ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20m20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK062791.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C02, full insert sequence Length = 506 Score = 222 bits (112), Expect = 1e-54 Identities = 196/224 (87%) Strand = Plus / Minus Query: 315 ggaggaggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaaccca 374 |||||||| |||||||| || || |||| |||||| || |||||||||||||||| |||| Sbjct: 224 ggaggaggtttcttcttatagtttgctagactacagtgagggcagatgtattccagccca 165 Query: 375 tctgtcttcgcgtaatccttgaaagtgcccagcccttgccgtctatcacagccgaaatga 434 |||||||| || ||||||||||||||||| || ||||| ||||| ||||| || ||||| Sbjct: 164 tctgtctttgcataatccttgaaagtgcctaggccttgtcgtctgtcacaaccaaaatgt 105 Query: 435 gcccattcgccgcataaaccacagttcacccaatctccaggagcgctactgtgacaaagc 494 |||||||| || || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 104 gcccattcaccacacaaaccacagttcacccaatctccaggagcgctactgtggcaaagc 45 Query: 495 aaacagcactccccatccacatcgtcgtgcgatagctcatattc 538 |||||||| ||||| || ||||| || || | |||||||||||| Sbjct: 44 aaacagcattccccgtctacatcatcatgagctagctcatattc 1 Score = 60.0 bits (30), Expect = 9e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 61 ctgtgttgtcggttgttacatgctatcaaagacttaagct-cctacactgaaccaaatta 119 |||||||||| |||||||||| |||| || ||||||||| ||||| ||||||||||||| Sbjct: 457 ctgtgttgtcagttgttacattctatataaaacttaagcttcctacgctgaaccaaatta 398 Query: 120 at 121 || Sbjct: 397 at 396
>dbj|AK060745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E10, full insert sequence Length = 2122 Score = 178 bits (90), Expect = 1e-41 Identities = 204/242 (84%) Strand = Plus / Minus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 ||||||||||| || ||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 1868 ggcttcttcttatagttcgcgaggctgcagtgggggcagatatattccaacccatctgtc 1809 Query: 381 ttcgcgtaatccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccat 440 ||||| ||||||||||| ||||| |||||||||||||||||||| || || || |||||| Sbjct: 1808 ttcgcataatccttgaatgtgcctagcccttgccgtctatcacacccaaagtgcgcccat 1749 Query: 441 tcgccgcataaaccacagttcacccaatctccaggagcgctactgtgacaaagcaaacag 500 || ||||| || |||||||| |||||||| || ||||| |||||||| || || || ||| Sbjct: 1748 tcaccgcacaacccacagttaacccaatcacctggagcactactgtggcagagtaagcag 1689 Query: 501 cactccccatccacatcgtcgtgcgatagctcatattccagcaagtaggtctcgtagtgt 560 || |||||| | ||||| || || || || || ||||||| |||||| |||||||| ||| Sbjct: 1688 cattccccaccgacatcatcatgtgaaagttcgtattccaacaagtatgtctcgtaatgt 1629 Query: 561 ct 562 || Sbjct: 1628 ct 1627
>ref|XM_482707.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2890 Score = 170 bits (86), Expect = 3e-39 Identities = 203/242 (83%) Strand = Plus / Minus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 ||||||||||| || ||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 2637 ggcttcttcttatagttcgcgaggctgcagtgggggcagatatattccaacccatctgtc 2578 Query: 381 ttcgcgtaatccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccat 440 ||||| || |||||||| ||||| |||||||||||||||||||| || || || |||||| Sbjct: 2577 ttcgcatagtccttgaatgtgcctagcccttgccgtctatcacacccaaagtgcgcccat 2518 Query: 441 tcgccgcataaaccacagttcacccaatctccaggagcgctactgtgacaaagcaaacag 500 || ||||| || |||||||| |||||||| || ||||| |||||||| || || || ||| Sbjct: 2517 tcaccgcacaacccacagttaacccaatcacctggagcactactgtggcagagtaagcag 2458 Query: 501 cactccccatccacatcgtcgtgcgatagctcatattccagcaagtaggtctcgtagtgt 560 || |||||| | ||||| || || || || || ||||||| |||||| |||||||| ||| Sbjct: 2457 cattccccaccgacatcatcatgtgaaagttcgtattccaacaagtatgtctcgtaatgt 2398 Query: 561 ct 562 || Sbjct: 2397 ct 2396
>dbj|AK066110.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J22, full insert sequence Length = 2890 Score = 163 bits (82), Expect = 8e-37 Identities = 202/242 (83%) Strand = Plus / Minus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 ||||||||||| || ||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 2637 ggcttcttcttatagttcgcgaggctgcagtgggggcagatatattccaacccatctgtc 2578 Query: 381 ttcgcgtaatccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccat 440 ||||| || |||||||| ||||| | |||||||||||||||||| || || || |||||| Sbjct: 2577 ttcgcatagtccttgaatgtgcctaacccttgccgtctatcacacccaaagtgcgcccat 2518 Query: 441 tcgccgcataaaccacagttcacccaatctccaggagcgctactgtgacaaagcaaacag 500 || ||||| || |||||||| |||||||| || ||||| |||||||| || || || ||| Sbjct: 2517 tcaccgcacaacccacagttaacccaatcacctggagcactactgtggcagagtaagcag 2458 Query: 501 cactccccatccacatcgtcgtgcgatagctcatattccagcaagtaggtctcgtagtgt 560 || |||||| | ||||| || || || || || ||||||| |||||| |||||||| ||| Sbjct: 2457 cattccccaccgacatcatcatgtgaaagttcgtattccaacaagtatgtctcgtaatgt 2398 Query: 561 ct 562 || Sbjct: 2397 ct 2396
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 391 ccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccattcgccgcata 450 ||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| || || | Sbjct: 15882798 ccttgaaagtgcctaggccttgtcgtctgtcacaaccaaaatgtgcccattcaccacaca 15882857 Query: 451 aaccacagttcacccaatctccaggagcgctactg 485 ||||||||||||||||||||||||||||||||||| Sbjct: 15882858 aaccacagttcacccaatctccaggagcgctactg 15882892 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 483 ctgtgacaaagcaaacagcactccccatccacatcgtcgtgcgatagctcatattccagc 542 ||||| |||||||||||||| ||||| || ||||| || || | ||||||||||||||| Sbjct: 15882987 ctgtggcaaagcaaacagcattccccgtctacatcatcatgagctagctcatattccagt 15883046 Query: 543 aagtaggtctcgtagtgtcttttcagtgtgttcccgacacc 583 || || || ||||| ||||||||||||||||| || ||||| Sbjct: 15883047 aaatatgtttcgtaatgtcttttcagtgtgtttccaacacc 15883087 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 315 ggaggaggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaaccca 374 |||||||| |||||||| || || |||| |||||| || |||||||||||||||| |||| Sbjct: 15882644 ggaggaggtttcttcttatagtttgctagactacagtgagggcagatgtattccagccca 15882703 Query: 375 tctgtcttcgcgtaatcct 393 |||||||| || ||||||| Sbjct: 15882704 tctgtctttgcataatcct 15882722 Score = 60.0 bits (30), Expect = 9e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 61 ctgtgttgtcggttgttacatgctatcaaagacttaagct-cctacactgaaccaaatta 119 |||||||||| |||||||||| |||| || ||||||||| ||||| ||||||||||||| Sbjct: 15882411 ctgtgttgtcagttgttacattctatataaaacttaagcttcctacgctgaaccaaatta 15882470 Query: 120 at 121 || Sbjct: 15882471 at 15882472
>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1081_G10 Length = 107955 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 391 ccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccattcgccgcata 450 ||||||||||||| || ||||| ||||| ||||| || ||||| |||||||| || || | Sbjct: 45924 ccttgaaagtgcctaggccttgtcgtctgtcacaaccaaaatgtgcccattcaccacaca 45983 Query: 451 aaccacagttcacccaatctccaggagcgctactg 485 ||||||||||||||||||||||||||||||||||| Sbjct: 45984 aaccacagttcacccaatctccaggagcgctactg 46018 Score = 81.8 bits (41), Expect = 2e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 483 ctgtgacaaagcaaacagcactccccatccacatcgtcgtgcgatagctcatattccagc 542 ||||| |||||||||||||| ||||| || ||||| || || | ||||||||||||||| Sbjct: 46113 ctgtggcaaagcaaacagcattccccgtctacatcatcatgagctagctcatattccagt 46172 Query: 543 aagtaggtctcgtagtgtcttttcagtgtgttcccgacacc 583 || || || ||||| ||||||||||||||||| || ||||| Sbjct: 46173 aaatatgtttcgtaatgtcttttcagtgtgtttccaacacc 46213 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Plus Query: 315 ggaggaggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaaccca 374 |||||||| |||||||| || || |||| |||||| || |||||||||||||||| |||| Sbjct: 45770 ggaggaggtttcttcttatagtttgctagactacagtgagggcagatgtattccagccca 45829 Query: 375 tctgtcttcgcgtaatcct 393 |||||||| || ||||||| Sbjct: 45830 tctgtctttgcataatcct 45848 Score = 60.0 bits (30), Expect = 9e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Plus Query: 61 ctgtgttgtcggttgttacatgctatcaaagacttaagct-cctacactgaaccaaatta 119 |||||||||| |||||||||| |||| || ||||||||| ||||| ||||||||||||| Sbjct: 45537 ctgtgttgtcagttgttacattctatataaaacttaagcttcctacgctgaaccaaatta 45596 Query: 120 at 121 || Sbjct: 45597 at 45598
>gb|AY105342.1| Zea mays PCO101952 mRNA sequence Length = 587 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 |||||||||||||| || |||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 348 ggcttcttcttgtagtttgctaagctacagtgggggcagatgtattccaaaccatctgtc 407 Query: 381 ttcgcgtaatcct 393 || |||||||||| Sbjct: 408 ttagcgtaatcct 420 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 391 ccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccattcgccgcata 450 ||||||||||||| || ||||| ||||| || || || || ||||||||||| || |||| Sbjct: 499 ccttgaaagtgcctagtccttgtcgtctgtcgcaaccaaagtgagcccattcaccacata 558 Query: 451 aaccacagttcacccaatctcc 472 |||| ||||||||||||||||| Sbjct: 559 aaccgcagttcacccaatctcc 580
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 391 ccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccattcgccgcata 450 ||||||| ||||| |||||||||||||||||||| || || || |||||||| ||||| | Sbjct: 22032113 ccttgaatgtgcctagcccttgccgtctatcacacccaaagtgcgcccattcaccgcaca 22032172 Query: 451 aaccacagttcacccaatctccaggagcgctactg 485 | |||||||| |||||||| || ||||| |||||| Sbjct: 22032173 acccacagttaacccaatcacctggagcactactg 22032207 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 ||||||||||| || ||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 22031947 ggcttcttcttatagttcgcgaggctgcagtgggggcagatatattccaacccatctgtc 22032006 Query: 381 ttcgc 385 ||||| Sbjct: 22032007 ttcgc 22032011 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 24689710 aaaaggaagaaaagaaagag 24689691
>dbj|AP003798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_H01 Length = 128124 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 391 ccttgaaagtgcccagcccttgccgtctatcacagccgaaatgagcccattcgccgcata 450 ||||||| ||||| |||||||||||||||||||| || || || |||||||| ||||| | Sbjct: 117862 ccttgaatgtgcctagcccttgccgtctatcacacccaaagtgcgcccattcaccgcaca 117921 Query: 451 aaccacagttcacccaatctccaggagcgctactg 485 | |||||||| |||||||| || ||||| |||||| Sbjct: 117922 acccacagttaacccaatcacctggagcactactg 117956 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 321 ggcttcttcttgtaattcgctatactacaatgggggcagatgtattccaacccatctgtc 380 ||||||||||| || ||||| | || || ||||||||||| |||||||||||||||||| Sbjct: 117696 ggcttcttcttatagttcgcgaggctgcagtgggggcagatatattccaacccatctgtc 117755 Query: 381 ttcgc 385 ||||| Sbjct: 117756 ttcgc 117760
>ref|NM_114192.3| Arabidopsis thaliana DNA binding / protein binding / zinc ion binding AT3G43240 mRNA, complete cds Length = 2642 Score = 81.8 bits (41), Expect = 2e-12 Identities = 190/237 (80%), Gaps = 2/237 (0%) Strand = Plus / Minus Query: 363 tattccaacccatctgtcttcgcgtaatccttgaaagtgcccagcccttgccgtctatca 422 ||||||||||||||||| || || || |||||||| | ||| || || ||| ||| ||| Sbjct: 2467 tattccaacccatctgtttttgcatagtccttgaaggcgccgaggccaggccttctgtca 2408 Query: 423 cagccgaaatgagcccattcgccgcataaaccacagttcacccaatctccaggagcgcta 482 || |||||||||||||| || || ||| | |||||||||||||| || |||| | |||| Sbjct: 2407 catccgaaatgagcccactctccacatgatccacagttcacccagtcaccagctgtgcta 2348 Query: 483 ctgtgacaaagcaaacagcactccccatccacatcgtcgtgcg-atagctcatattccag 541 ||| |||| | ||||||||||| ||||| ||||| || || | ||| |||||| |||| Sbjct: 2347 ctgcgacatattaaacagcactctccatctacatcatcatgagcata-ctcatactccaa 2289 Query: 542 caagtaggtctcgtagtgtcttttcagtgtgttcccgacaccggtcattctatttgt 598 | || ||||| |||||||||||||| || || || ||||| |||||||| ||||| Sbjct: 2288 tagatacgtctcatagtgtcttttcagggtattacccacaccagtcattctgtttgt 2232
>gb|BT010580.1| Arabidopsis thaliana At3g43240 mRNA, complete cds Length = 2244 Score = 81.8 bits (41), Expect = 2e-12 Identities = 190/237 (80%), Gaps = 2/237 (0%) Strand = Plus / Minus Query: 363 tattccaacccatctgtcttcgcgtaatccttgaaagtgcccagcccttgccgtctatca 422 ||||||||||||||||| || || || |||||||| | ||| || || ||| ||| ||| Sbjct: 2165 tattccaacccatctgtttttgcatagtccttgaaggcgccgaggccaggccttctgtca 2106 Query: 423 cagccgaaatgagcccattcgccgcataaaccacagttcacccaatctccaggagcgcta 482 || |||||||||||||| || || ||| | |||||||||||||| || |||| | |||| Sbjct: 2105 catccgaaatgagcccactctccacatgatccacagttcacccagtcaccagctgtgcta 2046 Query: 483 ctgtgacaaagcaaacagcactccccatccacatcgtcgtgcg-atagctcatattccag 541 ||| |||| | ||||||||||| ||||| ||||| || || | ||| |||||| |||| Sbjct: 2045 ctgcgacatattaaacagcactctccatctacatcatcatgagcata-ctcatactccaa 1987 Query: 542 caagtaggtctcgtagtgtcttttcagtgtgttcccgacaccggtcattctatttgt 598 | || ||||| |||||||||||||| || || || ||||| |||||||| ||||| Sbjct: 1986 tagatacgtctcatagtgtcttttcagggtattacccacaccagtcattctgtttgt 1930
>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence Length = 123626 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 408 ccttgccgtctatcacagccgaaatgagcccattcgccgcataaaccacagttcaccca 466 |||||||| |||||||| || ||||||||||| || || || | ||||||||||||||| Sbjct: 116942 ccttgccgcctatcacaaccaaaatgagcccactcaccacacataccacagttcaccca 116884
>gb|AY271671.1| Gossypium barbadense fiber protein Fb21 mRNA, partial cds Length = 654 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 549 gtctcgtagtgtcttttcagtgtgttcccgacaccggtcattctatttgt 598 ||||| || ||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 62 gtctcataatgtcttttcagagtgttgccaacaccagtcattctatttgt 13
>gb|AC113173.2| Homo sapiens chromosome 1 clone RP4-724N10, complete sequence Length = 149950 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 231 gaaaaggaagaaaagaaagaggatt 255 ||||||||||||||||||||||||| Sbjct: 119714 gaaaaggaagaaaagaaagaggatt 119690
>gb|AC183502.5| Medicago truncatula clone mth2-75g17, complete sequence Length = 121928 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Minus Query: 411 tgccgtctatcacagccgaaatgagcccattcgccgcataaaccacagttcacccaatct 470 |||| ||| ||||||||||| || ||||| || || |||| ||||| ||||||||||| Sbjct: 46717 tgccttctgtcacagccgaagtgggcccactcaccacatatgccacaattcacccaatcc 46658 Query: 471 ccaggagcgctactgt 486 |||| ||| ||||||| Sbjct: 46657 ccagcagcactactgt 46642 Score = 40.1 bits (20), Expect = 8.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 483 ctgtgacaaagcaaacagcactccccatccacatcgtcgtgcgatagctcatattc 538 |||||||| ||||| ||||| || ||||||||||| || || | ||| |||||||| Sbjct: 46420 ctgtgacacagcaagcagcattctccatccacatcatcatgagctagttcatattc 46365
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagaggatt 255 |||||||||||||||||||||||| Sbjct: 4000731 aaaaggaagaaaagaaagaggatt 4000708
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagaggatt 255 |||||||||||||||||||||||| Sbjct: 4096231 aaaaggaagaaaagaaagaggatt 4096208
>gb|AC148003.2| Mus musculus BAC clone RP23-413H13 from chromosome 18, complete sequence Length = 205418 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagg 252 ||||||||||||||||||||||| Sbjct: 161662 agaaaaggaagaaaagaaagagg 161640
>gb|AC129598.4| Mus musculus BAC clone RP23-283O5 from chromosome 18, complete sequence Length = 213381 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagg 252 ||||||||||||||||||||||| Sbjct: 44156 agaaaaggaagaaaagaaagagg 44134
>emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0005N02, complete sequence Length = 175163 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagg 252 ||||||||||||||||||||||| Sbjct: 129071 agaaaaggaagaaaagaaagagg 129049
>emb|AL353871.1|ATF7K15 Arabidopsis thaliana DNA chromosome 3, BAC clone F7K15 Length = 110800 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 420 tcacagccgaaatgagcccattcgccgcataaaccacagttcaccca 466 ||||| |||||||||||||| || || ||| | |||||||||||||| Sbjct: 45888 tcacatccgaaatgagcccactctccacatgatccacagttcaccca 45934
>gb|AC008929.3| Homo sapiens chromosome 5, complete sequence Length = 125403 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaag 245 ||||||||||||||||||||||| Sbjct: 54671 gaagaacagaaaaggaagaaaag 54649
>gb|AC027347.5|AC027347 Homo sapiens chromosome 5 clone CTD-2562I21, complete sequence Length = 148193 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 223 gaagaacagaaaaggaagaaaag 245 ||||||||||||||||||||||| Sbjct: 29891 gaagaacagaaaaggaagaaaag 29913
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagg 252 ||||||||||||||||||||||| Sbjct: 28480396 agaaaaggaagaaaagaaagagg 28480374
>gb|AC092755.4| Homo sapiens chromosome 15 clone RP11-361D15 map 15q22, complete sequence Length = 187429 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaaag 249 |||||| |||||||||||||||||||| Sbjct: 32846 gaagaagagaaaaggaagaaaagaaag 32820
>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete sequence Length = 173411 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaaag 249 |||||| |||||||||||||||||||| Sbjct: 171044 gaagaagagaaaaggaagaaaagaaag 171018
>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete sequence Length = 155214 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagagga 253 |||||||||||||||||||||| Sbjct: 85442 aaaaggaagaaaagaaagagga 85421
>gb|AC069499.17| Homo sapiens 3 BAC RP11-381E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207942 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagag 251 |||||||||||||||||||||| Sbjct: 115734 agaaaaggaagaaaagaaagag 115713
>gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, complete sequence Length = 194600 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagaggatt 255 |||||||||||||||||||||| Sbjct: 65132 aaggaagaaaagaaagaggatt 65153
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagga 253 |||||||||||||||||||||| Sbjct: 180940 aaaaggaagaaaagaaagagga 180961
>emb|AL049482.1|ATF17A8 Arabidopsis thaliana DNA chromosome 4, BAC clone F17A8 (ESSA project) Length = 128071 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagga 253 |||||||||||||||||||||| Sbjct: 61639 aaaaggaagaaaagaaagagga 61660
>gb|AC163354.3| Mus musculus BAC clone RP23-49E21 from chromosome 12, complete sequence Length = 248060 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagagga 253 |||||||||||||||||||||| Sbjct: 192637 aaaaggaagaaaagaaagagga 192616
>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete sequence Length = 185080 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 12269 aagaaaagaaaaggaagaaaagaaag 12294
>gb|AC114668.12| Mus musculus chromosome 3, clone RP24-176P19, complete sequence Length = 183890 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 223 gaagaacagaaaaggaagaaaagaaa 248 |||||| ||||||||||||||||||| Sbjct: 115031 gaagaaaagaaaaggaagaaaagaaa 115056
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 agaacagaaaaggaagaaaagaaaga 250 |||||||||| ||||||||||||||| Sbjct: 1141403 agaacagaaagggaagaaaagaaaga 1141428
>gb|AC151895.4| Mus musculus BAC clone RP24-323A22 from chromosome 10, complete sequence Length = 224442 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 26968 aagaaaagaaaaggaagaaaagaaag 26993
>gb|AC120377.25| Mus musculus chromosome 3, clone RP24-262L5, complete sequence Length = 158004 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagag 251 |||||||||||||||||||||| Sbjct: 154661 agaaaaggaagaaaagaaagag 154682
>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence Length = 182140 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagag 251 |||||||||||||||||||||| Sbjct: 123650 agaaaaggaagaaaagaaagag 123629
>gb|AC123530.4| Mus musculus BAC clone RP24-194D2 from chromosome 10, complete sequence Length = 164420 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 104487 aagaaaagaaaaggaagaaaagaaag 104512
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 94168 aagaaaagaaaaggaagaaaagaaag 94193
>gb|AC090052.15| Homo sapiens 12 BAC RP11-295G12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150200 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagag 251 |||||||||||||||||||||| Sbjct: 132256 agaaaaggaagaaaagaaagag 132235
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 12632 aagaaaagaaaaggaagaaaagaaag 12657
>emb|BX322559.1|HSQ1L4 Homo sapiens chromosome 21 from cosmid LL21NC02-1L4 map 21q22.3 region D21S171-LA161, complete sequence Length = 45972 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaag 249 ||||| |||||||||||||||||||| Sbjct: 45703 aagaaaagaaaaggaagaaaagaaag 45728
>emb|CR974580.6| Mouse DNA sequence from clone RP23-97P6 on chromosome 12, complete sequence Length = 197896 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagaggatt 255 |||||||||||||||||||||| Sbjct: 153777 aaggaagaaaagaaagaggatt 153756
>emb|AL807793.7| Mouse DNA sequence from clone RP23-33N15 on chromosome 2, complete sequence Length = 221903 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 agaacagaaaaggaagaaaaga 246 |||||||||||||||||||||| Sbjct: 38899 agaacagaaaaggaagaaaaga 38878
>gb|AC101807.12| Mus musculus chromosome 18, clone RP24-251J22, complete sequence Length = 171409 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 aacagaaaaggaagaaaagaa 247 ||||||||||||||||||||| Sbjct: 93490 aacagaaaaggaagaaaagaa 93510
>ref|NM_188453.1| Oryza sativa (japonica cultivar-group), Ozsa8148 predicted mRNA Length = 1386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagg 252 ||||||||||||||||||||| Sbjct: 581 aaaaggaagaaaagaaagagg 601
>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete sequence Length = 156644 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 223 gaagaacagaaaaggaagaaa 243 ||||||||||||||||||||| Sbjct: 1473 gaagaacagaaaaggaagaaa 1493
>gb|AC114655.12| Mus musculus chromosome 1, clone RP24-160J12, complete sequence Length = 162542 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 57445 agaaaaggaagaaaagaaaga 57425
>gb|AC166779.3| Mus musculus chromosome 18, clone RP23-399N10, complete sequence Length = 200851 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 74286 agaaaaggaagaaaagaaaga 74306
>gb|AC147227.4| Mus musculus BAC clone RP23-153H22 from chromosome 18, complete sequence Length = 204482 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 84710 agaaaaggaagaaaagaaaga 84690
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 30283 aagaaaagaaaaggaagaaaagaaa 30307
>gb|AC161169.10| Mus musculus chromosome 5, clone RP24-102B13, complete sequence Length = 239061 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 55597 agaaaaggaagaaaagaaaga 55577
>gb|AC132342.3| Mus musculus BAC clone RP24-168N15 from chromosome 12, complete sequence Length = 165700 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaagagg 252 |||||||||||||||| |||| ||||||| Sbjct: 55661 aagaacagaaaaggaaaaaaaaaaagagg 55689
>gb|AC123031.4| Mus musculus BAC clone RP24-576D11 from chromosome 6, complete sequence Length = 143926 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 aacagaaaaggaagaaaagaaagag 251 |||||||| |||||||||||||||| Sbjct: 73757 aacagaaagggaagaaaagaaagag 73781
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagaggat 254 ||||||||||||||||||| ||||| Sbjct: 21918 agaaaaggaagaaaagaaaaaggat 21894
>ref|XM_642832.1| Entamoeba histolytica HM-1:IMSS Myb family DNA-binding protein (783.t00001) partial mRNA Length = 486 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 85 agaaaaggaagaaaagaaaga 105
>ref|XM_652198.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (3.t00038) partial mRNA Length = 1269 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 525 agaaaaggaagaaaagaaaga 545
>ref|XM_652210.1| Entamoeba histolytica HM-1:IMSS Myb family DNA-binding protein (3.t00050) partial mRNA Length = 486 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 85 agaaaaggaagaaaagaaaga 105
>gb|AC025540.7| Homo sapiens BAC clone RP11-295N22 from 7, complete sequence Length = 160896 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 15946 agaaaaggaagaaaagaaaga 15926
>gb|AC113003.9| Mus musculus chromosome 18, clone RP23-246G4, complete sequence Length = 162882 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 102934 agaaaaggaagaaaagaaaga 102954
>emb|AL773541.6| Human DNA sequence from clone DAQB-11J22 on chromosome 6 Contains the 3' end of the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcription factor IIH, polypeptide 4, 52kDa, the VARS2L gene for valyl-tRNA synthetase 2-like, the SFTPG gene for surfactant associated protein G, the HCG21 gene for HLA complex group 21, the DPCR1 gene for diffuse panbronchiolitis critical region, the C6orf205 gene for chromosome 6 open reading frame 205, and 4 CpG islands, complete sequence Length = 103780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 48795 agaaaaggaagaaaagaaaga 48775
>emb|AL669830.9| Human DNA sequence from clone XXbac-118E17 on chromosome 6 contains the GTF2H4 gene for general transcription factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, the gene for a novel protein, three putative novel transcripts, the gene for DPCR1 protein and six CpG islands, complete sequence Length = 156272 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 38013 agaaaaggaagaaaagaaaga 37993
>emb|AL662854.7| Human DNA sequence from clone XXbac-105N19 on chromosome 6 contains the DDR1 gene for discoidin domain receptor family, member 1, the GTF2H4 gene for general transcrition factor IIH, polypeptide 4, 52kDa, the gene for KIAA1885 protein, two putative novel transcripts, the gene for DPCR1 protein and four CpG islands, complete sequence Length = 84474 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 68652 agaaaaggaagaaaagaaaga 68632
>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the 5' end of the CAMK2G gene for calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma, the PLAU gene for plasminogen activator urokinase, three novel genes (FLJ35198), the 5' end of the VCL gene for vinculin and three CpG islands, complete sequence Length = 228098 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||||||||||| ||||||||||| Sbjct: 163143 aagaacagaaaagaaagaaaagaaa 163119
>gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence Length = 159466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 2742 agaaaaggaagaaaagaaaga 2722
>emb|AL138824.19| Human DNA sequence from clone RP11-14H3 on chromosome 6 Contains the 5' end of an 60S ribosomal protein L7 (RPL7) pseudogene, the 3' end of the CAP2 gene encoding adenylyl cyclase-associated protein 2, a pseudogene similar to SMT3H2, the FAM8A1 gene for family with sequence similarity 8 member A1, the 3'end of the NUP153 gene for nucleoporin 153kD and CpG islands, complete sequence Length = 96202 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 62199 agaaaaggaagaaaagaaaga 62179
>gb|AC016252.21| Homo sapiens 3 BAC RP11-461M2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164953 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 127614 agaaaaggaagaaaagaaaga 127594
>emb|Z34518.1|LESSRPSPG L.esculentum (cv. Rentita) mRNA for 54-kD signal recognition particle (SRP) specific protein Length = 9288 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 231 gaaaaggaagaaaagaaagag 251 ||||||||||||||||||||| Sbjct: 3067 gaaaaggaagaaaagaaagag 3087
>emb|X89598.1|GGCONECNG G.gallus mRNA for alpha subunit of cone photoreceptor CNG-channel Length = 2697 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagg 252 ||||||||||||||||||||| Sbjct: 574 aaaaggaagaaaagaaagagg 594
>emb|CR936875.3| Human DNA sequence from clone DAMC-336H8 on chromosome 6, complete sequence Length = 48852 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 41973 agaaaaggaagaaaagaaaga 41953
>gb|AC153582.10| Mus musculus 6 BAC RP23-432M19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 204239 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 49841 aagaagagaaaaggaagaaaagaaa 49817
>emb|AL645630.9| Mouse DNA sequence from clone RP23-8C1 on chromosome 11, complete sequence Length = 167898 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 165306 aagaaaagaaaaggaagaaaagaaa 165330
>emb|CR759747.7| Human DNA sequence from clone DADB-160J14 on chromosome 6, complete sequence Length = 114883 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 60060 agaaaaggaagaaaagaaaga 60040
>ref|NM_205221.1| Gallus gallus cyclic nucleotide gated channel alpha 3 (CNGA3), mRNA Length = 2697 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagg 252 ||||||||||||||||||||| Sbjct: 574 aaaaggaagaaaagaaagagg 594
>gb|AC125387.2| Homo sapiens chromosome 19 clone CTD-3056C15, complete sequence Length = 142667 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 47125 agaaaaggaagaaaagaaaga 47145
>gb|AC119396.3| Homo sapiens chromosome 19 clone CTB-133G6, complete sequence Length = 72539 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 223 gaagaacagaaaaggaagaaaagaaagag 251 |||||| ||||||| |||||||||||||| Sbjct: 41564 gaagaaaagaaaagaaagaaaagaaagag 41592
>gb|AC183387.3| Pan troglodytes BAC clone CH251-113M12 from chromosome unknown, complete sequence Length = 175955 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 9468 aagaaaagaaaaggaagaaaagaaa 9492
>gb|AC119397.2| Homo sapiens chromosome 19 clone CTD-2669L23, complete sequence Length = 100521 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 89025 agaaaaggaagaaaagaaaga 89005
>gb|AC022399.15| Homo sapiens chromosome 10 clone RP11-4G18, complete sequence Length = 173064 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaggaagaaaagaaagagga 253 ||||||||||||||||||||| Sbjct: 160979 aaaggaagaaaagaaagagga 160999
>gb|AC012123.8| Homo sapiens chromosome 18, clone RP11-57G22, complete sequence Length = 193486 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 4504 agaaaaggaagaaaagaaaga 4524
>gb|AC080106.6| Homo sapiens chromosome 11, clone RP11-62J13, complete sequence Length = 157637 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaggaagaaaagaaagagga 253 ||||||||||||||||||||| Sbjct: 134382 aaaggaagaaaagaaagagga 134402
>gb|AC090371.4| Homo sapiens chromosome 18, clone RP11-746B8, complete sequence Length = 173028 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 78949 agaaaaggaagaaaagaaaga 78929
>emb|AL773515.7| Mouse DNA sequence from clone RP23-391M19 on chromosome 4, complete sequence Length = 120211 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||||||||||||||| ||||||| Sbjct: 33945 aagaacagaaaaggaaggaaagaaa 33969
>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228481 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 5056 aagaagagaaaaggaagaaaagaaa 5080
>gb|AC159297.3| Mus musculus BAC clone RP23-258F9 from chromosome 12, complete sequence Length = 193434 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaagagg 252 |||||||||||||||| |||| ||||||| Sbjct: 18655 aagaacagaaaaggaaaaaaaaaaagagg 18627
>gb|AC122406.5| Mus musculus BAC clone RP24-126L14 from chromosome 17, complete sequence Length = 161377 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 99437 aagaaaagaaaaggaagaaaagaaa 99461
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagg 252 ||||||||||||||||||||| Sbjct: 6348871 aaaaggaagaaaagaaagagg 6348891
>gb|AC068287.5| Homo sapiens BAC clone RP11-532L9 from 2, complete sequence Length = 160222 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 40852 agaaaaggaagaaaagaaaga 40872
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 47358 aagaaaagaaaaggaagaaaagaaa 47334
>gb|AC009132.9| Homo sapiens chromosome 16 clone RP11-503F24, complete sequence Length = 216342 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 111653 agaaaaggaagaaaagaaaga 111633
>gb|AC100823.3| Homo sapiens chromosome 8, clone RP11-956J14, complete sequence Length = 191937 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaaagag 251 |||| ||| |||||||||||||||||||| Sbjct: 118674 gaaggacaaaaaaggaagaaaagaaagag 118646
>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence Length = 212775 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 160736 aagaaaagaaaaggaagaaaagaaa 160760
>gb|AC138917.2| Homo sapiens chromosome 5 clone RP11-630I7, complete sequence Length = 154824 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 229 cagaaaaggaagaaaagaaagagga 253 |||||||||||||| |||||||||| Sbjct: 91940 cagaaaaggaagaagagaaagagga 91916
>gb|AC016894.11| Homo sapiens BAC clone RP11-17D23 from 2, complete sequence Length = 135160 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 114179 agaaaaggaagaaaagaaaga 114199
>emb|BX470088.11| Zebrafish DNA sequence from clone DKEY-171E12 in linkage group 7, complete sequence Length = 102546 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 tgaaccaaattaatgggatgataat 132 |||||||||||||||| |||||||| Sbjct: 53065 tgaaccaaattaatggcatgataat 53041
>gb|AC112512.6| Homo sapiens 3 BAC RP11-717D12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176910 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 52417 aagaaaagaaaaggaagaaaagaaa 52441
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 997850 agaaaaggaagaaaagaaaga 997870 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 336596 aaaaggaagaaaagaaagag 336577
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0515G01 Length = 175072 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagagg 252 ||||||||||||||||||||| Sbjct: 119937 aaaaggaagaaaagaaagagg 119957
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 571672 agaaaaggaagaaaagaaaga 571692
>gb|AC107650.19| Mus musculus chromosome 6, clone RP23-133I9, complete sequence Length = 225883 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 148656 agaaaaggaagaaaagaaaga 148676
>gb|AC149589.2| Mus musculus BAC clone RP23-356I2 from 18, complete sequence Length = 225803 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 9513 agaaaaggaagaaaagaaaga 9493
>emb|AL953843.6| Zebrafish DNA sequence from clone DKEY-42P8 in linkage group 22, complete sequence Length = 212575 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 17287 agaaaaggaagaaaagaaaga 17267
>emb|BX901926.19| Zebrafish DNA sequence from clone CH211-195N20 in linkage group 1, complete sequence Length = 204799 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 117839 agaaaaggaagaaaagaaaga 117819
>dbj|AP001883.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-140O23, complete sequence Length = 143621 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaa 247 |||||| |||||||||||||||||| Sbjct: 91505 gaagaaaagaaaaggaagaaaagaa 91481
>gb|AC159104.2| Mus musculus BAC clone RP23-246E2 from chromosome 13, complete sequence Length = 203694 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaa 248 ||||| ||||||||||||||||||| Sbjct: 190124 aagaaaagaaaaggaagaaaagaaa 190148
>gb|AC111036.6| Mus musculus chromosome 18, clone RP24-80E15, complete sequence Length = 216052 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 147852 agaaaaggaagaaaagaaaga 147832
>dbj|AP000893.5| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-659G9, complete sequence Length = 198024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 aaaggaagaaaagaaagagga 253 ||||||||||||||||||||| Sbjct: 160973 aaaggaagaaaagaaagagga 160993
>emb|BX001019.7| Zebrafish DNA sequence from clone DKEY-13H9 in linkage group 16, complete sequence Length = 226271 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaa 244 ||||||||||||||||||||| Sbjct: 17123 aagaacagaaaaggaagaaaa 17103
>gb|AC005937.1|AC005937 Homo sapiens clone UWGC:370M23.002 from 6p21, complete sequence Length = 47323 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 23010 agaaaaggaagaaaagaaaga 23030
>emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chromosome 14, complete sequence Length = 139312 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaa 243 ||||||||||||||||||||| Sbjct: 81216 gaagaacagaaaaggaagaaa 81196
>emb|AL772137.8| Mouse DNA sequence from clone RP23-229A22 on chromosome 4, complete sequence Length = 165975 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 162375 agaaaaggaagaaaagaaaga 162355
>gb|AC171635.3| Rhesus Macaque CHR21 BAC CH250-374E17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 172069 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 39071 agaaaaggaagaaaagaaaga 39091
>emb|AL713989.20| Mouse DNA sequence from clone RP23-5I4 on chromosome 5, complete sequence Length = 215210 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 160598 agaaaaggaagaaaagaaaga 160578
>dbj|AB023048.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region, clone:53L9, complete sequence Length = 192650 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 165524 agaaaaggaagaaaagaaaga 165544
>emb|AL607127.12| Mouse DNA sequence from clone RP23-196B19 on chromosome 11, complete sequence Length = 79389 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaaga 250 ||||||||||||||||||||| Sbjct: 18973 agaaaaggaagaaaagaaaga 18993
>gb|AC157927.5| Mus musculus chromosome 3, clone RP24-85O24, complete sequence Length = 195262 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 226 gaacagaaaaggaagaaaagaaag 249 ||||||||| |||||||||||||| Sbjct: 67149 gaacagaaatggaagaaaagaaag 67172
>gb|AC166346.5| Mus musculus BAC clone RP24-83P13 from chromosome 16, complete sequence Length = 199678 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 190559 aaggaagaaaagaaagagga 190578
>ref|XM_483186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1951 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 686 aaaaggaagaaaagaaagag 705
>ref|NM_197252.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0062C05.26), mRNA Length = 408 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 319 aaggaagaaaagaaagagga 338
>gb|AC121510.10| Mus musculus chromosome 19, clone RP24-371N19, complete sequence Length = 168677 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 138383 aaggaagaaaagaaagagga 138364
>gb|AC113325.7| Mus musculus chromosome 1, clone RP23-453H23, complete sequence Length = 191225 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 24541 aaggaagaaaagaaagagga 24560
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 ccccatccacatcgtcgtgc 524 |||||||||||||||||||| Sbjct: 20270 ccccatccacatcgtcgtgc 20289
>gb|AC110194.11| Mus musculus chromosome 7, clone RP23-238J3, complete sequence Length = 223663 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 5161 agaaaaggaagaaaagaaag 5180
>gb|AY769268.1| Bombyx mori ribosomal protein P1 (RpP1) mRNA, complete cds Length = 537 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 352 aaggaagaaaagaaagagga 371
>gb|AC137853.21| Mus musculus chromosome 19, clone RP24-276L14, complete sequence Length = 173430 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 138108 aaggaagaaaagaaagagga 138127
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| ||||||| |||||||||||||| Sbjct: 600580 aagaaaagaaaagaaagaaaagaaagag 600553
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 131884 aaggaagaaaagaaagagga 131865
>gb|AC013353.9| Trypanosoma brucei chromosome 6 clone RPCI93-28P18, complete sequence Length = 149023 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| ||||||| |||||||||||||| Sbjct: 93040 aagaaaagaaaagaaagaaaagaaagag 93013
>gb|AC108504.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1654_B10, complete sequence Length = 140282 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 ccccatccacatcgtcgtgc 524 |||||||||||||||||||| Sbjct: 88289 ccccatccacatcgtcgtgc 88308
>gb|AC135569.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0018F17, complete sequence Length = 104291 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagaaaaggaagaaaagaaa 248 |||||||||||||||||||| Sbjct: 50382 cagaaaaggaagaaaagaaa 50401
>gb|BC072920.1| Xenopus laevis MGC80391 protein, mRNA (cDNA clone MGC:80391 IMAGE:5129908), complete cds Length = 4246 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagaaaaggaagaaaagaaa 248 |||||||||||||||||||| Sbjct: 679 cagaaaaggaagaaaagaaa 698
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 |||| ||||||||||||||||||| Sbjct: 48724 agaagaggaagaaaagaaagagga 48701
>gb|AF129756.1|DJ201G24 Homo sapiens MSH55 gene, partial cds; and CLIC1, DDAH, G6b, G6c, G5b, G6d, G6e, G6f, BAT5, G5b, CSK2B, BAT4, G4, Apo M, BAT3, BAT2, AIF-1, 1C7, LST-1, LTB, TNF, and LTA genes, complete cds Length = 184666 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 142649 aaaaggaagaaaagaaagag 142630
>gb|AF314650.1| Culicoides nubeculosus ribosomal P0 protein mRNA, partial cds Length = 237 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 172 aaggaagaaaagaaagagga 191
>ref|NG_000017.2| Homo sapiens protocadherin beta cluster (PCDHB@) on chromosome 5 Length = 257923 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 agaacagaaaaggaagaaaagaaa 248 |||| ||||||||||||||||||| Sbjct: 251989 agaaaagaaaaggaagaaaagaaa 251966
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete sequence Length = 221748 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaa 247 ||||| |||||||||||||||||| Sbjct: 205836 aagaaaagaaaaggaagaaaagaa 205859
>gb|AC162613.2| Mus musculus chromosome 19, clone RP24-270E10, complete sequence Length = 147306 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aaaggaagaaaagaaagagg 252 |||||||||||||||||||| Sbjct: 115216 aaaggaagaaaagaaagagg 115235
>gb|AC120386.12| Mus musculus chromosome 9, clone RP24-294A16, complete sequence Length = 207310 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aaaggaagaaaagaaagagg 252 |||||||||||||||||||| Sbjct: 134094 aaaggaagaaaagaaagagg 134075
>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence Length = 234816 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 7754 agaaaaggaagaaaagaaag 7735
>gb|AC102676.16| Mus musculus chromosome 14, clone RP23-266L19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 ggaagaaaagaaagaggatt 255 |||||||||||||||||||| Sbjct: 99776 ggaagaaaagaaagaggatt 99795
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence Length = 217251 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaaaga 250 |||||| |||| |||||||||||||||| Sbjct: 104802 gaagaagagaagaggaagaaaagaaaga 104775
>ref|XM_485359.3| PREDICTED: Mus musculus similar to Myosin light polypeptide 6 (Myosin light chain alkali 3) (Myosin light chain 3) (MLC-3) (LC17) (LOC433688), mRNA Length = 724 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 705 aaaaggaagaaaagaaagag 724
>ref|XM_852498.1| PREDICTED: Canis familiaris similar to protocadherin 9 isoform 1 precursor, transcript variant 3 (LOC476942), mRNA Length = 5789 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 2852 agaaaaggaagaaaagaaag 2871
>ref|XM_534142.2| PREDICTED: Canis familiaris similar to protocadherin 9 isoform 1 precursor, transcript variant 1 (LOC476942), mRNA Length = 4269 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 2945 agaaaaggaagaaaagaaag 2964
>ref|XM_843846.1| PREDICTED: Canis familiaris similar to protocadherin 9 isoform 1 precursor, transcript variant 2 (LOC476942), mRNA Length = 5882 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 2945 agaaaaggaagaaaagaaag 2964
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence Length = 169858 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 gaagaacagaaaaggaagaaaagaaaga 250 |||||| |||| |||||||||||||||| Sbjct: 156723 gaagaagagaagaggaagaaaagaaaga 156696
>ref|XM_643288.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein (466.t00001) partial mRNA Length = 2451 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 aacagaaaaggaagaaaagaaaga 250 ||||||||| |||||||||||||| Sbjct: 2232 aacagaaaatgaagaaaagaaaga 2255
>gb|AC122049.2| Mus musculus BAC clone RP24-456N19 from 16, complete sequence Length = 167576 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 4691 aaggaagaaaagaaagagga 4710
>gb|AC116679.9| Mus musculus chromosome 12, clone RP23-391I19, complete sequence Length = 261992 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 aaaggaagaaaagaaagagg 252 |||||||||||||||||||| Sbjct: 110888 aaaggaagaaaagaaagagg 110869
>gb|AC004850.3| Homo sapiens PAC clone RP4-665C4 from 7, complete sequence Length = 105891 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 227 aacagaaaaggaagaaaagaaaga 250 |||||| ||||||||||||||||| Sbjct: 68193 aacagagaaggaagaaaagaaaga 68170
>gb|AC010082.4| Homo sapiens BAC clone RP11-109D3 from 7, complete sequence Length = 143035 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gaaaaggaagaaaagaaaga 250 |||||||||||||||||||| Sbjct: 30529 gaaaaggaagaaaagaaaga 30510
>gb|AC004001.1| Homo sapiens BAC clone CTB-83J23 from 7, complete sequence Length = 95367 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 3568 agaaaaggaagaaaagaaag 3587
>gb|AC093775.2| Homo sapiens BAC clone RP11-138B9 from 7, complete sequence Length = 104892 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gaaaaggaagaaaagaaaga 250 |||||||||||||||||||| Sbjct: 97491 gaaaaggaagaaaagaaaga 97472
>gb|DP000038.2| Colobus guereza target 106 genomic scaffold Length = 481828 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 342065 agaaaaggaagaaaagaaag 342084
>ref|XM_737092.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000120.00.0) partial mRNA Length = 1833 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 661 aaggaagaaaagaaagagga 680
>gb|AC115754.7| Mus musculus chromosome 12, clone RP23-34D20, complete sequence Length = 217173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 43750 aaggaagaaaagaaagagga 43769
>gb|AC151742.9| Medicago truncatula clone mth2-83e4, complete sequence Length = 99595 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 71955 agaaaaggaagaaaagaaag 71974
>gb|AC161366.6| Mus musculus BAC clone RP24-230D17 from chromosome 9, complete sequence Length = 155733 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||||| |||||||||| Sbjct: 153533 agaaaaggaagaagagaaagagga 153510
>gb|AC138451.15| Medicago truncatula clone mth2-24k1, complete sequence Length = 123909 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 122232 agaaaaggaagaaaagaaag 122251
>gb|AC146909.23| Medicago truncatula clone mth2-57e16, complete sequence Length = 121218 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 77361 agaaaaggaagaaaagaaag 77380
>gb|AC163391.4| Mus musculus chromosome 3, clone RP23-173N16, complete sequence Length = 187855 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 140959 aaaaggaagaaaagaaagag 140978
>emb|BX248305.13| Human DNA sequence from clone DASS-82G15 on chromosome 6 Contains the UQCRHP1 pseudogene for ubiquinol-cytochrome c reductase hinge protein pseudogene 1, AIF1 gene for allograft inflammatory factor 1, the 5' end of the BAT2 gene for HLA-B associated transcript 2, and 1 CpG island, complete sequence Length = 16685 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 1659 aaaaggaagaaaagaaagag 1678
>emb|BX248519.7| Human DNA sequence from clone DASS-280D8 on chromosome 6 Contains the LTA gene for lymphotoxin alpha (TNF superfamily, member 1), the TNF gene for tumor necrosis factor (TNF superfamily, member 2), the LTB gene for lymphotoxin beta (TNF superfamily, member 3), the LST1 gene for leukocyte specific transcript 1, the NCR3 gene for natural cytotoxicity triggering receptor 3, and 1 CpG island, complete sequence Length = 40160 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 39819 aaaaggaagaaaagaaagag 39838
>emb|AL929587.5| Human DNA sequence from clone DAQB-87N14 on chromosome 6 Contains the 3'end of the NFKBIL1 gene, the nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha (TNF superfamily, member 1), the TNF gene for tumor necrosis factor (TNF superfamily, member 2), the LTB gene for lymphotoxin beta (TNF superfamily, member 3), the LST1 gene for leukocyte specific transcript 1, the NCR3 gene for natural cytotoxicity triggering receptor 3, the pseudogene UQCRHP1, ubiquinol-cytochrome c reductase hinge protein pseudogene 1 and 1 CpG island, complete sequence Length = 61358 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 55253 aaaaggaagaaaagaaagag 55272
>emb|BX119964.4| Human DNA sequence from clone RP1-267M5 on chromosome X Contains a NADH dehydrogenase 1 (MTND1) pseudogene, a NADH dehydrogenase 2 (MTND2) pseudogene and a zinc finger protein (ZFP) pseudogene, complete sequence Length = 93048 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 18366 agaaaaggaagaaaagaaag 18347
>emb|AL662801.7| Human DNA sequence from clone XXbac-296P20 on chromosome 6 contains a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the BAT3 gene for HLA-B associated transcript 3, the APOM gene for apolipoprotein M, the 3' end of the gene for chromosome 6, open reading frame 47 and four CpG islands, complete sequence Length = 132330 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 80087 aaaaggaagaaaagaaagag 80106
>emb|AL662847.6| Human DNA sequence from clone XXbac-270M2 on chromosome 6 contains the gene for a novel protein similar to similar to peptidyl-prolyl cis-trans isomerase A (PPIase), a ribosomal protein L15 (RPL15) pseudogene, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G, the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1, the LTA gene for lymphotoxin alpha, the TNF gene for tumour necrosis factor, the LTB gene for lymphotoxin beta, the LST1 gene for leukocyte specific transcript 1, the LY117 gene for lymphocyte antigen 117, the AIF1 gene for alograft imflammatory factor 1, the BAT2 gene for HLA-B associated transcript 2, the 3' end of the BAT3 gene for HLA-B associated transcript 3 and two CpG islands, complete sequence Length = 135784 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 93859 aaaaggaagaaaagaaagag 93878
>emb|AL591485.7| Human DNA sequence from clone RP11-293C4 on chromosome 6, complete sequence Length = 178428 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 107292 aaggaagaaaagaaagagga 107273
>emb|AL445685.18| Human DNA sequence from clone RP11-91A18 on chromosome 1 Contains the 5' end of the RAB3B gene for RAB3B member RAS oncogene family, a 40s ribosomal protein S26 (RPS26) pseudogene, the gene for endoplasmic reticulum thioredoxin superfamily member 18 kDa (TLP19), three novel genes, the 5' end of the gene for a novel protein similar to RNA polymerase B transcription factor 3 (MGC23908) and a CpG island, complete sequence Length = 142790 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 76022 aaaaggaagaaaagaaagag 76041
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 agaaaagaaagaggattaaacatt 262 |||||||||||||||||| ||||| Sbjct: 60320 agaaaagaaagaggattagacatt 60297
>emb|AL358112.20| Human DNA sequence from clone RP11-311B1 on chromosome 6, complete sequence Length = 91161 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 30727 agaaaaggaagaaaagaaag 30746
>emb|AL359511.16| Human DNA sequence from clone RP1-298M8 on chromosome 20 Contains the 5' end of the PCSK2 gene encoding proprotein convertase subtilisin/kexin type 2, a zinc finger protein (KRAB box) pseudogene and a CpG island, complete sequence Length = 63264 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 223 gaagaacagaaaaggaagaaaagaaaga 250 |||||| ||||||| ||||||||||||| Sbjct: 337 gaagaaaagaaaagaaagaaaagaaaga 364
>emb|AL359085.14| Human DNA sequence from clone RP11-113J24 on chromosome 13 Contains the 5' end of a novel gene, a novel gene (FLJ14624 FLJ31847), the 5' end of a novel gene (FLJ22153), COX5B (cytochrome c oxidase subunit Vb) pseudogene and two CpG islands, complete sequence Length = 152794 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 122080 agaaaaggaagaaaagaaag 122061
>emb|AL162590.15| Human DNA sequence from clone RP11-54K16 on chromosome 9p13.3-21.1 Contains a cancer/testis antigen 1 (CTAG1) (LAGE2B) pseudogene, the DNAJA1 gene for DnaJ (Hsp40) homolog, subfamily A, member 1, the gene for homolog of C. elegans smu-1 (SMU-1) (FLJ10805), the 5' end of the APTX gene for aprataxin and 3 CpG islands, complete sequence Length = 98271 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| ||||||| |||||||||||||| Sbjct: 77485 aagaaaagaaaagaaagaaaagaaagag 77512
>emb|AL163541.13| Human DNA sequence from clone RP11-358F13 on chromosome 13, complete sequence Length = 192305 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||| |||||||||||| Sbjct: 41092 agaaaaggaaggaaagaaagagga 41115
>emb|AL078604.10|HSJ393E18 Human DNA sequence from clone RP3-393E18 on chromosome 6q25.3-26 Contains a 60S Ribosomal protein L21 (RPL21) pseudogene, complete sequence Length = 116688 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| ||||||| |||||||||||||| Sbjct: 71926 aagaaaagaaaagaaagaaaagaaagag 71899
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 4155978 aaggaagaaaagaaagagga 4155959
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence Length = 984602 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 aagaaaagaaagaggattaa 257 |||||||||||||||||||| Sbjct: 897609 aagaaaagaaagaggattaa 897628
>ref|NM_001016282.2| Xenopus tropicalis heat shock 90kDa protein 1, alpha-like 3 (hspcal3), mRNA Length = 2862 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagagga 253 |||||| ||||||||||||||||| Sbjct: 773 agaaaaagaagaaaagaaagagga 796
>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5 Length = 335050 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 gaaaaggaagaaaagaaagaggat 254 ||||||| |||||||||||||||| Sbjct: 271582 gaaaagggagaaaagaaagaggat 271559
>emb|AL662920.14| Mouse DNA sequence from clone RP23-98M4 on chromosome 1 Contains part of the gene for ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and a novel gene, complete sequence Length = 146582 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 7576 aaggaagaaaagaaagagga 7595
>emb|AL645967.20| Mouse DNA sequence from clone RP23-82J18 on chromosome 11 Contains a novel pseudogene, complete sequence Length = 166549 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||| |||||||||||||||| Sbjct: 87273 agaaaagaaagaaaagaaagagga 87296
>emb|AL731818.6| Mouse DNA sequence from clone RP23-401L13 on chromosome 11 Contains two novel genes, the AI503894 gene for expressed sequence AI503894, a laminin receptor 1 (ribosomal protein SA)(Lamr1) pseudogene and a CpG island, complete sequence Length = 201664 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 38654 agaaaaggaagaaaagaaag 38673
>gb|AC067733.22| Homo sapiens 3 BAC RP11-148K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170124 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 158100 agaaaaggaagaaaagaaag 158119
>emb|CR925833.3| Human DNA sequence from clone DAMA-335N23 on chromosome 6, complete sequence Length = 11734 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 8718 aaaaggaagaaaagaaagag 8737
>emb|CR753892.5| Human DNA sequence from clone DADB-70P7 on chromosome 6, complete sequence Length = 101422 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 64294 aaaaggaagaaaagaaagag 64313
>gb|AC127165.4| Homo sapiens 12 BAC RP11-240I8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 97473 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 76590 aaggaagaaaagaaagagga 76609
>gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 40709 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 25824 aaggaagaaaagaaagagga 25843
>emb|CR759898.1| Human DNA sequence from clone XX-NCIH2171_7O06, complete sequence Length = 225281 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| |||||| ||||||||||||||| Sbjct: 219425 aagaaaagaaaaagaagaaaagaaagag 219452
>gb|AC069069.15| Homo sapiens 3 BAC RP11-460F1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 18451 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gaaaaggaagaaaagaaaga 250 |||||||||||||||||||| Sbjct: 11717 gaaaaggaagaaaagaaaga 11698
>gb|AC073581.23| Homo sapiens 8 BAC RP11-429O2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176601 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 135586 aaaaggaagaaaagaaagag 135605
>gb|AC092867.7| Homo sapiens 12p BAC RP11-100C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gaaaaggaagaaaagaaaga 250 |||||||||||||||||||| Sbjct: 67535 gaaaaggaagaaaagaaaga 67554
>gb|AC093418.2| Homo sapiens chromosome 3 clone RP11-1035L22, complete sequence Length = 206320 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 155572 aaaaggaagaaaagaaagag 155591
>gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173342 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gaaaaggaagaaaagaaaga 250 |||||||||||||||||||| Sbjct: 91327 gaaaaggaagaaaagaaaga 91346
>gb|AC099520.2| Homo sapiens chromosome 5 clone RP11-6N13, complete sequence Length = 180219 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 |||||||||||||||| ||||||| Sbjct: 117438 agaaaaggaagaaaaggaagagga 117415
>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence Length = 169476 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 94676 agaaaaggaagaaaagaaag 94695
>gb|AC013714.8| Homo sapiens chromosome , clone RP11-22P4, complete sequence Length = 140009 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 24466 agaaaaggaagaaaagaaag 24485
>gb|AC162374.4| Mus musculus BAC clone RP24-370I14 from chromosome 16, complete sequence Length = 157491 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 138713 aaggaagaaaagaaagagga 138694
>gb|AC158536.2| Mus musculus BAC clone RP23-29L19 from chromosome 13, complete sequence Length = 199663 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| ||||||| |||||||||||||| Sbjct: 51660 aagaaaagaaaagaaagaaaagaaagag 51633
>gb|AC102488.11| Mus musculus chromosome 1, clone RP24-496O18, complete sequence Length = 127076 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||||| |||||||||| Sbjct: 37666 agaaaaggaagaagagaaagagga 37643
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagaaaaggaagaaaagaaa 248 |||||||||||||||||||| Sbjct: 17076426 cagaaaaggaagaaaagaaa 17076445
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 18834148 aaggaagaaaagaaagagga 18834129
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 505 ccccatccacatcgtcgtgc 524 |||||||||||||||||||| Sbjct: 815847 ccccatccacatcgtcgtgc 815866
>gb|AC079467.2|AC079467 Homo sapiens chromosome 5 clone RP11-357D18, complete sequence Length = 141591 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 108491 aaaaggaagaaaagaaagag 108472
>gb|AC093387.6| Homo sapiens BAC clone RP11-613G12 from 2, complete sequence Length = 124250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gaacagaaaaggaagaaaag 245 |||||||||||||||||||| Sbjct: 28880 gaacagaaaaggaagaaaag 28861
>gb|AC157654.2| Mus musculus BAC clone RP24-286J10 from chromosome 13, complete sequence Length = 152221 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 29047 aaaaggaagaaaagaaagag 29028
>gb|AC068597.6| Homo sapiens BAC clone RP11-320L2 from 2, complete sequence Length = 153190 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 gaacagaaaaggaagaaaag 245 |||||||||||||||||||| Sbjct: 67708 gaacagaaaaggaagaaaag 67689
>gb|AC010145.10| Homo sapiens BAC clone RP11-355H10 from 2, complete sequence Length = 198960 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||||| |||||||||| Sbjct: 130718 agaaaaggaagaagagaaagagga 130695
>gb|AC104132.5| Homo sapiens BAC clone RP11-358L15 from 2, complete sequence Length = 25950 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaa 247 ||||| |||||||||||||||||| Sbjct: 12469 aagaaaagaaaaggaagaaaagaa 12492
>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence Length = 223367 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 agaacagaaaaggaagaaaagaaa 248 ||||||||||| |||||||||||| Sbjct: 40804 agaacagaaaaagaagaaaagaaa 40781
>gb|AC008459.7| Homo sapiens chromosome 5 clone CTC-352D11, complete sequence Length = 136581 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 125231 aaaaggaagaaaagaaagag 125250
>gb|AC132808.2| Homo sapiens chromosome 3 clone RP11-794P9, complete sequence Length = 195741 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 170482 aaaaggaagaaaagaaagag 170463
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 62014 aaaaggaagaaaagaaagag 61995
>dbj|BS000024.1| Pan troglodytes chromosome 22 clone:PTB-078F18, map 22, complete sequences Length = 70803 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 3481 aaaaggaagaaaagaaagag 3500
>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete sequences Length = 135513 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 133531 aaaaggaagaaaagaaagag 133550
>gb|AC109220.16| Mus musculus chromosome 7, clone RP23-84B11, complete sequence Length = 212018 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 11609 aaggaagaaaagaaagagga 11628
>dbj|AK120420.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M15, full insert sequence Length = 645 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 395 aaggaagaaaagaaagagga 414
>gb|AC154667.2| Mus musculus BAC clone RP23-153F8 from 16, complete sequence Length = 195017 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 23556 aaggaagaaaagaaagagga 23575
>emb|BX255920.4| Zebrafish DNA sequence from clone CH211-155K23 in linkage group 20, complete sequence Length = 92280 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 atgtattccaacccatctgtcttc 383 |||||||||||| ||||||||||| Sbjct: 22567 atgtattccaacacatctgtcttc 22544
>dbj|AK064018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H11, full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 686 aaaaggaagaaaagaaagag 705
>gb|AY105896.1| Zea mays PCO140796 mRNA sequence Length = 614 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 454 aaggaagaaaagaaagagga 473
>emb|AL135744.4|CNS01DVC Human chromosome 14 DNA sequence BAC R-524O1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 195766 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaaagaaagag 251 ||||| |||||| ||||||||||||||| Sbjct: 88010 aagaaaagaaaaagaagaaaagaaagag 88037
>emb|CR761606.2| Xenopus tropicalis finished cDNA, clone TGas033n20 Length = 2862 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagagga 253 |||||| ||||||||||||||||| Sbjct: 773 agaaaaagaagaaaagaaagagga 796
>gb|AC102370.13| Mus musculus chromosome 3, clone RP23-256D7, complete sequence Length = 191171 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 gaacagaaaaggaagaaaagaaag 249 ||||||||| |||||||||||||| Sbjct: 63696 gaacagaaatggaagaaaagaaag 63673
>dbj|AP002801.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-875G18, complete sequence Length = 218651 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 agaacagaaaaggaagaaaagaaa 248 |||| ||||||||||||||||||| Sbjct: 117107 agaaaagaaaaggaagaaaagaaa 117084
>gb|AC005752.1|AC005752 Homo sapiens chromosome 5, BAC clone 182a8 (LBNL H161), complete sequence Length = 101072 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 agaacagaaaaggaagaaaagaaa 248 |||| ||||||||||||||||||| Sbjct: 5935 agaaaagaaaaggaagaaaagaaa 5958
>emb|CR759905.4| Human DNA sequence from clone DAAP-300H15 on chromosome 6, complete sequence Length = 22140 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 17416 aaaaggaagaaaagaaagag 17435
>gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome 13, complete sequence Length = 159689 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||||||||| |||||| Sbjct: 142706 agaaaaggaagaaaagagagagga 142683
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 18845402 aaggaagaaaagaaagagga 18845383
>emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chromosome 6, complete sequence Length = 121656 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 43470 agaaaaggaagaaaagaaag 43489
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cagaaaaggaagaaaagaaa 248 |||||||||||||||||||| Sbjct: 17171107 cagaaaaggaagaaaagaaa 17171126
>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence Length = 162528 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagagga 253 ||||||||||||| |||||||||| Sbjct: 62041 agaaaaggaagaagagaaagagga 62064
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence Length = 173574 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 aagaacagaaaaggaagaaaagaa 247 ||||| |||||||||||||||||| Sbjct: 111782 aagaaaagaaaaggaagaaaagaa 111759
>emb|AL935127.9| Mouse DNA sequence from clone RP23-431O5 on chromosome 2, complete sequence Length = 98852 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaag 249 |||||||||||||||||||| Sbjct: 90844 agaaaaggaagaaaagaaag 90863
>emb|Y14768.1|HSY14768 Homo sapiens DNA, cosmid clones TN62 and TN82 Length = 81800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 12192 aaaaggaagaaaagaaagag 12173
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 210028 aaaaggaagaaaagaaagag 210009
>gb|AC158219.4| Mus musculus chromosome 8, clone RP23-189N10, complete sequence Length = 215819 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 aaaggaagaaaagaaagagg 252 |||||||||||||||||||| Sbjct: 84611 aaaggaagaaaagaaagagg 84630
>emb|AL671910.9| Mouse DNA sequence from clone RP23-245M12 on chromosome X, complete sequence Length = 141713 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 aagaacagaaaaggaagaaa 243 |||||||||||||||||||| Sbjct: 123088 aagaacagaaaaggaagaaa 123107
>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete sequence Length = 182529 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 230 agaaaaggaagaaaagaaagaggattaa 257 ||||||||||||| |||||| ||||||| Sbjct: 17002 agaaaaggaagaagagaaaggggattaa 17029
>emb|AL732540.4| Mouse DNA sequence from clone RP23-170L19 on chromosome 4, complete sequence Length = 190289 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 170750 aaaaggaagaaaagaaagag 170769
>gb|AC121505.14| Mus musculus chromosome 8, clone RP24-144M14, complete sequence Length = 163953 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 agaacagaaaaggaagaaaagaaa 248 |||||||||||| ||||||||||| Sbjct: 54463 agaacagaaaagaaagaaaagaaa 54486
>emb|Z15025.1|HSBAT2 Homo sapiens Bat2 gene Length = 38324 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 28771 aaaaggaagaaaagaaagag 28790
>gb|AC092956.5| Homo sapiens 3 BAC RP11-648O5 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194510 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 aaaaggaagaaaagaaagag 251 |||||||||||||||||||| Sbjct: 22933 aaaaggaagaaaagaaagag 22914 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aaggaagaaaagaaagagga 253 |||||||||||||||||||| Sbjct: 22885 aaggaagaaaagaaagagga 22866 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,474,508 Number of Sequences: 3902068 Number of extensions: 5474508 Number of successful extensions: 126339 Number of sequences better than 10.0: 244 Number of HSP's better than 10.0 without gapping: 244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 125201 Number of HSP's gapped (non-prelim): 1138 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
