ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20n07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 329 bits (166), Expect = 7e-87 Identities = 262/294 (89%) Strand = Plus / Plus Query: 315 caccttgtttcattcacaagcaatcttggtatcaaaactgcttagacatattgcaaatga 374 |||||| | ||||||||| || || ||||||||||||||||| ||||| ||||||||||| Sbjct: 13140215 caccttatctcattcacaggctattttggtatcaaaactgctcagacagattgcaaatga 13140274 Query: 375 ttgaaatgctgatatcgggtagcggtagtccatggtgaacaagtctttgcctatctttcc 434 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 13140275 ttgaaatgctgatatcggataacggtagtccatggtgaacaagtccttcccaatctttcc 13140334 Query: 435 aaactggagaatcaccttgtcatgctcctggctaactggtccattgtcatctgaagccac 494 ||||||||||||||||||||| ||||||||| || ||| ||||| ||||| || ||||| Sbjct: 13140335 aaactggagaatcaccttgtcctgctcctggttagttggcccattttcatcagacgccac 13140394 Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||||||||| |||||||| ||||| || ||||| |||||||| |||||||||||||| Sbjct: 13140395 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 13140454 Query: 555 ttgcagttgttcatgccaccgaggagacttgttcttcagcaccagcttctcttc 608 ||||||||| |||||||||| |||||| || |||||||| |||||||| ||||| Sbjct: 13140455 ttgcagttgctcatgccacctaggagatttattcttcagaaccagcttttcttc 13140508 Score = 167 bits (84), Expect = 6e-38 Identities = 139/156 (89%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 358 agacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaacaag 417 ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 13061228 agacagattgcaaatgattgaaatgctgatatcggataacggtagtccatggtgaacaag 13061169 Query: 418 tctttgcctatctttccaaactgga-gaatcaccttgtcatgctcctggctaactggtcc 476 || || | |||||||||||||||| ||||||||||||| ||||||||| || |||||| Sbjct: 13061168 tccttctcaatctttccaaactggaggaatcaccttgtcctgctcctggttagttggtcc 13061109 Query: 477 attgtcatctgaagccaccagctgaaagttcttcac 512 ||| ||||| || | ||||||||||||||| ||||| Sbjct: 13061108 attttcatcagacgacaccagctgaaagtttttcac 13061073 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 532 ccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgttcttc 591 |||||||| ||||||||||| ||||||||||| |||||||||| |||||| || |||||| Sbjct: 13061047 ccacggaagttgaggcaccatcattgcagttgctcatgccacctaggagatttattcttc 13060988 Query: 592 agcaccagcttctcttc 608 | |||||||| ||||| Sbjct: 13060987 ggaaccagcttttcttc 13060971 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 28001915 tgctccctccgtctcaaaataagtg 28001939 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 627 tgcactgtctatccgagcagatttagatctgaagaatggaatcgacgggaaggagtc 683 |||||| ||||| ||||| ||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 13140533 tgcactatctattcgagctgattttgatctgaagaatgaaattgatgggaaagagtc 13140589 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 2711065 tgctccctccgtctcaaaataagtg 2711089 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 35884843 ctccctccgtctcaaaataagtgt 35884866 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 33596217 ctccctccgtctcaaaataagtg 33596239 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 25642940 ctccctccgtctcaaaataagtg 25642962 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 22023299 ctccctccgtctcaaaataagtg 22023321 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 9363670 ctccctccgtctcaaaataagtg 9363692 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtgt 102 |||| ||||||||||||||||||||| Sbjct: 16164093 tgctacctccgtctcaaaataagtgt 16164068 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 646 gatttagatctgaagaatggaatcgacgggaaggagtc 683 ||||| ||||||||||||| |||||| ||||| ||||| Sbjct: 13060925 gattttgatctgaagaatgaaatcgatgggaaagagtc 13060888 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 14485828 tgctccctccgtctcaaaata 14485848 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 30697046 cctccgtctcaaaataagtg 30697027 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 20892950 cctccgtctcaaaataagtg 20892931 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 20494825 ctccctccgtctcaaaataa 20494806 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 18266403 ctccctccgtcccaaaataagtgt 18266380 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 16857488 cctccgtctcaaaataagtg 16857507 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctccgtctcaaaataagtgt 102 |||||||||||||||||||| Sbjct: 16209703 ctccgtctcaaaataagtgt 16209722 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 14446014 cctccgtctcaaaataagtg 14446033 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 8148194 cctccgtctcaaaataagtg 8148213 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 6270782 ctccctccgtctcaaaataa 6270763 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccctccgtctcaaaataagt 100 |||||||||||||||||||| Sbjct: 5697311 ccctccgtctcaaaataagt 5697292 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 4473116 ctccctccgtctcaaaataa 4473097 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 4050215 ctccctccgtcccaaaataagtgt 4050192 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gtatgctccctccgtctcaaaata 97 |||| ||||||||||||||||||| Sbjct: 2531523 gtatactccctccgtctcaaaata 2531546
>gb|AC135257.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1113A07, from chromosome 3, complete sequence Length = 151173 Score = 329 bits (166), Expect = 7e-87 Identities = 262/294 (89%) Strand = Plus / Minus Query: 315 caccttgtttcattcacaagcaatcttggtatcaaaactgcttagacatattgcaaatga 374 |||||| | ||||||||| || || ||||||||||||||||| ||||| ||||||||||| Sbjct: 86423 caccttatctcattcacaggctattttggtatcaaaactgctcagacagattgcaaatga 86364 Query: 375 ttgaaatgctgatatcgggtagcggtagtccatggtgaacaagtctttgcctatctttcc 434 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 86363 ttgaaatgctgatatcggataacggtagtccatggtgaacaagtccttcccaatctttcc 86304 Query: 435 aaactggagaatcaccttgtcatgctcctggctaactggtccattgtcatctgaagccac 494 ||||||||||||||||||||| ||||||||| || ||| ||||| ||||| || ||||| Sbjct: 86303 aaactggagaatcaccttgtcctgctcctggttagttggcccattttcatcagacgccac 86244 Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||||||||| |||||||| ||||| || ||||| |||||||| |||||||||||||| Sbjct: 86243 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 86184 Query: 555 ttgcagttgttcatgccaccgaggagacttgttcttcagcaccagcttctcttc 608 ||||||||| |||||||||| |||||| || |||||||| |||||||| ||||| Sbjct: 86183 ttgcagttgctcatgccacctaggagatttattcttcagaaccagcttttcttc 86130 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 627 tgcactgtctatccgagcagatttagatctgaagaatggaatcgacgggaaggagtc 683 |||||| ||||| ||||| ||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 86105 tgcactatctattcgagctgattttgatctgaagaatgaaattgatgggaaagagtc 86049
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 329 bits (166), Expect = 7e-87 Identities = 262/294 (89%) Strand = Plus / Plus Query: 315 caccttgtttcattcacaagcaatcttggtatcaaaactgcttagacatattgcaaatga 374 |||||| | ||||||||| || || ||||||||||||||||| ||||| ||||||||||| Sbjct: 13136990 caccttatctcattcacaggctattttggtatcaaaactgctcagacagattgcaaatga 13137049 Query: 375 ttgaaatgctgatatcgggtagcggtagtccatggtgaacaagtctttgcctatctttcc 434 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 13137050 ttgaaatgctgatatcggataacggtagtccatggtgaacaagtccttcccaatctttcc 13137109 Query: 435 aaactggagaatcaccttgtcatgctcctggctaactggtccattgtcatctgaagccac 494 ||||||||||||||||||||| ||||||||| || ||| ||||| ||||| || ||||| Sbjct: 13137110 aaactggagaatcaccttgtcctgctcctggttagttggcccattttcatcagacgccac 13137169 Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||||||||| |||||||| ||||| || ||||| |||||||| |||||||||||||| Sbjct: 13137170 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 13137229 Query: 555 ttgcagttgttcatgccaccgaggagacttgttcttcagcaccagcttctcttc 608 ||||||||| |||||||||| |||||| || |||||||| |||||||| ||||| Sbjct: 13137230 ttgcagttgctcatgccacctaggagatttattcttcagaaccagcttttcttc 13137283 Score = 167 bits (84), Expect = 6e-38 Identities = 139/156 (89%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 358 agacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaacaag 417 ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 13058003 agacagattgcaaatgattgaaatgctgatatcggataacggtagtccatggtgaacaag 13057944 Query: 418 tctttgcctatctttccaaactgga-gaatcaccttgtcatgctcctggctaactggtcc 476 || || | |||||||||||||||| ||||||||||||| ||||||||| || |||||| Sbjct: 13057943 tccttctcaatctttccaaactggaggaatcaccttgtcctgctcctggttagttggtcc 13057884 Query: 477 attgtcatctgaagccaccagctgaaagttcttcac 512 ||| ||||| || | ||||||||||||||| ||||| Sbjct: 13057883 attttcatcagacgacaccagctgaaagtttttcac 13057848 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 532 ccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgttcttc 591 |||||||| ||||||||||| ||||||||||| |||||||||| |||||| || |||||| Sbjct: 13057822 ccacggaagttgaggcaccatcattgcagttgctcatgccacctaggagatttattcttc 13057763 Query: 592 agcaccagcttctcttc 608 | |||||||| ||||| Sbjct: 13057762 ggaaccagcttttcttc 13057746 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 28093239 tgctccctccgtctcaaaataagtg 28093263 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 627 tgcactgtctatccgagcagatttagatctgaagaatggaatcgacgggaaggagtc 683 |||||| ||||| ||||| ||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 13137308 tgcactatctattcgagctgattttgatctgaagaatgaaattgatgggaaagagtc 13137364 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 2711175 tgctccctccgtctcaaaataagtg 2711199 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 35974973 ctccctccgtctcaaaataagtgt 35974996 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 33686689 ctccctccgtctcaaaataagtg 33686711 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 25734249 ctccctccgtctcaaaataagtg 25734271 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 22016328 ctccctccgtctcaaaataagtg 22016350 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 9361791 ctccctccgtctcaaaataagtg 9361813 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtgt 102 |||| ||||||||||||||||||||| Sbjct: 16158626 tgctacctccgtctcaaaataagtgt 16158601 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 646 gatttagatctgaagaatggaatcgacgggaaggagtc 683 ||||| ||||||||||||| |||||| ||||| ||||| Sbjct: 13057700 gattttgatctgaagaatgaaatcgatgggaaagagtc 13057663 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 14480803 tgctccctccgtctcaaaata 14480823 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 30788468 cctccgtctcaaaataagtg 30788449 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 20885979 cctccgtctcaaaataagtg 20885960 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 20487854 ctccctccgtctcaaaataa 20487835 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 18259944 ctccctccgtcccaaaataagtgt 18259921 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 16851121 cctccgtctcaaaataagtg 16851140 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctccgtctcaaaataagtgt 102 |||||||||||||||||||| Sbjct: 16203336 ctccgtctcaaaataagtgt 16203355 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 14440989 cctccgtctcaaaataagtg 14441008 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 8146029 cctccgtctcaaaataagtg 8146048 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 6269995 ctccctccgtctcaaaataa 6269976 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ccctccgtctcaaaataagt 100 |||||||||||||||||||| Sbjct: 5696524 ccctccgtctcaaaataagt 5696505 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 4473231 ctccctccgtctcaaaataa 4473212 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 4050326 ctccctccgtcccaaaataagtgt 4050303 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 74 gtatgctccctccgtctcaaaata 97 |||| ||||||||||||||||||| Sbjct: 2531633 gtatactccctccgtctcaaaata 2531656
>dbj|AK102370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091L01, full insert sequence Length = 2102 Score = 329 bits (166), Expect = 7e-87 Identities = 262/294 (89%) Strand = Plus / Minus Query: 315 caccttgtttcattcacaagcaatcttggtatcaaaactgcttagacatattgcaaatga 374 |||||| | ||||||||| || || ||||||||||||||||| ||||| ||||||||||| Sbjct: 903 caccttatctcattcacaggctattttggtatcaaaactgctcagacagattgcaaatga 844 Query: 375 ttgaaatgctgatatcgggtagcggtagtccatggtgaacaagtctttgcctatctttcc 434 |||||||||||||||||| || ||||||||||||||||||||||| || || |||||||| Sbjct: 843 ttgaaatgctgatatcggataacggtagtccatggtgaacaagtccttcccaatctttcc 784 Query: 435 aaactggagaatcaccttgtcatgctcctggctaactggtccattgtcatctgaagccac 494 ||||||||||||||||||||| ||||||||| || ||| ||||| ||||| || ||||| Sbjct: 783 aaactggagaatcaccttgtcctgctcctggttagttggcccattttcatcagacgccac 724 Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||||||||| |||||||| ||||| || ||||| |||||||| |||||||||||||| Sbjct: 723 cagctgaaagtttttcactgaggcaacagtaacccgtccacggaagttgaggcaccaaca 664 Query: 555 ttgcagttgttcatgccaccgaggagacttgttcttcagcaccagcttctcttc 608 ||||||||| |||||||||| |||||| || |||||||| |||||||| ||||| Sbjct: 663 ttgcagttgctcatgccacctaggagatttattcttcagaaccagcttttcttc 610 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 627 tgcactgtctatccgagcagatttagatctgaagaatggaatcgacgggaaggagtc 683 |||||| ||||| ||||| ||||| ||||||||||||| ||| || ||||| ||||| Sbjct: 585 tgcactatctattcgagctgattttgatctgaagaatgaaattgatgggaaagagtc 529
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 167 bits (84), Expect = 6e-38 Identities = 139/156 (89%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 358 agacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaacaag 417 ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 138926 agacagattgcaaatgattgaaatgctgatatcggataacggtagtccatggtgaacaag 138867 Query: 418 tctttgcctatctttccaaactgga-gaatcaccttgtcatgctcctggctaactggtcc 476 || || | |||||||||||||||| ||||||||||||| ||||||||| || |||||| Sbjct: 138866 tccttctcaatctttccaaactggaggaatcaccttgtcctgctcctggttagttggtcc 138807 Query: 477 attgtcatctgaagccaccagctgaaagttcttcac 512 ||| ||||| || | ||||||||||||||| ||||| Sbjct: 138806 attttcatcagacgacaccagctgaaagtttttcac 138771 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 532 ccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgttcttc 591 |||||||| ||||||||||| ||||||||||| |||||||||| |||||| || |||||| Sbjct: 138745 ccacggaagttgaggcaccatcattgcagttgctcatgccacctaggagatttattcttc 138686 Query: 592 agcaccagcttctcttc 608 | |||||||| ||||| Sbjct: 138685 ggaaccagcttttcttc 138669 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Minus Query: 646 gatttagatctgaagaatggaatcgacgggaaggagtc 683 ||||| ||||||||||||| |||||| ||||| ||||| Sbjct: 138623 gattttgatctgaagaatgaaatcgatgggaaagagtc 138586
>emb|AM260505.1| Platanus acerifolia partial mRNA for tubby protein (tub gene) Length = 941 Score = 129 bits (65), Expect = 1e-26 Identities = 224/277 (80%) Strand = Plus / Minus Query: 324 tcattcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgc 383 ||||||||||||||||||||||||||| ||||| || || || || |||| || ||||| Sbjct: 671 tcattcacaagcaatcttggtatcaaagctgctgaggcagatcgcgaatgcctggaatgc 612 Query: 384 tgatatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggag 443 || || || || |||| ||||||||||||||||| || |||| || |||||||| || Sbjct: 611 cgagattggatactggtaatccatggtgaacaagtcctttcctactttcccaaactgaag 552 Query: 444 aatcaccttgtcatgctcctggctaactggtccattgtcatctgaagccaccagctgaaa 503 || |||| ||||||||||||| | |||||||| | |||||||||| ||| || Sbjct: 551 gatgacctcctcatgctcctggcctgcaggtccatttcctggagaagccaccaactggaa 492 Query: 504 gttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacattgcagttg 563 ||||||||| || ||||| |||||||| |||||||| || |||||||| || || || || Sbjct: 491 gttcttcaccgaagcaactgtcacccgtccacggaagttcaggcaccagcactggagctg 432 Query: 564 ttcatgccaccgaggagacttgttcttcagcaccagc 600 |||||||||| ||||| ||||||||| | ||||||| Sbjct: 431 ctcatgccacctaggagccttgttctttaacaccagc 395
>ref|NM_186089.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1687 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 1396 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1337 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 1336 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 1277 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 1276 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 1217 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 1216 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 1157 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 1156 gacttgttcttcaacaccag 1137
>ref|XM_506548.1| PREDICTED Oryza sativa (japonica cultivar-group), P0450A04.117 mRNA Length = 1949 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 1451 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1392 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 1391 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 1332 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 1331 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 1272 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 1271 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 1212 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 1211 gacttgttcttcaacaccag 1192
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 28122743 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 28122684 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 28122683 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 28122624 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 28122623 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 28122564 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 28122563 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 28122504 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 28122503 gacttgttcttcaacaccag 28122484 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 2560425 ctccctccgtctcaaaataagtg 2560447 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 22679275 ctccctccgtctcaaaataagt 22679254 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 27906086 cctccgtctcaaaataagtgt 27906106 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 gctccctccgtctcaaaataagtgt 102 |||||||||||| |||||||||||| Sbjct: 22581131 gctccctccgtcccaaaataagtgt 22581107 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 10114234 ctccctccgtctcaaaataag 10114214 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 22077138 ctccctccgtctcaaaataa 22077119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 18462226 cctccgtctcaaaataagtg 18462245 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 18068295 cctccgtctcaaaataagtg 18068314 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ctccgtctcaaaataagtgt 102 |||||||||||||||||||| Sbjct: 17338630 ctccgtctcaaaataagtgt 17338649 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 8022295 ctccctccgtctcaaaataa 8022276 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 6994174 ctccctccgtcccaaaataagtgt 6994197 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||||| |||||||||| Sbjct: 5936429 ctccctccgtctcgaaataagtgt 5936406 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 1040459 ctccctccgtctcaaaataa 1040440
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 106039 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 105980 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 105979 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 105920 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 105919 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 105860 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 105859 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 105800 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 105799 gacttgttcttcaacaccag 105780
>dbj|AK071159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O15, full insert sequence Length = 1687 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 1396 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1337 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 1336 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 1277 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 1276 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 1217 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 1216 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 1157 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 1156 gacttgttcttcaacaccag 1137
>dbj|AK060587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B07, full insert sequence Length = 1948 Score = 111 bits (56), Expect = 3e-21 Identities = 209/260 (80%) Strand = Plus / Minus Query: 340 ttggtatcaaaactgcttagacatattgcaaatgattgaaatgctgatatcgggtagcgg 399 ||||| ||||| ||||| |||||||| ||||| | |||||||| || || || |||||| Sbjct: 1451 ttggtgtcaaagctgctcagacatatcgcaaacgcctgaaatgccgagataggatagcgg 1392 Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 || ||||||||||||| ||| || || | || ||||||||||| ||||| | || || Sbjct: 1391 taatccatggtgaacatgtccttcccaactttaccaaactggaggatcacatcatcgtgt 1332 Query: 460 tcctggctaactggtccattgtcatctgaagccaccagctgaaagttcttcactgacgca 519 |||||| | ||| | | |||||||||||||||||||| |||||||| || || ||| Sbjct: 1331 tcctggttggttgggttactctcatctgaagccaccagctggaagttctttaccgatgca 1272 Query: 520 accgtcacccgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgagga 579 ||||| ||||| ||| |||| || |||||||| || ||||| ||||| ||||||| || Sbjct: 1271 accgttacccgtccatggaagttaaggcaccagcactgcagatgttcgtgccacctcggg 1212 Query: 580 gacttgttcttcagcaccag 599 ||||||||||||| |||||| Sbjct: 1211 gacttgttcttcaacaccag 1192
>gb|AY106234.1| Zea mays PCO071899 mRNA sequence Length = 1449 Score = 97.6 bits (49), Expect = 5e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||||||||| || || || ||||| ||||| |||||||||||||| Sbjct: 996 agctggaagttcttcactgacgcgacggtgacacgcccccggaagttgaggcaccaacac 937 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcagcac 596 ||||| || |||||||| ||||||| |||||||||||||| Sbjct: 936 tgcagctgctcatgccaacgaggagctttgttcttcagcac 896 Score = 48.1 bits (24), Expect = 0.039 Identities = 60/72 (83%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||| | || || || ||||| || |||||||| |||||| Sbjct: 1107 gggtaccggtagtccatggtgaatatatccttcccgatcttcccgaactggaggatcacc 1048 Query: 451 ttgtcatgctcc 462 || || |||||| Sbjct: 1047 ttctcctgctcc 1036
>ref|XM_474442.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 1131 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 1072 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 1071 ttgcagctgttcatgccacc 1052
>emb|AJ245900.1|OSA245900 Oryza sativa chromosome 4 BAC q3037-207F1 complete genome Length = 124321 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 98692 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 98751 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 98752 ttgcagctgttcatgccacc 98771
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 35214358 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 35214299 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 35214298 ttgcagctgttcatgccacc 35214279 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 19654623 ctccctccgtctcaaaataagtg 19654601 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 acagtatgctccctccgtctcaaaataagt 100 ||||||| ||||||||||| |||||||||| Sbjct: 18370782 acagtatactccctccgtcccaaaataagt 18370811 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 76 atgctccctccgtctcaaaataagtg 101 |||||||||||||| ||||||||||| Sbjct: 8834438 atgctccctccgtcccaaaataagtg 8834413 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 32334754 tgctccctccgtctcaaaata 32334774 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tccctccgtctcaaaataagt 100 ||||||||||||||||||||| Sbjct: 18983215 tccctccgtctcaaaataagt 18983195 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 34482385 cctccgtctcaaaataagtg 34482404 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 34397272 ctccctccgtcccaaaataagtgt 34397249 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 atgctccctccgtctcaaaa 95 |||||||||||||||||||| Sbjct: 34084891 atgctccctccgtctcaaaa 34084910 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 28524078 cctccgtctcaaaataagtg 28524059 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 26313901 ctccctccgtcccaaaataagtgt 26313878 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 26103842 ctccctccgtcccaaaataagtgt 26103865 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 12490882 ctccctccgtcccaaaataagtgt 12490905 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 12100901 cctccgtctcaaaataagtg 12100920
>dbj|AK104333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-G06, full insert sequence Length = 1800 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 1250 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 1191 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 1190 ttgcagctgttcatgccacc 1171
>dbj|AK098928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023N16, full insert sequence Length = 1826 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 1286 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 1227 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 1226 ttgcagctgttcatgccacc 1207
>dbj|AK066910.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091C11, full insert sequence Length = 1824 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 1288 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 1229 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 1228 ttgcagctgttcatgccacc 1209
>emb|AL732348.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0701F11, complete sequence Length = 82895 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 58355 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 58296 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 58295 ttgcagctgttcatgccacc 58276
>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24, complete sequence Length = 173770 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| |||||||||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 10204 cagctggaagttcttcactgaagccaccgtcacacggccacggaagttgaggcaccagca 10145 Query: 555 ttgcagttgttcatgccacc 574 |||||| ||||||||||||| Sbjct: 10144 ttgcagctgttcatgccacc 10125
>emb|AJ234583.1|HVU234583 Hordeum vulgare genomic DNA fragment; clone MWG0838.uni Length = 263 Score = 85.7 bits (43), Expect = 2e-13 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||||||||||||||||| ||| | |||||||||| || ||| ||||||||||| Sbjct: 163 ctccctccgtctcaaaataagtttcttaattttatactagctt-agtgcaaagttatact 221 Query: 139 aagcttgaaacatttattttgaggcggagcgagta 173 |||||||| ||| |||||||||| ||||| ||||| Sbjct: 222 aagcttgagacaattattttgagacggagggagta 256 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 |||||||||||||||||||| ||||||| Sbjct: 254 ctccctccgtctcaaaataattgtctca 227
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 91 caaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaaca 150 |||||||||||||||| |||| |||||||| ||||| |||||| ||||| |||||| ||| Sbjct: 50411 caaaataagtgtctcaactttgtactagttctagtacaaagttgtactaggcttgagaca 50470 Query: 151 tttattttgaggcggagcgagtatt 175 |||||||| | ||||| ||||||| Sbjct: 50471 gttattttgggacggagtgagtatt 50495
>ref|NM_202180.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G25280 transcript variant AT1G25280.2 mRNA, complete cds Length = 2049 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 1850 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1791 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1790 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1731 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1730 tcaccttgtcttgctc 1715
>ref|NM_102338.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G25280 transcript variant AT1G25280.1 mRNA, complete cds Length = 2112 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 1913 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1854 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1853 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1794 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1793 tcaccttgtcttgctc 1778
>emb|AJ249141.1|HVU249141 Hordeum vulgare mRNA for MADS-box protein (m1 gene) Length = 1086 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||||||||||||||| ||||||| |||| || ||| | ||||| |||||| |||| Sbjct: 916 ctccctccgtctcaaaataactgtctcaactttgtattagctctagtacaaagttgtact 975 Query: 139 aagcttgaaacatttatttt 158 |||||| | ||| ||||||| Sbjct: 976 aagcttaagacacttatttt 995
>gb|AF487271.1| Arabidopsis thaliana tubby-like protein TULP10 (TULP10) mRNA, complete cds Length = 1338 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 1336 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1277 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1276 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1217 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1216 tcaccttgtcttgctc 1201
>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene Length = 10815 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 91 caaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaaca 150 |||||||||||||||| |||| |||||| | || || |||||| |||||||||||| ||| Sbjct: 7215 caaaataagtgtctcaactttgtactagctctactacaaagttgtactaagcttgagaca 7274 Query: 151 tttattttgaggcggagcgagtat 174 |||||||||| |||| |||||| Sbjct: 7275 gttattttgagatggagggagtat 7298 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 |||||||| ||||||||||| ||||||| Sbjct: 7295 ctccctccatctcaaaataactgtctca 7268
>gb|BT006290.1| Arabidopsis thaliana At1g25280 mRNA, complete cds Length = 804 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 802 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 743 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 742 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 683 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 682 tcaccttgtcttgctc 667
>emb|BX813359.1|CNS0ABZ8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB12ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1900 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 1755 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1696 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1695 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1636 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1635 tcaccttgtcttgctc 1620
>gb|AC079374.4|AC079374 Arabidopsis thaliana chromosome 1 BAC F4F7 genomic sequence, complete sequence Length = 89690 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Plus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 40043 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 40102 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 40103 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 40162 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 40163 tcaccttgtcttgctc 40178
>gb|BT001997.1| Arabidopsis thaliana unknown protein (At1g25280) mRNA, complete cds Length = 2019 Score = 71.9 bits (36), Expect = 3e-09 Identities = 111/136 (81%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||||| || | Sbjct: 1850 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgaaacgccg 1791 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1790 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1731 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1730 tcaccttgtcttgctc 1715
>gb|AY108213.1| Zea mays PCO076139 mRNA sequence Length = 1391 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| ||||||||||| || |||| ||||| || |||||||| |||||||||||||| Sbjct: 908 cagctggaagttcttcaccgaggcaattgtcacacggccacggaagttgaggcaccaaca 849 Query: 555 ttgcagttgttcatgccacc 574 ||||| ||||| ||||||| Sbjct: 848 ctgcagctgttcgtgccacc 829 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 433 ccaaactggagaatcaccttgtc 455 ||||||||||||||||||||||| Sbjct: 997 ccaaactggagaatcaccttgtc 975
>gb|AY821694.1| Crithopsis delileana beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1521 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||| || |||||||||||||||| |||| ||||| ||||||| |||||| |||| Sbjct: 1203 ctccctccatcccaaaataagtgtctcaactttgtactaactttagtacaaagttgtact 1262 Query: 139 aagct 143 ||||| Sbjct: 1263 aagct 1267 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtct 104 ||||||||||| |||||||||||||| Sbjct: 1302 ctccctccgtcccaaaataagtgtct 1277
>ref|XM_479670.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2127 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 1778 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 1719 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 1718 ttgccatg 1711 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 1586 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 1540
>ref|XM_506618.1| PREDICTED Oryza sativa (japonica cultivar-group), P0015C07.29 mRNA Length = 3119 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 1779 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 1720 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 1719 ttgccatg 1712 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 1587 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 1541
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||| || |||||||||||| | | ||| || ||| ||||||||||||||||||| Sbjct: 117197 ctccctccatcccaaaataagtgtgttaattttgtattagctttagtataaagttatact 117138 Query: 139 aagcttgaaacatttatttt 158 ||| |||| ||| ||||||| Sbjct: 117137 aagattgagacacttatttt 117118
>gb|DQ175992.1| Hordeum vulgare subsp. vulgare clone 65-22A-RB flanking T-DNA insertion sequence Length = 267 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||||||| |||||||| ||||| | |||| | |||| | ||||||||| ||||||| Sbjct: 148 ctccctccgtcccaaaataattgtcttaactttgttctagctctagtataaaattatact 89 Query: 139 aagcttgaaacatttatttt 158 |||||| | ||| ||||||| Sbjct: 88 aagcttaagacacttatttt 69
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 63.9 bits (32), Expect = 7e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 85 ccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatactaagctt 144 ||||| |||||||||||||||| |||| |||||| ||||||||||| || |||||||||| Sbjct: 1826 ccgtcacaaaataagtgtctcaactttgtactag-tttagtataaaattgtactaagctt 1884
>gb|AF509746.1| Hordeum vulgare subsp. spontaneum OSU6 receptor-like kinase gene, complete cds Length = 2513 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||||||| |||||||| ||||||| |||| |||||| | ||||||||| || || | Sbjct: 1312 ctccctccgtcccaaaataattgtctcaactttgtactagctctagtataaaattgtatt 1371 Query: 139 aagcttgaaacatttatttt 158 |||||| | ||| ||||||| Sbjct: 1372 aagcttaagacacttatttt 1391
>gb|AF509745.1| Hordeum vulgare subsp. vulgare Steptoe receptor-like kinase gene, complete cds Length = 2550 Score = 63.9 bits (32), Expect = 7e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||||||| |||||||| ||||||| |||| |||||| | ||||||||| || || | Sbjct: 1337 ctccctccgtcccaaaataattgtctcaactttgtactagctctagtataaaattgtatt 1396 Query: 139 aagcttgaaacatttatttt 158 |||||| | ||| ||||||| Sbjct: 1397 aagcttaagacacttatttt 1416
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 184095 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 184036 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 184035 ttgccatg 184028 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 183903 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 183857 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 28272438 ctccctccgtctcaaaataagt 28272417 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 tatgctccctccgtctcaaaataagt 100 ||||| |||||||||||||||||||| Sbjct: 5568432 tatgcaccctccgtctcaaaataagt 5568407 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||| ||||||||||||| Sbjct: 28100781 ctccctccgtttcaaaataagtgt 28100758 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 22717773 ctccctccgtcccaaaataagtgt 22717750 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 22705812 cctccgtctcaaaataagtg 22705831 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 21033529 cctccgtctcaaaataagtg 21033510 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 11746446 cctccgtctcaaaataagtg 11746427 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||| ||||||||||| Sbjct: 3910348 ctccctccgtcttaaaataagtgt 3910371 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 1023811 cctccgtctcaaaataagtg 1023792
>emb|BX814427.1|CNS0AC2Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2022 Score = 63.9 bits (32), Expect = 7e-07 Identities = 110/136 (80%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 |||||||||||| |||||| ||||| ||||||| ||||| ||||| | ||| | || | Sbjct: 1918 attcacaagcaagcttggtgtcaaagctgcttaagcatatcgcaaacgcctgagacgccg 1859 Query: 386 atatcgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaa 445 ||| || || | |||||||| ||||||| ||||| |||| || ||||||||||||| Sbjct: 1858 ataatggatacctatagtccattgtgaacatatctttccctactttaccaaactggagaa 1799 Query: 446 tcaccttgtcatgctc 461 |||||||||| ||||| Sbjct: 1798 tcaccttgtcttgctc 1783
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 99430 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 99371 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 99370 ttgccatg 99363 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 99238 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 99192
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 63.9 bits (32), Expect = 7e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||| |||||| |||||||||||||||| |||| |||| | ||||| |||||| |||| Sbjct: 3669 ctccttccgtcccaaaataagtgtctcaattttacactaactctagtacaaagttgtact 3728 Query: 139 aagcttgaaacatttattttgaggcggagcgagtat 174 ||| |||| ||| |||||||| | ||||| |||||| Sbjct: 3729 aaggttgagacacttattttgggacggagggagtat 3764 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 ||||||||||| |||||||||||||||| Sbjct: 3761 ctccctccgtcccaaaataagtgtctca 3734
>dbj|AK104486.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-A09, full insert sequence Length = 1233 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 905 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 846 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 845 ttgccatg 838 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 713 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 667
>dbj|AK100078.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J17, full insert sequence Length = 2129 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 1780 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 1721 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 1720 ttgccatg 1713 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 1585 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 1539
>dbj|AK060879.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A08, full insert sequence Length = 1233 Score = 63.9 bits (32), Expect = 7e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||||| Sbjct: 905 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcacc 846 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 845 ttgccatg 838 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 713 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 667
>dbj|AK120706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001B21, full insert sequence Length = 3119 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 526 acccgcccacggaaattgaggcaccaacattgcagttgttcatgcca 572 ||||| |||||||| |||||||||||||||||||| || |||||||| Sbjct: 1587 acccggccacggaagttgaggcaccaacattgcagctgctcatgcca 1541 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||||| ||| ||||| | ||| |||||||| || |||| | Sbjct: 1779 gggtaccggtagtccatggtgaacatgtccttgccaaccttaccaaactgcaggatcatc 1720 Query: 451 ttgtcatg 458 ||| |||| Sbjct: 1719 ttgccatg 1712
>emb|AJ234485.1|HVU234485 Hordeum vulgare genomic DNA fragment; clone MWG0526.rev Length = 379 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||| |||||||||||| ||||||| | || |||||| | ||||| ||| || |||| Sbjct: 212 ctccctctgtctcaaaataactgtctcaacattgtactagctctagtacaaaattgtact 153 Query: 139 aagcttgaaacatttattttgaggcggagcgagta 173 ||| || | ||| |||||||||| ||||| ||||| Sbjct: 152 aagattaagacacttattttgagacggagggagta 118 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtct 104 |||||||||||||||||||||||||| Sbjct: 120 ctccctccgtctcaaaataagtgtct 145
>ref|XM_467371.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2345 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 1788 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1729 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 1728 tgcagctgctcatgccagcggggagctttgttcttcag 1691
>emb|X64560.1|HVHSP17A H.vulgare hsp17 gene for 17 kd heat shock protein Length = 1515 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 92 aaaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaacat 151 ||||||||||||| | |||||||||| |||| |||||| || |||||| ||||| |||| Sbjct: 146 aaaataagtgtctgaactttatactaactttaatataaaattgtactaaacttgagacat 205 Query: 152 ttattt 157 |||||| Sbjct: 206 ttattt 211
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 29130000 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 29129941 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 29129940 tgcagctgctcatgccagcggggagctttgttcttcag 29129903 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 27774805 ctccctccgtctcaaaataagtgt 27774828 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 19288168 ctccctccgtctcaaaataagtgt 19288191 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 17029440 ctccctccgtctcaaaataagtg 17029462 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 6606757 cctccgtctcaaaataagtgt 6606777 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 34975660 ctccctccgtcccaaaataagtgt 34975637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 34763430 cctccgtctcaaaataagtg 34763411 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 32497103 cctccgtctcaaaataagtg 32497122 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 32046091 ctccctccgtcccaaaataagtgt 32046114 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 21857432 ctccctccgtcccaaaataagtgt 21857455 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 21389935 ctccctccgtcccaaaataagtgt 21389958 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 20239096 cctccgtctcaaaataagtg 20239115 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 19445683 ctccctccgtcccaaaataagtgt 19445660 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 19287158 ctccctccgtcccaaaataagtgt 19287181 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 3600490 ctccctccgtcccaaaataagtgt 3600467
>gb|AY140469.1| Arabidopsis thaliana clone P1WB1-C01-6094 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140468.1| Arabidopsis thaliana clone P1WB1-C01-6092 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140467.1| Arabidopsis thaliana clone P1WB1-C01-6054 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140466.1| Arabidopsis thaliana clone P1WB1-C01-1248 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140465.1| Arabidopsis thaliana clone P1WB1-C01-1220 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140464.1| Arabidopsis thaliana clone P1WB1-C01-1084 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140463.1| Arabidopsis thaliana clone P1WB1-C01-1074 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140462.1| Arabidopsis thaliana clone P1WB1-C01-1006 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140461.1| Arabidopsis thaliana clone P1WB1-C01-996 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140460.1| Arabidopsis thaliana clone P1WB1-C01-970 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>gb|AY140459.1| Arabidopsis thaliana clone P1WB1-C01-903 unknown protein gene, exons 1 through 4 and partial cds Length = 1556 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 400 tagtccatggtgaacaagtctttgcctatctttccaaactggagaatcaccttgtcatgc 459 |||||||| ||||||| ||||| |||| || ||||||||||||||||||||||| ||| Sbjct: 1523 tagtccattgtgaacatatctttccctactttaccaaactggagaatcaccttgtcttgc 1464 Query: 460 tc 461 || Sbjct: 1463 tc 1462
>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0680A05 Length = 168092 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 19968 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 19909 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 19908 tgcagctgctcatgccagcggggagctttgttcttcag 19871
>dbj|AK101936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033074D16, full insert sequence Length = 3316 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 2836 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 2777 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 2776 tgcagctgctcatgccagcggggagctttgttcttcag 2739
>dbj|AK064855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H10, full insert sequence Length = 2345 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 1788 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1729 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 1728 tgcagctgctcatgccagcggggagctttgttcttcag 1691
>dbj|AK062089.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-G09, full insert sequence Length = 1571 Score = 60.0 bits (30), Expect = 1e-05 Identities = 81/98 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| |||||||| ||||| || || || || ||||| ||||| ||||||||||| || Sbjct: 1091 agctggaagttcttgactgatgctactgtaacacgccctcggaagttgaggcaccagcac 1032 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || |||||||| || |||| ||||||||||| Sbjct: 1031 tgcagctgctcatgccagcggggagctttgttcttcag 994
>ref|NM_103621.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT1G47270 mRNA, complete cds Length = 1678 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 352 ctgcttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtg 411 ||||||| ||| || ||||| | ||| ||||| || |||||||| || || ||||| ||| Sbjct: 1486 ctgcttaaacaaatagcaaaagcttggaatgcagagatcgggtaacgataatccattgtg 1427 Query: 412 aacaagtctttgcctatctttccaaactg 440 || | ||||||||||||||| |||||||| Sbjct: 1426 aaaatgtctttgcctatcttcccaaactg 1398
>gb|AF487268.1| Arabidopsis thaliana tubby-like protein TULP6 (TULP6) mRNA, complete cds Length = 1167 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 352 ctgcttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtg 411 ||||||| ||| || ||||| | ||| ||||| || |||||||| || || ||||| ||| Sbjct: 1139 ctgcttaaacaaatagcaaaagcttggaatgcagagatcgggtaacgataatccattgtg 1080 Query: 412 aacaagtctttgcctatctttccaaactg 440 || | ||||||||||||||| |||||||| Sbjct: 1079 aaaatgtctttgcctatcttcccaaactg 1051
>gb|AC079677.4|AC079677 Arabidopsis thaliana chromosome 1 BAC F8G22 genomic sequence, complete sequence Length = 42801 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 352 ctgcttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtg 411 ||||||| ||| || ||||| | ||| ||||| || |||||||| || || ||||| ||| Sbjct: 1787 ctgcttaaacaaatagcaaaagcttggaatgcagagatcgggtaacgataatccattgtg 1846 Query: 412 aacaagtctttgcctatctttccaaactg 440 || | ||||||||||||||| |||||||| Sbjct: 1847 aaaatgtctttgcctatcttcccaaactg 1875
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||||||| |||||||| ||||||| ||| ||||| ||||||| |||||| |||| Sbjct: 78749 ctccctccgtcccaaaataactgtctcaagtttgtactaactttagtacaaagttgtact 78690 Query: 139 aagcttga 146 ||| |||| Sbjct: 78689 aaggttga 78682 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctca 106 |||||| |||| |||||||||||||||| Sbjct: 78609 ctcccttcgtcccaaaataagtgtctca 78636
>gb|AF509744.1| Hordeum vulgare subsp. vulgare Morex receptor-like kinase gene, complete cds Length = 4643 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaa 130 ||||||||||| |||||||| ||||||| |||| |||||| | ||||||||| Sbjct: 2038 ctccctccgtcccaaaataattgtctcaactttgtactagctctagtataaa 2089
>dbj|AB183299.1| Triticum aestivum WHLP gene for ribosomal L14 protein, complete cds Length = 1691 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtgtctcagcttta 112 ||||||||||||| |||||||||||||||| ||||| Sbjct: 316 tgctccctccgtcccaaaataagtgtctcaacttta 351 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtgtctca 106 |||||||| |||||||||||||||| Sbjct: 395 cctccgtcccaaaataagtgtctca 371
>dbj|AP004525.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT08O18, TM0052b, complete sequence Length = 86497 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 495 cagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaaca 554 |||||| || ||||| || ||||| || ||||| || || | ||| ||||| ||||| || Sbjct: 75199 cagctggaaattcttgaccgacgcgacagtcactcggcccctgaagttgagacaccagca 75258 Query: 555 ttgcagttgttcatgccaccgaggagacttgttctt 590 |||||| ||||||||||| | |||||||||||||| Sbjct: 75259 ttgcagctgttcatgccatctcggagacttgttctt 75294
>gb|AY821703.1| Henrardia persica beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1460 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatacta 117 ||||||||||| ||||||||||| |||| |||||||||| Sbjct: 1195 ctccctccgtcccaaaataagtgactcaactttatacta 1233 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagcttta 112 ||||||||||| ||||||||||| |||| ||||| Sbjct: 1265 ctccctccgtcccaaaataagtgactcaacttta 1232
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 103250 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 103308 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 103049 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 103108 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 103109 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 103155
>ref|XM_475311.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 1307 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 1248 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 1247 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 1201 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 1106 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 1048
>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds Length = 4954 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||||||| ||||||| | ||| | |||| ||||| | ||||| ||||||||||| Sbjct: 3883 ctccctccgtcttaaaataattatcttaactttgtactatctctagtacaaagttatact 3824 Query: 139 aagcttgaaacatttattt 157 |||||| | ||| |||||| Sbjct: 3823 aagcttaagacacttattt 3805
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 33966 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 34024 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 33765 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 33824 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 33825 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 33871
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagtt 133 ||||||||||| |||| |||||| |||| |||||||||| ||||||| |||||| Sbjct: 108671 ctccctccgtcccaaattaagtgactcaactttatactaactttagtacaaagtt 108617 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagtt 133 ||||||| ||| ||||||||||| |||| |||| ||||| ||||||||||||| Sbjct: 108590 ctccctctgtcccaaaataagtgactcaactttgtactaaagttagtataaagtt 108644
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 21316644 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 21316702 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 21316443 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 21316502 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 21316503 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 21316549 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || |||||||| ||| ||||||| | |||||| || Sbjct: 25300794 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 25300735 Query: 556 tgcagttgttcatgcca 572 ||||| || |||||||| Sbjct: 25300734 tgcagatgctcatgcca 25300718 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 23469980 ctccctccgtctcaaaataagtg 23470002 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 17694450 ctccctccgtctcaaaataagtg 17694472 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 24834751 ctccctccgtctcaaaataagt 24834730 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||| ||||||||||| Sbjct: 26275774 tgctccctccgtcccaaaataagtg 26275798 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 6178583 tgctccctccgtctcaaaata 6178603 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 27232280 ctccctccgtcccaaaataagtgt 27232303 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 22724330 cctccgtctcaaaataagtg 22724349 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 20927386 cctccgtctcaaaataagtg 20927405 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 17061483 ctccctccgtctcaaaataa 17061464 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 5399311 cctccgtctcaaaataagtg 5399292 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 4948605 ctccctccgtcccaaaataagtgt 4948628 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 2664265 cctccgtctcaaaataagtg 2664246
>dbj|AK103583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133A18, full insert sequence Length = 2027 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 1654 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 1595 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 1594 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 1548 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 1453 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 1395
>dbj|AK074017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D08, full insert sequence Length = 2009 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 1667 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 1608 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 1607 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 1561 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 1465 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 1407
>dbj|AK069622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F15, full insert sequence Length = 2023 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 1650 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 1591 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 1590 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 1544 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 1449 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 1391
>emb|CT485798.2| Medicago truncatula chromosome 5 clone mth2-24d7, COMPLETE SEQUENCE Length = 115553 Score = 54.0 bits (27), Expect = 6e-04 Identities = 81/99 (81%) Strand = Plus / Minus Query: 489 agccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggca 548 |||||| || ||||||||||| ||||| || || || || || || |||||| ||||| Sbjct: 76528 agccacaagttgaaagttcttaactgaagccactgtaacgcggcccttgaaatttaggca 76469 Query: 549 ccaacattgcagttgttcatgccaccgaggagacttgtt 587 ||| |||||||| ||||||||||| | ||||||||||| Sbjct: 76468 ccagcattgcagctgttcatgccatctgggagacttgtt 76430
>dbj|AK059586.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B11, full insert sequence Length = 1029 Score = 54.0 bits (27), Expect = 6e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 355 cttagacatattgcaaatgattgaaatgctgatatcgggtagcggtagtccatggtgaac 414 |||| |||||||||||||| || || ||||| | ||| |||||||| ||||| |||||| Sbjct: 635 cttaaacatattgcaaatgcctggaaagctgagagcggatagcggtaatccattgtgaac 576 Query: 415 aagtctttgcctatctttccaaactggagaatcaccttgtcatgctc 461 | ||||| ||| ||| |||||||| ||||| | |||||| ||||| Sbjct: 575 atatcttttgctaccttaccaaactgtagaataatcttgtcctgctc 529 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 529 cgcccacggaaattgaggcaccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||||||||| |||||||| ||||| || || |||||||||| ||| | |||||| Sbjct: 434 cgcccacggaaattaaggcaccagcattggagctgctcatgccacctaggggccttgtt 376
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/50 (90%), Gaps = 2/50 (4%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg--tctcagctttatactagttttagta 126 ||||||||||| ||||||||||| ||||| |||||||||| |||||||| Sbjct: 339 ctccctccgtcccaaaataagtggatctcaactttatactatttttagta 388 Score = 40.1 bits (20), Expect = 9.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagtttt 122 ||||||||||| | ||||||||| |||| |||| ||||| |||| Sbjct: 433 ctccctccgtcccgaaataagtgactcaactttgtactaatttt 390
>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b) pseudogene, partial sequence Length = 4018 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 |||||||||||| ||||||| | ||| | |||| ||||| | ||||| ||||||||||| Sbjct: 3931 ctccctccgtcttaaaataattatcttaactttgtactatctctagtacaaagttatact 3872 Query: 139 aagcttgaaacatttattt 157 |||||| | ||| |||||| Sbjct: 3871 aagcttaagacacttattt 3853
>ref|NM_121873.3| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT5G18680 mRNA, complete cds Length = 1474 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 1097 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 1038 Query: 550 ca 551 || Sbjct: 1037 ca 1036
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12 (WM1.12) genes, complete cds; transposons Ophelia2, Angela3s, and XJ3, complete sequence; LRR protein WM1.3 (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1, Jody, Angela, and XJ and Stowaway MITE, complete sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1) genes, complete cds; transposons XJ, XA, Angela, and Fred and WM1.11 gene, complete sequence; RPM1-like sequence and LRR protein WM1.10 (WM1.10) genes, complete cds; and transposon XJ, complete sequence Length = 198649 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagcttta 112 ||||||| |||||||||||||||||||| ||||| Sbjct: 197355 ctccctcagtctcaaaataagtgtctcaacttta 197322
>gb|AY268139.1| Hordeum vulgare BAC 184G9, complete sequece Length = 120562 Score = 52.0 bits (26), Expect = 0.002 Identities = 78/94 (82%), Gaps = 1/94 (1%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttata-ctaa 140 ||||||||||||||||| ||||| | ||||||| || ||| |||||||| || || ||| Sbjct: 69769 cctccgtctcaaaataactgtcttaactttatattaatttcagtataaaattgtatttaa 69710 Query: 141 gcttgaaacatttattttgaggcggagcgagtat 174 | || ||||| ||||||||| ||||| |||||| Sbjct: 69709 gtttaaaacagttattttgaaacggagggagtat 69676 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactag 118 |||| ||||| ||||||||| |||||| ||||||||||| Sbjct: 38629 ctccatccgtatcaaaataattgtctcgactttatactag 38590
>gb|BT013601.1| Lycopersicon esculentum clone 132366F, mRNA sequence Length = 1781 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 547 caccaacattgcagttgttcatgccaccgaggagacttgttcttca 592 ||||| ||||| |||||||||||||||| ||||| |||||||||| Sbjct: 1068 caccagcattggagttgttcatgccacctaggagctttgttcttca 1023
>gb|AY046922.1| Arabidopsis thaliana tubby-like protein 12 mRNA, complete cds Length = 1143 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 959 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 900 Query: 550 ca 551 || Sbjct: 899 ca 898
>gb|BT010768.1| Arabidopsis thaliana At5g18680 gene, complete cds Length = 1259 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 1017 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 958 Query: 550 ca 551 || Sbjct: 957 ca 956
>emb|BX830291.1|CNS0A1DW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB70ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1281 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 998 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 939 Query: 550 ca 551 || Sbjct: 938 ca 937
>gb|AC051627.4|AC051627 Genomic Sequence For Arabidopsis thaliana Clone T1A4 From Chromosome V, complete sequence Length = 85746 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 33807 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 33748 Query: 550 ca 551 || Sbjct: 33747 ca 33746
>gb|BT020601.1| Arabidopsis thaliana At5g18680 gene, complete cds Length = 1170 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 490 gccaccagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcac 549 ||||| ||||||||||||||||||||||| || || || || ||| ||||||| | |||| Sbjct: 986 gccacgagctgaaagttcttcactgacgctactgtgacacggccatggaaattcaagcac 927 Query: 550 ca 551 || Sbjct: 926 ca 925
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 73 agtatgctccctccgtctcaaaataagtg 101 ||||| ||||||||||||||||||||||| Sbjct: 131679 agtatactccctccgtctcaaaataagtg 131651
>gb|AY133251.1|AY133250S2 Hordeum vulgare subsp. vulgare starch synthase II gene, exon 9 and complete cds Length = 3856 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatactagttttagtataaagttatact 138 ||||||||||| |||||||| ||||||| |||| |||||| | ||||| ||| || |||| Sbjct: 999 ctccctccgtcccaaaataactgtctcaactttgtactagctctagtacaaaattgtact 940 Query: 139 a 139 | Sbjct: 939 a 939
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || |||||||| ||| ||||||| | |||||| || Sbjct: 35398 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 35339 Query: 556 tgcagttgttcatgcca 572 ||||| || |||||||| Sbjct: 35338 tgcagatgctcatgcca 35322
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 23111 tgctccctccgtctcaaaataagtg 23087
>gb|AF386521.1|AF386521 Pyrus communis putative Tub family protein mRNA, partial cds Length = 878 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Minus Query: 326 attcacaagcaatcttggtatcaaaactgcttagacatattgcaaatgattgaaatgctg 385 ||||||| ||||||||||| ||||| ||||| || || |||| ||||| || || |||| Sbjct: 658 attcacaggcaatcttggtgtcaaagctgctgaggcagattgaaaatgcctggaacgctg 599 Query: 386 atatcgggtagcggtagtccatggt 410 |||| || || ||||| |||||||| Sbjct: 598 atattggataccggtaatccatggt 574 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 547 caccaacattgcagttgttcatgccaccgaggagacttgtt 587 |||||||| || ||||| || |||||||||||||||||||| Sbjct: 440 caccaacactggagttgctcgtgccaccgaggagacttgtt 400
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 73 agtatgctccctccgtctcaaaataagtg 101 ||||| ||||||||||||||||||||||| Sbjct: 5165720 agtatactccctccgtctcaaaataagtg 5165748 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataa 98 |||||||||||||||||||||| Sbjct: 24978281 tgctccctccgtctcaaaataa 24978302 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttgtttcattcacaagcaat 338 |||||||||||||||||||| Sbjct: 20055371 ttgtttcattcacaagcaat 20055352 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 357630 ctccctccgtcccaaaataagtgt 357653
>gb|AY140473.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-14 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 433 ccaaactggagaatcaccttgtcatgctc 461 ||||||||||||||||||||||| ||||| Sbjct: 1612 ccaaactggagaatcaccttgtcttgctc 1584
>gb|AY140472.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-11 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 433 ccaaactggagaatcaccttgtcatgctc 461 ||||||||||||||||||||||| ||||| Sbjct: 1612 ccaaactggagaatcaccttgtcttgctc 1584
>gb|AY140471.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-4 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 433 ccaaactggagaatcaccttgtcatgctc 461 ||||||||||||||||||||||| ||||| Sbjct: 1612 ccaaactggagaatcaccttgtcttgctc 1584
>gb|AY140470.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-3 unknown protein gene, exons 1 through 4 and partial cds Length = 1678 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 433 ccaaactggagaatcaccttgtcatgctc 461 ||||||||||||||||||||||| ||||| Sbjct: 1612 ccaaactggagaatcaccttgtcttgctc 1584
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||||| Sbjct: 55984 tgctccctccgtctcaaaataagtg 56008
>dbj|AK098851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H08, full insert sequence Length = 1630 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || |||||||| ||| ||||||| | |||||| || Sbjct: 1119 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 1060 Query: 556 tgcagttgttcatgcca 572 ||||| || |||||||| Sbjct: 1059 tgcagatgctcatgcca 1043
>dbj|AK061747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G02, full insert sequence Length = 1685 Score = 50.1 bits (25), Expect = 0.010 Identities = 64/77 (83%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || |||||||| ||| ||||||| | |||||| || Sbjct: 1185 agctggaagttcttcaccgaggcgacggtcacccggccatggaaattcaagcaccagcac 1126 Query: 556 tgcagttgttcatgcca 572 ||||| || |||||||| Sbjct: 1125 tgcagatgctcatgcca 1109
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 73 agtatgctccctccgtctcaaaataagtg 101 ||||| ||||||||||||||||||||||| Sbjct: 5232197 agtatactccctccgtctcaaaataagtg 5232225 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataa 98 |||||||||||||||||||||| Sbjct: 25289871 tgctccctccgtctcaaaataa 25289892 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttgtttcattcacaagcaat 338 |||||||||||||||||||| Sbjct: 20342247 ttgtttcattcacaagcaat 20342228 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 357630 ctccctccgtcccaaaataagtgt 357653
>gb|DQ201146.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome C (PhyC) gene, complete cds Length = 4914 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 ||||||||||| |||||||||||||||| Sbjct: 4042 ctccctccgtcccaaaataagtgtctca 4015 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 93 aaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaacatt 152 |||||||||||||| ||| |||||| | || || ||| || |||| ||||||| ||| | Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaaattgtactcagcttgagacact 4023 Query: 153 tattttgaggcggagcgagta 173 ||||||| | ||||| ||||| Sbjct: 4024 tattttgggacggagggagta 4044
>gb|DQ238106.1| Hordeum vulgare subsp. vulgare cv. Morex phytochrome C (PhyC) gene, complete cds Length = 4938 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 ||||||||||| |||||||||||||||| Sbjct: 4042 ctccctccgtcccaaaataagtgtctca 4015 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 93 aaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaacatt 152 |||||||||||||| ||| |||||| | || || ||| || |||| ||||||| ||| | Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaaattgtactcagcttgagacact 4023 Query: 153 tattttgaggcggagcgagta 173 ||||||| | ||||| ||||| Sbjct: 4024 tattttgggacggagggagta 4044
>gb|DQ201145.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC) gene, complete cds Length = 4914 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctca 106 ||||||||||| |||||||||||||||| Sbjct: 4042 ctccctccgtcccaaaataagtgtctca 4015 Score = 42.1 bits (21), Expect = 2.4 Identities = 66/81 (81%) Strand = Plus / Plus Query: 93 aaataagtgtctcagctttatactagttttagtataaagttatactaagcttgaaacatt 152 |||||||||||||| ||| |||||| | || || ||| || |||| ||||||| ||| | Sbjct: 3964 aaataagtgtctcaattttgtactagctctattacaaaattgtactcagcttgagacact 4023 Query: 153 tattttgaggcggagcgagta 173 ||||||| | ||||| ||||| Sbjct: 4024 tattttgggacggagggagta 4044
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 76282 ctccctccgtctcaaaataagtgt 76259
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 29328724 ctccctccgtctcaaaataagtgt 29328701 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 29371577 ctccctccgtctcaaaataagtg 29371555 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atgctccctccgtctcaaaataagt 100 ||||| ||||||||||||||||||| Sbjct: 41086275 atgcttcctccgtctcaaaataagt 41086251 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||| ||||||||||| Sbjct: 32719881 tgctccctccgtcccaaaataagtg 32719857 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 32097964 ctccctccgtctcaaaataag 32097944 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 12345211 tgctccctccgtctcaaaata 12345191 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 42789159 cctccgtctcaaaataagtg 42789140 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 41894334 ctccctccgtcccaaaataagtgt 41894357 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||| ||||||||||||| Sbjct: 41835515 ctccctccgtttcaaaataagtgt 41835538 Score = 40.1 bits (20), Expect = 9.5 Identities = 65/80 (81%) Strand = Plus / Minus Query: 493 accagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaa 552 |||||||| || ||||||||||| |||| || || || |||||||| || |||||||| Sbjct: 37532130 accagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccag 37532071 Query: 553 cattgcagttgttcatgcca 572 || || || || |||||||| Sbjct: 37532070 cactgtagctgctcatgcca 37532051 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tatgctccctccgtctcaaaataa 98 |||||||||||| ||||||||||| Sbjct: 35635305 tatgctccctccttctcaaaataa 35635282 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 34318146 ctccctccgtctcaaaataa 34318165 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 33153743 cctccgtctcaaaataagtg 33153724 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 27573786 ctccctccgtcccaaaataagtgt 27573809 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 26616453 ctccctccgtctcaaaataa 26616434 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 24411418 ctccctccgtcccaaaataagtgt 24411395 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 23732417 ctccctccgtctcaaaataa 23732398 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 13911698 ctccctccgtcccaaaataagtgt 13911721 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 4447440 ctccctccgtcccaaaataagtgt 4447463 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 1648902 ctccctccgtcccaaaataagtgt 1648925 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 1295353 ctccctccgtcccaaaataagtgt 1295330 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 176903 cctccgtctcaaaataagtg 176922
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 107587 ctccctccgtctcaaaataagtgt 107564 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 150440 ctccctccgtctcaaaataagtg 150418
>dbj|AP003273.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510F09 Length = 138277 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 23786 ctccctccgtctcaaaataagtgt 23763 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 66639 ctccctccgtctcaaaataagtg 66617
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 60138 ctccctccgtctcaaaataagtgt 60161
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0458B05 Length = 144917 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||||||||||||||| Sbjct: 55966 ctccctccgtctcaaaataagtgt 55989 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 54956 ctccctccgtcccaaaataagtgt 54979
>gb|AY111565.1| Zea mays CL11715_1 mRNA sequence Length = 586 Score = 48.1 bits (24), Expect = 0.039 Identities = 57/68 (83%) Strand = Plus / Plus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||| ||||||| ||| ||| | | ||| |||||||| || ||||| Sbjct: 415 gggtatcggtagtccatagtgaacatgtcattggcgaccttaccaaactgcaggatcact 474 Query: 451 ttgtcatg 458 |||||||| Sbjct: 475 ttgtcatg 482
>gb|BT016712.1| Zea mays clone Contig545 mRNA sequence Length = 1715 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 390 cgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactg 440 |||||||| ||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 1204 cgggtagcagtagtccatggtgaagatgtccttgccgaccttcccaaactg 1154 Score = 40.1 bits (20), Expect = 9.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcacca 551 ||||| |||||||| || || || || |||||||| || ||||| ||||||||||| Sbjct: 1050 agctggaagttcttgaccgaggcgacagtcacccggccccggaagttgaggcacca 995
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 71208 ctccctccgtctcaaaataagtg 71230
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 46.1 bits (23), Expect = 0.15 Identities = 35/39 (89%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatacta 117 ||||||||||| ||||||||||| |||| |||| ||||| Sbjct: 81480 ctccctccgtcccaaaataagtgactcaactttgtacta 81518
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 68863 ctccctccgtctcaaaataagtg 68841
>gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0018K15, complete sequence Length = 168519 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 155514 ctccctccgtctcaaaataagtg 155536
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 59411 ctccctccgtctcaaaataagtg 59389
>gb|AC119408.23| Medicago truncatula clone mth2-5f18, complete sequence Length = 120127 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctc 105 |||||||||||||||||||| |||||| Sbjct: 92197 ctccctccgtctcaaaataattgtctc 92171
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 61070 ctccctccgtctcaaaataagtg 61092
>gb|AC151598.2| Medicago truncatula chromosome 2 BAC clone mte1-49g8, complete sequence Length = 143328 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 493 accagctgaaagttcttcactga 515 ||||||||||||||||||||||| Sbjct: 131989 accagctgaaagttcttcactga 131967 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 accagctgaaagttcttcac 512 |||||||||||||||||||| Sbjct: 128416 accagctgaaagttcttcac 128397
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 16896428 ctccctccgtctcaaaataagtg 16896406 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 16998688 ctccctccgtctcaaaataa 16998669 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 16436216 ctccctccgtcccaaaataagtgt 16436193 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 14674737 cctccgtctcaaaataagtg 14674718 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 11510017 cctccgtctcaaaataagtg 11509998
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 12821938 ctccctccgtctcaaaataagtg 12821960 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 20652231 cctccgtctcaaaataagtg 20652250 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 19292586 cctccgtctcaaaataagtg 19292567 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 18716957 cctccgtctcaaaataagtg 18716976 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 |||||||||||| ||||||||||| Sbjct: 18575389 ctccctccgtcttaaaataagtgt 18575412 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 16560298 cctccgtctcaaaataagtg 16560279 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 atgctccctccgtctcaaaataag 99 ||||||||||||||| |||||||| Sbjct: 14797841 atgctccctccgtcttaaaataag 14797864 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 8072343 ctccctccgtctcaaaataa 8072362 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 1020078 ctccctccgtctcaaaataa 1020097
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 26132177 ctccctccgtctcaaaataagtg 26132155 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 6073357 ctccctccgtctcaaaataagtg 6073335 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 gtatgctccctccgtctcaaaataag 99 |||| ||||||||||||||||||||| Sbjct: 27737678 gtatactccctccgtctcaaaataag 27737703 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 19274305 ctccctccgtctcaaaataag 19274325 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 |||| |||||||||||||||||||| Sbjct: 15207500 tgctacctccgtctcaaaataagtg 15207524 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 30599579 ctccctccgtcccaaaataagtgt 30599556 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 28111006 ctccctccgtcccaaaataagtgt 28111029 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 23268964 cctccgtctcaaaataagtg 23268945 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 19066296 ctccctccgtcccaaaataagtgt 19066319 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 17366127 ctccctccgtctcaaaataa 17366146 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 11826504 ctccctccgtcccaaaataagtgt 11826481 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 10001049 ctccctccgtcccaaaataagtgt 10001026 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 5638666 ctccctccgtcccaaaataagtgt 5638689 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 5273669 ctccctccgtcacaaaataagtgt 5273692 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 4995922 ctccctccgtctcaaaataa 4995903 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 4248483 ctccctccgtcccaaaataagtgt 4248460
>gb|AC109602.6| Oryza sativa chromosome 3 BAC OSJNBa0087M10 genomic sequence, complete sequence Length = 167397 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 124983 ctccctccgtctcaaaataagtg 124961
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 80880 ctccctccgtctcaaaataagtg 80858
>dbj|AP004263.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022E03 Length = 163032 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 125405 ctccctccgtctcaaaataagtg 125427
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 111422 ctccctccgtctcaaaataagtg 111400
>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644A02 Length = 144954 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 77856 ctccctccgtctcaaaataagtg 77834
>dbj|AP004837.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0483C08 Length = 143855 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 10813 ctccctccgtctcaaaataagtg 10835
>dbj|AP005322.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0677G01 Length = 137031 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 80696 ctccctccgtctcaaaataagtg 80718
>dbj|AP005702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0027G10 Length = 184759 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 129715 ctccctccgtctcaaaataagtg 129737
>gb|AY946486.1| Oryza sativa microRNA MIR433c-6 precursor, gene, partial sequence Length = 230 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 2 ctccctccgtctcaaaataagtg 24
>gb|AY109994.1| Zea mays CL768_1 mRNA sequence Length = 1906 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || ||||||| || | ||||||||||||||| || Sbjct: 1274 agctggaagttcttcacagatgcgactgtcaccctgcccctgaaattgaggcaccagcac 1215 Query: 556 tgcagttgttcatgccacc 574 ||||| || || ||||||| Sbjct: 1214 tgcagctgctcgtgccacc 1196 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaaca 415 ||||| ||||||||||||||||||| Sbjct: 1409 gggtaacggtagtccatggtgaaca 1385
>gb|AY108848.1| Zea mays PCO063380 mRNA sequence Length = 604 Score = 46.1 bits (23), Expect = 0.15 Identities = 44/51 (86%) Strand = Plus / Minus Query: 390 cgggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactg 440 |||||||| ||||||||||||||| | ||| ||||| | ||| |||||||| Sbjct: 151 cgggtagcagtagtccatggtgaagatgtccttgccgaccttcccaaactg 101
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 16905468 ctccctccgtctcaaaataagtg 16905446 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 17007728 ctccctccgtctcaaaataa 17007709 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 16444457 ctccctccgtcccaaaataagtgt 16444434 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 14682978 cctccgtctcaaaataagtg 14682959 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 11516457 cctccgtctcaaaataagtg 11516438
>emb|AL731591.3|OSJN00240 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039C07, complete sequence Length = 166410 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 105349 ctccctccgtctcaaaataagtg 105327
>gb|AC137619.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0095J22, complete sequence Length = 151730 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtg 101 ||||||||||||||||||||||| Sbjct: 5704 ctccctccgtctcaaaataagtg 5726
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtgt 102 |||| ||||||||||||||||||||| Sbjct: 89272 tgctacctccgtctcaaaataagtgt 89247
>ref|NM_031371.2| Homo sapiens AT rich interactive domain 4B (RBP1- like) (ARID4B), transcript variant 2, mRNA Length = 5807 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 3692 caccagctgaaagttcttcact 3671
>ref|NM_016374.4| Homo sapiens AT rich interactive domain 4B (RBP1- like) (ARID4B), transcript variant 1, mRNA Length = 6065 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 3950 caccagctgaaagttcttcact 3929
>ref|XM_514284.1| PREDICTED: Pan troglodytes similar to KIAA0117 protein (LOC457834), mRNA Length = 2036 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 399 caccagctgaaagttcttcact 378
>gb|BT018492.1| Zea mays clone EL01N0425D06.d mRNA sequence Length = 1326 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 390 cgggtagcggtagtccatggtgaaca 415 |||||| ||||||||||||||||||| Sbjct: 1053 cgggtaccggtagtccatggtgaaca 1028
>gb|BT018325.1| Zea mays clone EL01T0208B12.c mRNA sequence Length = 1103 Score = 44.1 bits (22), Expect = 0.61 Identities = 79/98 (80%) Strand = Plus / Minus Query: 496 agctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaacat 555 ||||| ||||||||||| || || || || || ||||| ||||| ||||||||||| || Sbjct: 739 agctggaagttcttcaccgaagcgacggtgacacgcccccggaagttgaggcaccagcac 680 Query: 556 tgcagttgttcatgccaccgaggagacttgttcttcag 593 ||||| || || ||||| || || | ||||||||||| Sbjct: 679 tgcagctgctcgtgccagcgcggggctttgttcttcag 642 Score = 40.1 bits (20), Expect = 9.5 Identities = 59/72 (81%) Strand = Plus / Minus Query: 391 gggtagcggtagtccatggtgaacaagtctttgcctatctttccaaactggagaatcacc 450 ||||| ||||||||||||||||| | || || || ||||| || |||||||| ||||| Sbjct: 850 gggtaccggtagtccatggtgaatatatccttcccgatcttcccgaactggaggatcact 791 Query: 451 ttgtcatgctcc 462 || || |||||| Sbjct: 790 ttctcctgctcc 779
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtct 104 ||||||||||| |||||||||||||| Sbjct: 11259 ctccctccgtcccaaaataagtgtct 11234
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 116734 ctccctccgtctcaaaataagt 116713
>gb|AF208045.2| Homo sapiens breast cancer-associated antigen BRCAA1 (BRCAA1) mRNA, complete cds Length = 5393 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 3282 caccagctgaaagttcttcact 3261
>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0013J02, complete sequence Length = 118026 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 21636 ctccctccgtctcaaaataagt 21615
>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0058G18, complete sequence Length = 175397 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataa 98 |||||||||||||||||||||| Sbjct: 166395 tgctccctccgtctcaaaataa 166416
>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014E11, complete sequence Length = 199348 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataa 98 |||||||||||||||||||||| Sbjct: 107329 tgctccctccgtctcaaaataa 107350
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 76 atgctccctccgtctcaaaataagtgtctc 105 ||||||||||||||||| ||||| |||||| Sbjct: 44164 atgctccctccgtctcacaataattgtctc 44193
>emb|AL133418.4| Human DNA sequence from clone RP5-835G14 on chromosome 1q42.1-43 Contains the 3' end of a novel gene (KIAA0117), the 3' end of the ARID4B gene for AT rich interactive domain 4B (RBP1- like), a novel gene and a CpG island, complete sequence Length = 77585 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 33023 caccagctgaaagttcttcact 33044
>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06, complete sequence Length = 127420 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 76 atgctccctccgtctcaaaataagtg 101 |||||||||||||| ||||||||||| Sbjct: 18747 atgctccctccgtcccaaaataagtg 18722
>emb|AJ400860.1|CAR400860 Cicer arietinum mRNA for tubby-like protein Length = 1722 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 399 gtagtccatggtgaacaagtctttgcctatctttccaaactg 440 ||||||||||||||| | ||||| || |||||||||||||| Sbjct: 1376 gtagtccatggtgaatatatcttttccgatctttccaaactg 1335
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 109 tttatactagttttagtataaagtta 134 ||||||||| |||||||||||||||| Sbjct: 40111 tttatactaattttagtataaagtta 40136 Score = 44.1 bits (22), Expect = 0.61 Identities = 55/66 (83%) Strand = Plus / Plus Query: 108 ctttatactagttttagtataaagttatactaagcttgaaacatttattttgaggcggag 167 |||||||||| | |||||||||||| || |||| || | |||||||||||| |||| || Sbjct: 8295 ctttatactaactctagtataaagttgtattaagtttaagacatttattttggggcgaag 8354 Query: 168 cgagta 173 ||||| Sbjct: 8355 ggagta 8360 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 ctccgtctcaaaataagtgtctca 106 ||||||||||||||||||| |||| Sbjct: 40169 ctccgtctcaaaataagtgactca 40146
>dbj|AK023144.1| Homo sapiens cDNA FLJ13082 fis, clone NT2RP3002056, weakly similar to RETINOBLASTOMA BINDING PROTEIN 1 Length = 3081 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 1004 caccagctgaaagttcttcact 983
>gb|AF214114.2| Homo sapiens retinoblastoma-binding protein 1-like 1 (RBBP1L1) mRNA, complete cds Length = 5804 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 3690 caccagctgaaagttcttcact 3669
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtct 104 ||||||||||| |||||||||||||| Sbjct: 8640 ctccctccgtcccaaaataagtgtct 8665
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 44.1 bits (22), Expect = 0.61 Identities = 34/38 (89%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcagctttatact 116 ||||||||||| |||| ||||||||||| |||| |||| Sbjct: 68192 ctccctccgtcccaaattaagtgtctcaactttgtact 68229 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 149 catttattttgaggcggagcgagtatta 176 |||||||||||| |||||||||||||| Sbjct: 75854 catttattttgaaacggagcgagtatta 75881
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 17676649 tccctccgtctcaaaataagtg 17676670 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 16509632 tccctccgtctcaaaataagtg 16509653 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 17579591 tgctccctccgtctcaaaata 17579611 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 7901738 cctccgtctcaaaataagtgt 7901718 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 27144034 ctccctccgtcccaaaataagtgt 27144057 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccgtctcaaaataagtgt 102 |||||||||||||||||||| Sbjct: 25561187 ctccgtctcaaaataagtgt 25561168 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 23667831 cctccgtctcaaaataagtg 23667850
>emb|AL662961.3|OSJN00164 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028M15, complete sequence Length = 187330 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 76 atgctccctccgtctcaaaataagtg 101 |||||||||||||| ||||||||||| Sbjct: 176977 atgctccctccgtcccaaaataagtg 176952
>dbj|AB210032.1| Homo sapiens mRNA for ARID4B variant protein, partial cds, clone: hh11923 Length = 5544 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 3861 caccagctgaaagttcttcact 3840
>dbj|AP004989.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1153E06 Length = 174588 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 gtatgctccctccgtctcaaaataag 99 |||| ||||||||||||||||||||| Sbjct: 86933 gtatactccctccgtctcaaaataag 86958
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 gtatgctccctccgtctcaaaataag 99 |||| ||||||||||||||||||||| Sbjct: 40187 gtatactccctccgtctcaaaataag 40212
>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1773_H01 Length = 146543 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 97173 ctccctccgtctcaaaataagt 97152
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 1244 ctccctccgtctcaaaataagt 1223
>gb|AY946549.1| Oryza sativa microRNA MIR438l-3 precursor, gene, partial sequence Length = 250 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 241 ctccctccgtctcaaaataagt 220
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagt 100 |||||||||||||||||||||| Sbjct: 64253 ctccctccgtctcaaaataagt 64232
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 tatgctccctccgtctcaaaataagt 100 ||||| |||||||||||||||||||| Sbjct: 23808 tatgcaccctccgtctcaaaataagt 23783
>dbj|AP004746.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0035F08 Length = 167446 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 tatgctccctccgtctcaaaataagt 100 ||||| |||||||||||||||||||| Sbjct: 94660 tatgcaccctccgtctcaaaataagt 94635
>gb|AF227899.1|AF227899 Homo sapiens breast carcinoma-associated antigen isoform I mRNA, partial cds Length = 4254 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 2167 caccagctgaaagttcttcact 2146
>gb|AF083249.1|AF083249 Homo sapiens Rb binding protein homolog mRNA, partial cds Length = 3218 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 1845 caccagctgaaagttcttcact 1824
>dbj|AB089821.1| Takifugu rubripes mRNA for intestine mucus lectin, complete cds Length = 527 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 586 ttcttcagcaccagcttctcttcgtc 611 |||||||||||||||||| ||||||| Sbjct: 361 ttcttcagcaccagcttcccttcgtc 336
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 17631020 tccctccgtctcaaaataagtg 17631041 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 16462865 tccctccgtctcaaaataagtg 16462886 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 17533962 tgctccctccgtctcaaaata 17533982 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 7901619 cctccgtctcaaaataagtgt 7901599 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 27069631 ctccctccgtcccaaaataagtgt 27069654 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 ctccgtctcaaaataagtgt 102 |||||||||||||||||||| Sbjct: 25489363 ctccgtctcaaaataagtgt 25489344 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 23596018 cctccgtctcaaaataagtg 23596037
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 104704 tccctccgtctcaaaataagtg 104683
>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155947 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 80 tccctccgtctcaaaataagtg 101 |||||||||||||||||||||| Sbjct: 64158 tccctccgtctcaaaataagtg 64137
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Plus Query: 71 acagtatgctccctccgtctcaaaataagt 100 ||||||| ||||||||||| |||||||||| Sbjct: 72705 acagtatactccctccgtcccaaaataagt 72734
>emb|AL133010.1|HSM801294 Homo sapiens mRNA; cDNA DKFZp434P176 (from clone DKFZp434P176) Length = 3520 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 1424 caccagctgaaagttcttcact 1403
>emb|AL133594.1|HSM801447 Homo sapiens mRNA; cDNA DKFZp434P249 (from clone DKFZp434P249); partial cds Length = 1286 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 492 caccagctgaaagttcttcact 513 |||||||||||||||||||||| Sbjct: 47 caccagctgaaagttcttcact 26
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtctcag 107 ||||||||||| |||||||| |||||||| Sbjct: 115842 ctccctccgtcccaaaataaatgtctcag 115870
>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017O06, complete sequence Length = 151656 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 126152 tgctccctccgtctcaaaata 126172
>gb|AY440171.1| Armigeres subalbatus ASAP ID: 39067 viral inhibitor of apoptosis associated factor 1 (viaf1) mRNA sequence Length = 709 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 tgcacagaaaataaattacat 201 ||||||||||||||||||||| Sbjct: 147 tgcacagaaaataaattacat 127
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||| ||||||||||| Sbjct: 126822 tgctccctccgtcccaaaataagtg 126846
>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12, complete sequence Length = 172647 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 8938 tgctccctccgtctcaaaata 8958
>gb|AC101886.16| Mus musculus chromosome 15, clone RP23-413E14, complete sequence Length = 233347 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcatgcacagaaaataaatta 198 ||||||||||||||||||||| Sbjct: 90363 tcatgcacagaaaataaatta 90343
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ttccccagcaccttgtttcat 327 ||||||||||||||||||||| Sbjct: 1152 ttccccagcaccttgtttcat 1172
>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence Length = 166128 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ttccccagcaccttgtttcat 327 ||||||||||||||||||||| Sbjct: 44779 ttccccagcaccttgtttcat 44759
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence Length = 203468 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 acagaaaataaattacataga 204 ||||||||||||||||||||| Sbjct: 4767 acagaaaataaattacataga 4787
>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence Length = 135248 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtc 103 |||||||||||||||||||| |||| Sbjct: 43095 ctccctccgtctcaaaataattgtc 43119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 43364 ctccctccgtctcaaaataa 43345
>emb|CR954192.2| Medicago truncatula chromosome 5 clone mth2-15h3, COMPLETE SEQUENCE Length = 118151 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtc 103 |||||||||| |||||||||||||| Sbjct: 24932 ctccctccgtttcaaaataagtgtc 24908
>emb|AL391995.7| Human DNA sequence from clone RP11-522N4 on chromosome 13, complete sequence Length = 178920 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 aaatgattgaaatgctgatat 389 ||||||||||||||||||||| Sbjct: 8452 aaatgattgaaatgctgatat 8472
>emb|AL391071.1| Human DNA sequence from clone RP11-539A6 on chromosome Xq21.33-22.3 Contains a novel gene, complete sequence Length = 82279 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcacagaaaataaattacata 202 ||||||||||||||||||||| Sbjct: 47367 gcacagaaaataaattacata 47347
>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase Length = 5574 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tttagtataaagttatactaa 140 ||||||||||||||||||||| Sbjct: 3937 tttagtataaagttatactaa 3957 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 tttagtataaagttatactaa 140 ||||||||||||||||||||| Sbjct: 3907 tttagtataaagttatactaa 3927
>emb|BX571874.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 16/17 Length = 349907 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 tcttcagcaccagcttctctt 607 ||||||||||||||||||||| Sbjct: 267432 tcttcagcaccagcttctctt 267412
>emb|AL731601.3|OSJN00245 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044M19, complete sequence Length = 188317 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 tccctccgtctcaaaataagt 100 ||||||||||||||||||||| Sbjct: 75139 tccctccgtctcaaaataagt 75119
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09, complete sequence Length = 159502 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 104337 tgctccctccgtctcaaaata 104357
>gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete sequence Length = 123581 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtc 103 ||||||||||||||||||| ||||| Sbjct: 74554 ctccctccgtctcaaaatatgtgtc 74530
>gb|DQ121375.1| Uncultured bacterium clone YC01A01, partial sequence Length = 39421 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 485 ctgaagccaccagctgaaagttctt 509 |||||||||||||||||| |||||| Sbjct: 21729 ctgaagccaccagctgaaggttctt 21753
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtc 103 ||||||||||| ||||||||||||| Sbjct: 98839 ctccctccgtcccaaaataagtgtc 98815
>dbj|AK081133.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930091H17 product:unclassifiable, full insert sequence Length = 1902 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 taatcatgcacagaaaataaa 195 ||||||||||||||||||||| Sbjct: 834 taatcatgcacagaaaataaa 814
>dbj|AB182945.1| Triticum aestivum Wknox1d gene for KN1 homeobox protein, complete cds Length = 9086 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtctcag 107 |||||||||| ||||||||||||||||| Sbjct: 6900 ctccctccgttccaaaataagtgtctcag 6872
>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete sequence Length = 135594 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 55553 tgctccctccgtctcaaaata 55533 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 95367 cctccgtctcaaaataagtg 95348
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 139778 ctccctccgtctcaaaataag 139758
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 atgctccctccgtctcaaaataagt 100 ||||| ||||||||||||||||||| Sbjct: 123205 atgcttcctccgtctcaaaataagt 123181
>gb|AC010336.8| Homo sapiens chromosome 19 clone CTD-3193O13, complete sequence Length = 160770 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 ttcttccagctgccatcattt 307 ||||||||||||||||||||| Sbjct: 129552 ttcttccagctgccatcattt 129532
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaataagtg 101 ||||||||||||| ||||||||||| Sbjct: 82676 tgctccctccgtcccaaaataagtg 82652
>gb|AF369906.1| Sorghum bicolor clone BAC10J22 Sbb3766 sequence Length = 152439 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtc 103 ||||||||||| ||||||||||||| Sbjct: 141015 ctccctccgtcccaaaataagtgtc 141039 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgtc 103 ||||||||||| ||||||||||||| Sbjct: 131447 ctccctccgtcccaaaataagtgtc 131471
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 69444 cctccgtctcaaaataagtgt 69464
>dbj|AP005763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0015G09 Length = 140893 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaataagtg 101 |||| |||||||||||||||||||| Sbjct: 82014 tgctacctccgtctcaaaataagtg 82038
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 112069 ctccctccgtctcaaaataag 112089
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0011P19 Length = 150811 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 30856 tgctccctccgtctcaaaata 30836
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataag 99 ||||||||||||||||||||| Sbjct: 86910 ctccctccgtctcaaaataag 86890
>dbj|AP003705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_E08 Length = 119926 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 gctccctccgtctcaaaataagtgt 102 |||||||||||| |||||||||||| Sbjct: 61513 gctccctccgtcccaaaataagtgt 61489
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 41132 cctccgtctcaaaataagtgt 41152
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07, complete sequence Length = 73187 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 63594 tgctccctccgtctcaaaata 63614
>emb|AL512546.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0410G08, complete sequence Length = 63554 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 18318 tgctccctccgtctcaaaata 18338
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tgctccctccgtctcaaaata 97 ||||||||||||||||||||| Sbjct: 71927 tgctccctccgtctcaaaata 71947
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtgt 102 ||||||||||||||||||||| Sbjct: 98432 cctccgtctcaaaataagtgt 98452
>gb|AF020791.1|AF020791 Hordeum vulgare ferrochelatase (hemH) gene, complete cds Length = 7694 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataagtgtc 103 |||||||||| |||||||||||||| Sbjct: 7324 ctccctccgtttcaaaataagtgtc 7300
>emb|AL844571.8| Mouse DNA sequence from clone RP23-224C23 on chromosome 2, complete sequence Length = 182273 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 taatcatgcacagaaaataaa 195 ||||||||||||||||||||| Sbjct: 46465 taatcatgcacagaaaataaa 46445
>ref|NM_001036481.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G47900 transcript variant AT2G47900.2 mRNA, complete cds Length = 1628 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tttccaaactggagaatcac 449 |||||||||||||||||||| Sbjct: 1269 tttccaaactggagaatcac 1250
>ref|NM_180150.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription factor AT2G47900 transcript variant AT2G47900.1 mRNA, complete cds Length = 1928 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 tttccaaactggagaatcac 449 |||||||||||||||||||| Sbjct: 1569 tttccaaactggagaatcac 1550
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 153971 cctccgtctcaaaataagtg 153952
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 11812 cctccgtctcaaaataagtg 11793
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 40.1 bits (20), Expect = 9.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 83 ctccgtctcaaaataagtgtctcagctttatactag 118 ||||||| ||||||||||||||| |||| |||||| Sbjct: 31518 ctccgtcccaaaataagtgtctccactttgtactag 31483
>gb|AC130600.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0048I21, complete sequence Length = 137650 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 54164 cctccgtctcaaaataagtg 54183
>ref|NM_190757.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1347 Score = 40.1 bits (20), Expect = 9.5 Identities = 65/80 (81%) Strand = Plus / Minus Query: 493 accagctgaaagttcttcactgacgcaaccgtcacccgcccacggaaattgaggcaccaa 552 |||||||| || ||||||||||| |||| || || || |||||||| || |||||||| Sbjct: 1151 accagctggaaattcttcactgaggcaatggtgacacggccacggaagttcaggcaccag 1092 Query: 553 cattgcagttgttcatgcca 572 || || || || |||||||| Sbjct: 1091 cactgtagctgctcatgcca 1072
>gb|AC108758.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0066E19, complete sequence Length = 145575 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 115380 cctccgtctcaaaataagtg 115399
>gb|U70541.1|OSU70541 Oryza sativa (indica cultivar-group) putative ADP-glucose pyrophosphorylase subunit SH2 and putative NADPH-dependent reductase A1 genes, complete cds Length = 30034 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 25103 ctccctccgtctcaaaataa 25084
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ctccctccgtctcaaaataa 98 |||||||||||||||||||| Sbjct: 5618 ctccctccgtctcaaaataa 5599
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 85985 cctccgtctcaaaataagtg 85966
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 106739 cctccgtctcaaaataagtg 106758
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 492 cctccgtctcaaaataagtg 511
>gb|AC092262.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C05 map C12819S, complete sequence Length = 113266 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 95338 cctccgtctcaaaataagtg 95357
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 43190 ctccctccgtcccaaaataagtgt 43213
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 319 ttgtttcattcacaagcaat 338 |||||||||||||||||||| Sbjct: 66506 ttgtttcattcacaagcaat 66487
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 110785 cctccgtctcaaaataagtg 110766
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 ctccctccgtctcaaaataagtgt 102 ||||||||||| |||||||||||| Sbjct: 107248 ctccctccgtcccaaaataagtgt 107271
>gb|AC108753.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0010B06, complete sequence Length = 129310 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 75802 cctccgtctcaaaataagtg 75783
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cctccgtctcaaaataagtg 101 |||||||||||||||||||| Sbjct: 79529 cctccgtctcaaaataagtg 79548 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,435,096 Number of Sequences: 3902068 Number of extensions: 7435096 Number of successful extensions: 158822 Number of sequences better than 10.0: 417 Number of HSP's better than 10.0 without gapping: 482 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 150590 Number of HSP's gapped (non-prelim): 8227 length of query: 692 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 669 effective length of database: 17,143,297,704 effective search space: 11468866163976 effective search space used: 11468866163976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
