ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21c14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 349 7e-93
2dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D... 349 7e-93
3dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D... 349 7e-93
4dbj|AK099571.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 7e-93
5ref|NM_191261.1| Oryza sativa (japonica cultivar-group), predic... 198 2e-47
6ref|XM_507540.1| PREDICTED Oryza sativa (japonica cultivar-group... 88 4e-14
7ref|XM_468183.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
8ref|XM_507017.2| PREDICTED Oryza sativa (japonica cultivar-group... 88 4e-14
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
10dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
11dbj|AK104526.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
12dbj|AK104117.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
13dbj|AK061452.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
14emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chr... 44 0.57
15emb|AL355607.10| Human DNA sequence from clone RP11-367F23 on ch... 42 2.2
16gb|AC132872.17| Homo sapiens chromosome 17, clone RP13-516M14, c... 42 2.2
17gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, com... 42 2.2
18gb|AC132938.9| Homo sapiens chromosome 17, clone RP13-20L14, com... 42 2.2
19dbj|BS000076.1| Pan troglodytes chromosome 22 clone:PTB-096O09, ... 42 2.2
20dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07,... 42 2.2
21dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.2
22dbj|AP000951.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 2.2
23gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.9
24ref|XM_389780.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 8.9
25ref|XM_571336.1| Cryptococcus neoformans var. neoformans JEC21 p... 40 8.9
26emb|AL353732.14| Human DNA sequence from clone RP11-354P17 on ch... 40 8.9
27emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chr... 40 8.9
28emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein beta-... 40 8.9
29emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chro... 40 8.9
30emb|CR376737.4| Zebrafish DNA sequence from clone CH211-14G13 in... 40 8.9
31gb|AF098973.1|AF098973 Filobasidiella neoformans var. neoformans... 40 8.9
32gb|AF098972.1|AF098972 Cryptococcus neoformans var. grubii phosp... 40 8.9
33gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, comple... 40 8.9
34emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chro... 40 8.9

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  349 bits (176), Expect = 7e-93
 Identities = 437/524 (83%)
 Strand = Plus / Plus

                                                                            
Query: 73       atgtgtgaagcatggtgaatgcaaatataccatgtgccatctatcttctcgaagacgttg 132
                |||||||| ||||||||||  || ||   |||||||||||| | ||||||||||||||| 
Sbjct: 31601666 atgtgtgatgcatggtgaacacacatgcgccatgtgccatcaaccttctcgaagacgttt 31601725

                                                                            
Query: 133      gtggcaatttgcttcccccaagattttcctttggtcttaaccaactccaagcatgtaaca 192
                ||||| | |||||||||||| | | ||||||||||||||||||  ||||||||||| || 
Sbjct: 31601726 gtggcgacttgcttcccccatgttcttcctttggtcttaaccacttccaagcatgtgacg 31601785

                                                                            
Query: 193      taaccaaggtcaccacgcacatgaacctctatgttcttaagctcaatgtttagagggaac 252
                ||||||||||||||| |||||||||||||||  || || || ||||||||||| ||||||
Sbjct: 31601786 taaccaaggtcaccatgcacatgaacctctacatttttcagatcaatgtttagtgggaac 31601845

                                                                            
Query: 253      tcataatccgcgttgcaaaccatctcccagctttgcaagaccacatcgtaaccggatatc 312
                |||||||| |||   || ||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 31601846 tcataatctgcgccacataccatctcccagctttgcatgaccacgtcataacctgatatc 31601905

                                                                            
Query: 313      cgacctgccccaggatggacaacatacacatagtctcctttagcccagatagagttcatt 372
                ||||| ||  ||||||||| |||||| |||| ||| || |||||||| | ||||| ||| 
Sbjct: 31601906 cgacccgcagcaggatggataacatatacatggtcacccttagcccataaagagtacatc 31601965

                                                                            
Query: 373      gcagtaaaatctccattcttgaaagcgttgtagaatcgtgtatttgctgcaaggacggaa 432
                || | || ||| |||||||||||||| ||||| || ||||| ||||||||||||| ||||
Sbjct: 31601966 gctgcaagatcgccattcttgaaagcattgtaaaaccgtgtgtttgctgcaaggagggaa 31602025

                                                                            
Query: 433      gcttcagtatcctcatggaggacgtgcagatcatcccggattttggcagcacgggcataa 492
                ||||  ||||| |||||||||| | ||||||||||||  || || ||||| |||| ||||
Sbjct: 31602026 gctttggtatcttcatggaggatgcgcagatcatcccttatctttgcagcccgggaataa 31602085

                                                                            
Query: 493      tcttcttcccggatagccctgtccaaattacgctgaagggtttcttcgtcagctaactcg 552
                ||||||||| |||| ||  | |  ||||||||||| |||||||| ||||||  | ||   
Sbjct: 31602086 tcttcttcctggatggctgtctgtaaattacgctgcagggtttcctcgtcaattgacaaa 31602145

                                                            
Query: 553      tcttcagtttttggatagccatcagcatccccacttttaacatg 596
                ||||||||  |||| || ||||||||||| ||||||||||||||
Sbjct: 31602146 tcttcagtcgttgggtaaccatcagcatctccacttttaacatg 31602189



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>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0503C12
          Length = 147180

 Score =  349 bits (176), Expect = 7e-93
 Identities = 437/524 (83%)
 Strand = Plus / Plus

                                                                         
Query: 73    atgtgtgaagcatggtgaatgcaaatataccatgtgccatctatcttctcgaagacgttg 132
             |||||||| ||||||||||  || ||   |||||||||||| | ||||||||||||||| 
Sbjct: 15398 atgtgtgatgcatggtgaacacacatgcgccatgtgccatcaaccttctcgaagacgttt 15457

                                                                         
Query: 133   gtggcaatttgcttcccccaagattttcctttggtcttaaccaactccaagcatgtaaca 192
             ||||| | |||||||||||| | | ||||||||||||||||||  ||||||||||| || 
Sbjct: 15458 gtggcgacttgcttcccccatgttcttcctttggtcttaaccacttccaagcatgtgacg 15517

                                                                         
Query: 193   taaccaaggtcaccacgcacatgaacctctatgttcttaagctcaatgtttagagggaac 252
             ||||||||||||||| |||||||||||||||  || || || ||||||||||| ||||||
Sbjct: 15518 taaccaaggtcaccatgcacatgaacctctacatttttcagatcaatgtttagtgggaac 15577

                                                                         
Query: 253   tcataatccgcgttgcaaaccatctcccagctttgcaagaccacatcgtaaccggatatc 312
             |||||||| |||   || ||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 15578 tcataatctgcgccacataccatctcccagctttgcatgaccacgtcataacctgatatc 15637

                                                                         
Query: 313   cgacctgccccaggatggacaacatacacatagtctcctttagcccagatagagttcatt 372
             ||||| ||  ||||||||| |||||| |||| ||| || |||||||| | ||||| ||| 
Sbjct: 15638 cgacccgcagcaggatggataacatatacatggtcacccttagcccataaagagtacatc 15697

                                                                         
Query: 373   gcagtaaaatctccattcttgaaagcgttgtagaatcgtgtatttgctgcaaggacggaa 432
             || | || ||| |||||||||||||| ||||| || ||||| ||||||||||||| ||||
Sbjct: 15698 gctgcaagatcgccattcttgaaagcattgtaaaaccgtgtgtttgctgcaaggagggaa 15757

                                                                         
Query: 433   gcttcagtatcctcatggaggacgtgcagatcatcccggattttggcagcacgggcataa 492
             ||||  ||||| |||||||||| | ||||||||||||  || || ||||| |||| ||||
Sbjct: 15758 gctttggtatcttcatggaggatgcgcagatcatcccttatctttgcagcccgggaataa 15817

                                                                         
Query: 493   tcttcttcccggatagccctgtccaaattacgctgaagggtttcttcgtcagctaactcg 552
             ||||||||| |||| ||  | |  ||||||||||| |||||||| ||||||  | ||   
Sbjct: 15818 tcttcttcctggatggctgtctgtaaattacgctgcagggtttcctcgtcaattgacaaa 15877

                                                         
Query: 553   tcttcagtttttggatagccatcagcatccccacttttaacatg 596
             ||||||||  |||| || ||||||||||| ||||||||||||||
Sbjct: 15878 tcttcagtcgttgggtaaccatcagcatctccacttttaacatg 15921



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>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435B05
          Length = 150997

 Score =  349 bits (176), Expect = 7e-93
 Identities = 437/524 (83%)
 Strand = Plus / Plus

                                                                          
Query: 73     atgtgtgaagcatggtgaatgcaaatataccatgtgccatctatcttctcgaagacgttg 132
              |||||||| ||||||||||  || ||   |||||||||||| | ||||||||||||||| 
Sbjct: 114689 atgtgtgatgcatggtgaacacacatgcgccatgtgccatcaaccttctcgaagacgttt 114748

                                                                          
Query: 133    gtggcaatttgcttcccccaagattttcctttggtcttaaccaactccaagcatgtaaca 192
              ||||| | |||||||||||| | | ||||||||||||||||||  ||||||||||| || 
Sbjct: 114749 gtggcgacttgcttcccccatgttcttcctttggtcttaaccacttccaagcatgtgacg 114808

                                                                          
Query: 193    taaccaaggtcaccacgcacatgaacctctatgttcttaagctcaatgtttagagggaac 252
              ||||||||||||||| |||||||||||||||  || || || ||||||||||| ||||||
Sbjct: 114809 taaccaaggtcaccatgcacatgaacctctacatttttcagatcaatgtttagtgggaac 114868

                                                                          
Query: 253    tcataatccgcgttgcaaaccatctcccagctttgcaagaccacatcgtaaccggatatc 312
              |||||||| |||   || ||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 114869 tcataatctgcgccacataccatctcccagctttgcatgaccacgtcataacctgatatc 114928

                                                                          
Query: 313    cgacctgccccaggatggacaacatacacatagtctcctttagcccagatagagttcatt 372
              ||||| ||  ||||||||| |||||| |||| ||| || |||||||| | ||||| ||| 
Sbjct: 114929 cgacccgcagcaggatggataacatatacatggtcacccttagcccataaagagtacatc 114988

                                                                          
Query: 373    gcagtaaaatctccattcttgaaagcgttgtagaatcgtgtatttgctgcaaggacggaa 432
              || | || ||| |||||||||||||| ||||| || ||||| ||||||||||||| ||||
Sbjct: 114989 gctgcaagatcgccattcttgaaagcattgtaaaaccgtgtgtttgctgcaaggagggaa 115048

                                                                          
Query: 433    gcttcagtatcctcatggaggacgtgcagatcatcccggattttggcagcacgggcataa 492
              ||||  ||||| |||||||||| | ||||||||||||  || || ||||| |||| ||||
Sbjct: 115049 gctttggtatcttcatggaggatgcgcagatcatcccttatctttgcagcccgggaataa 115108

                                                                          
Query: 493    tcttcttcccggatagccctgtccaaattacgctgaagggtttcttcgtcagctaactcg 552
              ||||||||| |||| ||  | |  ||||||||||| |||||||| ||||||  | ||   
Sbjct: 115109 tcttcttcctggatggctgtctgtaaattacgctgcagggtttcctcgtcaattgacaaa 115168

                                                          
Query: 553    tcttcagtttttggatagccatcagcatccccacttttaacatg 596
              ||||||||  |||| || ||||||||||| ||||||||||||||
Sbjct: 115169 tcttcagtcgttgggtaaccatcagcatctccacttttaacatg 115212



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>dbj|AK099571.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013035E10, full
           insert sequence
          Length = 1066

 Score =  349 bits (176), Expect = 7e-93
 Identities = 437/524 (83%)
 Strand = Plus / Minus

                                                                       
Query: 73  atgtgtgaagcatggtgaatgcaaatataccatgtgccatctatcttctcgaagacgttg 132
           |||||||| ||||||||||  || ||   |||||||||||| | ||||||||||||||| 
Sbjct: 765 atgtgtgatgcatggtgaacacacatgcgccatgtgccatcaaccttctcgaagacgttt 706

                                                                       
Query: 133 gtggcaatttgcttcccccaagattttcctttggtcttaaccaactccaagcatgtaaca 192
           ||||| | |||||||||||| | | ||||||||||||||||||  ||||||||||| || 
Sbjct: 705 gtggcgacttgcttcccccatgttcttcctttggtcttaaccacttccaagcatgtgacg 646

                                                                       
Query: 193 taaccaaggtcaccacgcacatgaacctctatgttcttaagctcaatgtttagagggaac 252
           ||||||||||||||| |||||||||||||||  || || || ||||||||||| ||||||
Sbjct: 645 taaccaaggtcaccatgcacatgaacctctacatttttcagatcaatgtttagtgggaac 586

                                                                       
Query: 253 tcataatccgcgttgcaaaccatctcccagctttgcaagaccacatcgtaaccggatatc 312
           |||||||| |||   || ||||||||||||||||||| |||||| || ||||| ||||||
Sbjct: 585 tcataatctgcgccacataccatctcccagctttgcatgaccacgtcataacctgatatc 526

                                                                       
Query: 313 cgacctgccccaggatggacaacatacacatagtctcctttagcccagatagagttcatt 372
           ||||| ||  ||||||||| |||||| |||| ||| || |||||||| | ||||| ||| 
Sbjct: 525 cgacccgcagcaggatggataacatatacatggtcacccttagcccataaagagtacatc 466

                                                                       
Query: 373 gcagtaaaatctccattcttgaaagcgttgtagaatcgtgtatttgctgcaaggacggaa 432
           || | || ||| |||||||||||||| ||||| || ||||| ||||||||||||| ||||
Sbjct: 465 gctgcaagatcgccattcttgaaagcattgtaaaaccgtgtgtttgctgcaaggagggaa 406

                                                                       
Query: 433 gcttcagtatcctcatggaggacgtgcagatcatcccggattttggcagcacgggcataa 492
           ||||  ||||| |||||||||| | ||||||||||||  || || ||||| |||| ||||
Sbjct: 405 gctttggtatcttcatggaggatgcgcagatcatcccttatctttgcagcccgggaataa 346

                                                                       
Query: 493 tcttcttcccggatagccctgtccaaattacgctgaagggtttcttcgtcagctaactcg 552
           ||||||||| |||| ||  | |  ||||||||||| |||||||| ||||||  | ||   
Sbjct: 345 tcttcttcctggatggctgtctgtaaattacgctgcagggtttcctcgtcaattgacaaa 286

                                                       
Query: 553 tcttcagtttttggatagccatcagcatccccacttttaacatg 596
           ||||||||  |||| || ||||||||||| ||||||||||||||
Sbjct: 285 tcttcagtcgttgggtaaccatcagcatctccacttttaacatg 242



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>ref|NM_191261.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score =  198 bits (100), Expect = 2e-47
 Identities = 268/324 (82%)
 Strand = Plus / Minus

                                                                       
Query: 273 catctcccagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggac 332
           ||||||||||||||||| |||||| || ||||| ||||||||||| ||  ||||||||| 
Sbjct: 498 catctcccagctttgcatgaccacgtcataacctgatatccgacccgcagcaggatggat 439

                                                                       
Query: 333 aacatacacatagtctcctttagcccagatagagttcattgcagtaaaatctccattctt 392
           |||||| |||| ||| || |||||||| | ||||| ||| || | || ||| ||||||||
Sbjct: 438 aacatatacatggtcacccttagcccataaagagtacatcgctgcaagatcgccattctt 379

                                                                       
Query: 393 gaaagcgttgtagaatcgtgtatttgctgcaaggacggaagcttcagtatcctcatggag 452
           |||||| ||||| || ||||| ||||||||||||| ||||||||  ||||| ||||||||
Sbjct: 378 gaaagcattgtaaaaccgtgtgtttgctgcaaggagggaagctttggtatcttcatggag 319

                                                                       
Query: 453 gacgtgcagatcatcccggattttggcagcacgggcataatcttcttcccggatagccct 512
           || | ||||||||||||  || || ||||| |||| ||||||||||||| |||| ||  |
Sbjct: 318 gatgcgcagatcatcccttatctttgcagcccgggaataatcttcttcctggatggctgt 259

                                                                       
Query: 513 gtccaaattacgctgaagggtttcttcgtcagctaactcgtcttcagtttttggatagcc 572
            |  ||||||||||| |||||||| ||||||  | ||   ||||||||  |||| || ||
Sbjct: 258 ctgtaaattacgctgcagggtttcctcgtcaattgacaaatcttcagtcgttgggtaacc 199

                                   
Query: 573 atcagcatccccacttttaacatg 596
           ||||||||| ||||||||||||||
Sbjct: 198 atcagcatctccacttttaacatg 175



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>ref|XM_507540.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.23
           mRNA
          Length = 984

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 644 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 585

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 584 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 525

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 524 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 465

               
Query: 340 acat 343
           ||||
Sbjct: 464 acat 461



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>ref|XM_468183.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 972

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 623 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 564

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 563 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 504

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 503 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 444

               
Query: 340 acat 343
           ||||
Sbjct: 443 acat 440



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>ref|XM_507017.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.23
           mRNA
          Length = 1044

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 637 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 578

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 577 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 518

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 517 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 458

               
Query: 340 acat 343
           ||||
Sbjct: 457 acat 454



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Plus

                                                                            
Query: 160      cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
                |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 33514901 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 33514960

                                                                            
Query: 220      tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
                || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 33514961 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 33515020

                                                                            
Query: 280      cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
                ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 33515021 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 33515080

                    
Query: 340      acat 343
                ||||
Sbjct: 33515081 acat 33515084



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>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0054K20
          Length = 153584

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Plus

                                                                         
Query: 160   cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
             |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 89776 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 89835

                                                                         
Query: 220   tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
             || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 89836 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 89895

                                                                         
Query: 280   cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
             ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 89896 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 89955

                 
Query: 340   acat 343
             ||||
Sbjct: 89956 acat 89959



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>dbj|AK104526.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H04, full
           insert sequence
          Length = 972

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 623 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 564

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 563 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 504

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 503 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 444

               
Query: 340 acat 343
           ||||
Sbjct: 443 acat 440



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>dbj|AK104117.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A04, full
           insert sequence
          Length = 984

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 644 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 585

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 584 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 525

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 524 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 465

               
Query: 340 acat 343
           ||||
Sbjct: 464 acat 461



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>dbj|AK061452.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F07, full
           insert sequence
          Length = 1044

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 149/184 (80%)
 Strand = Plus / Minus

                                                                       
Query: 160 cctttggtcttaaccaactccaagcatgtaacataaccaaggtcaccacgcacatgaacc 219
           |||||||||||||||| ||||| ||| || ||||| ||||| ||||| | |||||| |||
Sbjct: 637 cctttggtcttaaccagctccaggcaggtcacatacccaagatcacctctcacatggacc 578

                                                                       
Query: 220 tctatgttcttaagctcaatgtttagagggaactcataatccgcgttgcaaaccatctcc 279
           || |  | ||  || ||||| |  ||||||||||| || ||||||| ||| |||||||||
Sbjct: 577 tcaacatcctgcagatcaatctggagagggaactcgtagtccgcgtcgcacaccatctcc 518

                                                                       
Query: 280 cagctttgcaagaccacatcgtaaccggatatccgacctgccccaggatggacaacatac 339
           ||||| ||||  ||||  ||||| || |||||||| ||||||  |||||| ||||| |||
Sbjct: 517 cagctctgcatcaccatgtcgtagcccgatatccggcctgccgaaggatgaacaacgtac 458

               
Query: 340 acat 343
           ||||
Sbjct: 457 acat 454



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>emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chromosome 11 Contains the
             3' end of the Gas7 gene for growth arrest specific 7, the
             Rcvrn gene for recoverin, the Glp2r gene for glucagon-like
             peptide 2 receptor, a novel gene and the gene for a novel
             protein (1110001P11Rik), complete sequence
          Length = 212636

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 412   gtatttgctgcaaggacggaagcttc 437
             ||||||||||| ||||||||||||||
Sbjct: 36191 gtatttgctgcgaggacggaagcttc 36166



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>emb|AL355607.10| Human DNA sequence from clone RP11-367F23 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 113308

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 102   ccatgtgccatctatcttctc 122
             |||||||||||||||||||||
Sbjct: 60846 ccatgtgccatctatcttctc 60826



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>gb|AC132872.17| Homo sapiens chromosome 17, clone RP13-516M14, complete sequence
          Length = 171569

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    ataaaccaccagaaagtgtca 57
             |||||||||||||||||||||
Sbjct: 17052 ataaaccaccagaaagtgtca 17032



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>gb|AC021580.9| Homo sapiens chromosome 9, clone RP11-1091N2, complete sequence
          Length = 210557

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 102    ccatgtgccatctatcttctc 122
              |||||||||||||||||||||
Sbjct: 112599 ccatgtgccatctatcttctc 112579



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>gb|AC132938.9| Homo sapiens chromosome 17, clone RP13-20L14, complete sequence
          Length = 154252

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     ataaaccaccagaaagtgtca 57
              |||||||||||||||||||||
Sbjct: 137894 ataaaccaccagaaagtgtca 137874



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>dbj|BS000076.1| Pan troglodytes chromosome 22 clone:PTB-096O09, map 22, complete
              sequences
          Length = 186284

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 76     tgtgaagcatggtgaatgcaaatat 100
              |||||||||||||||| ||||||||
Sbjct: 152778 tgtgaagcatggtgaaggcaaatat 152754



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>dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07, map 22, complete
            sequences
          Length = 186185

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 76   tgtgaagcatggtgaatgcaaatat 100
            |||||||||||||||| ||||||||
Sbjct: 3911 tgtgaagcatggtgaaggcaaatat 3887



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>dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, section 27/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 76     tgtgaagcatggtgaatgcaaatat 100
              |||||||||||||||| ||||||||
Sbjct: 218781 tgtgaagcatggtgaaggcaaatat 218757



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>dbj|AP000951.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B650I18,
             LL56-APP region, complete sequence
          Length = 41170

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 76    tgtgaagcatggtgaatgcaaatat 100
             |||||||||||||||| ||||||||
Sbjct: 18432 tgtgaagcatggtgaaggcaaatat 18408



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>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete
               sequence
          Length = 1438950

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 150     ccaagattttcctttggtct 169
               ||||||||||||||||||||
Sbjct: 1089899 ccaagattttcctttggtct 1089918



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>ref|XM_389780.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09604.1)
            partial mRNA
          Length = 1908

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 394  aaagcgttgtagaatcgtgt 413
            ||||||||||||||||||||
Sbjct: 1070 aaagcgttgtagaatcgtgt 1051



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>ref|XM_571336.1| Cryptococcus neoformans var. neoformans JEC21 phosphatidylinositol
            3-kinase TOR1 (CNF03740) partial mRNA
          Length = 7168

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccaagattttcctttggtct 169
            ||||||||||||||||||||
Sbjct: 6262 ccaagattttcctttggtct 6243



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>emb|AL353732.14| Human DNA sequence from clone RP11-354P17 on chromosome 9 Contains
            the IFNA6 gene for interferon, alpha 6, the IFNA13 gene
            for interferon, alpha 13, the IFNA2 gene for interferon,
            alpha 2, the IFNA8 gene for interferon, alpha 8, an
            interferon, omega 1 (IFNW1) pseudogene, the IFNA1 gene
            for interferon, alpha 1, 4 interferon pseudogenes, the 3'
            end of a novel gene and a CpG island, complete sequence
          Length = 173211

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 51   agtgtcagcattttattctt 70
            ||||||||||||||||||||
Sbjct: 8348 agtgtcagcattttattctt 8367



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>emb|AL157788.16| Human DNA sequence from clone RP11-498J9 on chromosome 10 Contains a
            pseudogene similar to part of lactate dehydrogenase A
            (LDH1) (LDHD), two novel genes, the NANOS1 gene for nanos
            homolog 1 (Drosophila) and one CpG island, complete
            sequence
          Length = 119104

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   aaatataccatgtgccatct 114
            ||||||||||||||||||||
Sbjct: 5758 aaatataccatgtgccatct 5739



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>emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein beta-subunit-like protein
          Length = 1261

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 86  ggtgaatgcaaatataccat 105
           ||||||||||||||||||||
Sbjct: 482 ggtgaatgcaaatataccat 501



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>emb|AL671560.7| Mouse DNA sequence from clone RP23-149A5 on chromosome 1 Contains the 3'
              end of the Nrp2 gene for neuropilin 2, complete sequence
          Length = 157987

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    ctcccagctttgcaagaccacatc 299
              |||||||||||||||||| |||||
Sbjct: 151648 ctcccagctttgcaagactacatc 151671



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>emb|CR376737.4| Zebrafish DNA sequence from clone CH211-14G13 in linkage group 24,
             complete sequence
          Length = 158366

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   catcagcatccccactttta 591
             ||||||||||||||||||||
Sbjct: 73475 catcagcatccccactttta 73494



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>gb|AF098973.1|AF098973 Filobasidiella neoformans var. neoformans phosphatidylinositol
            3-kinase TOR1 (TOR1) mRNA, partial cds
          Length = 3249

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccaagattttcctttggtct 169
            ||||||||||||||||||||
Sbjct: 2431 ccaagattttcctttggtct 2412



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>gb|AF098972.1|AF098972 Cryptococcus neoformans var. grubii phosphatidylinositol 3-kinase
            TOR1 (TOR1) gene, complete cds
          Length = 9364

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 150  ccaagattttcctttggtct 169
            ||||||||||||||||||||
Sbjct: 7970 ccaagattttcctttggtct 7951



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>gb|AC126049.3| Mus musculus BAC clone RP23-224I16 from 1, complete sequence
          Length = 224972

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    cttcccccaagattttcctt 163
              ||||||||||||||||||||
Sbjct: 125767 cttcccccaagattttcctt 125786



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>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete
              sequence
          Length = 239244

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     gatgtgtgaagcatggtgaa 91
              ||||||||||||||||||||
Sbjct: 123615 gatgtgtgaagcatggtgaa 123634


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,449,695
Number of Sequences: 3902068
Number of extensions: 5449695
Number of successful extensions: 90864
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90723
Number of HSP's gapped (non-prelim): 131
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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