ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21b15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
2dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
3dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
4emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, ... 48 0.040
5emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BA... 48 0.040
6emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, B... 48 0.040
7gb|AC007031.2| Homo sapiens BAC clone RP11-17I10 from 7, complet... 46 0.16
8emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on ... 44 0.62
9gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 42 2.5
10gb|AC133784.2| Homo sapiens BAC clone RP11-20G1 from 2, complete... 42 2.5
11emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 42 2.5
12emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chr... 42 2.5
13emb|BX679667.8| Mouse DNA sequence from clone RP24-424A15 on chr... 42 2.5
14emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chr... 42 2.5
15gb|AC027489.8| Homo sapiens chromosome , clone RP11-453M23, comp... 42 2.5
16emb|CR387995.6| Mouse DNA sequence from clone RP23-18L17 on chro... 42 2.5
17gb|AC102801.2| Homo sapiens chromosome 8, clone RP11-960P16, com... 42 2.5
18gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence 42 2.5
19gb|AC084336.6| Homo sapiens chromosome 8, clone RP11-625F15, com... 42 2.5
20emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chro... 42 2.5
21emb|BX890554.6| Mouse DNA sequence from clone RP23-291C10 on chr... 42 2.5
22gb|AC155820.2| Mus musculus BAC clone RP23-360J10 from chromosom... 42 2.5
23gb|AC002351.2| Homo sapiens 12 PAC RP1-46F2 (Roswell Park Cancer... 42 2.5
24emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chr... 42 2.5
25emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chr... 42 2.5
26emb|AL772200.10| Mouse DNA sequence from clone RP23-265N8 on chr... 42 2.5
27gb|AF130990.1|HSEDAR2 Homo sapiens ectodysplasin-A receptor prot... 42 2.5
28emb|CT573011.11| Mouse DNA sequence from clone RP23-330P11 on ch... 42 2.5
29gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, co... 42 2.5
30gb|AY612349.1| Desmognathus quadramaculatus voucher RMB2329 NADH... 42 2.5
31gb|AY612346.1| Desmognathus marmoratus voucher KHK90 NADH dehydr... 42 2.5
32gb|AY612345.1| Desmognathus marmoratus voucher KHK366 NADH dehyd... 42 2.5
33gb|AY612344.1| Desmognathus marmoratus voucher KHK18 NADH dehydr... 42 2.5
34gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome ... 42 2.5
35gb|AC141892.4| Mus musculus BAC clone RP23-388J12 from 13, compl... 42 2.5
36gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, com... 40 9.7
37gb|BC071818.1| Homo sapiens cDNA clone IMAGE:6592559, partial cds 40 9.7
38gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome... 40 9.7
39gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, comp... 40 9.7
40gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Ho... 40 9.7
41gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 40 9.7
42gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, com... 40 9.7
43ref|XM_842619.1| Leishmania major strain Friedlin hypothetical p... 40 9.7
44gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosom... 40 9.7
45emb|BX284671.5| Human DNA sequence from clone CTD-2298C19 on chr... 40 9.7
46gb|AC112491.4| Homo sapiens 3 BAC RP11-3P17 (Roswell Park Cancer... 40 9.7
47emb|AL355652.1|SPAC30C2 S.pombe chromosome I cosmid c30C2 40 9.7
48gb|AC053481.13| Homo sapiens chromosome 17, clone RP11-51L5, com... 40 9.7
49emb|AL954667.9| Zebrafish DNA sequence from clone CH211-214K3 in... 40 9.7
50gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete ... 40 9.7
51gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer... 40 9.7
52gb|AC117513.4| Homo sapiens 3 BAC RP11-451B8 (Roswell Park Cance... 40 9.7
53gb|AC108749.11| Homo sapiens 3 BAC RP11-288B15 (Roswell Park Can... 40 9.7
54gb|AC007535.3| Homo sapiens 12p13 BAC RPCI11-154I21 (Roswell Par... 40 9.7
55gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Canc... 40 9.7
56gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, com... 40 9.7
57gb|AC093793.2| Homo sapiens BAC clone RP11-272O16 from 4, comple... 40 9.7
58gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, co... 40 9.7
59gb|AC073429.6| Homo sapiens BAC clone RP11-775H9 from 4, complet... 40 9.7
60gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, co... 40 9.7
61gb|AC091857.3| Homo sapiens chromosome 5 clone CTD-2315L13, comp... 40 9.7
62ref|NM_001020088.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.7
63gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, co... 40 9.7
64gb|AC018763.6| Homo sapiens chromosome 5 clone CTD-2305C23, comp... 40 9.7
65gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, co... 40 9.7
66gb|AC124787.6| Mus musculus chromosome 18, clone RP24-395J18, co... 40 9.7
67gb|AC013412.3|AC013412 Homo sapiens BAC clone RP11-507A3 from Y,... 40 9.7
68ref|XM_216386.3| PREDICTED: Rattus norvegicus catenin alpha-like... 40 9.7
69gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, co... 40 9.7
70emb|CT027724.7| Zebrafish DNA sequence from clone CH211-128D6 in... 40 9.7
71emb|BX005455.8| Zebrafish DNA sequence from clone CH211-77K19 in... 40 9.7
72gb|AF094759.1|AF094759 Schistosoma mansoni retinoic acid recepto... 40 9.7
73emb|BX296559.14| Zebrafish DNA sequence from clone CH211-285F17 ... 40 9.7
74dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 9.7
75ref|NM_001017050.2| Xenopus tropicalis hypothetical protein LOC5... 40 9.7
76gb|BC075609.1| Xenopus tropicalis hypothetical protein LOC549804... 40 9.7
77dbj|AP006085.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 9.7
78emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on ch... 40 9.7
79emb|AL627079.23| Mouse DNA sequence from clone RP23-138E16 on ch... 40 9.7 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                    
Query: 477      ctggtattcctattccagtgtcataaacatcgaagcgaagccaaacaacttc 528
                ||||||||||||||||||| ||||| |||||  |||||||||||||||||||
Sbjct: 26427432 ctggtattcctattccagtatcatatacatcacagcgaagccaaacaacttc 26427381



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                            
Query: 313      aaatgttgacccttcattctctttgctaagcactgtgagagtaccacccatcaagtccac 372
                ||||||||| ||||||||||||||||| | ||| || ||||| ||||||||||| |||||
Sbjct: 26427869 aaatgttgatccttcattctctttgctgaccacagttagagtgccacccatcaactccac 26427810

                 
Query: 373      c 373
                |
Sbjct: 26427809 c 26427809



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                            
Query: 371      accaactgcttgcagaaagcaaggccaagccccatcccaccatattttgttgtatgtttc 430
                |||| ||||||||| |  ||||||||||||||  | || ||||||||| ||| ||| |  
Sbjct: 26427653 accagctgcttgcatatcgcaaggccaagccctgttccgccatattttcttgcatgatca 26427594

                                                     
Query: 431      tcattggcatgcatatacctcttgaacagaaacggca 467
                ||| | || ||||||||||||||||| || |||||||
Sbjct: 26427593 tcacttgcttgcatatacctcttgaatagcaacggca 26427557



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                            
Query: 542      tcatttgatggaatgccattctgatgagcttcttcatggtttgagcaacgcaaggtatct 601
                |||||||||||||||||| |||||  ||| |||||||| || ||||| | ||| ||||| 
Sbjct: 26427352 tcatttgatggaatgccagtctgacaagcatcttcatgattggagcagcccaaagtatca 26427293

                    
Query: 602      ttat 605
                ||||
Sbjct: 26427292 ttat 26427289
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>dbj|AP003579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0709F06
          Length = 170964

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                 
Query: 477   ctggtattcctattccagtgtcataaacatcgaagcgaagccaaacaacttc 528
             ||||||||||||||||||| ||||| |||||  |||||||||||||||||||
Sbjct: 39471 ctggtattcctattccagtatcatatacatcacagcgaagccaaacaacttc 39420



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                         
Query: 313   aaatgttgacccttcattctctttgctaagcactgtgagagtaccacccatcaagtccac 372
             ||||||||| ||||||||||||||||| | ||| || ||||| ||||||||||| |||||
Sbjct: 39908 aaatgttgatccttcattctctttgctgaccacagttagagtgccacccatcaactccac 39849

              
Query: 373   c 373
             |
Sbjct: 39848 c 39848



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                         
Query: 371   accaactgcttgcagaaagcaaggccaagccccatcccaccatattttgttgtatgtttc 430
             |||| ||||||||| |  ||||||||||||||  | || ||||||||| ||| ||| |  
Sbjct: 39692 accagctgcttgcatatcgcaaggccaagccctgttccgccatattttcttgcatgatca 39633

                                                  
Query: 431   tcattggcatgcatatacctcttgaacagaaacggca 467
             ||| | || ||||||||||||||||| || |||||||
Sbjct: 39632 tcacttgcttgcatatacctcttgaatagcaacggca 39596



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                         
Query: 542   tcatttgatggaatgccattctgatgagcttcttcatggtttgagcaacgcaaggtatct 601
             |||||||||||||||||| |||||  ||| |||||||| || ||||| | ||| ||||| 
Sbjct: 39391 tcatttgatggaatgccagtctgacaagcatcttcatgattggagcagcccaaagtatca 39332

                 
Query: 602   ttat 605
             ||||
Sbjct: 39331 ttat 39328
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>dbj|AP003565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085J13
          Length = 130185

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                                  
Query: 477    ctggtattcctattccagtgtcataaacatcgaagcgaagccaaacaacttc 528
              ||||||||||||||||||| ||||| |||||  |||||||||||||||||||
Sbjct: 125159 ctggtattcctattccagtatcatatacatcacagcgaagccaaacaacttc 125108



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 54/61 (88%)
 Strand = Plus / Minus

                                                                          
Query: 313    aaatgttgacccttcattctctttgctaagcactgtgagagtaccacccatcaagtccac 372
              ||||||||| ||||||||||||||||| | ||| || ||||| ||||||||||| |||||
Sbjct: 125596 aaatgttgatccttcattctctttgctgaccacagttagagtgccacccatcaactccac 125537

               
Query: 373    c 373
              |
Sbjct: 125536 c 125536



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                          
Query: 371    accaactgcttgcagaaagcaaggccaagccccatcccaccatattttgttgtatgtttc 430
              |||| ||||||||| |  ||||||||||||||  | || ||||||||| ||| ||| |  
Sbjct: 125380 accagctgcttgcatatcgcaaggccaagccctgttccgccatattttcttgcatgatca 125321

                                                   
Query: 431    tcattggcatgcatatacctcttgaacagaaacggca 467
              ||| | || ||||||||||||||||| || |||||||
Sbjct: 125320 tcacttgcttgcatatacctcttgaatagcaacggca 125284



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                          
Query: 542    tcatttgatggaatgccattctgatgagcttcttcatggtttgagcaacgcaaggtatct 601
              |||||||||||||||||| |||||  ||| |||||||| || ||||| | ||| ||||| 
Sbjct: 125079 tcatttgatggaatgccagtctgacaagcatcttcatgattggagcagcccaaagtatca 125020

                  
Query: 602    ttat 605
              ||||
Sbjct: 125019 ttat 125016
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>emb|AL161577.2|ATCHRIV73 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 73
          Length = 194862

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 439    atgcatatacctcttgaacagaaa 462
              ||||||||||||||||||||||||
Sbjct: 161332 atgcatatacctcttgaacagaaa 161355
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>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project)
          Length = 122322

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 439    atgcatatacctcttgaacagaaa 462
              ||||||||||||||||||||||||
Sbjct: 106501 atgcatatacctcttgaacagaaa 106478
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>emb|AL109787.1|ATT10C21 Arabidopsis thaliana DNA chromosome 4, BAC clone T10C21
          Length = 77860

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 439   atgcatatacctcttgaacagaaa 462
             ||||||||||||||||||||||||
Sbjct: 60217 atgcatatacctcttgaacagaaa 60240
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>gb|AC007031.2| Homo sapiens BAC clone RP11-17I10 from 7, complete sequence
          Length = 47042

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 100   ctaacagaacagtaaggaaactg 122
             |||||||||||||||||||||||
Sbjct: 16295 ctaacagaacagtaaggaaactg 16273
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>emb|Z99289.1|HS142L7 Human DNA sequence from clone RP1-142L7 on chromosome 6q21 Contains the
              3' end of the WISP3 gene for WNT1 inducible signaling
              pathway protein 3, the gene for epsilon tubulin, two novel
              genes, the 3' end of the LAMA4 gene for laminin alpha 4,
              the 5' end of a novel gene and a CpG island, complete
              sequence
          Length = 190778

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 370    caccaactgcttgcagaaagcaaggc 395
              |||||||||||| |||||||||||||
Sbjct: 175244 caccaactgcttacagaaagcaaggc 175269
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>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 30      ttttctaattcttgattacat 50
               |||||||||||||||||||||
Sbjct: 1674874 ttttctaattcttgattacat 1674854



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 30     ttttctaattcttgattacat 50
              |||||||||||||||||||||
Sbjct: 712277 ttttctaattcttgattacat 712257
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>gb|AC133784.2| Homo sapiens BAC clone RP11-20G1 from 2, complete sequence
          Length = 67535

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 393   ggccaagccccatcccaccat 413
             |||||||||||||||||||||
Sbjct: 33930 ggccaagccccatcccaccat 33950
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>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 15     atttatttgtatgtattttctaatt 39
              |||||||||||| ||||||||||||
Sbjct: 253745 atttatttgtatatattttctaatt 253769
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>emb|AL672021.11| Mouse DNA sequence from clone RP23-463M4 on chromosome X, complete
              sequence
          Length = 195259

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     atttgtatgtattttctaatt 39
              |||||||||||||||||||||
Sbjct: 156378 atttgtatgtattttctaatt 156398
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>emb|BX679667.8| Mouse DNA sequence from clone RP24-424A15 on chromosome X, complete
             sequence
          Length = 79203

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 44734 atttgtatgtattttctaatt 44754
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>emb|BX664732.7| Mouse DNA sequence from clone RP23-452F17 on chromosome X, complete
             sequence
          Length = 87723

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 61867 atttgtatgtattttctaatt 61887
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>gb|AC027489.8| Homo sapiens chromosome , clone RP11-453M23, complete sequence
          Length = 189706

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 411   catattttgttgtatgtttct 431
             |||||||||||||||||||||
Sbjct: 20256 catattttgttgtatgtttct 20236
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>emb|CR387995.6| Mouse DNA sequence from clone RP23-18L17 on chromosome X, complete
              sequence
          Length = 224892

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     atttgtatgtattttctaatt 39
              |||||||||||||||||||||
Sbjct: 173720 atttgtatgtattttctaatt 173700



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 19   atttgtatgtattttctaatt 39
            |||||||||||||||||||||
Sbjct: 6852 atttgtatgtattttctaatt 6832
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>gb|AC102801.2| Homo sapiens chromosome 8, clone RP11-960P16, complete sequence
          Length = 119671

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    tgcatttatttgtatgtattt 32
             |||||||||||||||||||||
Sbjct: 90168 tgcatttatttgtatgtattt 90188
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>gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence
          Length = 185123

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     tgcatttatttgtatgtattt 32
              |||||||||||||||||||||
Sbjct: 167116 tgcatttatttgtatgtattt 167096
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>gb|AC084336.6| Homo sapiens chromosome 8, clone RP11-625F15, complete sequence
          Length = 156235

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    tgcatttatttgtatgtattt 32
             |||||||||||||||||||||
Sbjct: 10987 tgcatttatttgtatgtattt 10967
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>emb|BX649624.8| Mouse DNA sequence from clone RP23-263M8 on chromosome X, complete
              sequence
          Length = 167883

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     atttgtatgtattttctaatt 39
              |||||||||||||||||||||
Sbjct: 158371 atttgtatgtattttctaatt 158391
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>emb|BX890554.6| Mouse DNA sequence from clone RP23-291C10 on chromosome X, complete
             sequence
          Length = 169236

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 62022 atttgtatgtattttctaatt 62042
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>gb|AC155820.2| Mus musculus BAC clone RP23-360J10 from chromosome 10, complete
             sequence
          Length = 221801

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 117   aaactgtaaaccacattcttt 137
             |||||||||||||||||||||
Sbjct: 55472 aaactgtaaaccacattcttt 55492
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>gb|AC002351.2| Homo sapiens 12 PAC RP1-46F2 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 149679

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    tgcatttatttgtatgtattt 32
             |||||||||||||||||||||
Sbjct: 65300 tgcatttatttgtatgtattt 65320
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>emb|BX682540.5| Mouse DNA sequence from clone RP23-383O14 on chromosome X, complete
             sequence
          Length = 191028

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 46914 atttgtatgtattttctaatt 46934
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>emb|BX001010.13| Mouse DNA sequence from clone RP23-18D18 on chromosome X, complete
             sequence
          Length = 227248

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 51875 atttgtatgtattttctaatt 51895
to top
>emb|AL772200.10| Mouse DNA sequence from clone RP23-265N8 on chromosome X, complete
             sequence
          Length = 195289

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 84248 atttgtatgtattttctaatt 84268
to top
>gb|AF130990.1|HSEDAR2 Homo sapiens ectodysplasin-A receptor protein (EDAR) gene, exons 2,
           3, and 4
          Length = 2475

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 393 ggccaagccccatcccaccat 413
           |||||||||||||||||||||
Sbjct: 864 ggccaagccccatcccaccat 844
to top
>emb|CT573011.11| Mouse DNA sequence from clone RP23-330P11 on chromosome X, complete
             sequence
          Length = 104602

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    atttgtatgtattttctaatt 39
             |||||||||||||||||||||
Sbjct: 37875 atttgtatgtattttctaatt 37895
to top
>gb|AC099692.4| Mus musculus chromosome 13, clone RP23-198N22, complete sequence
          Length = 216362

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 591  gcaaggtatctttatgagaaa 611
            |||||||||||||||||||||
Sbjct: 3090 gcaaggtatctttatgagaaa 3110
to top
>gb|AY612349.1| Desmognathus quadramaculatus voucher RMB2329 NADH dehydrogenase
            subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala,
            tRNA-Asx, tRNA-Cys, and tRNA-Tyr genes, complete
            sequence; and cytochrome oxidase subunit I (COI) gene,
            partial cds; mitochondrial
          Length = 1577

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   tgaagctacaactcaacacct 91
            |||||||||||||||||||||
Sbjct: 1375 tgaagctacaactcaacacct 1395
to top
>gb|AY612346.1| Desmognathus marmoratus voucher KHK90 NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asx,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome oxidase subunit I (COI) gene, partial cds;
            mitochondrial
          Length = 1577

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   tgaagctacaactcaacacct 91
            |||||||||||||||||||||
Sbjct: 1375 tgaagctacaactcaacacct 1395
to top
>gb|AY612345.1| Desmognathus marmoratus voucher KHK366 NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asx,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome oxidase subunit I (COI) gene, partial cds;
            mitochondrial
          Length = 1577

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   tgaagctacaactcaacacct 91
            |||||||||||||||||||||
Sbjct: 1375 tgaagctacaactcaacacct 1395
to top
>gb|AY612344.1| Desmognathus marmoratus voucher KHK18 NADH dehydrogenase subunit 2
            (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asx,
            tRNA-Cys, and tRNA-Tyr genes, complete sequence; and
            cytochrome oxidase subunit I (COI) gene, partial cds;
            mitochondrial
          Length = 1577

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 71   tgaagctacaactcaacacct 91
            |||||||||||||||||||||
Sbjct: 1375 tgaagctacaactcaacacct 1395
to top
>gb|AC164567.5| Mus musculus BAC clone RP23-64B8 from chromosome 10, complete sequence
          Length = 262262

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 117    aaactgtaaaccacattcttt 137
              |||||||||||||||||||||
Sbjct: 261619 aaactgtaaaccacattcttt 261639
to top
>gb|AC141892.4| Mus musculus BAC clone RP23-388J12 from 13, complete sequence
          Length = 219862

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 591    gcaaggtatctttatgagaaa 611
              |||||||||||||||||||||
Sbjct: 166863 gcaaggtatctttatgagaaa 166883
to top
>gb|AC118708.4| Mus musculus chromosome 7, clone RP24-118K11, complete sequence
          Length = 212638

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    tttgcccttctccaggagct 192
              ||||||||||||||||||||
Sbjct: 177979 tttgcccttctccaggagct 177960
to top
>gb|BC071818.1| Homo sapiens cDNA clone IMAGE:6592559, partial cds
          Length = 1474

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    aattgcatttatttgtatgt 28
            ||||||||||||||||||||
Sbjct: 1274 aattgcatttatttgtatgt 1293
to top
>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence
          Length = 179465

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 620    gaggcaggataatattctgt 639
              ||||||||||||||||||||
Sbjct: 103424 gaggcaggataatattctgt 103405
to top
>gb|AC156987.7| Mus musculus chromosome 7, clone RP23-78K13, complete sequence
          Length = 231140

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    tctggtattcctattccagt 495
              ||||||||||||||||||||
Sbjct: 225684 tctggtattcctattccagt 225703
to top
>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 196477

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 628   ataatattctgtctcagtgt 647
             ||||||||||||||||||||
Sbjct: 22887 ataatattctgtctcagtgt 22906
to top
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 167    accatctttgcccttctccaggag 190
              |||||||||||||||||| |||||
Sbjct: 200264 accatctttgcccttctcaaggag 200287
to top
>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence
          Length = 234816

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 476    tctggtattcctattccagt 495
              ||||||||||||||||||||
Sbjct: 216980 tctggtattcctattccagt 216961
to top
>ref|XM_842619.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0689)
           partial mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 167 accatctttgcccttctccaggag 190
           |||||||||||||||||| |||||
Sbjct: 570 accatctttgcccttctcaaggag 547
to top
>gb|AC139183.4| Mus musculus BAC clone RP24-114C21 from chromosome 18, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    cagccctggaccatctttgc 177
              ||||||||||||||||||||
Sbjct: 110176 cagccctggaccatctttgc 110157
to top
>emb|BX284671.5| Human DNA sequence from clone CTD-2298C19 on chromosome 1, complete
             sequence
          Length = 74045

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   cttgcagaaagcaaggccaa 398
             ||||||||||||||||||||
Sbjct: 14627 cttgcagaaagcaaggccaa 14608
to top
>gb|AC112491.4| Homo sapiens 3 BAC RP11-3P17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154758

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    ttgattacatacatatacta 60
             ||||||||||||||||||||
Sbjct: 34688 ttgattacatacatatacta 34707
to top
>emb|AL355652.1|SPAC30C2 S.pombe chromosome I cosmid c30C2
          Length = 20130

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 565   atgagcttcttcatggtttg 584
             ||||||||||||||||||||
Sbjct: 14824 atgagcttcttcatggtttg 14843
to top
>gb|AC053481.13| Homo sapiens chromosome 17, clone RP11-51L5, complete sequence
          Length = 176235

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    attgcatttatttgtatgtatttt 33
             |||||||||| |||||||||||||
Sbjct: 79482 attgcatttacttgtatgtatttt 79505
to top
>emb|AL954667.9| Zebrafish DNA sequence from clone CH211-214K3 in linkage group 25,
              complete sequence
          Length = 202657

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    ccttcattctctttgctaag 342
              ||||||||||||||||||||
Sbjct: 136619 ccttcattctctttgctaag 136638
to top
>gb|AC157490.18| Medicago truncatula clone mth2-123f23, complete sequence
          Length = 106571

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 17   ttatttgtatgtattttcta 36
            ||||||||||||||||||||
Sbjct: 7199 ttatttgtatgtattttcta 7218
to top
>gb|AC007953.21| Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 152210

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tttggaattgcatttatttg 23
              ||||||||||||||||||||
Sbjct: 123801 tttggaattgcatttatttg 123820
to top
>gb|AC117513.4| Homo sapiens 3 BAC RP11-451B8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166960

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   cctggaccatctttgccctt 181
             ||||||||||||||||||||
Sbjct: 82504 cctggaccatctttgccctt 82485
to top
>gb|AC108749.11| Homo sapiens 3 BAC RP11-288B15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 170796

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   cctggaccatctttgccctt 181
             ||||||||||||||||||||
Sbjct: 17236 cctggaccatctttgccctt 17255
to top
>gb|AC007535.3| Homo sapiens 12p13 BAC RPCI11-154I21 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 161339

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 625   aggataatattctgtctcag 644
             ||||||||||||||||||||
Sbjct: 54316 aggataatattctgtctcag 54297
to top
>gb|AC103549.6| Homo sapiens 3 BAC RP11-795G18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165139

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     tttggaattgcatttatttg 23
             ||||||||||||||||||||
Sbjct: 90824 tttggaattgcatttatttg 90805
to top
>gb|AC100783.2| Homo sapiens chromosome 18, clone RP11-141I4, complete sequence
          Length = 149913

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     tttgtatgtattttctaatt 39
              ||||||||||||||||||||
Sbjct: 100172 tttgtatgtattttctaatt 100153
to top
>gb|AC093793.2| Homo sapiens BAC clone RP11-272O16 from 4, complete sequence
          Length = 103392

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tttatttgtatgtattttct 35
             ||||||||||||||||||||
Sbjct: 67027 tttatttgtatgtattttct 67008
to top
>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 15     atttatttgtatgtattttctaattctt 42
              |||||||| ||||||||||||| |||||
Sbjct: 180880 atttatttctatgtattttctatttctt 180907
to top
>gb|AC073429.6| Homo sapiens BAC clone RP11-775H9 from 4, complete sequence
          Length = 114909

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aattgcatttatttgtatgt 28
             ||||||||||||||||||||
Sbjct: 73696 aattgcatttatttgtatgt 73677
to top
>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 15    atttatttgtatgtattttctaattctt 42
             |||||||| ||||||||||||| |||||
Sbjct: 61725 atttatttctatgtattttctatttctt 61752
to top
>gb|AC091857.3| Homo sapiens chromosome 5 clone CTD-2315L13, complete sequence
          Length = 135299

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    tgcatttatttgtatgtattttct 35
             ||||||||||| ||||||||||||
Sbjct: 19132 tgcatttatttttatgtattttct 19109
to top
>ref|NM_001020088.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC30C2.07),
           partial mRNA
          Length = 2529

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 565 atgagcttcttcatggtttg 584
           ||||||||||||||||||||
Sbjct: 65  atgagcttcttcatggtttg 84
to top
>gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, complete sequence
          Length = 207351

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   cagccctggaccatctttgc 177
             ||||||||||||||||||||
Sbjct: 98153 cagccctggaccatctttgc 98134
to top
>gb|AC018763.6| Homo sapiens chromosome 5 clone CTD-2305C23, complete sequence
          Length = 119974

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 12    tgcatttatttgtatgtattttct 35
             ||||||||||| ||||||||||||
Sbjct: 14317 tgcatttatttttatgtattttct 14340
to top
>gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, complete sequence
          Length = 183749

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    attgcatttatttgtatgtatttt 33
             |||| |||||||||||||||||||
Sbjct: 42056 attgtatttatttgtatgtatttt 42079
to top
>gb|AC124787.6| Mus musculus chromosome 18, clone RP24-395J18, complete sequence
          Length = 164628

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    cagccctggaccatctttgc 177
              ||||||||||||||||||||
Sbjct: 115715 cagccctggaccatctttgc 115696
to top
>gb|AC013412.3|AC013412 Homo sapiens BAC clone RP11-507A3 from Y, complete sequence
          Length = 200214

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    catttatttgtatgtatttt 33
             ||||||||||||||||||||
Sbjct: 30700 catttatttgtatgtatttt 30681
to top
>ref|XM_216386.3| PREDICTED: Rattus norvegicus catenin alpha-like 1 (predicted)
           (Catnal1_predicted), mRNA
          Length = 2290

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 257 tgtgaggagcatcattgtgc 276
           ||||||||||||||||||||
Sbjct: 717 tgtgaggagcatcattgtgc 698
to top
>gb|AC119196.12| Mus musculus chromosome 7, clone RP24-179I13, complete sequence
          Length = 165611

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    tttgcccttctccaggagct 192
              ||||||||||||||||||||
Sbjct: 162631 tttgcccttctccaggagct 162650
to top
>emb|CT027724.7| Zebrafish DNA sequence from clone CH211-128D6 in linkage group 19,
             complete sequence
          Length = 146035

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     aattgcatttatttgtatgtattt 32
             ||||| ||||||||||||||||||
Sbjct: 24927 aattgaatttatttgtatgtattt 24904
to top
>emb|BX005455.8| Zebrafish DNA sequence from clone CH211-77K19 in linkage group 19,
             complete sequence
          Length = 164741

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     aattgcatttatttgtatgtattt 32
             ||||| ||||||||||||||||||
Sbjct: 25471 aattgaatttatttgtatgtattt 25448
to top
>gb|AF094759.1|AF094759 Schistosoma mansoni retinoic acid receptor RXR mRNA, complete cds
          Length = 2853

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 324  cttcattctctttgctaagcactg 347
            |||||||| |||||||||||||||
Sbjct: 1156 cttcattccctttgctaagcactg 1133
to top
>emb|BX296559.14| Zebrafish DNA sequence from clone CH211-285F17 in linkage group 24,
             complete sequence
          Length = 171695

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tggaattgcatttatttgta 25
             ||||||||||||||||||||
Sbjct: 43735 tggaattgcatttatttgta 43716
to top
>dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874J12, complete
             sequence
          Length = 226147

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   ggtatctttatgagaaattt 614
             ||||||||||||||||||||
Sbjct: 83825 ggtatctttatgagaaattt 83844
to top
>ref|NM_001017050.2| Xenopus tropicalis hypothetical protein LOC549804 (LOC549804), mRNA
          Length = 1118

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 gcatatacctcttgaacaga 460
           ||||||||||||||||||||
Sbjct: 653 gcatatacctcttgaacaga 672
to top
>gb|BC075609.1| Xenopus tropicalis hypothetical protein LOC549804, mRNA (cDNA clone
           IMAGE:7000370)
          Length = 1118

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 gcatatacctcttgaacaga 460
           ||||||||||||||||||||
Sbjct: 653 gcatatacctcttgaacaga 672
to top
>dbj|AP006085.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28L24, TM0128,
             complete sequence
          Length = 98492

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ttcttgattacatacatata 57
             ||||||||||||||||||||
Sbjct: 31467 ttcttgattacatacatata 31486
to top
>emb|AL807385.11| Mouse DNA sequence from clone RP23-143B14 on chromosome 4, complete
             sequence
          Length = 221319

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 16    tttatttgtatgtattttctaattcttgatta 47
             |||||||||||| ||||||| ||| |||||||
Sbjct: 76148 tttatttgtatgcattttcttattattgatta 76179
to top
>emb|AL627079.23| Mouse DNA sequence from clone RP23-138E16 on chromosome 4, complete
             sequence
          Length = 146045

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tgcatttatttgtatgtatt 31
             ||||||||||||||||||||
Sbjct: 32157 tgcatttatttgtatgtatt 32138


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,697,378
Number of Sequences: 3902068
Number of extensions: 7697378
Number of successful extensions: 159303
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159031
Number of HSP's gapped (non-prelim): 272
length of query: 712
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 689
effective length of database: 17,143,297,704
effective search space: 11811732118056
effective search space used: 11811732118056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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