ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21c23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464058.1| Oryza sativa (japonica cultivar-group), mRNA 131 3e-27
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
3dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
4dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic D... 131 3e-27
5dbj|AK111719.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
6gb|AY105233.1| Zea mays PCO087232 mRNA sequence 113 7e-22
7ref|XM_606290.2| PREDICTED: Bos taurus similar to CG8566-PD (LOC... 42 2.2
8gb|AE014075.1| Escherichia coli CFT073, complete genome 42 2.2
9gb|CP000243.1| Escherichia coli UTI89, complete genome 42 2.2
10emb|AL732367.3| Human DNA sequence from clone RP11-81L14 on chro... 42 2.2
11gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 42 2.2
12emb|X04691.1|ECXYLIK E. coli genes for xylose isomerase and xylu... 42 2.2
13gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 42 2.2
14dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 42 2.2
15gb|U00039.1|ECOUW76 E. coli chromosomal region from 76.0 to 81.5... 42 2.2
16gb|S68257.1| D-xylulose keto-isomerase [Escherichia coli, Genomi... 42 2.2
17dbj|AP006254.1| Homo sapiens genomic DNA, chromosome 9, clone:RP... 42 2.2
18gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 42 2.2
19dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 42 2.2
20gb|K01996.1|ECOXYLABA E.coli xylA gene coding for xylose isomera... 42 2.2
21dbj|AB020875.1| Homo sapiens genomic DNA of 9q32 anti-oncogene o... 42 2.2
22gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O1... 40 8.7
23ref|NM_057200.1| Rattus norvegicus kinesin family member 1B (Kif... 40 8.7
24gb|AY722648.1| Canine papillomavirus 2, complete genome 40 8.7
25gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence 40 8.7
26ref|XM_362984.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 8.7
27ref|XM_818469.1| Trypanosoma brucei TREU927 clone RPCI93-12O16 h... 40 8.7
28gb|AC011339.5| Homo sapiens chromosome 5 clone CTC-260J12, compl... 40 8.7
29gb|DP000004.1| Lemur catta target 1 genomic scaffold 40 8.7
30dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
31gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complet... 40 8.7
32gb|AC116917.2| Homo sapiens chromosome 5 clone RP11-756G12, comp... 40 8.7
33gb|AC123544.4| Lemur catta clone LB2-246N5, complete sequence 40 8.7
34gb|AC010291.5|AC010291 Homo sapiens chromosome 5 clone CTB-130E2... 40 8.7
35dbj|AB120429.1| Rattus norvegicus mRNA for kinesin-family protei... 40 8.7
36dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
37gb|AC171133.2| Helobdella robusta clone CH306-1A4, complete sequ... 40 8.7
38dbj|AB070355.1| Rattus norvegicus mRNA for kinesin-family protei... 40 8.7 
>ref|XM_464058.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3443

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                        
Query: 423  atccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgat 482
            ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 2959 atccatgcaaacatgaatcaatttctgctggtaatgcccgaagacctcgctgaccgcgat 2900

                                                      
Query: 483  gaggtcctcgtcactcacattcttggatgggaacaggagctt 524
             |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 2899 caggtcctcgtcgtccacattcttggaagggaaccggagctt 2858



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 589  gaatagatctcatggcaggcaagcaagaacag 620
            ||||||||||||||||| ||||||||||||||
Sbjct: 2784 gaatagatctcatggcacgcaagcaagaacag 2753
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                           
Query: 423     atccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgat 482
               ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 1964890 atccatgcaaacatgaatcaatttctgctggtaatgcccgaagacctcgctgaccgcgat 1964831

                                                         
Query: 483     gaggtcctcgtcactcacattcttggatgggaacaggagctt 524
                |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 1964830 caggtcctcgtcgtccacattcttggaagggaaccggagctt 1964789



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                               
Query: 589     gaatagatctcatggcaggcaagcaagaacag 620
               ||||||||||||||||| ||||||||||||||
Sbjct: 1964715 gaatagatctcatggcacgcaagcaagaacag 1964684
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>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0026E05
          Length = 159860

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                         
Query: 423   atccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgat 482
             ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 15098 atccatgcaaacatgaatcaatttctgctggtaatgcccgaagacctcgctgaccgcgat 15039

                                                       
Query: 483   gaggtcctcgtcactcacattcttggatgggaacaggagctt 524
              |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 15038 caggtcctcgtcgtccacattcttggaagggaaccggagctt 14997



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                             
Query: 589   gaatagatctcatggcaggcaagcaagaacag 620
             ||||||||||||||||| ||||||||||||||
Sbjct: 14923 gaatagatctcatggcacgcaagcaagaacag 14892
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>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0081C13
          Length = 144624

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                          
Query: 423    atccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgat 482
              ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 104451 atccatgcaaacatgaatcaatttctgctggtaatgcccgaagacctcgctgaccgcgat 104392

                                                        
Query: 483    gaggtcctcgtcactcacattcttggatgggaacaggagctt 524
               |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 104391 caggtcctcgtcgtccacattcttggaagggaaccggagctt 104350



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                              
Query: 589    gaatagatctcatggcaggcaagcaagaacag 620
              ||||||||||||||||| ||||||||||||||
Sbjct: 104276 gaatagatctcatggcacgcaagcaagaacag 104245
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>dbj|AK111719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023G19, full
            insert sequence
          Length = 3442

 Score =  131 bits (66), Expect = 3e-27
 Identities = 93/102 (91%)
 Strand = Plus / Minus

                                                                        
Query: 423  atccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgat 482
            ||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 2957 atccatgcaaacatgaatcaatttctgctggtaatgcccgaagacctcgctgaccgcgat 2898

                                                      
Query: 483  gaggtcctcgtcactcacattcttggatgggaacaggagctt 524
             |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 2897 caggtcctcgtcgtccacattcttggaagggaaccggagctt 2856



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 589  gaatagatctcatggcaggcaagcaagaacag 620
            ||||||||||||||||| ||||||||||||||
Sbjct: 2782 gaatagatctcatggcacgcaagcaagaacag 2751
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>gb|AY105233.1| Zea mays PCO087232 mRNA sequence
          Length = 1404

 Score =  113 bits (57), Expect = 7e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                       
Query: 424 tccatgcaaagatgaatcagtttctgctggtactgcccgaagacctcgctgaccgcgatg 483
           |||||||| ||||||| ||| |||||||||||||||||||||||||| ||||| ||||| 
Sbjct: 921 tccatgcagagatgaaccagcttctgctggtactgcccgaagacctcactgactgcgatc 862

                                                    
Query: 484 aggtcctcgtcactcacattcttggatgggaacaggagctt 524
           |||||||||||   |||||||||||| |||||| |||||||
Sbjct: 861 aggtcctcgtcggccacattcttggaagggaaccggagctt 821
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>ref|XM_606290.2| PREDICTED: Bos taurus similar to CG8566-PD (LOC527883), mRNA
          Length = 5136

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 447  ctgctggtactgcccgaagacctcg 471
            ||||||||| |||||||||||||||
Sbjct: 3255 ctgctggtagtgcccgaagacctcg 3231
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 4168022 tggcaggcaagcaagaagagagcgg 4167998
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 3996241 tggcaggcaagcaagaagagagcgg 3996217
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>emb|AL732367.3| Human DNA sequence from clone RP11-81L14 on chromosome 9, complete
             sequence
          Length = 120978

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    tgacacataaaatttacatta 101
             |||||||||||||||||||||
Sbjct: 66398 tgacacataaaatttacatta 66378
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 3728412 tggcaggcaagcaagaagagagcgg 3728388
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>emb|X04691.1|ECXYLIK E. coli genes for xylose isomerase and xylulose kinase
          Length = 4176

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 601 tggcaggcaagcaagaacagagcgg 625
           ||||||||||||||||| |||||||
Sbjct: 589 tggcaggcaagcaagaagagagcgg 613
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ctagtgaaaacagtgccaaca 122
             |||||||||||||||||||||
Sbjct: 69481 ctagtgaaaacagtgccaaca 69461
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 3910026 tggcaggcaagcaagaagagagcgg 3910050
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>gb|U00039.1|ECOUW76 E. coli chromosomal region from 76.0 to 81.5 minutes
          Length = 225419

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 601    tggcaggcaagcaagaacagagcgg 625
              ||||||||||||||||| |||||||
Sbjct: 144640 tggcaggcaagcaagaagagagcgg 144616
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>gb|S68257.1| D-xylulose keto-isomerase [Escherichia coli, Genomic, 1611 nt]
          Length = 1611

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 601 tggcaggcaagcaagaacagagcgg 625
           ||||||||||||||||| |||||||
Sbjct: 586 tggcaggcaagcaagaagagagcgg 610
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>dbj|AP006254.1| Homo sapiens genomic DNA, chromosome 9, clone:RP11-145L23, complete
             sequence
          Length = 194718

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    tgacacataaaatttacatta 101
             |||||||||||||||||||||
Sbjct: 21880 tgacacataaaatttacatta 21860
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 4543788 tggcaggcaagcaagaagagagcgg 4543764
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 601     tggcaggcaagcaagaacagagcgg 625
               ||||||||||||||||| |||||||
Sbjct: 4476559 tggcaggcaagcaagaagagagcgg 4476535
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>gb|K01996.1|ECOXYLABA E.coli xylA gene coding for xylose isomerase and xylB gene coding
           for xylulose kinase, complete cds
          Length = 4176

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 601 tggcaggcaagcaagaacagagcgg 625
           ||||||||||||||||| |||||||
Sbjct: 589 tggcaggcaagcaagaagagagcgg 613
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>dbj|AB020875.1| Homo sapiens genomic DNA of 9q32 anti-oncogene of flat epitherium
             cancer , segment 7/10
          Length = 100000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    tgacacataaaatttacatta 101
             |||||||||||||||||||||
Sbjct: 80055 tgacacataaaatttacatta 80035
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>gb|AC159407.1| Trypanosoma brucei chromosome 8 clone RPCI93-12O16, complete sequence
          Length = 161249

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 487   tcctcgtcactcacattctt 506
             ||||||||||||||||||||
Sbjct: 17977 tcctcgtcactcacattctt 17996
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>ref|NM_057200.1| Rattus norvegicus kinesin family member 1B (Kif1b), mRNA
          Length = 6032

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 447  ctgctggtactgcccgaagacctc 470
            ||||||||| ||||||||||||||
Sbjct: 3951 ctgctggtaatgcccgaagacctc 3928
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>gb|AY722648.1| Canine papillomavirus 2, complete genome
          Length = 8101

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  actagtgaaaacagtgccaa 120
            ||||||||||||||||||||
Sbjct: 2749 actagtgaaaacagtgccaa 2768
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>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence
          Length = 2481190

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 487    tcctcgtcactcacattctt 506
              ||||||||||||||||||||
Sbjct: 156697 tcctcgtcactcacattctt 156716
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>ref|XM_362984.1| Magnaporthe grisea 70-15 hypothetical protein (MG08453.4) partial cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  gatcctgatgaaaagcttca 292
            ||||||||||||||||||||
Sbjct: 1317 gatcctgatgaaaagcttca 1298
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>ref|XM_818469.1| Trypanosoma brucei TREU927 clone RPCI93-12O16 hypothetical protein
            (Tb927.8.540) partial mRNA
          Length = 7332

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 487  tcctcgtcactcacattctt 506
            ||||||||||||||||||||
Sbjct: 2270 tcctcgtcactcacattctt 2251
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>gb|AC011339.5| Homo sapiens chromosome 5 clone CTC-260J12, complete sequence
          Length = 152560

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ctgcaaaataaatgtagtaa 22
             ||||||||||||||||||||
Sbjct: 59935 ctgcaaaataaatgtagtaa 59916
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>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 62     acccagtggctcgctcaactgacacataaaat 93
              |||||||||| | ||||| |||||||||||||
Sbjct: 877025 acccagtggcccactcaaatgacacataaaat 877056
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      acataaaatttacattacta 104
               ||||||||||||||||||||
Sbjct: 7868134 acataaaatttacattacta 7868115
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>gb|AC018690.5| Homo sapiens BAC clone RP11-527J8 from 2, complete sequence
          Length = 233117

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 427    atgcaaagatgaatcagtttctgc 450
              ||||||||||||||||||| ||||
Sbjct: 192445 atgcaaagatgaatcagttgctgc 192422
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>gb|AC116917.2| Homo sapiens chromosome 5 clone RP11-756G12, complete sequence
          Length = 165764

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 3    ctgcaaaataaatgtagtaa 22
            ||||||||||||||||||||
Sbjct: 1626 ctgcaaaataaatgtagtaa 1607
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>gb|AC123544.4| Lemur catta clone LB2-246N5, complete sequence
          Length = 195323

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 62    acccagtggctcgctcaactgacacataaaat 93
             |||||||||| | ||||| |||||||||||||
Sbjct: 61764 acccagtggcccactcaaatgacacataaaat 61795
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>gb|AC010291.5|AC010291 Homo sapiens chromosome 5 clone CTB-130E24, complete sequence
          Length = 126169

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      ctgcaaaataaatgtagtaa 22
              ||||||||||||||||||||
Sbjct: 111387 ctgcaaaataaatgtagtaa 111368
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>dbj|AB120429.1| Rattus norvegicus mRNA for kinesin-family protein KIF1Bbeta3,
            complete cds
          Length = 5064

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 447  ctgctggtactgcccgaagacctc 470
            ||||||||| ||||||||||||||
Sbjct: 3210 ctgctggtaatgcccgaagacctc 3187
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>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0064I23
          Length = 161865

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 85     acataaaatttacattacta 104
              ||||||||||||||||||||
Sbjct: 115337 acataaaatttacattacta 115318
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>gb|AC171133.2| Helobdella robusta clone CH306-1A4, complete sequence
          Length = 120169

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 3     ctgcaaaataaatgtagtaa 22
             ||||||||||||||||||||
Sbjct: 90112 ctgcaaaataaatgtagtaa 90093
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>dbj|AB070355.1| Rattus norvegicus mRNA for kinesin-family protein 1Bp204, complete
            cds
          Length = 6032

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 447  ctgctggtactgcccgaagacctc 470
            ||||||||| ||||||||||||||
Sbjct: 3951 ctgctggtaatgcccgaagacctc 3928


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,364,712
Number of Sequences: 3902068
Number of extensions: 5364712
Number of successful extensions: 103731
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103481
Number of HSP's gapped (non-prelim): 250
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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