ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20m15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104701.1| Zea mays PCO096148 mRNA sequence 339 6e-90
2gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, comple... 327 2e-86
3ref|XM_472924.1| Oryza sativa (japonica cultivar-group), predic... 323 4e-85
4emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 323 4e-85
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 323 4e-85
6dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 4e-85
7ref|NM_125714.2| Arabidopsis thaliana unknown protein AT5G63190 ... 86 2e-13
8ref|NM_180924.1| Arabidopsis thaliana unknown protein AT5G63190 ... 86 2e-13
9gb|AY142667.1| Arabidopsis thaliana putative topoisomerase (At5g... 86 2e-13
10gb|AY039947.1| Arabidopsis thaliana putative topoisomerase (At5g... 86 2e-13
11gb|AY085894.1| Arabidopsis thaliana clone 19433 mRNA, complete s... 86 2e-13
12gb|DQ108755.1| Arabidopsis thaliana clone 17022 mRNA sequence 86 2e-13
13dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 86 2e-13
14ref|NM_118613.1| Arabidopsis thaliana unknown protein AT4G24800 ... 76 1e-10
15ref|NM_001036631.1| Arabidopsis thaliana unknown protein AT4G248... 76 1e-10
16emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, ... 76 1e-10
17emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC... 76 1e-10
18gb|AY124878.1| Arabidopsis thaliana AT4g24800/F6I7_10 mRNA, comp... 76 1e-10
19gb|AY062102.1| Arabidopsis thaliana AT4g24800/F6I7_10 mRNA, comp... 76 1e-10
20dbj|AK221703.1| Arabidopsis thaliana mRNA for hypothetical prote... 76 1e-10
21gb|BT018954.1| Zea mays clone Contig146.F mRNA sequence 72 2e-09
22gb|AY104255.1| Zea mays PCO124332 mRNA sequence 66 1e-07
23ref|NM_114699.3| Arabidopsis thaliana unknown protein AT3G48390 ... 54 5e-04
24emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, B... 54 5e-04
25gb|AY074567.1| Arabidopsis thaliana AT3g48390/T29H11_90 mRNA, co... 54 5e-04
26gb|BT002208.1| Arabidopsis thaliana At3g48390/T29H11_90 mRNA, co... 54 5e-04
27ref|NM_187687.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
28gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.008
29gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
31dbj|AK070688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
32ref|XM_479828.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.033
33dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
34dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
35dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.033
36dbj|AK104476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
37dbj|AK102447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
38dbj|AK067413.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
39dbj|AK060858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.033
40gb|BC070577.1| Xenopus laevis hypothetical protein MGC81066, mRN... 44 0.52
41emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on ch... 42 2.1
42emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 2.1
43gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putativ... 42 2.1
44gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
45ref|XM_587457.2| PREDICTED: Bos taurus similar to putative secre... 40 8.1
46gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, com... 40 8.1
47gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, co... 40 8.1
48gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, co... 40 8.1
49gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Can... 40 8.1
50gb|BC062441.1| Homo sapiens cDNA clone IMAGE:6621304, partial cds 40 8.1
51emb|CR547121.11| Zebrafish DNA sequence from clone DKEY-118G10 i... 40 8.1
52emb|Z70226.1|HSV1077H7 Human DNA sequence from clone GHc-1077H7 ... 40 8.1
53emb|AL590396.13| Human DNA sequence from clone RP11-193H5 on chr... 40 8.1
54emb|AL590069.5| Human DNA sequence from clone RP11-353J17 on chr... 40 8.1
55gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 8.1
56gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Canc... 40 8.1
57gb|AC092793.5| Homo sapiens 12p BAC RP11-74N9 (Roswell Park Canc... 40 8.1
58gb|AC097504.3| Homo sapiens BAC clone RP11-362F19 from 4, comple... 40 8.1
59emb|AL953914.11| Zebrafish DNA sequence from clone CH211-235I18 ... 40 8.1
60dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
61dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
62dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
63gb|AY141876.1| Triticum aestivum cultivar TAM104R gag polyprotei... 40 8.1
64dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 8.1 
>gb|AY104701.1| Zea mays PCO096148 mRNA sequence
          Length = 2251

 Score =  339 bits (171), Expect = 6e-90
 Identities = 357/419 (85%)
 Strand = Plus / Minus

                                                                        
Query: 162  gctcagggcagggaggcgaaggaaggtagcagccagccgcgctctgtcgcaagctccacg 221
            |||||||| | |||||||||||  || |||||||||||||||||||| || |||||||| 
Sbjct: 1977 gctcagggaacggaggcgaaggtcggcagcagccagccgcgctctgttgccagctccaca 1918

                                                                        
Query: 222  tagcctctgaacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttcc 281
            ||  |||  ||||||||||| || ||||||||||| ||| ||||||| || |||||||||
Sbjct: 1917 tactctccaaacttctcctgggcatttgggatgtcgaggatcagatcatcaaggccttcc 1858

                                                                        
Query: 282  ttgacacgagcaaaaccgttggtcatctggttgatggttatcagcccctccccggagcac 341
            |||||||| ||||| || ||||||||||||||||||||||| |||||||| ||| | |||
Sbjct: 1857 ttgacacgggcaaagcctttggtcatctggttgatggttatgagcccctcgccgaaacac 1798

                                                                        
Query: 342  tcctgcaagagagccaagatgctagcttcattctgcttctccatcgccatcaccagcgct 401
            |||||||  ||  |||||||||| |  ||||||||||||||||||||||| ||||| || 
Sbjct: 1797 tcctgcagcaggaccaagatgctggtgtcattctgcttctccatcgccatgaccagtgcc 1738

                                                                        
Query: 402  ttcttcaccacttcatggttgaagaagggcatcccaaggtcacggatacactggcaggct 461
            ||||| ||||| |||||||||||||||||||||||||| |||||||| ||   |||||||
Sbjct: 1737 ttctttaccacctcatggttgaagaagggcatcccaagatcacggatgcatctgcaggct 1678

                                                                        
Query: 462  tccttcaggtccccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcg 521
            ||    ||||| || || |||||||| ||||| |  ||||| | |||||||||||| |  
Sbjct: 1677 tctcctaggtcaccaccagtgttgtattcctccaatagcttagtgatcttgtccttagta 1618

                                                                       
Query: 522  tcttccacagcccagccagtgcccccgccccagcagcgcagtatcctctcaccagaatg 580
            |||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 1617 tcttccacagcccatccagtgccaccgccccagcaccgcagtatccgctcaccagaatg 1559
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>gb|AY596597.1| Saccharum officinarum clone SCCCLR1C01H06, complete sequence
          Length = 2436

 Score =  327 bits (165), Expect = 2e-86
 Identities = 345/405 (85%)
 Strand = Plus / Minus

                                                                        
Query: 173  ggaggcgaaggaaggtagcagccagccgcgctctgtcgcaagctccacgtagcctctgaa 232
            |||||||||||  || |||||||||||||||||||| || |||||||| ||  |||  ||
Sbjct: 2162 ggaggcgaaggtcggcagcagccagccgcgctctgttgcgagctccacatactctccaaa 2103

                                                                        
Query: 233  cttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacgagc 292
            ||||||||| || ||||||||||| ||| ||||||| || ||||||||||||||||| ||
Sbjct: 2102 cttctcctgagcatttgggatgtcgaggatcagatcatcaaggccttccttgacacgggc 2043

                                                                        
Query: 293  aaaaccgttggtcatctggttgatggttatcagcccctccccggagcactcctgcaagag 352
            ||| || |||||||||||||||||||||||||||||||| ||| | ||||||||||  ||
Sbjct: 2042 aaagcctttggtcatctggttgatggttatcagcccctcgccgaaacactcctgcagcag 1983

                                                                        
Query: 353  agccaagatgctagcttcattctgcttctccatcgccatcaccagcgctttcttcaccac 412
             ||||||||||| |  ||| | ||||||||||||||||| || || || ||||| |||||
Sbjct: 1982 ggccaagatgctggtgtcactatgcttctccatcgccatgactagtgccttctttaccac 1923

                                                                        
Query: 413  ttcatggttgaagaagggcatcccaaggtcacggatacactggcaggcttccttcaggtc 472
             |||||||||||||||||||||||||| |||||||| ||   |||||||||   ||||||
Sbjct: 1922 ctcatggttgaagaagggcatcccaagatcacggatgcatctgcaggcttctcccaggtc 1863

                                                                        
Query: 473  cccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagc 532
             || || |||||||| ||||| | |||||| | |||||||||||| || |||||||||||
Sbjct: 1862 accacccgtgttgtattcctccaagagcttagtgatcttgtccttggcatcttccacagc 1803

                                                         
Query: 533  ccagccagtgcccccgccccagcagcgcagtatcctctcaccaga 577
            ||| |||||||| || |||||||| |||||||| | |||||||||
Sbjct: 1802 ccatccagtgccaccaccccagcaccgcagtattcgctcaccaga 1758
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>ref|XM_472924.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1989

 Score =  323 bits (163), Expect = 4e-85
 Identities = 301/347 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 290
            ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 1931 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 1872

                                                                        
Query: 291  gcaaaaccgttggtcatctggttgatggttatcagcccctccccggagcactcctgcaag 350
            |  || ||    |||||||||||||| |||||||||||||| ||| |||||||||| |  
Sbjct: 1871 gtgaagcctaatgtcatctggttgattgttatcagcccctcaccgaagcactcctgtagc 1812

                                                                        
Query: 351  agagccaagatgctagcttcattctgcttctccatcgccatcaccagcgctttcttcacc 410
            ||||||||||| || |||||||||| ||||||||| ||||| || |||||||||||||||
Sbjct: 1811 agagccaagatccttgcttcattctccttctccattgccataacaagcgctttcttcacc 1752

                                                                        
Query: 411  acttcatggttgaagaagggcatcccaaggtcacggatacactggcaggcttccttcagg 470
            ||||||||||||||||||||||| |||||||||||||| || ||||| || |||  || |
Sbjct: 1751 acttcatggttgaagaagggcattccaaggtcacggatgcattggcaagcctcccccaag 1692

                                                                        
Query: 471  tccccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcgtcttccaca 530
            || ||||| || ||||| || ||||||||||| | |||||||||||| || ||||| |||
Sbjct: 1691 tcaccgccagtattgtattcttcaaggagctttgcgatcttgtccttcgcatcttctaca 1632

                                                           
Query: 531  gcccagccagtgcccccgccccagcagcgcagtatcctctcaccaga 577
            |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 1631 gcccagccagtgccgccaccccagcaacgcagtatcctctcaccaga 1585
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
              complete sequence
          Length = 129498

 Score =  323 bits (163), Expect = 4e-85
 Identities = 301/347 (86%)
 Strand = Plus / Plus

                                                                          
Query: 231    aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 290
              ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 106629 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 106688

                                                                          
Query: 291    gcaaaaccgttggtcatctggttgatggttatcagcccctccccggagcactcctgcaag 350
              |  || ||    |||||||||||||| |||||||||||||| ||| |||||||||| |  
Sbjct: 106689 gtgaagcctaatgtcatctggttgattgttatcagcccctcaccgaagcactcctgtagc 106748

                                                                          
Query: 351    agagccaagatgctagcttcattctgcttctccatcgccatcaccagcgctttcttcacc 410
              ||||||||||| || |||||||||| ||||||||| ||||| || |||||||||||||||
Sbjct: 106749 agagccaagatccttgcttcattctccttctccattgccataacaagcgctttcttcacc 106808

                                                                          
Query: 411    acttcatggttgaagaagggcatcccaaggtcacggatacactggcaggcttccttcagg 470
              ||||||||||||||||||||||| |||||||||||||| || ||||| || |||  || |
Sbjct: 106809 acttcatggttgaagaagggcattccaaggtcacggatgcattggcaagcctcccccaag 106868

                                                                          
Query: 471    tccccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcgtcttccaca 530
              || ||||| || ||||| || ||||||||||| | |||||||||||| || ||||| |||
Sbjct: 106869 tcaccgccagtattgtattcttcaaggagctttgcgatcttgtccttcgcatcttctaca 106928

                                                             
Query: 531    gcccagccagtgcccccgccccagcagcgcagtatcctctcaccaga 577
              |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 106929 gcccagccagtgccgccaccccagcaacgcagtatcctctcaccaga 106975
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  323 bits (163), Expect = 4e-85
 Identities = 301/347 (86%)
 Strand = Plus / Plus

                                                                            
Query: 231      aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 290
                ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 24109650 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 24109709

                                                                            
Query: 291      gcaaaaccgttggtcatctggttgatggttatcagcccctccccggagcactcctgcaag 350
                |  || ||    |||||||||||||| |||||||||||||| ||| |||||||||| |  
Sbjct: 24109710 gtgaagcctaatgtcatctggttgattgttatcagcccctcaccgaagcactcctgtagc 24109769

                                                                            
Query: 351      agagccaagatgctagcttcattctgcttctccatcgccatcaccagcgctttcttcacc 410
                ||||||||||| || |||||||||| ||||||||| ||||| || |||||||||||||||
Sbjct: 24109770 agagccaagatccttgcttcattctccttctccattgccataacaagcgctttcttcacc 24109829

                                                                            
Query: 411      acttcatggttgaagaagggcatcccaaggtcacggatacactggcaggcttccttcagg 470
                ||||||||||||||||||||||| |||||||||||||| || ||||| || |||  || |
Sbjct: 24109830 acttcatggttgaagaagggcattccaaggtcacggatgcattggcaagcctcccccaag 24109889

                                                                            
Query: 471      tccccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcgtcttccaca 530
                || ||||| || ||||| || ||||||||||| | |||||||||||| || ||||| |||
Sbjct: 24109890 tcaccgccagtattgtattcttcaaggagctttgcgatcttgtccttcgcatcttctaca 24109949

                                                               
Query: 531      gcccagccagtgcccccgccccagcagcgcagtatcctctcaccaga 577
                |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 24109950 gcccagccagtgccgccaccccagcaacgcagtatcctctcaccaga 24109996
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>dbj|AK068497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155G23, full
            insert sequence
          Length = 2486

 Score =  323 bits (163), Expect = 4e-85
 Identities = 301/347 (86%)
 Strand = Plus / Minus

                                                                        
Query: 231  aacttctcctgcgcgtttgggatgtcaagggtcagatcgtcgaggccttccttgacacga 290
            ||||||||||| || ||||||||||| ||| ||||||| ||||||||||||||||| |||
Sbjct: 2078 aacttctcctgtgcatttgggatgtcgaggatcagatcatcgaggccttccttgacgcga 2019

                                                                        
Query: 291  gcaaaaccgttggtcatctggttgatggttatcagcccctccccggagcactcctgcaag 350
            |  || ||    |||||||||||||| |||||||||||||| ||| |||||||||| |  
Sbjct: 2018 gtgaagcctaatgtcatctggttgattgttatcagcccctcaccgaagcactcctgtagc 1959

                                                                        
Query: 351  agagccaagatgctagcttcattctgcttctccatcgccatcaccagcgctttcttcacc 410
            ||||||||||| || |||||||||| ||||||||| ||||| || |||||||||||||||
Sbjct: 1958 agagccaagatccttgcttcattctccttctccattgccataacaagcgctttcttcacc 1899

                                                                        
Query: 411  acttcatggttgaagaagggcatcccaaggtcacggatacactggcaggcttccttcagg 470
            ||||||||||||||||||||||| |||||||||||||| || ||||| || |||  || |
Sbjct: 1898 acttcatggttgaagaagggcattccaaggtcacggatgcattggcaagcctcccccaag 1839

                                                                        
Query: 471  tccccgccggtgttgtactcctcaaggagcttggagatcttgtcctttgcgtcttccaca 530
            || ||||| || ||||| || ||||||||||| | |||||||||||| || ||||| |||
Sbjct: 1838 tcaccgccagtattgtattcttcaaggagctttgcgatcttgtccttcgcatcttctaca 1779

                                                           
Query: 531  gcccagccagtgcccccgccccagcagcgcagtatcctctcaccaga 577
            |||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 1778 gcccagccagtgccgccaccccagcaacgcagtatcctctcaccaga 1732
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>ref|NM_125714.2| Arabidopsis thaliana unknown protein AT5G63190 transcript variant
            AT5G63190.2 mRNA, complete cds
          Length = 2558

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
            ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 2117 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 2058

                                   
Query: 429  ggcatcccaaggtcacggataca 451
            |||||||| || || ||||||||
Sbjct: 2057 ggcatccctagatcgcggataca 2035
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>ref|NM_180924.1| Arabidopsis thaliana unknown protein AT5G63190 transcript variant
            AT5G63190.1 mRNA, complete cds
          Length = 2602

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
            ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 2161 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 2102

                                   
Query: 429  ggcatcccaaggtcacggataca 451
            |||||||| || || ||||||||
Sbjct: 2101 ggcatccctagatcgcggataca 2079
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>gb|AY142667.1| Arabidopsis thaliana putative topoisomerase (At5g63190) mRNA,
            complete cds
          Length = 2140

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
            ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 1901 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 1842

                                   
Query: 429  ggcatcccaaggtcacggataca 451
            |||||||| || || ||||||||
Sbjct: 1841 ggcatccctagatcgcggataca 1819
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>gb|AY039947.1| Arabidopsis thaliana putative topoisomerase (At5g63190) mRNA,
            complete cds
          Length = 2493

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
            ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 2154 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 2095

                                   
Query: 429  ggcatcccaaggtcacggataca 451
            |||||||| || || ||||||||
Sbjct: 2094 ggcatccctagatcgcggataca 2072
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>gb|AY085894.1| Arabidopsis thaliana clone 19433 mRNA, complete sequence
          Length = 2551

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
            ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 2162 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 2103

                                   
Query: 429  ggcatcccaaggtcacggataca 451
            |||||||| || || ||||||||
Sbjct: 2102 ggcatccctagatcgcggataca 2080
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>gb|DQ108755.1| Arabidopsis thaliana clone 17022 mRNA sequence
          Length = 1538

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                       
Query: 369 tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
           ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 32  tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 91

                                  
Query: 429 ggcatcccaaggtcacggataca 451
           |||||||| || || ||||||||
Sbjct: 92  ggcatccctagatcgcggataca 114
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>dbj|AB008265.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MDC12
          Length = 81662

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 369   tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
             ||||||||||||||||| ||||||||||  ||||||||||| ||||| |||||||| || 
Sbjct: 56990 tcattctgcttctccattgccatcaccaaagctttcttcactacttcgtggttgaaaaaa 56931

                                    
Query: 429   ggcatcccaaggtcacggataca 451
             |||||||| || || ||||||||
Sbjct: 56930 ggcatccctagatcgcggataca 56908
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>ref|NM_118613.1| Arabidopsis thaliana unknown protein AT4G24800 transcript variant
            AT4G24800.1 mRNA, complete cds
          Length = 2640

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 372  ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
            |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 2116 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 2057

              
Query: 432  at 433
            ||
Sbjct: 2056 at 2055



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 489  tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
            ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 1999 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 1953
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>ref|NM_001036631.1| Arabidopsis thaliana unknown protein AT4G24800 transcript variant
            AT4G24800.2 mRNA, complete cds
          Length = 2728

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 372  ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
            |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 2204 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 2145

              
Query: 432  at 433
            ||
Sbjct: 2144 at 2143



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 489  tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
            ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 2087 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 2041
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>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62
          Length = 197070

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 372   ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
             |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 58979 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 58920

               
Query: 432   at 433
             ||
Sbjct: 58919 at 58918



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 489   tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
             ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 58862 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 58816
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>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone  F6I7 (ESSA project)
          Length = 95185

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                         
Query: 372   ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
             |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 29555 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 29496

               
Query: 432   at 433
             ||
Sbjct: 29495 at 29494



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 489   tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
             ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 29438 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 29392
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>gb|AY124878.1| Arabidopsis thaliana AT4g24800/F6I7_10 mRNA, complete cds
          Length = 2109

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 372  ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
            |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 1880 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 1821

              
Query: 432  at 433
            ||
Sbjct: 1820 at 1819



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 489  tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
            ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 1763 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 1717
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>gb|AY062102.1| Arabidopsis thaliana AT4g24800/F6I7_10 mRNA, complete cds
          Length = 2641

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 372  ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
            |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 2117 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 2058

              
Query: 432  at 433
            ||
Sbjct: 2057 at 2056



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 489  tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
            ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 2000 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 1954
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>dbj|AK221703.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
            clone: RAFL15-48-P09
          Length = 2539

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 56/62 (90%)
 Strand = Plus / Minus

                                                                        
Query: 372  ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
            |||| |||||||||  |||||||||| |||||||||||||| |||||||||||||| |||
Sbjct: 2054 ttcttcttctccatacccatcaccagtgctttcttcaccacctcatggttgaagaaaggc 1995

              
Query: 432  at 433
            ||
Sbjct: 1994 at 1993



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 489  tcctcaaggagcttggagatcttgtcctttgcgtcttccacagccca 535
            ||||| ||||| || || |||||||||||||| |||||||| |||||
Sbjct: 1937 tcctccaggagatttgatatcttgtcctttgcatcttccactgccca 1891
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>gb|BT018954.1| Zea mays clone Contig146.F mRNA sequence
          Length = 1057

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Minus

                                                                       
Query: 369 tcattctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaag 428
           ||||||| ||||||||| |||||||| ||||| ||||| || ||||||||||||||||| 
Sbjct: 565 tcattcttcttctccattgccatcacgagcgccttcttgacaacttcatggttgaagaaa 506

                               
Query: 429 ggcatcccaaggtcacggat 448
           | ||| || || ||||||||
Sbjct: 505 gacatacccagctcacggat 486



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 486 tactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgccc 545
           |||||||| |||||||| |  ||||||||||| || || ||||||||||| || || || 
Sbjct: 448 tactcctccaggagctttgttatcttgtccttggcatcctccacagcccatccggttcca 389

                                                    
Query: 546 ccgccccagcagcgcagtatcctctcaccagaatgacgggc 586
           ||||||||||| | ||| | ||||||||| | |||||||||
Sbjct: 388 ccgccccagcacctcagaagcctctcaccggcatgacgggc 348



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 300 ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
           ||||||||||||||||||||||| | ||| || ||  ||||||||||||
Sbjct: 631 ttggtcatctggttgatggttatgatcccttcaccaaagcactcctgca 583
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>gb|AY104255.1| Zea mays PCO124332 mRNA sequence
          Length = 1019

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 372 ttctgcttctccatcgccatcaccagcgctttcttcaccacttcatggttgaagaagggc 431
           |||| ||||||||| |||||||| ||||| ||||| || ||||||||||||||||| | |
Sbjct: 528 ttcttcttctccattgccatcacgagcgccttcttgacaacttcatggttgaagaaagac 469

                            
Query: 432 atcccaaggtcacggat 448
           || || || ||||||||
Sbjct: 468 atacccagctcacggat 452



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                       
Query: 486 tactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgccc 545
           |||||||| |||||||| |  ||||||||||| || || ||||||||||| || || || 
Sbjct: 414 tactcctccaggagctttgttatcttgtccttggcatcctccacagcccatccggttcca 355

                                                    
Query: 546 ccgccccagcagcgcagtatcctctcaccagaatgacgggc 586
           ||||||||||| | ||| | ||||||||| | |||||||||
Sbjct: 354 ccgccccagcacctcagaagcctctcaccggcatgacgggc 314



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 300 ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
           ||||||||||||||||||||||| | ||| || ||  ||||||||||||
Sbjct: 597 ttggtcatctggttgatggttatgatcccttcaccaaagcactcctgca 549
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>ref|NM_114699.3| Arabidopsis thaliana unknown protein AT3G48390 mRNA, complete cds
          Length = 2304

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 505  agatcttgtcctttgcgtcttccacagcccagccagtgcccccgccccagc 555
            |||||||||| || ||||||||||| |||||||| || ||||| |||||||
Sbjct: 1734 agatcttgtctttagcgtcttccactgcccagcccgttcccccaccccagc 1684
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>emb|AL049659.2|ATT29H11 Arabidopsis thaliana DNA chromosome 3, BAC clone T29H11
          Length = 97488

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 505   agatcttgtcctttgcgtcttccacagcccagccagtgcccccgccccagc 555
             |||||||||| || ||||||||||| |||||||| || ||||| |||||||
Sbjct: 55558 agatcttgtctttagcgtcttccactgcccagcccgttcccccaccccagc 55508
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>gb|AY074567.1| Arabidopsis thaliana AT3g48390/T29H11_90 mRNA, complete cds
          Length = 2183

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 505  agatcttgtcctttgcgtcttccacagcccagccagtgcccccgccccagc 555
            |||||||||| || ||||||||||| |||||||| || ||||| |||||||
Sbjct: 1715 agatcttgtctttagcgtcttccactgcccagcccgttcccccaccccagc 1665
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>gb|BT002208.1| Arabidopsis thaliana At3g48390/T29H11_90 mRNA, complete cds
          Length = 1902

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 505  agatcttgtcctttgcgtcttccacagcccagccagtgcccccgccccagc 555
            |||||||||| || ||||||||||| |||||||| || ||||| |||||||
Sbjct: 1558 agatcttgtctttagcgtcttccactgcccagcccgttcccccaccccagc 1508
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>ref|NM_187687.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1908

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 392  caccagcgctttcttcaccacttcatggttgaagaagggcatccc 436
            ||||||||| ||||||||||| || |||| |||||| ||||||||
Sbjct: 1671 caccagcgccttcttcaccacctcgtggtggaagaatggcatccc 1627
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 392     caccagcgctttcttcaccacttcatggttgaagaagggcatccc 436
               ||||||||| ||||||||||| || |||| |||||| ||||||||
Sbjct: 6361706 caccagcgccttcttcaccacctcgtggtggaagaatggcatccc 6361750
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>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 392   caccagcgctttcttcaccacttcatggttgaagaagggcatccc 436
             ||||||||| ||||||||||| || |||| |||||| ||||||||
Sbjct: 41832 caccagcgccttcttcaccacctcgtggtggaagaatggcatccc 41876
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 392     caccagcgctttcttcaccacttcatggttgaagaagggcatccc 436
               ||||||||| ||||||||||| || |||| |||||| ||||||||
Sbjct: 6360919 caccagcgccttcttcaccacctcgtggtggaagaatggcatccc 6360963
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>dbj|AK070688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057E15, full
            insert sequence
          Length = 2588

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 392  caccagcgctttcttcaccacttcatggttgaagaagggcatccc 436
            ||||||||| ||||||||||| || |||| |||||| ||||||||
Sbjct: 1974 caccagcgccttcttcaccacctcgtggtggaagaatggcatccc 1930
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>ref|XM_479828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2362

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
            ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 2007 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 1948

                        
Query: 545  cccgccccagca 556
             |||||||||||
Sbjct: 1947 accgccccagca 1936



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 300  ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
            |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 2189 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 2141
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                           
Query: 485     gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
               ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 1116118 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 1116177

                           
Query: 545     cccgccccagca 556
                |||||||||||
Sbjct: 1116178 accgccccagca 1116189



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                                
Query: 300     ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
               |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 1115936 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 1115984
to top
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1203H11
          Length = 156561

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                         
Query: 485   gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
             ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 29355 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 29414

                         
Query: 545   cccgccccagca 556
              |||||||||||
Sbjct: 29415 accgccccagca 29426



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 300   ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
             |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 29173 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 29221
to top
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1005_B05
          Length = 144799

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Plus

                                                                          
Query: 485    gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
              ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 144645 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 144704

                          
Query: 545    cccgccccagca 556
               |||||||||||
Sbjct: 144705 accgccccagca 144716



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                               
Query: 300    ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
              |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 144463 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 144511
to top
>dbj|AK104476.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F02, full
           insert sequence
          Length = 995

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                       
Query: 485 gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
           ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 304 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 245

                       
Query: 545 cccgccccagca 556
            |||||||||||
Sbjct: 244 accgccccagca 233



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 300 ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
           |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 486 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 438
to top
>dbj|AK102447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093O03, full
            insert sequence
          Length = 2790

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
            ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 2007 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 1948

                        
Query: 545  cccgccccagca 556
             |||||||||||
Sbjct: 1947 accgccccagca 1936



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 300  ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
            |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 2189 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 2141
to top
>dbj|AK067413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100H24, full
            insert sequence
          Length = 2320

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 485  gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
            ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 1624 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 1565

                        
Query: 545  cccgccccagca 556
             |||||||||||
Sbjct: 1564 accgccccagca 1553



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 300  ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
            |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 1806 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 1758
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>dbj|AK060858.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F06, full
           insert sequence
          Length = 995

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                       
Query: 485 gtactcctcaaggagcttggagatcttgtcctttgcgtcttccacagcccagccagtgcc 544
           ||||||||| || ||||| |  ||||||||||||| ||| |||||| |||| || || ||
Sbjct: 304 gtactcctccagaagctttgctatcttgtcctttgtgtcctccacaacccatcctgtccc 245

                       
Query: 545 cccgccccagca 556
            |||||||||||
Sbjct: 244 accgccccagca 233



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 300 ttggtcatctggttgatggttatcagcccctccccggagcactcctgca 348
           |||||||||||||||||||| || | ||| || ||  ||||||||||||
Sbjct: 486 ttggtcatctggttgatggtgatgatcccttcaccaaagcactcctgca 438
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>gb|BC070577.1| Xenopus laevis hypothetical protein MGC81066, mRNA (cDNA clone
           MGC:81066 IMAGE:6316522), complete cds
          Length = 3608

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 131 ttcttcaagcttagccgtctgt 152
           ||||||||||||||||||||||
Sbjct: 796 ttcttcaagcttagccgtctgt 817
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>emb|AL928651.13| Mouse DNA sequence from clone RP23-167A19 on chromosome 4 Contains a
             3-hydroxyisobutyrate dehydrogenase, mitochondrial
             precursor (Hibadh) pseudogene and a CpG island, complete
             sequence
          Length = 157883

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 50    cagaaaagactaggaacagaagaaa 74
             ||||| |||||||||||||||||||
Sbjct: 40882 cagaacagactaggaacagaagaaa 40906
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 540     gtgcccccgccccagcagcgc 560
               |||||||||||||||||||||
Sbjct: 1925886 gtgcccccgccccagcagcgc 1925866
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>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier,
             hypothetical protein, putative NAM protein, putative
             cis-zeatin O-glucosyltransferases, putative small nuclear
             ribonucleoprotein, putative cis-zeatin
             O-glucosyltransferase, putative glutathione peroxidase,
             putative copper-exporting ATPases, putative
             serine/threonine dehydratase, and putative actin
             depolymerizing factor genes, complete cds; and
             hypothetical protein gene, partial cds
          Length = 157237

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 459   gcttccttcaggtccccgccg 479
             |||||||||||||||||||||
Sbjct: 53687 gcttccttcaggtccccgccg 53707
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>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
             complete sequence
          Length = 95383

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 414   tcatggttgaagaagggcat 433
             ||||||||||||||||||||
Sbjct: 81267 tcatggttgaagaagggcat 81248
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>ref|XM_587457.2| PREDICTED: Bos taurus similar to putative secretory pathway
           Ca-ATPase SPCA2 (LOC510329), mRNA
          Length = 3147

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 gggaagagctcagggcaggg 174
           ||||||||||||||||||||
Sbjct: 53  gggaagagctcagggcaggg 34
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>gb|AC146277.2| Pan troglodytes BAC clone CH251-17J20 from X, complete sequence
          Length = 160219

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 154    ggggaagagctcagggcagggagg 177
              |||||||||||| |||||||||||
Sbjct: 139225 ggggaagagctctgggcagggagg 139202
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>gb|AC146276.2| Pan troglodytes BAC clone CH251-149B14 from X, complete sequence
          Length = 180335

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   ggggaagagctcagggcagggagg 177
             |||||||||||| |||||||||||
Sbjct: 58910 ggggaagagctctgggcagggagg 58933
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>gb|AC144386.2| Pan troglodytes BAC clone CH251-313C12 from X, complete sequence
          Length = 202661

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    ggggaagagctcagggcagggagg 177
              |||||||||||| |||||||||||
Sbjct: 153665 ggggaagagctctgggcagggagg 153688
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>gb|AC155711.14| Mus musculus 10 BAC RP24-189K8 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 183897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 377  cttctccatcgccatcacca 396
            ||||||||||||||||||||
Sbjct: 4993 cttctccatcgccatcacca 5012
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>gb|BC062441.1| Homo sapiens cDNA clone IMAGE:6621304, partial cds
          Length = 706

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 154 ggggaagagctcagggcagggagg 177
           |||||||||||| |||||||||||
Sbjct: 351 ggggaagagctctgggcagggagg 328
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>emb|CR547121.11| Zebrafish DNA sequence from clone DKEY-118G10 in linkage group 8,
             complete sequence
          Length = 76347

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   ctccccggagcactcctgca 348
             ||||||||||||||||||||
Sbjct: 42271 ctccccggagcactcctgca 42252
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>emb|Z70226.1|HSV1077H7 Human DNA sequence from clone GHc-1077H7 on chromosome X Contains part
             of the NXF2 gene for nuclear RNA export factor 2 and a
             preferentially expressed antigen in melanoma (PRAME)
             pseudogene, complete sequence
          Length = 32374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   ggggaagagctcagggcagggagg 177
             |||||||||||| |||||||||||
Sbjct: 28009 ggggaagagctctgggcagggagg 27986
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>emb|AL590396.13| Human DNA sequence from clone RP11-193H5 on chromosome 1 Contains the
             3' end of a novel gene (LOC401987), a actin pseudogene, a
             cytochrome b (MTCYB) pseudogene, a NADH dehydrogenase 6
             (MTND6) pseudogene and a NADH dehydrogenase 5 (MTND5)
             pseudogene, complete sequence
          Length = 122108

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aggaacagaagaaaaagaag 80
             ||||||||||||||||||||
Sbjct: 67746 aggaacagaagaaaaagaag 67765
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>emb|AL590069.5| Human DNA sequence from clone RP11-353J17 on chromosome X, complete
             sequence
          Length = 158828

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 154   ggggaagagctcagggcagggagg 177
             |||||||||||| |||||||||||
Sbjct: 95158 ggggaagagctctgggcagggagg 95181
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>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 484    tgtactcctcaaggagcttggaga 507
              |||||||||||||||||| |||||
Sbjct: 346913 tgtactcctcaaggagctgggaga 346936
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>gb|AC153517.8| Mus musculus 10 BAC RP23-22E18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 203981

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 377    cttctccatcgccatcacca 396
              ||||||||||||||||||||
Sbjct: 109026 cttctccatcgccatcacca 109007
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>gb|AC092793.5| Homo sapiens 12p BAC RP11-74N9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 76000

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    aggaacagaagaaaaagaag 80
             ||||||||||||||||||||
Sbjct: 73254 aggaacagaagaaaaagaag 73273
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>gb|AC097504.3| Homo sapiens BAC clone RP11-362F19 from 4, complete sequence
          Length = 186215

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 326    cccctccccggagcactcctgcaa 349
              ||||||||| ||||||||||||||
Sbjct: 115510 cccctccccagagcactcctgcaa 115487
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>emb|AL953914.11| Zebrafish DNA sequence from clone CH211-235I18 in linkage group 8,
             complete sequence
          Length = 151737

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   ctccccggagcactcctgca 348
             ||||||||||||||||||||
Sbjct: 83889 ctccccggagcactcctgca 83908
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 379     tctccatcgccatcaccagc 398
               ||||||||||||||||||||
Sbjct: 4370517 tctccatcgccatcaccagc 4370498
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     tcatggttgaagaagggcat 433
               ||||||||||||||||||||
Sbjct: 8502997 tcatggttgaagaagggcat 8502978
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>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1279D09
          Length = 134793

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 379   tctccatcgccatcaccagc 398
             ||||||||||||||||||||
Sbjct: 73335 tctccatcgccatcaccagc 73316
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>gb|AY141876.1| Triticum aestivum cultivar TAM104R gag polyprotein mRNA, complete
           cds; and unknown mRNAs
          Length = 1290

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 401 tttcttcaccacttcatggt 420
           ||||||||||||||||||||
Sbjct: 92  tttcttcaccacttcatggt 73
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>dbj|AP000344.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1269D1
          Length = 186421

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 533   ccagccagtgcccccgccccagcagcgc 560
             |||||||||||||||||| |||| ||||
Sbjct: 65084 ccagccagtgcccccgccgcagccgcgc 65111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,573,550
Number of Sequences: 3902068
Number of extensions: 5573550
Number of successful extensions: 114283
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113806
Number of HSP's gapped (non-prelim): 476
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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