Clone Name | rbasd20n19 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SYDP_PHOLL (P60155) Protein syd | 30 | 2.1 | 2 | TULP2_MOUSE (P46686) Tubby-related protein 2 (Tubby-like protein... | 28 | 4.8 |
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>SYDP_PHOLL (P60155) Protein syd| Length = 184 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -2 Query: 216 IXXLLVNETRCWXK*WQXEEGGRXXESQVLGRPSPXV 106 + L N TRC+ WQ E G ++ G PSP + Sbjct: 5 VTEALSNFTRCYVDLWQKETGAPPASRELYGVPSPCI 41
>TULP2_MOUSE (P46686) Tubby-related protein 2 (Tubby-like protein 2) (P4-6| protein) (Fragment) Length = 564 Score = 28.5 bits (62), Expect = 4.8 Identities = 11/17 (64%), Positives = 13/17 (76%) Frame = -1 Query: 247 QSFXICXSSFDXXIACE 197 Q+F IC SSFD +ACE Sbjct: 548 QAFAICLSSFDGKLACE 564 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,409,909 Number of Sequences: 219361 Number of extensions: 295355 Number of successful extensions: 376 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 373 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 376 length of database: 80,573,946 effective HSP length: 59 effective length of database: 67,631,647 effective search space used: 1623159528 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)