>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor|
            (Fibrocystin) (Polyductin) (Tigmin)
          Length = 4074

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 189  TDVPRLCNVNVKCRERKFFSFPFFLLPGESHGC 91
            TD+P   ++ ++C  R   SFPF   PG++ GC
Sbjct: 2656 TDLPPYPDILLRCGSRVGLSFPFLPSPGQNQGC 2688

>YJP2_YEAST (P47003) Hypothetical 13.7 kDa protein in INO1-IDS2 intergenic|
           region
          Length = 119

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/51 (31%), Positives = 21/51 (41%)
 Frame = +2

Query: 17  HRAXKHIQMHKREIPAQTTKHLHYVHPCDSPGRRKKGKEKNFLSLHFTFTL 169
           H    HI      IP  T +H H  H  D   +R + K  N L + F  T+
Sbjct: 9   HTWPPHISHSTLSIPHPTPEHRHVFHKKDVKNKRNEEKGNNLLYVLFRTTV 59

>POL2_BRAV (Q9YK98) RNA2 polyprotein (P2) [Contains: P2A protein; Movement|
           protein (MP); Coat protein (CP)]
          Length = 1626

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 113 RRKKGKEKNFLSLHFTFTLQRRGTSVEPEPAXSVCGWRPFFXA 241
           +RKK K+K F S    F  +R+     P P   V  W  +  A
Sbjct: 594 KRKKNKKKEFHSFSACFAFKRKQIQWPPTPNEMVNEWEEYCIA 636

>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated|
           protein 10.12) (High sulfur keratin-associated protein
           10.12) (Keratin-associated protein 18-12)
           (Keratin-associated protein 18.12)
          Length = 245

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 78  CLVVCAGISLLCI*MCXXARCVPSC 4
           C+ VC+G S LC   C  + C P+C
Sbjct: 162 CVPVCSGASSLC---CQQSSCQPAC 183

>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 78  CLVVCAGISLLCI*MCXXARCVPSC 4
           C+ VC+G S LC   C  + C P+C
Sbjct: 176 CVPVCSGASSLC---CQKSSCQPAC 197

>KORB2_ECOLI (P07674) Transcriptional repressor protein korB|
          Length = 358

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 249 RWFAXKKGRQPHTLXAGSGSTDVPR 175
           R F  +KGR P+T+ A +G TD  R
Sbjct: 247 REFLDEKGRDPNTVDAFNGQTDAER 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,325,826
Number of Sequences: 219361
Number of extensions: 804590
Number of successful extensions: 2185
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2185
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)