Clone Name | rbasd21d04 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 252 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 311 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 312 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 371 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 372 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 431 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 432 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 491 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 492 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 551 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 552 atcccagccat 562 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 252 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 311 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 312 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 371 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 372 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 431 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 432 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 491 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 492 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 551 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 552 atcccagccat 562 ||||| ||||| Sbjct: 114 atcccggccat 104
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 537 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 478 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 477 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 418 Query: 252 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 311 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 417 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 358 Query: 312 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 371 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 357 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 298 Query: 372 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 431 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 297 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 238 Query: 432 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 491 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 237 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 178 Query: 492 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 551 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 177 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 118 Query: 552 atcccagccat 562 ||||| ||||| Sbjct: 117 atcccggccat 107
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 434 bits (219), Expect = e-118 Identities = 378/431 (87%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 534 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 475 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 474 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 415 Query: 252 atctgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttc 311 ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 414 atctgtgcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttc 355 Query: 312 ttcaggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttg 371 |||||||| ||||| ||||||||||||| |||| |||| |||||||| || ||||||||| Sbjct: 354 ttcaggtcacttgagacacgctcatgggcaaggctctcggtgtcgtcatccagccgcttg 295 Query: 372 gtgttgagggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtg 431 ||||||||||| || || || || || |||||||| |||||||||||||||||||| || Sbjct: 294 gtgttgagggatgtgccactggacgccgccttgtttgttccagcgttatacttcttcatg 235 Query: 432 gtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtcc 491 || |||||||||||||||||||||||||| |||||||||||||| || ||||||||| | Sbjct: 234 gtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcatccttcttggcg 175 Query: 492 gcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggacca 551 |||||| | | ||| ||||||||||||| | |||||||||||||||||||| ||||||| Sbjct: 174 gcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcctgatcggacca 115 Query: 552 atcccagccat 562 ||||| ||||| Sbjct: 114 atcccggccat 104
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 398 bits (201), Expect = e-108 Identities = 369/425 (86%) Strand = Plus / Minus Query: 138 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 197 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 606 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 547 Query: 198 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 257 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 487 Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 486 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 427 Query: 318 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 377 || |||| ||| |||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 426 tcacttggaactcgctcatgggcgaggttctctgtgtcgtcgtcgaggcgcttggtgttg 367 Query: 378 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 437 ||||| || ||||| || || ||||||||| | |||||||| ||||||| |||| ||| Sbjct: 366 agggatgtgccgctggacgccgccttgttcataccagcgttgaacttcttcatggtctcg 307 Query: 438 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 497 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 306 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 247 Query: 498 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 557 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 246 gtgggtgccttcttccgcacaaccaccggctcccagtcctgcctgatcggcccgatcccg 187 Query: 558 gccat 562 ||||| Sbjct: 186 gccat 182
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 391 bits (197), Expect = e-105 Identities = 368/425 (86%) Strand = Plus / Minus Query: 138 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 197 ||||||| ||||||||| | ||| || |||||||||||||| ||||| ||||| | ||| Sbjct: 538 ttcttgccacgcagcttcgttcccagggccctctcgagcttgccaatgatctgctggttg 479 Query: 198 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 257 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 478 ggaattgccttgcctgactcatactcctggatcacctgtggcttctcattgatcatctga 419 Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 ||||| ||||||||||||| ||||||||| |||||||||||||| || |||||||||||| Sbjct: 418 gcaagctgtgcctgggtcaacttcttatcgagccttgcttgcatgagatttttcttcagg 359 Query: 318 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 377 || |||| ||| |||||||||| |||||||| ||||| |||||||| |||||||||||| Sbjct: 358 tcacttggaactcgctcatgggcgaggttctctgtgtcatcgtcgaggcgcttggtgttg 299 Query: 378 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 437 ||||| || ||||| || || ||||||||| | |||||||| |||||||| |||| ||| Sbjct: 298 agggatgtgccgctggacgccgccttgttcataccagcgttgtacttcttcatggtctcg 239 Query: 438 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 497 ||||| |||||||||||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 238 atctccgcgccggagcggcgcgcggcgttgacggccttctcatccttcttggcagcggcg 179 Query: 498 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 557 | | ||| |||||||||| || | ||||||||||||||| |||| ||| || ||||| Sbjct: 178 gtgggtgccttcttccgcacaaccaccggctcccagtcctgtctgatcggcccgatcccg 119 Query: 558 gccat 562 ||||| Sbjct: 118 gccat 114
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Minus Query: 138 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 197 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 539 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 480 Query: 198 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 257 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 479 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 420 Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 419 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 360 Query: 318 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 377 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 359 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 300 Query: 378 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 437 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 299 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 240 Query: 438 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 497 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 239 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 180 Query: 498 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 557 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 179 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 120 Query: 558 gccat 562 ||||| Sbjct: 119 gccat 115
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Minus Query: 138 ttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattgttc 197 ||||||| ||||| ||| | ||| || |||||||||||||| | ||| ||||| | ||| Sbjct: 664 ttcttgccacgcaacttggttcccagggccctctcgagcttgctaatgatctgctggttg 605 Query: 198 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 257 || || |||||||| || || |||||||| |||||||||||||||||||| ||||||||| Sbjct: 604 gggattgccttgcctgattcatactcctgaatcacctgtggcttctcatttatcatctga 545 Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 |||||||||||||| |||| ||||||||| |||||||||||||| || || |||||||| Sbjct: 544 gcaagttgtgcctgtgtcagcttcttatcgagccttgcttgcatgagattcttcttcaga 485 Query: 318 tcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttg 377 || |||| ||| |||||||||| ||||| || |||||||||||||| |||||||||||| Sbjct: 484 tcacttggaactcgctcatgggcgaggttttcggtgtcgtcgtcgaggcgcttggtgttg 425 Query: 378 agggaagttccgctagatgcagccttgttcgttccagcgttatacttcttggtggtgtcg 437 ||||| || ||||| ||||| ||||||||||| |||||||| |||||||| |||| ||| Sbjct: 424 agggatgtaccgctggatgccgccttgttcgtaccagcgttgtacttcttcatggtatcg 365 Query: 438 atctcggcgccggagcggcgggcagcgttgacggccttttcgtccttcttgtccgcggcg 497 ||||| || |||| |||||| || |||||||||||||| || ||||||||| | |||||| Sbjct: 364 atctccgcaccggcgcggcgcgcggcgttgacggccttctcatccttcttggcggcggcg 305 Query: 498 ttctgggccctcttccgcaccactatcggctcccagtcctgcctgagcggaccaatccca 557 | | ||| |||||||||| || | |||||||||||||||||||| ||| || ||||| Sbjct: 304 gtgggtgccttcttccgcacaacgaccggctcccagtcctgcctgatcggtccgatcccg 245 Query: 558 gccat 562 ||||| Sbjct: 244 gccat 240
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 421 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 480 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 16975284 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 16975225 Query: 481 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 540 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 16975224 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 16975165 Query: 541 tgagcggaccaatcccagccat 562 ||| |||||||||||| ||||| Sbjct: 16975164 tgatcggaccaatcccggccat 16975143 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 16977492 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 16977433 Query: 318 tcgcttgaaacacgctcat 336 || ||||| |||||||||| Sbjct: 16977432 tcacttgagacacgctcat 16977414 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 16977731 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 16977672 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 16977671 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 16977612 Query: 252 atctg 256 ||||| Sbjct: 16977611 atctg 16977607 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 332 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 391 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 16975770 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 16975711 Query: 392 agatgcagccttgttcgttccagcgttat 420 || || |||||||| ||||||||||||| Sbjct: 16975710 ggacgccgccttgtttgttccagcgttat 16975682
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 421 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 480 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 10801 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 10742 Query: 481 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 540 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 10741 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 10682 Query: 541 tgagcggaccaatcccagccat 562 ||| |||||||||||| ||||| Sbjct: 10681 tgatcggaccaatcccggccat 10660 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 13009 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 12950 Query: 318 tcgcttgaaacacgctcat 336 || ||||| |||||||||| Sbjct: 12949 tcacttgagacacgctcat 12931 Score = 105 bits (53), Expect = 2e-19 Identities = 107/125 (85%) Strand = Plus / Minus Query: 132 cattacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctga 191 ||||| ||||||| |||||||| | |||||| ||||| || ||||| || || ||||| Sbjct: 13248 cattatttcttgccgcgcagctttgttccaagagccctttcaagcttcccgatgatctgc 13189 Query: 192 ttgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatc 251 | ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||| Sbjct: 13188 tggttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatc 13129 Query: 252 atctg 256 ||||| Sbjct: 13128 atctg 13124 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 332 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 391 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 11287 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 11228 Query: 392 agatgcagccttgttcgttccagcgttat 420 || || |||||||| ||||||||||||| Sbjct: 11227 ggacgccgccttgtttgttccagcgttat 11199
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Minus Query: 421 acttcttggtggtgtcgatctcggcgccggagcggcgggcagcgttgacggccttttcgt 480 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||| || | Sbjct: 122295 acttcttcatggtctcgatctcggcgccggagcggcgggcggcgttgacggccttctcat 122236 Query: 481 ccttcttgtccgcggcgttctgggccctcttccgcaccactatcggctcccagtcctgcc 540 |||||||| | |||||| | | ||| ||||||||||||| | ||||||||||||||||| Sbjct: 122235 ccttcttggcggcggcggtgggcgccttcttccgcaccaccaccggctcccagtcctgcc 122176 Query: 541 tgagcggaccaatcccagccat 562 ||| |||||||||||| ||||| Sbjct: 122175 tgatcggaccaatcccggccat 122154 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 258 gcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcagg 317 ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 124503 gcaagctgtgcctgggtcatcttcttgtccagccttgcttgcatgaggtttttcttcagg 124444 Query: 318 tcgcttgaaacacgctcat 336 || ||||| |||||||||| Sbjct: 124443 tcacttgagacacgctcat 124425 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Minus Query: 194 gttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcat 253 ||||||||| || || || ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 124680 gttcggaatagctttacctgactcgtactcctggatcacctggggcttctcattgatcat 124621 Query: 254 ctg 256 ||| Sbjct: 124620 ctg 124618 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 332 ctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagttccgct 391 |||| ||| |||| |||| |||||||| || |||||||||||||||||||| || || || Sbjct: 122781 ctcacgggcaaggctctcggtgtcgtcatccagccgcttggtgttgagggatgtgccact 122722 Query: 392 agatgcagccttgttcgttccagcgttat 420 || || |||||||| ||||||||||||| Sbjct: 122721 ggacgccgccttgtttgttccagcgttat 122693
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 89.7 bits (45), Expect = 1e-14 Identities = 222/281 (79%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || ||||||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttccccgactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 210 cccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcc 269 ||||||||||||||||||||||| || ||||||||| |||| || ||||||||||||||| Sbjct: 37003 cccgactcgtactcctggatcacttgaggcttctcactgataatttgagcaagttgtgcc 36944 Query: 270 tgggtcatcttcttatccagccttgcttgcat 301 || || | |||||| |||| ||| | |||||| Sbjct: 36943 tgagtaagcttcttgtccatcctagtttgcat 36912
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 428 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 369 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 368 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 309 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 308 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 249 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 248 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 189 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 188 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 148
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 519 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 460 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 459 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 400 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 399 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 340 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 339 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 280 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 279 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 239
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 81.8 bits (41), Expect = 3e-12 Identities = 221/281 (78%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 573 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 514 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatc 254 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 513 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatcaga 454 Query: 255 tgagcaagttgtgcctgggtcatcttcttatccagccttgcttgcataaggtttttcttc 314 || |||||||| | ||| |||| |||||| ||| || |||||||| | | ||||||| Sbjct: 453 tgggcaagttgggactgagtcagcttcttctcccctctagcttgcatgatggctttcttc 394 Query: 315 aggtcgcttgaaacacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtg 374 | || | | ||||| ||||| || | ||||||||| || || || ||| ||| ||| Sbjct: 393 aattcagtgggcacacgatcatgagataagttctcagtatcatcatctagcttctttgtg 334 Query: 375 ttgagggaagttccgctagatgcagccttgttcgttccagc 415 || | ||| || ||||| |||||||||||||||| |||||| Sbjct: 333 ttcaaggaggtgccgcttgatgcagccttgttcgatccagc 293
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 198 ggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctga 257 ||||||||||| || ||||| ||||||||||| | || ||||||||||| |||| ||| Sbjct: 423 ggaatcgcctttccagactcatactcctggatgatttgaggcttctcatttatcaactgg 364 Query: 258 gcaagttgtgcctgggtcatcttcttatc 286 |||||||| |||||||||| ||||||||| Sbjct: 363 gcaagttgagcctgggtcagcttcttatc 335 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 430 tggtgtcgatctcggcgccggagcggcgggcagcgttgacggc 472 |||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 191 tggtttcgatctcagcaccggagcgacgggcggcgttgacggc 149
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 75.8 bits (38), Expect = 2e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 8479 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 8420 Query: 195 ttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttctcattgatca 252 |||||||| || || || |||||||| || |||||||| ||||||||||||||||||| Sbjct: 8419 ttcggaattgctttcccagactcgtattcttggatcacttgtggcttctcattgatca 8362 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| |||||||||||||||| |||||| Sbjct: 7831 ccgcttgatgcagccttgttcgatccagc 7803
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 266 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 267 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 326 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 327 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 386 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 266 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 356 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 297 Query: 267 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 326 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 296 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 237 Query: 327 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 386 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 236 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 177 Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| ||||| |||||||| |||||||| Sbjct: 176 ccgcttgatgccgccttgttggttccagc 148
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 266 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 420 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 361 Query: 267 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 326 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 360 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 301 Query: 327 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 386 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 300 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 241 Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| ||||| |||||||| |||||||| Sbjct: 240 ccgcttgatgccgccttgttggttccagc 212
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 266 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 411 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 352 Query: 267 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 326 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 351 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 292 Query: 327 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 386 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 291 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgtttagagatgtg 232 Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| ||||| |||||||| |||||||| Sbjct: 231 ccgcttgatgccgccttgttggttccagc 203
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatctgagcaagttgt 266 ||||| ||||| ||||| || ||||| ||||||||||||||||| || ||||||||||| Sbjct: 425 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatttgagcaagttgg 366 Query: 267 gcctgggtcatcttcttatccagccttgcttgcataaggtttttcttcaggtcgcttgaa 326 | |||||| | |||||| || ||| |||||||||| | |||||| || || | | Sbjct: 365 gactgggttagcttcttgtctgtcctggcttgcataatggctttctttagctcagtaggc 306 Query: 327 acacgctcatgggaaaggttctcagtgtcgtcgtcgagccgcttggtgttgagggaagtt 386 ||||| ||||| | ||||||||||||||| || || ||| || ||||| || || || Sbjct: 305 acacgttcatgagtaaggttctcagtgtcatcatcaagcatttttgtgttcagagatgtg 246 Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| ||||| |||||||| |||||||| Sbjct: 245 ccgcttgatgccgccttgttggttccagc 217
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Minus Query: 183 attatctgattgttcggaatcgccttgcccgactcgtactcctggatcacctgtggcttc 242 |||||||| | ||| ||||| ||||| ||||||||||| || ||||| | |||||||||| Sbjct: 394 attatctgttggtttggaattgcctttcccgactcgtattcttggataatctgtggcttc 335 Query: 243 tcattgatcatctgagcaagttgtgcctgggtcatcttctt 283 ||||| |||| ||||||||||| | ||| |||| |||||| Sbjct: 334 tcatttatcaattgagcaagttgagactgagtcagcttctt 294 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 435 tcgatctcggcgccggagcggcgggcagcgttgacggc 472 |||||||||||||||||||| ||||| ||||| ||||| Sbjct: 142 tcgatctcggcgccggagcgacgggcggcgttaacggc 105
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 135 tacttcttgctacgcagcttagctccaagtgccctctcgagctttccaattatctgattg 194 |||||||| | ||| || ||||| |||||||||||||| |||||| || ||||| | Sbjct: 496 tacttctttccacggagtttagcaccaagtgccctctccagctttgaaaggatctgttga 437 Query: 195 ttcggaatcgccttgccc-gactcgtactcctggatcacctgtggcttctcattgatca 252 |||||||| || || | | |||||||| || |||||||| ||||||||||||||||||| Sbjct: 436 ttcggaattgctttccacagactcgtattcttggatcacttgtggcttctcattgatca 378 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 387 ccgctagatgcagccttgttcgttccagc 415 ||||| |||||||||||||||| |||||| Sbjct: 242 ccgcttgatgcagccttgttcgatccagc 214
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 219 tactcctggatcacctgtggcttctcattgatcatctgagcaagttgtgcctgggt 274 ||||| ||||| | ||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 390 tactcttggattatctggggcttttcattgatcatctgagcaagctgagcctgggt 335 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 435 tcgatctcggcgccggagcggcgggcagcgttgacggccttttcgtccttctt 487 ||||||||||| || | ||| || |||||||||||| |||| ||||||||||| Sbjct: 174 tcgatctcggcaccagcgcgacgagcagcgttgacgaccttctcgtccttctt 122
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 255 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 9784 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 9832
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 207 ttgcccgactcgtactcctggatcacctgtggcttctcattgatcatct 255 ||||| ||||| ||||| || ||||| ||||||||||||||||| |||| Sbjct: 105703 ttgccagactcatactcttgaatcacttgtggcttctcattgatgatct 105751
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 346 gatcacctgtggcttctcattgat 323
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 141458 gatcacctgtggcttctcattgat 141481
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 352 gatcacctgtggcttctcattgat 329
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 318 gatcacctgtggcttctcattgat 295
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 227 gatcacctgtggcttctcattgat 250 |||||||||||||||||||||||| Sbjct: 355 gatcacctgtggcttctcattgat 332
>gb|AY509992.1| Malus x domestica cultivar Royal Gala sucrose phosphate phosphatase mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 gggaaaggttctcagtgtcgt 357 ||||||||||||||||||||| Sbjct: 222 gggaaaggttctcagtgtcgt 202
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 426 ttggtggtgtcgatctcggcg 446 ||||||||||||||||||||| Sbjct: 188873 ttggtggtgtcgatctcggcg 188853
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 cttggtggtgtcgatctcggcgccg 449 ||||||||||||| ||||||||||| Sbjct: 2350 cttggtggtgtcgctctcggcgccg 2374
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 cttggtggtgtcgatctcggcgccg 449 ||||||||||||| ||||||||||| Sbjct: 238677 cttggtggtgtcgctctcggcgccg 238701
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 549 ccaatcccagccatatctccctgat 573 |||| |||||||||||||||||||| Sbjct: 56969 ccaaacccagccatatctccctgat 56945
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 ctcggcgccggagcggcgggc 460 ||||||||||||||||||||| Sbjct: 874563 ctcggcgccggagcggcgggc 874543
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 425 cttggtggtgtcgatctcggcgccg 449 ||||||||||||| ||||||||||| Sbjct: 1865324 cttggtggtgtcgctctcggcgccg 1865300
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 425 cttggtggtgtcgatctcggcgccg 449 ||||||||||||| ||||||||||| Sbjct: 1983400 cttggtggtgtcgctctcggcgccg 1983376
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 425 cttggtggtgtcgatctcggcgccg 449 ||||||||||||| ||||||||||| Sbjct: 1072430 cttggtggtgtcgctctcggcgccg 1072454
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 549 ccaatcccagccatatctccctgat 573 |||| |||||||||||||||||||| Sbjct: 22605 ccaaacccagccatatctccctgat 22581
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ctcggcgccggagcggcggg 459 |||||||||||||||||||| Sbjct: 376 ctcggcgccggagcggcggg 395
>ref|XM_878913.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 3 (LOC532674), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctcccagtcctgcctgagc 545 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_611824.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 1 (LOC532674), mRNA Length = 5390 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctcccagtcctgcctgagc 545 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>ref|XM_866654.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 2 (LOC532674), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 526 gctcccagtcctgcctgagc 545 |||||||||||||||||||| Sbjct: 63 gctcccagtcctgcctgagc 82
>emb|Z32679.1|CEC05B5 Caenorhabditis elegans Cosmid C05B5, complete sequence Length = 30320 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 attcagtatcaaccaacaggaacagcct 81 ||||||||||| |||||| ||||||||| Sbjct: 16368 attcagtatcagccaacatgaacagcct 16395
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence Length = 150332 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cttgcataaggtttttcttc 314 |||||||||||||||||||| Sbjct: 126454 cttgcataaggtttttcttc 126435
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 cgcaccactatcggctccca 532 |||||||||||||||||||| Sbjct: 1007050 cgcaccactatcggctccca 1007031
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tggtggtgtcgatctcggcg 446 |||||||||||||||||||| Sbjct: 136957 tggtggtgtcgatctcggcg 136976
>gb|AC133540.2| Homo sapiens chromosome 16 clone LA16c-352F7, complete sequence Length = 40695 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cttgcataaggtttttcttc 314 |||||||||||||||||||| Sbjct: 2479 cttgcataaggtttttcttc 2498
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agccgcttggtgttgaggga 382 |||||||||||||||||||| Sbjct: 44273 agccgcttggtgttgaggga 44292
>gb|DQ397548.1| Cenarchaeum symbiosum clone C04G08, complete sequence Length = 46706 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 gtatcaaccaacaggaacag 78 |||||||||||||||||||| Sbjct: 45414 gtatcaaccaacaggaacag 45395
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cttgcataaggtttttcttc 314 |||||||||||||||||||| Sbjct: 8402 cttgcataaggtttttcttc 8383
>ref|NM_001025972.1| Caenorhabditis elegans C05B5.9 (C05B5.9) mRNA, complete cds Length = 598 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 54 attcagtatcaaccaacaggaacagcct 81 ||||||||||| |||||| ||||||||| Sbjct: 242 attcagtatcagccaacatgaacagcct 269
>emb|AL929242.16| Mouse DNA sequence from clone RP23-78D16 on chromosome 2, complete sequence Length = 217352 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 catggttattcagtatcaac 66 |||||||||||||||||||| Sbjct: 135410 catggttattcagtatcaac 135391
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 441 tcggcgccggagcggcgggcagcg 464 |||||||||||| ||||||||||| Sbjct: 7251 tcggcgccggaggggcgggcagcg 7228
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 agccgcttggtgttgaggga 382 |||||||||||||||||||| Sbjct: 121 agccgcttggtgttgaggga 140 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,310,377 Number of Sequences: 3902068 Number of extensions: 4310377 Number of successful extensions: 75982 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75566 Number of HSP's gapped (non-prelim): 408 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)