Clone Name | rbasd20n17 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069830.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030M09, full insert sequence Length = 778 Score = 313 bits (158), Expect = 3e-82 Identities = 272/310 (87%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| | |||||||| |||| || |||||||||||||| ||| Sbjct: 494 aatcaattgaaactagggcaaacaggtccctttgacaaaccgaggcgaacctccattccg 435 Query: 194 tggtgcatgtccggtacgcgcaggctgtcagagtcttggggcaagttaaggtaatcttca 253 ||||||||||| || | || | ||| ||||| ||||||||||||||||| ||||||||| Sbjct: 434 tggtgcatgtcgggagcacggaagctttcagaatcttggggcaagttaagataatcttca 375 Query: 254 aatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagatgatggcaat 313 || ||||||||||| |||||||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 374 aacccaaaatcatctaaggaaccagtcagtgcctcatatcctagcatagatgacggcaat 315 Query: 314 gcacctgggggcctttggaacctggagaggatctgggcgtcgagatccttgcggatgttg 373 ||||| ||||||||||||||| |||||||||| ||||| || |||||||||||||||||| Sbjct: 314 gcaccagggggcctttggaacttggagaggatttgggcatcaagatccttgcggatgttg 255 Query: 374 aaggcggatccgtagatggcctcggtcccgaacttcttcttgtcgtcccagaacttggac 433 |||||||||||||||||||| || | |||||| |||||||||| |||||||||||| Sbjct: 254 aaggcggatccgtagatggcttccgcgccgaacctcttcttgtccgcccagaacttggca 195 Query: 434 tccttgtgga 443 |||||||||| Sbjct: 194 tccttgtgga 185
>gb|AY105712.1| Zea mays PCO130616 mRNA sequence Length = 981 Score = 303 bits (153), Expect = 3e-79 Identities = 264/301 (87%) Strand = Plus / Minus Query: 136 tcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtg 195 |||| |||| || |||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct: 510 tcaactgaagctagggcagataggtcccttggacaaaccaaggcgaacctccattccgtg 451 Query: 196 gtgcatgtccggtacgcgcaggctgtcagagtcttggggcaagttaaggtaatcttcaaa 255 ||||||||| ||| || | | ||||| ||||| |||| |||||| ||||||||||| Sbjct: 450 gtgcatgtcaggttgacggaaaccttcagaatcttgaggcatgttaagataatcttcaaa 391 Query: 256 tccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagatgatggcaatgc 315 ||||||||||| | ||||||||||| |||||||||||| |||| |||||||||||| || Sbjct: 390 accaaaatcatctagggaacctgtcagtgcctcatatccaagcagagatgatggcaaagc 331 Query: 316 acctgggggcctttggaacctggagaggatctgggcgtcgagatccttgcggatgttgaa 375 ||| ||||||||||||||||| |||||||| ||||| |||||||||||||||||||| || Sbjct: 330 accagggggcctttggaaccttgagaggatttgggcatcgagatccttgcggatgttcaa 271 Query: 376 ggcggatccgtagatggcctcggtcccgaacttcttcttgtcgtcccagaacttggactc 435 ||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| ||| Sbjct: 270 ggcggatccgtagatggcctctgtcccaaacttcttcttgtccgcccagaacttggcctc 211 Query: 436 c 436 | Sbjct: 210 c 210
>gb|AY104566.1| Zea mays PCO130617 mRNA sequence Length = 1029 Score = 297 bits (150), Expect = 2e-77 Identities = 264/302 (87%) Strand = Plus / Minus Query: 136 tcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtg 195 ||||||||| || || ||||| ||||||||||||| ||||||||||||||||| || || Sbjct: 777 tcaattgaagctaggacagataggtcccttggacaaaccaaggcgaacctccattccatg 718 Query: 196 gtgcatgtccggtacgcgcaggctgtcagagtcttggggcaagttaaggtaatcttcaaa 255 ||||||||| ||| || | |||||||| || || |||| |||||| ||||||||||| Sbjct: 717 gtgcatgtcaggttgacggaaactgtcagaatcatgaggcatgttaagataatcttcaaa 658 Query: 256 tccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagatgatggcaatgc 315 |||||||||||||| ||||||||||| |||||| ||||| |||| |||||| ||||| || Sbjct: 657 tccaaaatcatccagggaacctgtcagtgcctcgtatccaagcagagatgacggcaaagc 598 Query: 316 acctgggggcctttggaacctggagaggatctgggcgtcgagatccttgcggatgttgaa 375 ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 597 accagggggcctttggaacctggagaggatttgggcatcgagatccttgcggatgttgag 538 Query: 376 ggcggatccgtagatggcctcggtcccgaacttcttcttgtcgtcccagaacttggactc 435 ||||||||| || ||||| || |||||||||||||||||||| |||||||||||| ||| Sbjct: 537 ggcggatccatatatggcatctgtcccgaacttcttcttgtccgcccagaacttggtctc 478 Query: 436 ct 437 || Sbjct: 477 ct 476
>gb|BT016426.1| Zea mays clone Contig259 mRNA sequence Length = 643 Score = 295 bits (149), Expect = 6e-77 Identities = 263/301 (87%) Strand = Plus / Minus Query: 136 tcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtg 195 ||||||||| || || ||||| ||||||||||||| ||||||||||||||||| || || Sbjct: 488 tcaattgaagctaggacagataggtcccttggacaaaccaaggcgaacctccattccatg 429 Query: 196 gtgcatgtccggtacgcgcaggctgtcagagtcttggggcaagttaaggtaatcttcaaa 255 ||||||||| ||| || | |||||||| || || |||| |||||| ||||||||||| Sbjct: 428 gtgcatgtcaggttgacggaaactgtcagaatcatgaggcatgttaagataatcttcaaa 369 Query: 256 tccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagatgatggcaatgc 315 |||||||||||||| ||||||||||| |||||| ||||| |||| |||||| ||||| || Sbjct: 368 tccaaaatcatccagggaacctgtcagtgcctcgtatccaagcagagatgacggcaaagc 309 Query: 316 acctgggggcctttggaacctggagaggatctgggcgtcgagatccttgcggatgttgaa 375 ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 308 accagggggcctttggaacctggagaggatttgggcatcgagatccttgcggatgttgag 249 Query: 376 ggcggatccgtagatggcctcggtcccgaacttcttcttgtcgtcccagaacttggactc 435 ||||||||| || ||||| || |||||||||||||||||||| |||||||||||| ||| Sbjct: 248 ggcggatccatatatggcatctgtcccgaacttcttcttgtccgcccagaacttggtctc 189 Query: 436 c 436 | Sbjct: 188 c 188
>ref|XM_463066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 846 Score = 270 bits (136), Expect = 4e-69 Identities = 229/260 (88%) Strand = Plus / Minus Query: 184 ctccatcccgtggtgcatgtccggtacgcgcaggctgtcagagtcttggggcaagttaag 243 |||||| |||||||||||||| || | | | ||||||||| |||||||||||||| || Sbjct: 378 ctccattccgtggtgcatgtctggagcatggaagctgtcagaatcttggggcaagttgag 319 Query: 244 gtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcataga 303 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| |||||||| Sbjct: 318 ataatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcataga 259 Query: 304 tgatggcaatgcacctgggggcctttggaacctggagaggatctgggcgtcgagatcctt 363 ||||||||||||||| ||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 258 tgatggcaatgcaccagggggcctttggaacttggagaggatttgggcatcgagatcctt 199 Query: 364 gcggatgttgaaggcggatccgtagatggcctcggtcccgaacttcttcttgtcgtccca 423 |||||||||||| ||||||||||||||||| || | ||||||| ||||||| || |||| Sbjct: 198 gcggatgttgaaagcggatccgtagatggcttccgccccgaacctcttcttatccgccca 139 Query: 424 gaacttggactccttgtgga 443 |||||||| ||||||||||| Sbjct: 138 gaacttggcctccttgtgga 119
>dbj|AK072342.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052N08, full insert sequence Length = 3232 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 373 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 314 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctggagaggatctgggcgtcga 356 |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||| || | Sbjct: 313 gcatagatgacggcaatgcaccagggggcctttggaacttggagaggatttgggcatcaa 254 Query: 357 gatccttgcggatgttgaaggcggatccgtagatggcctcggtcccgaacttcttcttgt 416 ||||||||||||||||||||||||||||||||||||| || | |||||| ||||||||| Sbjct: 253 gatccttgcggatgttgaaggcggatccgtagatggcttccgcgccgaacctcttcttgt 194 Query: 417 cgtcccagaacttggactccttgtgga 443 | |||||||||||| ||||||||||| Sbjct: 193 ccgcccagaacttggcctccttgtgga 167
>dbj|AK072332.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038L20, full insert sequence Length = 4792 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 359 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 300 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctggagaggatctgggcgtcga 356 |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||| || | Sbjct: 299 gcatagatgacggcaatgcaccagggggcctttggaacttggagaggatttgggcatcaa 240 Query: 357 gatccttgcggatgttgaaggcggatccgtagatggcctcggtcccgaacttcttcttgt 416 ||||||||||||||||||||||||||||||||||||| || | |||||| ||||||||| Sbjct: 239 gatccttgcggatgttgaaggcggatccgtagatggcttccgcgccgaacctcttcttgt 180 Query: 417 cgtcccagaacttggactccttgtgga 443 | |||||||||||| ||||||||||| Sbjct: 179 ccgcccagaacttggcctccttgtgga 153
>dbj|AK067815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118P06, full insert sequence Length = 3020 Score = 252 bits (127), Expect = 9e-64 Identities = 187/207 (90%) Strand = Plus / Minus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 358 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 299 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctggagaggatctgggcgtcga 356 |||||||||| ||||||||||| ||||||||||||||| |||||||||| ||||| || | Sbjct: 298 gcatagatgacggcaatgcaccagggggcctttggaacttggagaggatttgggcatcaa 239 Query: 357 gatccttgcggatgttgaaggcggatccgtagatggcctcggtcccgaacttcttcttgt 416 ||||||||||||||||||||||||||||||||||||| || | |||||| ||||||||| Sbjct: 238 gatccttgcggatgttgaaggcggatccgtagatggcttccgcgccgaacctcttcttgt 179 Query: 417 cgtcccagaacttggactccttgtgga 443 | |||||||||||| ||||||||||| Sbjct: 178 ccgcccagaacttggcctccttgtgga 152
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 34172866 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 34172925 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 34172926 gcatagatgacggcaatgcaccagggggcctttggaacctgg 34172967 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 34143149 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 34143208 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 34143209 gcatagatgacggcaatgcaccagggggcctttggaacctgg 34143250 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 34118597 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 34118656 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 34118657 gcatagatgacggcaatgcaccagggggcctttggaacctgg 34118698 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 34095410 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 34095469 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 34095470 gcatagatgacggcaatgcaccagggggcctttggaacctgg 34095511 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 34173720 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 34173779 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 34173780 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 34173821 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 34144003 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 34144062 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 34144063 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 34144104 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 34119451 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 34119510 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 34119511 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 34119552 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 34096277 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 34096336 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttgg 431 | | |||||| |||||||||| |||||||||||| Sbjct: 34096337 ccgcgccgaacctcttcttgtccgcccagaacttgg 34096372 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| | |||||||| |||| || |||||||||||||| ||| Sbjct: 34094615 aatcaattgaaactagggcaaacaggtccctttgacaaaccgaggcgaacctccattccg 34094674 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 34094675 tggtgcatgtc 34094685 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 27264326 ggtcccgaacttcttcttgt 27264307
>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0032L17 Length = 165808 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 100380 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 100439 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 100440 gcatagatgacggcaatgcaccagggggcctttggaacctgg 100481 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 70663 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 70722 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 70723 gcatagatgacggcaatgcaccagggggcctttggaacctgg 70764 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 46111 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 46170 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 46171 gcatagatgacggcaatgcaccagggggcctttggaacctgg 46212 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 22924 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 22983 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 22984 gcatagatgacggcaatgcaccagggggcctttggaacctgg 23025 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 101234 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 101293 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 101294 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 101335 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 71517 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 71576 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 71577 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 71618 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 46965 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 47024 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 47025 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 47066 Score = 111 bits (56), Expect = 2e-21 Identities = 86/96 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 23791 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 23850 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttgg 431 | | |||||| |||||||||| |||||||||||| Sbjct: 23851 ccgcgccgaacctcttcttgtccgcccagaacttgg 23886 Score = 69.9 bits (35), Expect = 7e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| | |||||||| |||| || |||||||||||||| ||| Sbjct: 22129 aatcaattgaaactagggcaaacaggtccctttgacaaaccgaggcgaacctccattccg 22188 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 22189 tggtgcatgtc 22199
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatccca 296 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| | Sbjct: 8139 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatccta 8198 Query: 297 gcatagatgatggcaatgcacctgggggcctttggaacctgg 338 |||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 8199 gcatagatgacggcaatgcaccagggggcctttggaacctgg 8240 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Plus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| || |||||||||||||||||||||||||||||||||||||| | Sbjct: 8993 tggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggctt 9052 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | |||||| |||||||||| |||||||||||| ||||| Sbjct: 9053 ccgcgccgaacctcttcttgtccgcccagaacttggcctcct 9094
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 21300317 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 21300258 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 21300257 gatggcaatgcaccagggggcctttggaacctg 21300225 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 21298449 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 21298390 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 21298389 ccgccccgaacctcttcttatccgcccagaacttggcctcct 21298348 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||| Sbjct: 21301089 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggcgaacctccattccg 21301030 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 21301029 tggtgcatgtc 21301019
>gb|AC133333.5| Oryza sativa chromosome 3 BAC OJ1785_A05 genomic sequence, complete sequence Length = 174910 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 156232 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 156173 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 156172 gatggcaatgcaccagggggcctttggaacctg 156140 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 154364 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 154305 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 154304 ccgccccgaacctcttcttatccgcccagaacttggcctcct 154263 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||| Sbjct: 157004 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggcgaacctccattccg 156945 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 156944 tggtgcatgtc 156934
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 8584417 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 8584358 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 8584357 gatggcaatgcaccagggggcctttggaacctg 8584325 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 8582551 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 8582492 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 8582491 ccgccccgaacctcttcttatccgcccagaacttggcctcct 8582450 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||||| ||| Sbjct: 8585191 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggagaacctccattccg 8585132 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 8585131 tggtgcatgtc 8585121
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 21293346 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 21293287 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 21293286 gatggcaatgcaccagggggcctttggaacctg 21293254 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 21291478 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 21291419 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 21291418 ccgccccgaacctcttcttatccgcccagaacttggcctcct 21291377 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| ||||||||||||||||| ||| Sbjct: 21294118 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggcgaacctccattccg 21294059 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 21294058 tggtgcatgtc 21294048
>dbj|AP005782.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0079G12 Length = 139796 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 105627 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 105568 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 105567 gatggcaatgcaccagggggcctttggaacctg 105535 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 103761 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 103702 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 103701 ccgccccgaacctcttcttatccgcccagaacttggcctcct 103660 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||||| ||| Sbjct: 106401 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggagaacctccattccg 106342 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 106341 tggtgcatgtc 106331
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0057D11 Length = 190790 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcccagcatagat 304 ||||||||||| || ||||||||||||||||| |||| ||||| ||||| ||||||||| Sbjct: 14213 taatcttcaaacccgaaatcatccaaggaaccagtcagcgcctcgtatcctagcatagat 14154 Query: 305 gatggcaatgcacctgggggcctttggaacctg 337 |||||||||||||| |||||||||||||||||| Sbjct: 14153 gatggcaatgcaccagggggcctttggaacctg 14121 Score = 115 bits (58), Expect = 1e-22 Identities = 91/102 (89%) Strand = Plus / Minus Query: 336 tggagaggatctgggcgtcgagatccttgcggatgttgaaggcggatccgtagatggcct 395 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 12347 tggagaggatttgggcatcgagatccttgcggatgttgaaagcggatccgtagatggctt 12288 Query: 396 cggtcccgaacttcttcttgtcgtcccagaacttggactcct 437 | | ||||||| ||||||| || |||||||||||| ||||| Sbjct: 12287 ccgccccgaacctcttcttatccgcccagaacttggcctcct 12246 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 134 aatcaattgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccg 193 |||||||||||||| ||||| || |||||||| |||| |||||| |||||||||| ||| Sbjct: 14987 aatcaattgaaactagggcaaatcggtccctttgacaaaccaaggagaacctccattccg 14928 Query: 194 tggtgcatgtc 204 ||||||||||| Sbjct: 14927 tggtgcatgtc 14917
>dbj|AK099813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099K24, full insert sequence Length = 2648 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 237 agttaaggtaatcttcaaatccaaaatcatccaaggaacctgtcattgcctcatatcc 294 ||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| Sbjct: 61 agttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatcc 4
>emb|AJ851434.1| Gallus gallus partial mRNA for hypothetical protein, clone 2l15 Length = 2918 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 taatcttcaaatccaaaatcatc 267 ||||||||||||||||||||||| Sbjct: 279 taatcttcaaatccaaaatcatc 257
>ref|NM_105394.2| Arabidopsis thaliana unknown protein AT1G67250 mRNA, complete cds Length = 677 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 506 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 449
>gb|BT011933.1| Arabidopsis thaliana At1g67250 mRNA sequence Length = 423 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 418 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 361
>gb|AY044313.1| Arabidopsis thaliana Unknown protein (F1N21.15) mRNA, complete cds Length = 474 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 421 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 364
>gb|AC092828.16| Homo sapiens 12 BAC RP11-282K24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 127836 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 ttctcatgtttcacaaatccat 62 |||||||||||||||||||||| Sbjct: 101925 ttctcatgtttcacaaatccat 101904
>gb|BT003679.1| Arabidopsis thaliana At1g67250 mRNA, complete cds Length = 426 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 421 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 364
>gb|AY086781.1| Arabidopsis thaliana clone 27632 mRNA, complete sequence Length = 604 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 489 tgaaacttgggtaaatcggtcccttcgagatgccaagacgaacttccatcccgtggtg 432
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 ggcgtcgagatccttgcggatg 370 |||||||||||||||||||||| Sbjct: 5003984 ggcgtcgagatccttgcggatg 5004005
>gb|AC002130.2|AC002130 Genomic sequence for Arabidopsis thaliana BAC F1N21 from chromosome I, complete sequence Length = 114738 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Plus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 26684 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 26741
>dbj|AK117205.1| Arabidopsis thaliana At1g67250 mRNA for unknown protein, complete cds, clone: RAFL16-75-L12 Length = 583 Score = 44.1 bits (22), Expect = 0.39 Identities = 49/58 (84%) Strand = Plus / Minus Query: 141 tgaaactggggcagatgggtcccttggacaggccaaggcgaacctccatcccgtggtg 198 ||||||| ||| | || |||||||| || | |||||| ||||| |||||||||||||| Sbjct: 501 tgaaacttgggtaaatcggtccctttgagatgccaagacgaacttccatcccgtggtg 444
>dbj|AP006703.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01O03, TM0588b, complete sequence Length = 45450 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 173 ccaaggcgaacctccatcccgtggtgcatgtcc 205 ||||||||||| |||||||| || ||||||||| Sbjct: 33330 ccaaggcgaacttccatcccatgatgcatgtcc 33298
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 tcttcaaatccaaaatcatc 267 |||||||||||||||||||| Sbjct: 1149724 tcttcaaatccaaaatcatc 1149743
>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence Length = 244220 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 atcttcaaatccaaaatcat 266 |||||||||||||||||||| Sbjct: 201817 atcttcaaatccaaaatcat 201798
>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence Length = 173357 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 atcttcaaatccaaaatcat 266 |||||||||||||||||||| Sbjct: 51656 atcttcaaatccaaaatcat 51675
>gb|AC083890.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-284P20, complete sequence Length = 203967 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 cctttggaacctggagagga 344 |||||||||||||||||||| Sbjct: 21772 cctttggaacctggagagga 21791
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11, complete sequence Length = 147806 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gatccttgcggatgttgaag 376 |||||||||||||||||||| Sbjct: 113776 gatccttgcggatgttgaag 113795
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gatccttgcggatgttgaag 376 |||||||||||||||||||| Sbjct: 28106551 gatccttgcggatgttgaag 28106570
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0684A08 Length = 137841 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 114997 ggtcccgaacttcttcttgt 114978
>dbj|AK119517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C05, full insert sequence Length = 2055 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 991 ggtcccgaacttcttcttgt 972
>dbj|AK100650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D06, full insert sequence Length = 2089 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 988 ggtcccgaacttcttcttgt 969
>dbj|AK100585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B08, full insert sequence Length = 2977 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 2049 ggtcccgaacttcttcttgt 2030
>dbj|AK064827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F07, full insert sequence Length = 1984 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 987 ggtcccgaacttcttcttgt 968
>dbj|AK061743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F02, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 991 ggtcccgaacttcttcttgt 972
>dbj|AK061649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C02, full insert sequence Length = 1697 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggtcccgaacttcttcttgt 416 |||||||||||||||||||| Sbjct: 614 ggtcccgaacttcttcttgt 595
>gb|U07366.1|CAU07366 Candida albicans translation initiation factor eIF-5A (TIF51) gene, complete cds Length = 1993 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 taatacatgggtggaatcaa 139 |||||||||||||||||||| Sbjct: 986 taatacatgggtggaatcaa 1005 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,390,844 Number of Sequences: 3902068 Number of extensions: 3390844 Number of successful extensions: 59699 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59516 Number of HSP's gapped (non-prelim): 180 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)