>FCP1_ENCCU (Q8SV03) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (CTD phosphatase FCP1)
          Length = 411

 Score = 33.1 bits (74), Expect = 0.88
 Identities = 17/47 (36%), Positives = 29/47 (61%)
 Frame = -2

Query: 711 EMNSIVEESRKLQKEAEENLKLKEFLVERGQIVDTLQGEMAVICEDV 571
           ++N  +   RK++KEA EN  L+EF+ +R +I D    E+A   +D+
Sbjct: 198 DINDPLRLKRKIEKEAGENKALEEFVSKRKKIEDIRNPEIASRLDDM 244

>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor|
          Length = 725

 Score = 32.3 bits (72), Expect = 1.5
 Identities = 31/132 (23%), Positives = 43/132 (32%)
 Frame = +2

Query: 302 LSSLTELAPSLSQPSNISTFLALTSGSSATGPATPVTVCLSLDSTXXXXXXXXXXXXXXX 481
           + + T ++ S  +PS+ S    +TS  S+T  + P T  LS  ST               
Sbjct: 147 VGTTTVVSSSAIEPSSASIISPVTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTS 206

Query: 482 XXXXXXRLDIVDRCNLLQDKRSSTICLS*DTSSQMTAISPCSVSTI*PRSTXXXXXXXXX 661
                                +ST   S  TSS +T+ S  S ST    ST         
Sbjct: 207 SSSTSTS----SSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTS-QSSTSTSSSSTST 261

Query: 662 XXXXXXXLDSST 697
                    SST
Sbjct: 262 SPSSTSTSSSST 273

>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 31.6 bits (70), Expect = 2.6
 Identities = 17/59 (28%), Positives = 35/59 (59%)
 Frame = -2

Query: 720  QEREMNSIVEESRKLQKEAEENLKLKEFLVERGQIVDTLQGEMAVICEDVSQLKQIVDE 544
            +ER ++ I+E+ + +Q+ A EN KLKE +      +D L  E A +  ++ Q ++ +++
Sbjct: 2484 EERHLSIILEKDQLIQEAAAENNKLKEEIRGLRSHMDDLNSENAKLDAELIQYREDLNQ 2542

>MUTS2_THEMA (Q9X105) MutS2 protein|
          Length = 757

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
 Frame = -2

Query: 711 EMNSIVEESRKLQKEAEENLKLKEFLVE-----RGQIVDTLQGEMAVICEDVSQLKQIVD 547
           +++ + EE RKLQKE EE +KL+E   E     R   ++    E+  + + + ++K+ +D
Sbjct: 515 KISLLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELD 574

Query: 546 ERL 538
           + +
Sbjct: 575 QAI 577

>VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf)|
          Length = 1396

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = -2

Query: 444 TEAVESKDKHTVTGVAGPVAEDPDVNARKVEMLDGCDSEGASSVSEDNSKQRAS 283
           T A+ES         +GP A+  ++NA++ E L+  DSE  + +S  +S+Q A+
Sbjct: 44  TSAIESSK------ASGPAAKQSEINAKQSE-LNAKDSENEAEISATSSQQSAT 90

>CL190_DROME (Q9VJE5) Restin homolog (Cytoplasmic linker protein 190)|
            (Microtubule-binding protein 190) (d-CLIP-190)
          Length = 1690

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 18/56 (32%), Positives = 30/56 (53%)
 Frame = -2

Query: 711  EMNSIVEESRKLQKEAEENLKLKEFLVERGQIVDTLQGEMAVICEDVSQLKQIVDE 544
            E N+++E  +K   E ++ L+  +      Q   TLQ E + + E +SQLKQ  +E
Sbjct: 1403 ESNTVLESQKKSHNEIQDKLEQAQ------QKERTLQEETSKLAEQLSQLKQANEE 1452

>ASPP1_MOUSE (Q62415) Apoptosis stimulating of p53 protein 1 (Protein|
           phosphatase 1 regulatory subunit 13B)
          Length = 1087

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -2

Query: 720 QEREMNSIVEESRKLQK-----EAEENLKLKEFLVERGQI 616
           QER     V E+ KLQK     EA+EN KLK+    RGQ+
Sbjct: 162 QERRQQQSVSENEKLQKLKERVEAQEN-KLKKIRAMRGQV 200

>PEM1_YEAST (P05374) Phosphatidylethanolamine N-methyltransferase (EC 2.1.1.17)|
           (PEAMT)
          Length = 869

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
 Frame = +2

Query: 2   IVYLYYRLSYNLGI-----YTYHVSTILTCLK 82
           + YL++R++YNLGI     Y  H  T+  C K
Sbjct: 90  VQYLFWRIAYNLGIGLVLHYQSHYETLTNCAK 121

>ASPP1_HUMAN (Q96KQ4) Apoptosis stimulating of p53 protein 1 (Protein|
           phosphatase 1 regulatory subunit 13B)
          Length = 1090

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -2

Query: 720 QEREMNSIVEESRKLQK-----EAEENLKLKEFLVERGQI 616
           QER     + E+ KLQK     EA+EN KLK+    RGQ+
Sbjct: 162 QERRQQQSISENEKLQKLKERVEAQEN-KLKKIRAMRGQV 200

>MRAW_CHRVO (Q7NPZ1) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 320

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -2

Query: 228 LPEFAR*IKNGGNNRLECLHSVRAKLVNLYFQDLS 124
           LP+ AR +  GG   +   HS+  ++V LY +D+S
Sbjct: 225 LPQAARLLNEGGRLAVISFHSLEDRIVKLYLRDVS 259

>MP2K1_SERCA (Q91447) Dual specificity mitogen-activated protein kinase kinase 1|
           (EC 2.7.12.2) (MAP kinase kinase 1) (MAPKK 1) (ERK
           activator kinase 1) (MAPK/ERK kinase 1) (MEK1)
           (Fragment)
          Length = 388

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = -2

Query: 378 PDVNARKVEMLDGCDSEGASSVSEDNSKQRA 286
           P  +++++E++ GC  EG S V+E + +QRA
Sbjct: 257 PPPDSKELELMFGCPVEGDSPVTETSPRQRA 287


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,887,262
Number of Sequences: 219361
Number of extensions: 1557593
Number of successful extensions: 4881
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4876
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)