Clone Name | rbasd20m22 |
---|---|
Clone Library Name | barley_pub |
>CHR2_SCHPO (O94486) Chitin synthase regulatory factor 2 (Chs four homolog 2)| Length = 512 Score = 32.7 bits (73), Expect = 0.84 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%) Frame = +1 Query: 40 SASHTEHYYTLT-HKHIEIICKNIAEQSFRAYITWSACLGLKN---TPGRGAESPRKGSP 207 SAS+ + L+ K +EI+ K +EQ+F + + +SA + +KN G P P Sbjct: 71 SASNIQSQRNLSPFKELEIVSKKKSEQTFSSAVDFSA-INVKNLNLKSGLFDPEPPSYDP 129 Query: 208 DIALSRRGLIGDKGKRVIF 264 D A ++R L D G +F Sbjct: 130 DYAFNQRSLQSDPGSDEMF 148
>ISA1_YEAST (Q07821) Iron sulfur assembly protein 1| Length = 250 Score = 30.0 bits (66), Expect = 5.4 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 1/83 (1%) Frame = +3 Query: 210 HRSLSKGADWRQGQKGHFHSLTTL*KCYQHDGIDETKPRVLESPQSESRAKR*DPMKF-R 386 HR LS G WR G G ++ I +T P +S +S+ P KF Sbjct: 15 HRFLSTGGFWRGGTNGTMSRTINNVNPFKLKFIPKTVPAAADSVSPDSQRPGKKPFKFIV 74 Query: 387 DLSIKINSYKQVPDWKQNAPPGR 455 K + + P W A P R Sbjct: 75 SNQSKSSKASKSPKWSSYAFPSR 97
>ARLY_VIBVY (Q7MH73) Bifunctional protein argH [Includes: Argininosuccinate| lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL); Probable acetyltransferase (EC 2.3.1.-)] Length = 624 Score = 29.6 bits (65), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 177 SSGSILQPQASRPCDICPKALLCDVLAYYFNM 82 +S S+L + + CD CP+ CD +A FN+ Sbjct: 582 TSKSLLPEKVLKDCDQCPRQHACDEVALEFNL 613
>ARLY_VIBVU (Q8DCM9) Bifunctional protein argH [Includes: Argininosuccinate| lyase (EC 4.3.2.1) (Arginosuccinase) (ASAL); Probable acetyltransferase (EC 2.3.1.-)] Length = 624 Score = 29.6 bits (65), Expect = 7.1 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 177 SSGSILQPQASRPCDICPKALLCDVLAYYFNM 82 +S S+L + + CD CP+ CD +A FN+ Sbjct: 582 TSKSLLPEKVLKDCDQCPRQHACDEVALEFNL 613
>KAD_STRCO (P43414) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)| Length = 217 Score = 29.3 bits (64), Expect = 9.3 Identities = 21/67 (31%), Positives = 31/67 (46%) Frame = +2 Query: 98 ARTSQSKALGHISHGRLAWG*RILPEEVLRVRGKDRQTSLSLEGG*LETRAKGSFSQSHH 277 A SQ LG ++ + G ++P+EV KDR EGG L + SQ+ Sbjct: 37 ANISQQTELGKLAKSYMNAG-NLVPDEVTIAMAKDRMEQPDAEGGFLLDGFPRNVSQAEA 95 Query: 278 LVKMLST 298 L ++L T Sbjct: 96 LDELLET 102
>GLR22_ARATH (Q9SHV1) Glutamate receptor 2.2 precursor (Ligand-gated ion channel| 2.2) Length = 920 Score = 29.3 bits (64), Expect = 9.3 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = +1 Query: 226 RGLIGDKGKRVIFTVSPPCENAINMTGSTRRSRGFWNHLNRSPEQKDKTR*SLGT 390 +GL GD V + P +NM G+ RS GFW N ++ D+ S+GT Sbjct: 368 KGLAGDF-HFVSGQLQPSVFEIVNMIGTGERSIGFWTEGNGLVKKLDQEPRSIGT 421 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,721,166 Number of Sequences: 219361 Number of extensions: 1977885 Number of successful extensions: 4664 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4511 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4662 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)