS-4) mRNA,
complete cds
Length = 747
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 551 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 492
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 491 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 432
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 431 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 373
>dbj| D00170.1 |MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small
subunit, complete cds
Length = 830
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||||||||||| ||| ||||||||||| ||||||| |
Sbjct: 562 ggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccgatgacg 503
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | ||||| ||||| || || |||||| || ||| ||| |||||| |||
Sbjct: 502 cggtggaaggcgtccgggtaggatttgatggcctcctgcagctccttgtacacctgggtg 443
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 442 gcgtcgttgcagccgaacatgggcagcttccacatggtccagtagcggccgtcgtagta 384
>gb| L10215.1 |CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small
subunit genes, complete cds, (clone: rbcs-5) rubisco
small submnit gene, partial cds
Length = 8682
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 7689 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 7630
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 7629 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 7570
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 7569 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 7511
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| ||||| ||||| || ||||||| |||||||||||| |||||
Sbjct: 3707 ggcttgtaggcgatgaaactgacacactggacttgacgcacgttgtcgaatcctatgata 3648
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 3647 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 3588
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 3587 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 3529
Score = 71.9 bits (36), Expect = 2e-09
Identities = 132/164 (80%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| |||| ||||| || ||||||| ||||||||||||||||||
Sbjct: 1341 ggcttgtaggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgata 1282
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
|||| | || |||||||| |||||||| ||||||| | ||| | ||||| |
Sbjct: 1281 cggatgaaggcctcagggtaagccttcttggcctcctcgagctcagcaacaacctgggat 1222
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagta 434
| ||| ||||| |||||||| |||| ||||||||||||||||||
Sbjct: 1221 gggtcagtgcaaccgaacatgggcaacttccacattgtccagta 1178
>gb| L10214.1 |CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit
gene, complete cds
Length = 2671
Score = 85.7 bits (43), Expect = 1e-13
Identities = 145/179 (81%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| |||| |||||| || ||||||| ||||||||||||||||||
Sbjct: 2040 ggcttgtaggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgata 1981
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||| | || |||||||| |||||||| ||||||| | ||| | |||||| |
Sbjct: 1980 cgggtgaaggcctcagggtaagccttcttggcctcctcgagctcagcaaccacctgggat 1921
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||| ||||| |||||||| |||| |||||||||||||||||| || ||||| |||||
Sbjct: 1920 gggtcagtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcatagta 1862
>gb| AF039007.1 |AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 6e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 406 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
>gb| AF039006.1 |AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 6e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 406 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
>gb| AF039005.1 |AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence
Length = 584
Score = 83.8 bits (42), Expect = 6e-13
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 406 aacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
||||| ||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 525 aacatgggcagcttccacattgtccagtagcgcccatcgtagtacccaggagat 472
>gb| M29642.1 |PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA
(clone pSSU 51), partial cds
Length = 212
Score = 83.8 bits (42), Expect = 6e-13
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
||||| || ||||| |||||||| |||||||||||||| |||||||||| |||||| |||
Sbjct: 77 gtggcatcagtgcacccgaacatgggcagcttccacatggtccagtacctgccatcatag 18
Query: 448 tacccaggagatgc 461
||||| ||||||||
Sbjct: 17 taccctggagatgc 4
>ref| NM_123204.3 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430
mRNA, complete cds
Length = 808
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 431 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 375
>ref| NM_123202.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410
transcript variant AT5G38410.1 mRNA, complete cds
Length = 925
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>ref| NM_001036904.1 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410
transcript variant AT5G38410.2 mRNA, complete cds
Length = 963
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 491 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 435
>gb| AY267351.1 | Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit (RbcS2) mRNA, complete cds
Length = 787
Score = 81.8 bits (41), Expect = 2e-12
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||||||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 555 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 496
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 495 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggctgagtcgg 436
Query: 398 tgcatccgaacataggcagcttccacattgtccagta 434
|||||||||||||||||| ||||||||||||||||||
Sbjct: 435 tgcatccgaacataggcaacttccacattgtccagta 399
>gb| AY143814.1 | Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds
Length = 546
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| BT000721.1 | Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose
bisphosphate carboxylase small chain 3b precursor
(RuBisCO small subunit 3b) (At5g38410) mRNA, complete
cds
Length = 772
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 454 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 398
>gb| AY051025.1 | Arabidopsis thaliana putative RuBisCO small 3b subunit precursor
(At5g38410) mRNA, complete cds
Length = 577
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AF360124.1 | Arabidopsis thaliana putative ribulose bisphosphate carboxylase
small chain 3b precursor (At5g38410) mRNA, complete cds
Length = 720
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>emb| X02353.1 |NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit
Length = 2362
Score = 81.8 bits (41), Expect = 2e-12
Identities = 134/165 (81%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| |||| ||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 1972 tggcttgtaggcaatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 1913
Query: 330 gcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgt 389
|||| | || | ||||| ||||||| |||| |||||||| | ||| || ||
Sbjct: 1912 acggatccaggcctgtgggtatgccttcttcgcctcttccacctcagccaacacttgggt 1853
Query: 390 ggcgtcggtgcatccgaacataggcagcttccacattgtccagta 434
||| || ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 1852 ggcatcagtgcatccgaacataggtagcttccacatggtccagta 1808
>emb| AJ843975.1 | Plantago major mRNA for Rubisco SSU (rbcs1a gene)
Length = 761
Score = 81.8 bits (41), Expect = 2e-12
Identities = 155/193 (80%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
|||||||||||||| |||| ||||| |||| |||||| || || || | ||||||||| |
Sbjct: 565 agcctggtggcttggaggcaatgaaactgatgcactggacttggcgaacgttgtcgaagc 506
Query: 323 cgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagca 382
||||||| | ||| | |||| ||||| ||||||||| |||||||| ||| | |
Sbjct: 505 cgatgatcctgacccaggcgttggggtattccttcttgcactcctccagctcagcaatga 446
Query: 383 cctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccat 442
| || |||| ||||||||||||||||| || |||||||||||||||||||| || || |
Sbjct: 445 cttggctggcatcggtgcatccgaacatgggtagcttccacattgtccagtagcgtccgt 386
Query: 443 cgtagtacccagg 455
| ||||| |||||
Sbjct: 385 catagtatccagg 373
Score = 42.1 bits (21), Expect = 2.0
Identities = 40/45 (88%), Gaps = 1/45 (2%)
Strand = Plus / Minus
Query: 495 gaactcgaggcaaggcacccacttggagcggatcaaggtagtcga 539
|||||| |||||||| | |||||||||||||| |||||||||||
Sbjct: 330 gaactcaaggcaaggaatccacttggagcgga-gaaggtagtcga 287
>gb| AY098970.1 | Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds
Length = 546
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AF462822.1 |AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds
Length = 764
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>gb| AY065026.1 | Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds
Length = 2204
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 77 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 21
>gb| AY064686.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase small chain
3b precursor (RuBisCO small subunit 3b) (At5g38410;
MXI10.13) mRNA, complete cds
Length = 595
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 346
>gb| AY054552.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase small chain
3b precursor (RuBisCO small subunit 3b) (At5g38410;
MXI10.13) mRNA, complete cds
Length = 772
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 445 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 389
>gb| AF410314.1 |AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 728
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 397
>gb| AF410283.1 |AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds
Length = 652
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 428 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 372
>gb| AF044401.1 |AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 532
Score = 81.8 bits (41), Expect = 2e-12
Identities = 128/157 (81%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||||||| ||||| ||||| | |||||||||||||||||| ||||
Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 316 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggccgagtcgg 257
Query: 398 tgcatccgaacataggcagcttccacattgtccagta 434
|||||||||||||||||| ||||||||| ||||||||
Sbjct: 256 tgcatccgaacataggcaacttccacatcgtccagta 220
>emb| BX833384.1 |CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 703
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 429 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 373
>emb| BX830381.1 |CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB77ZB07 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 717
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 411 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 355
>emb| BX830099.1 |CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB59ZG04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 372
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 135 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 79
>emb| BX832776.1 |CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 715
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 441 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 385
>emb| BX831203.1 |CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS68ZD03 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 706
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 430 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 374
>emb| BX833789.1 |CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 700
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 424 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 368
>emb| BX833660.1 |CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 716
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 440 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 384
>emb| BX832874.1 |CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 709
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 435 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 379
>gb| BT005730.1 | Arabidopsis thaliana clone RAFL15-16-B15 (R20676)
Length = 1794
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 448 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 392
>dbj| AB005248.1 | Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10
Length = 83646
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 57626 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 57682
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 50777 gtcggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 50833
Score = 69.9 bits (35), Expect = 9e-09
Identities = 143/179 (79%)
Strand = Plus / Plus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 54357 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 54416
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 54417 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 54476
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 54477 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 54535
>gb| AF039014.1 |AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 592
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 480
>gb| AF039011.1 |AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 591
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 535 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 479
>gb| AF039008.1 |AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate
carboxylase small subunit (rbcS) gene, partial cds
Length = 592
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||||||||||||||||| || ||||||||||| |||||||||
Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcgcccatcgtagtaaccaggagat 480
>gb| AF039004.1 |AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence
Length = 594
Score = 81.8 bits (41), Expect = 2e-12
Identities = 54/57 (94%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct: 538 ccgaacatgggcagcttc-acattgtccagtaccgcccatcgtagtacccaggagat 483
>gb| AF031544.1 |AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small
subunit type V (rbcS5) mRNA, complete cds
Length = 728
Score = 81.8 bits (41), Expect = 2e-12
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggagat 459
|||||||| |||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct: 441 ccgaacatgggcagcttccacatcgtccagtagcgcccatcgtagtacccaggagat 385
>gb| AF303941.1 |AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS3 mRNA, complete cds
Length = 772
Score = 79.8 bits (40), Expect = 9e-12
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 323 cgatgatgcgga 334
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 3e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 456
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 457 gatgcgttgtgctcacgg 474
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| AF303940.1 |AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS2 mRNA, complete cds
Length = 830
Score = 79.8 bits (40), Expect = 9e-12
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 323 cgatgatgcgga 334
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 3e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 456
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 457 gatgcgttgtgctcacgg 474
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| AF303939.1 |AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
rbcS1 mRNA, complete cds
Length = 750
Score = 79.8 bits (40), Expect = 9e-12
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 566 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 507
Query: 323 cgatgatgcgga 334
||||||| ||||
Sbjct: 506 cgatgatacgga 495
Score = 67.9 bits (34), Expect = 3e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 456
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 373
Query: 457 gatgcgttgtgctcacgg 474
|| |||||||||||||
Sbjct: 372 gacctgttgtgctcacgg 355
>gb| U39567.1 |GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit
mRNA, complete cds
Length = 765
Score = 79.8 bits (40), Expect = 9e-12
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 263 agcctggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatc 322
||||||| |||||| ||||||||||||||| ||||||||| || || | |||||||||||
Sbjct: 563 agcctgggggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatc 504
Query: 323 cgatgatgcgga 334
||||||| ||||
Sbjct: 503 cgatgatacgga 492
Score = 67.9 bits (34), Expect = 3e-08
Identities = 67/78 (85%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 456
||||| || |||||||||||||||||||| |||||||| || ||||||||||| || ||
Sbjct: 429 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagtatcctggt 370
Query: 457 gatgcgttgtgctcacgg 474
|| |||||||||||||
Sbjct: 369 gacctgttgtgctcacgg 352
>gb| AF024573.1 |AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small
subunit type II (rbcS2) mRNA, nuclear gene encoding
chloroplast protein, complete cds
Length = 784
Score = 79.8 bits (40), Expect = 9e-12
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccaggaga 458
|||||||| |||||||||||||| |||||||| || ||||||||||||||||||||
Sbjct: 417 ccgaacatgggcagcttccacatcgtccagtagcgcccatcgtagtacccaggaga 362
>emb| AJ786660.1 | Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate
carboxylase/oxygenase small subunit (rbcS1 gene)
Length = 459
Score = 77.8 bits (39), Expect = 4e-11
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccga 325
|||||||||| |||||||||| |||| ||||||||| |||||| |||||||||||||||
Sbjct: 459 tggtggcttgtaggcgatgaaactgatgcactgcacttgacgcttgttgtcgaatccga 401
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagta 434
||||||||| |||| || ||||||||||||||||||||
Sbjct: 329 gtgcatccgtacatgggaagcttccacattgtccagta 292
>emb| X13611.1 |ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate
carboxylase small subunit (EC 4.1.1.39)
Length = 2821
Score = 77.8 bits (39), Expect = 4e-11
Identities = 147/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| | ||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 2501 tggtggcttgtaggcaacgaaactgatgcactggacttgacgggtgttgtcgaatccgat 2442
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
||| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 2441 gatcctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 2382
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 2381 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 2322
Query: 447 gta 449
|||
Sbjct: 2321 gta 2319
>gb| AY093388.1 | Arabidopsis thaliana ribulose bisphosphate carboxylase, small
subunit (At1g67090) mRNA, complete cds
Length = 583
Score = 77.8 bits (39), Expect = 4e-11
Identities = 147/183 (80%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||| ||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 528 tggtggcttgtaggcaatgaaactgatgcactggacttgacgggtgttgtcgaatccgat 469
Query: 327 gatgcggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctg 386
|| | | | || | ||||||||||||||| ||| ||||| || || | ||| ||
Sbjct: 468 tattctaatgaaggcattggggtactccttcttgcactcttccacttccttcaacacttg 409
Query: 387 tgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgta 446
| || ||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||
Sbjct: 408 agcggagtcggtgcaaccgaacaagggaagcttccacattgtccagtaccgtccatcata 349
Query: 447 gta 449
|||
Sbjct: 348 gta 346
>gb| AF312228.1 |AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit precursor, gene, partial cds, nuclear gene
for chloroplast product
Length = 353
Score = 77.8 bits (39), Expect = 4e-11
Identities = 135/167 (80%)
Strand = Plus / Minus
Query: 283 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 342
||||| |||| ||||||||| |||||| ||||||| |||||||| || ||||| | |
Sbjct: 350 atgaaactgatgcactgcacttgacgcttgttgtcaaatccgataattcggacgaatgaa 291
Query: 343 tcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcat 402
| ||||| ||||||| ||||||| | ||||| || | ||||| || || || |||||
Sbjct: 290 tgtgggtattccttctggacctccccaacctccttcaaaacctgggttgcatctgtgcac 231
Query: 403 ccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|| |||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 230 ccatacatgggcagcttccacattgtccagtagcgtccatcgtagta 184
>emb| X55937.1 |BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate
carboxylase/oxygenase small subunit
Length = 2006
Score = 77.8 bits (39), Expect = 4e-11
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||||
Sbjct: 1516 tggtggcttgtaggcgatgaaactgatgcactggacctgacggttgttgtcgaatccgat 1457
Query: 327 gat 329
|||
Sbjct: 1456 gat 1454
Score = 73.8 bits (37), Expect = 6e-10
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 1386 gtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtagta 1334
>gb| AY273795.1 | Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit mRNA, partial cds; nuclear gene for chloroplast
product
Length = 357
Score = 75.8 bits (38), Expect = 1e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 352 tccttcttgacctcctccacctcgttgagcacctgtgtggcgtcggtgcatccgaacata 411
||||||| ||||||| | ||||| || | |||||||| || || ||||| || |||||
Sbjct: 296 tccttctggacctccccaacctccttcaaaacctgtgttgcatctgtgcacccaaacatg 237
Query: 412 ggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||||||||| || |||||||||||
Sbjct: 236 ggcagcttccacattgtccagtagcgtccatcgtagta 199
>gb| DQ336280.1 | Vitis pseudoreticulata ribulose-1,5-bisphophate
carboxylase/oxygenase small subunit mRNA, complete cds
Length = 543
Score = 75.8 bits (38), Expect = 1e-10
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 313 ttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacctcctccacc 372
||||||||||||||||| |||| | |||| |||||||||| || || | || | ||||
Sbjct: 494 ttgtcgaatccgatgattcggatgtgggcgttagggtactccgtcctggcttcttgcacc 435
Query: 373 tcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccag 432
|| || | |||||| | | ||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 434 tccttaatcacctgggctgagtcagtgcacccgaacatgggcagcttccacatggtccag 375
Query: 433 taccggccatcgtagtacccaggagatgcgttgtgctc 470
|||| || |||||||| || |||||| |||||||||
Sbjct: 374 taccttccgtcgtagtatcctggagatctgttgtgctc 337
>gb| AF044398.1 |AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small
subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 608
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagta 220
Score = 60.0 bits (30), Expect = 8e-06
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 283 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 342
||||| |||||||| ||||| ||||| | |||||||||||||||||| |||| | ||
Sbjct: 371 atgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatccatgcc 312
Query: 343 tcagggtactccttcttg 360
| ||||||||||||||||
Sbjct: 311 tgagggtactccttcttg 294
>gb| AF044396.1 |AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small
subunit R2 (rbcS-R2) mRNA, nuclear gene encoding
chloroplast protein, partial cds
Length = 574
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagta 220
Score = 46.1 bits (23), Expect = 0.13
Identities = 68/83 (81%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||| ||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 376 aggcaatgaaactgatgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 317
Query: 338 acgcgtcagggtactccttcttg 360
| || | ||||||||||||||||
Sbjct: 316 atgcctgagggtactccttcttg 294
>emb| BX833317.1 |CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 733
Score = 75.8 bits (38), Expect = 1e-10
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 396 ggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|||||||||||||| || ||||||||||||||||||||||| |||||||||||
Sbjct: 437 ggtgcatccgaacaatggaagcttccacattgtccagtaccgtccatcgtagta 384
Score = 46.1 bits (23), Expect = 0.13
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 562 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgat 504
>gb| U29939.1 |FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS7) mRNA, complete cds
Length = 743
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 420 gtcggtgcatccgaacataggcaacttccacattgtccagta 379
>gb| U29938.1 |FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS6) mRNA, complete cds
Length = 724
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 405 gtcggtgcatccgaacataggcaacttccacattgtccagta 364
Score = 52.0 bits (26), Expect = 0.002
Identities = 65/78 (83%)
Strand = Plus / Minus
Query: 283 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcg 342
||||| |||| ||| ||||| ||||| | |||||||||||||||||| |||| | ||
Sbjct: 515 atgaaactgatgcattgcacttgacggacgttgtcgaatccgatgatacggatccatgcc 456
Query: 343 tcagggtactccttcttg 360
| ||||||||||||||||
Sbjct: 455 tgagggtactccttcttg 438
>gb| U29937.1 |FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS5) mRNA, complete cds
Length = 731
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 408 gtcggtgcatccgaacataggcaacttccacattgtccagta 367
>gb| U29936.1 |FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS4) mRNA, complete cds
Length = 753
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 437 gtcggtgcatccgaacataggcaacttccacattgtccagta 396
>gb| U29935.1 |FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS3) mRNA, complete cds
Length = 746
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 422 gtcggtgcatccgaacataggcaacttccacattgtccagta 381
>gb| U29934.1 |FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit protein (rbcS2) mRNA, complete cds
Length = 763
Score = 75.8 bits (38), Expect = 1e-10
Identities = 41/42 (97%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagta 434
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 434 gtcggtgcatccgaacataggcaacttccacattgtccagta 393
Score = 54.0 bits (27), Expect = 5e-04
Identities = 75/91 (82%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| | |||||||| |||| |||||| || ||||| | |||||| |||||||||||
Sbjct: 557 tggcttggaagcgatgaaactgatgcactgaacttgacgaacgttgtcaaatccgatgat 498
Query: 330 gcggacatacgcgtcagggtactccttcttg 360
|||| | || | ||||||||||||||||
Sbjct: 497 acggatccatgcctgagggtactccttcttg 467
>emb| X01722.1 |NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose
bisphosphate carboxylase
Length = 796
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 591 tggcttgtaggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 532
Query: 330 gcgga 334
||||
Sbjct: 531 acgga 527
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
||||| || ||||||||||||||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 473 gtggcatcagtgcatccgaacataggtagcttccacatggtccagtatctgccatcatag 414
Query: 448 ta 449
||
Sbjct: 413 ta 412
>emb| BX832995.1 |CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 550
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||||| || ||| ||||||||||||||||||| |||||||||||
Sbjct: 259 gtcggtgcatccgaacaatggaagcctccacattgtccagtaccgtccatcgtagta 203
>emb| BX830542.1 |CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB8ZB01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 538
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||||| | || ||||||||||||||||||||||| |||||||||||
Sbjct: 228 gtcggtgcatccgaaaaatggaagcttccacattgtccagtaccgtccatcgtagta 172
>dbj| AB004883.1 | Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit, complete cds
Length = 931
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||| |||||||| |||| ||||||||| |||||||| ||||||||||||||
Sbjct: 463 gtcggtgcacccgaacatgggcaacttccacatggtccagtatcggccatcgtagta 407
>emb| AJ419827.1 |CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit
Length = 2034
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 1838 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 1779
Query: 430 cagta 434
|||||
Sbjct: 1778 cagta 1774
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 1938 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 1879
>emb| X07367.1 |BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit
Length = 726
Score = 73.8 bits (37), Expect = 6e-10
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct: 429 gtgcatccgaacaagggaagcttccacattgtccagtaacggccatcgtagta 377
Score = 69.9 bits (35), Expect = 9e-09
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||||||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 559 tggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgat 500
Query: 327 gat 329
|||
Sbjct: 499 gat 497
>emb| X05037.1 |FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase
Length = 752
Score = 73.8 bits (37), Expect = 6e-10
Identities = 127/157 (80%)
Strand = Plus / Minus
Query: 278 aggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcggacat 337
|||| ||||| |||||||| ||||| ||||| | |||||| ||||||||||| ||||
Sbjct: 527 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 468
Query: 338 acgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtggcgtcgg 397
| || | |||||||||||||||| ||| | | ||| || | ||| || | | |||||
Sbjct: 467 atgcctgagggtactccttcttgcactcttgaagctccttcatcacttgggctgagtcgg 408
Query: 398 tgcatccgaacataggcagcttccacattgtccagta 434
|||||||||||||||||| ||||||||| ||||||||
Sbjct: 407 tgcatccgaacataggcaacttccacatcgtccagta 371
>gb| DQ300277.1 | Coffea arabica cultivar Rume Sudan plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300276.1 | Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300275.1 | Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300274.1 | Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300273.1 | Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300272.1 | Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300271.1 | Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300270.1 | Coffea arabica cultivar Mundo novo plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300269.1 | Coffea arabica cultivar Ethiopia 167 plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300268.1 | Coffea arabica cultivar Ethiopia 87 plastid
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit (rbsc1) gene, exons 2, 3 and partial cds;
nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300267.1 | Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| DQ300266.1 | Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbsc1) gene, exons
2, 3 and partial cds; nuclear gene for plastid product
Length = 677
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 370 acctcgttgagcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtc 429
|||||||| |||||||| || ||||| ||||| ||| ||||||||||||||||||| |||
Sbjct: 481 acctcgttcagcacctgagttgcgtccgtgcagccgtacataggcagcttccacatggtc 422
Query: 430 cagta 434
|||||
Sbjct: 421 cagta 417
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| ||| ||||| |||| ||||||||||||||| | ||||||||||||||||||
Sbjct: 581 tggcttggcggcaatgaaactgatgcactgcacctgacggacgttgtcgaatccgatgat 522
>gb| J01308.1 |TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small
subunit mRNA
Length = 453
Score = 73.8 bits (37), Expect = 6e-10
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 270 tggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgat 329
||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||| |||||
Sbjct: 249 tggcttgtaggcgatgaaactgatgcactgcacttgacgcacgttgtcgaatccaatgat 190
Query: 330 gcgga 334
||||
Sbjct: 189 acgga 185
Score = 67.9 bits (34), Expect = 3e-08
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 388 gtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtag 447
||||| || ||||||||||||||||| ||||||||||| |||||||| | |||||| |||
Sbjct: 131 gtggcatcagtgcatccgaacataggtagcttccacatggtccagtatctgccatcatag 72
Query: 448 ta 449
||
Sbjct: 71 ta 70
>dbj| AB026685.1 | Physcomitrella patens mRNA for ribulose 1,5-bisphosphate
carboxylase/oxygenase small subunit, partial cds
Length = 818
Score = 73.8 bits (37), Expect = 6e-10
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 393 gtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||| |||||||| |||||||||||||| |||||||| || |||||||||||
Sbjct: 518 gtcggtgcacccgaacatgggcagcttccacatggtccagtagcgcccatcgtagta 462
>gb| AY705444.1 | Fagus sylvatica chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit (rbcS) mRNA,
complete cds; nuclear gene for chloroplast product
Length = 562
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 381 cacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggcc 440
|||||||||||| ||||||||||| ||||| |||||||||||||| |||||| || ||
Sbjct: 427 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 368
Query: 441 atcgtagtaccc 452
||| ||||||||
Sbjct: 367 atcatagtaccc 356
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 283 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 334
||||| |||| ||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 525 atgaaactgatgcactgcacttgacgcttgttgtcgaatccgatgattcgga 474
>gb| AF101233.1 |AF101233 Manihot esculenta clone U291 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 780
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 452
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb| AF101232.1 |AF101232 Manihot esculenta clone U216 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 793
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 452
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 451 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 396
>gb| AF101230.1 |AF101230 Manihot esculenta clone R312 ribulose 1,5-bisphosphate carboxylase
small chain precursor, mRNA, complete cds; chloroplast
gene for chloroplast product
Length = 811
Score = 71.9 bits (36), Expect = 2e-09
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtaccc 452
||||| || ||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct: 410 gtgcacccaaacattggcagcttccacattgtccagtaacgtccatcgtagtaccc 355
>gb| U39857.1 |GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase
small subunit precursor (rbcS) gene, nuclear gene
encoding chloroplast protein, complete cds
Length = 1069
Score = 71.9 bits (36), Expect = 2e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1055 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 996
Query: 331 cgga 334
||||
Sbjct: 995 cgga 992
Score = 54.0 bits (27), Expect = 5e-04
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagg 455
||||| || |||| ||||||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 929 gtgcagccaaacacaggcagcttccacatggtccagtagcgtccatcatagtatccagg 871
>gb| U39856.1 |GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit
precursor (rbcS) gene, nuclear gene encoding chloroplast
protein, complete cds
Length = 1089
Score = 71.9 bits (36), Expect = 2e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1075 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 1016
Query: 331 cgga 334
||||
Sbjct: 1015 cgga 1012
Score = 60.0 bits (30), Expect = 8e-06
Identities = 66/78 (84%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagtacccagga 456
||||| || |||||||||||||||||||| |||||| | || ||||||||||| || ||
Sbjct: 949 gtgcaaccaaacataggcagcttccacatggtccagcagcgtccatcgtagtatcctggt 890
Query: 457 gatgcgttgtgctcacgg 474
|| |||||||||||||
Sbjct: 889 gacctgttgtgctcacgg 872
>emb| X17546.1 |EGRBCS Euglena gracilis rbcS mRNA for the small subunits of ribulose
1,5-bisphosphate carboxylase/oxygenase (EC 4.1.1.39)
Length = 4300
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3738 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3679
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2877 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2818
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2442 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2383
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2013 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1954
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 720 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 661
Score = 67.9 bits (34), Expect = 3e-08
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 389 tggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1142 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1093
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagta 434
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 3306 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 3251
Score = 63.9 bits (32), Expect = 5e-07
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagta 434
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||
Sbjct: 1581 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagta 1526
>emb| X79152.1 |EGRBCS1 E.gracilis rbcS 1 gene exons 1 to 19
Length = 4446
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3827 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3768
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 3395 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 3336
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2531 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2472
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 2099 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 2040
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1667 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1608
Score = 71.9 bits (36), Expect = 2e-09
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 803 agcacctggctggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 744
Score = 67.9 bits (34), Expect = 3e-08
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 389 tggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 1225 tggcgtccgtgcagccgaacatgggcagcttccacatggtccagtaccgg 1176
Score = 63.9 bits (32), Expect = 5e-07
Identities = 53/60 (88%)
Strand = Plus / Minus
Query: 379 agcacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccgg 438
|||||||| ||||||| ||||| || ||||| |||||||||||||| ||||||||||||
Sbjct: 2963 agcacctggctggcgtccgtgcagccaaacatgggcagcttccacatggtccagtaccgg 2904
>gb| M16889.1 |SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4)
gene, complete cds
Length = 2185
Score = 71.9 bits (36), Expect = 2e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| ||||||||||||||| ||||||||| || || | ||||||||||||||||||
Sbjct: 1726 ggcttgtaggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgata 1667
Query: 331 cgga 334
||||
Sbjct: 1666 cgga 1663
Score = 65.9 bits (33), Expect = 1e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||| || |||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1600 gtgcaaccaaacataggcagcttccacatggtccagtagcgtccatcgtagta 1548
>gb| L10213.1 |CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit
gene, complete cds
Length = 3024
Score = 71.9 bits (36), Expect = 2e-09
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||||||||| ||||| || ||||| ||||||| ||||||||||||||||||
Sbjct: 2647 ggcttgtaggcgatgaaactgacacattgcacttgacgcacgttgtcgaatccgatgata 2588
Query: 331 cgga 334
||||
Sbjct: 2587 cgga 2584
Score = 65.9 bits (33), Expect = 1e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||| |||||||| |||| |||||||||||||||||| || |||||||||||
Sbjct: 2521 gtgcaaccgaacatgggcaacttccacattgtccagtaacgtccatcgtagta 2469
>dbj| AB006080.1 | Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate
carboxylase/oxygenase, complete cds
Length = 789
Score = 71.9 bits (36), Expect = 2e-09
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 381 cacctgtgtggcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggcc 440
|||||||||||| ||||||||||| ||||| |||||||||||||| |||||| || ||
Sbjct: 463 cacctgtgtggcatcggtgcatccaaacatgggcagcttccacatcacccagtaacgtcc 404
Query: 441 atcgtagtaccc 452
||| ||||||||
Sbjct: 403 atcatagtaccc 392
Score = 63.9 bits (32), Expect = 5e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 283 atgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatgcgga 334
||||| |||| ||||||||| |||||| ||||||||||||||||||| ||||
Sbjct: 561 atgaaactgatgcactgcacttgacgcttgttgtcgaatccgatgattcgga 510
>ref| NM_123203.2 | Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420
mRNA, complete cds
Length = 837
Score = 69.9 bits (35), Expect = 9e-09
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| |||| ||||| |||| ||| || || ||||| |||||||||||||||||||
Sbjct: 575 ggcttgtaggcaatgaaactgatgcattggacttgacgggtgttgtcgaatccgatgatc 516
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
| | | ||| ||||||||||||||||| || || || || || | ||| || | |
Sbjct: 515 ctaatgaaggcgccagggtactccttcttgcattcttcaacttccttcaacacttgagcg 456
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
| ||||||||||||||||| || |||||||||||||||||||| || ||||| |||||
Sbjct: 455 gagtcggtgcatccgaacaatggaagcttccacattgtccagtatcgtccatcatagta 397
>gb| BT012936.1 | Lycopersicon esculentum clone 114099R, mRNA sequence
Length = 1261
Score = 69.9 bits (35), Expect = 9e-09
Identities = 143/179 (79%)
Strand = Plus / Minus
Query: 271 ggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgatgatg 330
|||||| | |||||||| |||| ||||||||| ||||| | |||||||||||||||||
Sbjct: 1116 ggcttgtaagcgatgaaactgatgcactgcacttgacgaacattgtcgaatccgatgata 1057
Query: 331 cggacatacgcgtcagggtactccttcttgacctcctccacctcgttgagcacctgtgtg 390
||||| | || | ||||| ||||||| |||||| |||||| | ||||| ||
Sbjct: 1056 cggacccatgcctgtgggtaagccttctttgcctcctgcacctcagccaagacctgggtt 997
Query: 391 gcgtcggtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
|| || ||||| |||||||| |||| ||||||||| |||||||| | ||||||||||||
Sbjct: 996 gcatcagtgcacccgaacatgggcaacttccacatggtccagtatctgccatcgtagta 938
>emb| X16435.1 |SARUBISC Mustard Rubisco mRNA for the small subunit of ribulose bisphosphate
carboxylase
Length = 322
Score = 69.9 bits (35), Expect = 9e-09
Identities = 56/63 (88%)
Strand = Plus / Minus
Query: 267 tggtggcttgaaggcgatgaagctgacgcactgcacctgacgcatgttgtcgaatccgat 326
|||||||||| |||||||||| |||| |||||| || ||||| ||||||||||||||||
Sbjct: 231 tggtggcttgtaggcgatgaaactgatgcactggacttgacggttgttgtcgaatccgat 172
Query: 327 gat 329
|||
Sbjct: 171 gat 169
Score = 65.9 bits (33), Expect = 1e-07
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 397 gtgcatccgaacataggcagcttccacattgtccagtaccggccatcgtagta 449
||||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 101 gtgcatccgaacaagggaagcttccacattgtccagtaacgaccatcgtagta 49
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,808,877
Number of Sequences: 3902068
Number of extensions: 4808877
Number of successful extensions: 102313
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101235
Number of HSP's gapped (non-prelim): 959
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)