>SEH1L_HUMAN (Q96EE3) Nucleoporin SEH1-like (SEC13-like protein)|
          Length = 421

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +2

Query: 260 SPV--SSQGAAAGRSLSSTLPACAGSLRQVSQYCSSPGTSVISPLSGTRSLNKWPSPAAD 433
           SPV  SSQ   +  SL ST+P+   SL       SS G    +PL   R+ ++W S A  
Sbjct: 324 SPVNGSSQQGTSNPSLGSTIPSLQNSLNG-----SSAGRYFFTPLDSPRAGSRWSSYAQL 378

Query: 434 RWTPP 448
              PP
Sbjct: 379 LPPPP 383

>ANSP_EIMTE (P15744) Sporozoite antigen|
          Length = 216

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 275 QGAAAGRSLSSTLPACA-GSLRQVSQYCSSPGTS 373
           QGAAAGRSL    PA A G  +Q S Y + P +S
Sbjct: 175 QGAAAGRSLGYGAPAAAYGQQQQPSSYGAPPASS 208

>ASLB_ECOLI (P25550) Probable arylsulfatase-activating protein aslB|
          Length = 411

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 16  GRCPKHALLLEVSALPTLNPHTAS-QRQPAYLPPLFR 123
           G CPKH  +L+ S  P LN   A  QR   +LPP  +
Sbjct: 350 GGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLK 386

>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +2

Query: 248 STSRSPVSSQGAAAGRSLSST--LPACAGSLRQVSQYCSSPGTSVISPLSGTRSLNKWPS 421
           ++S  P SS  AAA  SLSS+  +P+ + S+   S   +   +S  SPLS     + + S
Sbjct: 18  ASSSIPASSSSAAASTSLSSSSVIPSSSSSMLSSSSATAISSSSSSSPLSS----SSFTS 73

Query: 422 PAA 430
           PA+
Sbjct: 74  PAS 76

>APTH1_YEAST (Q12354) Acyl-protein thioesterase 1 (EC 3.1.2.-)|
          Length = 227

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 272 SQGAAAGRSLSSTLPACAGSLRQVSQYCSSPG 367
           SQGAA   + S TLP   G +  +S +CS PG
Sbjct: 119 SQGAALALATSVTLPWKIGGIVALSGFCSIPG 150

>CBID_PROMA (Q7VEH6) Putative cobalt-precorrin-6A synthase [deacetylating] (EC|
           2.1.1.-)
          Length = 381

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -2

Query: 527 DXVNMLLLDMFEKETSVHAASSLTGAREVSSGQQLVKAICSEIEYLKAERSRMCQEKSST 348
           + + + L+  FE+  S+ AA S+   +++S+ ++L K +  EIE  K     + + ++S+
Sbjct: 289 ERIPLSLIKEFEEAVSIEAALSILENKDISTAKKLWKRLAVEIE--KRSIDYVKRYETSS 346

Query: 347 VIPDAEILHRLE--GWTTSFVQQQLPGMILEIE 255
           +   A +  R     W  ++  +Q+    L++E
Sbjct: 347 IEIGAVMFDRARKIRWAGNYALKQINSFGLKLE 379

>MCPC_BACSU (P54576) Methyl-accepting chemotaxis protein mcpC|
          Length = 654

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 20/80 (25%), Positives = 37/80 (46%)
 Frame = -2

Query: 473 AASSLTGAREVSSGQQLVKAICSEIEYLKAERSRMCQEKSSTVIPDAEILHRLEGWTTSF 294
           A  S    + +S   +L++    E  +   E SRM  E++S +    E+L+ +     S 
Sbjct: 516 AEQSALSTKHISETVKLIQLETKEASHAMVEASRMNDEQNSAIHETGEVLNTITAEMQSL 575

Query: 293 VQQQLPGMILEIERSIFKEL 234
           V Q +  +  EI+R   ++L
Sbjct: 576 V-QGIDHIYAEIQRMSEEQL 594

>DMD_CANFA (O97592) Dystrophin|
          Length = 3680

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 20/87 (22%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
 Frame = -2

Query: 494 EKETSVHAASSLTGAR---EVSSGQQLVKAICSEIEYLKAERSRMCQEKSS--TVIPDAE 330
           EKE +V+   + TG +   EV S  Q +  + +++E  K    ++C       + + +  
Sbjct: 578 EKEDAVNKIHT-TGFKDQSEVLSNLQKLAVLKTDLEKKKQTMDKLCSLNQDLLSALKNTV 636

Query: 329 ILHRLEGWTTSFVQQQLPGMILEIERS 249
           + H++E W  +F  Q+   ++ ++E+S
Sbjct: 637 VAHKMEAWLDNFA-QRWDNLVQKLEKS 662

>I10R2_MOUSE (Q61190) Interleukin-10 receptor beta chain precursor (IL-10R-B)|
           (IL-10R2) (Cytokine receptor family 2 member 4)
           (Cytokine receptor class-II member 4) (CRF2-4) (CDw210b
           antigen)
          Length = 349

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 362 EKSSTVIP-DAEILHRLEGWTTSFVQQQLPGMILEIERS 249
           EK   V P D+E+L  LE WTT  +Q Q  G +L+  R+
Sbjct: 165 EKFQVVSPYDSEVLRNLEPWTTYCIQVQ--GFLLDQNRT 201

>ANKS1_MOUSE (P59672) Ankyrin repeat and SAM domain-containing protein 1A|
          Length = 1149

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
 Frame = +2

Query: 245  ISTSRSPVSSQGAAAGRSLSSTLPACAGSLRQVSQYCSSPGTS-------VISPLSGTRS 403
            IS + SP+S   +  GRS    LP+ A + R+       PGT+       V    S T+ 
Sbjct: 868  ISQTSSPLSQNDSCTGRSADLLLPS-ADTSRRRHDSLPDPGTASRADRFRVQEEPSETKL 926

Query: 404  LNKWPSPAADRWTPPWLR*ASWPHGP-RFLSQTC 502
              + PS AA     P+    SW H P + + ++C
Sbjct: 927  TLRPPSLAA-----PYAPVQSWQHQPEKLIFESC 955


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,691,838
Number of Sequences: 219361
Number of extensions: 1386803
Number of successful extensions: 4424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4420
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)