Clone Name | rbasd21c03 |
---|---|
Clone Library Name | barley_pub |
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 33.1 bits (74), Expect = 0.57 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%) Frame = -3 Query: 549 SSSPSRSIPDTHVPFGEDTVQRKSSRRKRSCMISSLTPRPNP--RLPS 412 S +P+R++P+ P E+T S R R+ +SSLT +P P R+P+ Sbjct: 2266 SEAPARALPED-APAFEETAASNSGRSSRTSYVSSLTSQPPPLRRVPN 2312
>GPSM3_HUMAN (Q9Y4H4) G-protein signaling modulator 3 (Activator of G-protein| signaling 4) (Protein G18) (G18.1b) Length = 160 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/68 (27%), Positives = 29/68 (42%) Frame = -2 Query: 556 FRQLVPVPQHSGYTRAFRGGHRATQIQQKKEELYDLIADAQAKSAASQRDRFVLKTLCTQ 377 +R P P G G A+ + + E L DL+A+AQ++ QR F + Sbjct: 33 WRSAPPSPPPPGTRHTALGPRSASLLSLQTELLLDLVAEAQSRRLEEQRATFYTPQNPSS 92 Query: 376 VKPRPHDP 353 + P P P Sbjct: 93 LAPAPLRP 100
>TRMD_TREPA (O83878) tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.31)| (M1G-methyltransferase) (tRNA [GM37] methyltransferase) Length = 250 Score = 30.4 bits (67), Expect = 3.7 Identities = 19/61 (31%), Positives = 31/61 (50%) Frame = -2 Query: 544 VPVPQHSGYTRAFRGGHRATQIQQKKEELYDLIADAQAKSAASQRDRFVLKTLCTQVKPR 365 VP SG+ R A QI++ + DL++ A+A +A +Q +LK L ++ P Sbjct: 188 VPPVLLSGHHAHIRTWRLARQIEKTRRNRPDLLSAARASAAWTQEAESLLKELDYELPPH 247 Query: 364 P 362 P Sbjct: 248 P 248
>PELI_DROME (O77237) Protein pellino| Length = 424 Score = 30.4 bits (67), Expect = 3.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +3 Query: 438 ASAMRSYSSSFFCWICVARCPPRKARVY 521 A M+S S F C I V RC P KAR++ Sbjct: 136 AKVMQSTISRFACRILVNRCEPAKARIF 163
>GUC2G_RAT (P55205) Guanylate cyclase 2G precursor (EC 4.6.1.2) (Guanylyl| cyclase receptor G) (GC-G) (Kinase-like domain-containing soluble guanylyl cyclase) (ksGC) Length = 1100 Score = 30.0 bits (66), Expect = 4.8 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 4/108 (3%) Frame = +3 Query: 198 ILRCSTGMHISCSTSLRAP*ARPPRVMQPVTKTNA--NAARLLAFLTVIISRH*GSCGLG 371 + R G+ I+ L + P + T TNA NA LA + R S +G Sbjct: 62 VQRLGAGLQIAVD-KLNSEPVGPGNLSWEFTYTNATCNAKESLAAFIDQVQREHISVLIG 120 Query: 372 LTCVQ--RVLSTNLSRWEAADLAWASAMRSYSSSFFCWICVARCPPRK 509 C + V+ S W+ + M + F+C CV PP++ Sbjct: 121 PACPEAAEVIGLLASEWDIPLFDFVGQMTALEDHFWCDTCVTLVPPKQ 168
>K0310_HUMAN (O15027) Protein KIAA0310| Length = 2179 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -3 Query: 555 FASSSPSRSIPDTHVPFGEDTVQRKSSRRKRSCMISSLTPRPNPRLPSET 406 FA+ +PSR++PD+ P G D ++ S + T RP ET Sbjct: 1872 FANLTPSRTVPDSEAPPGWDRADSGPTQPPLSLSPAPETKRPGQAAKKET 1921
>NTX2_NAJAT (Q9W717) Neurotoxin-like protein NTL2 precursor| Length = 86 Score = 29.6 bits (65), Expect = 6.3 Identities = 10/17 (58%), Positives = 12/17 (70%) Frame = +3 Query: 483 CVARCPPRKARVYPECC 533 C A CP +ARVY +CC Sbjct: 63 CAATCPKAEARVYVDCC 79
>ATRIP_DROME (Q9VVN4) ATR-interacting protein mus304 (Mutagen-sensivite protein| 304) Length = 846 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/55 (30%), Positives = 28/55 (50%) Frame = -3 Query: 507 FGEDTVQRKSSRRKRSCMISSLTPRPNPRLPSETDLCSRLSAHKSSPGHMTLNGA 343 F + Q+K+ R + +S L P+P + +RL+ H+S PG T NG+ Sbjct: 270 FSKLKTQQKAHERSMNSSMSILQAAPDPLEKRLSLRLNRLNIHRSVPGLKTDNGS 324
>KPC1B_CAEEL (P34885) Protein kinase C-like 1B (EC 2.7.11.13) (PKC1B)| Length = 707 Score = 29.3 bits (64), Expect = 8.2 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = -2 Query: 382 TQVKPRPHDPQWREIITVKKASKRAAFAFVFVTGCI 275 TQV+P+ ++P+W E T + A F C+ Sbjct: 52 TQVRPKTNEPRWNEEFTASGVHQGKAIGFSVFHSCV 87
>DIS3_SCHPO (P37202) Mitotic control protein dis3| Length = 970 Score = 29.3 bits (64), Expect = 8.2 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = +3 Query: 138 ASPSNKMLRLHS----TCFCSSLQILRCSTGMHISCSTS 242 A P +LR H+ T F S ILR GMH+ C TS Sbjct: 710 AFPQTAVLRRHAAPPLTNFDSLQDILRVCKGMHLKCDTS 748 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,602,844 Number of Sequences: 219361 Number of extensions: 1659112 Number of successful extensions: 5449 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5262 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5448 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)