ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20o10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MP2K1_SERCA (Q91447) Dual specificity mitogen-activated protein ... 29 3.7

>MP2K1_SERCA (Q91447) Dual specificity mitogen-activated protein kinase kinase 1|
           (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK 1) (ERK
           activator kinase 1) (MAPK/ERK kinase 1) (MEK1)
           (Fragment)
          Length = 388

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 222 PXVNARKVEMLDGCDSEGASSVSEDXSKQRA 130
           P  +++++E++ GC  EG S V+E   +QRA
Sbjct: 257 PPPDSKELELMFGCPVEGDSPVTETSPRQRA 287


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,178,855
Number of Sequences: 219361
Number of extensions: 275908
Number of successful extensions: 619
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top