ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20m07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475382.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2511 Score = 137 bits (69), Expect = 6e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 489 aagtcgttaactgcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatg 548 ||||| |||||||||||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 2495 aagtcattaactgcaagtgaggcatcaccatgtgcgacggcattctctggctctggcatg 2436 Query: 549 aaaagcatactagaagaagcctttgtgtctatctgcaattctccactgttatctactgaa 608 |||| || ||| ||||||||| ||||||| ||||| |||| ||||| |||| |||| Sbjct: 2435 taaagtgtagtagtagaagccttcgtgtctaattgcaagtctctgctgttgtctattgaa 2376 Query: 609 agaacagcaccatgtgcttttaaccatatttcacattcttc 649 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 2375 agaatagcaccatgagcttttaaccacatttcacactcttc 2335
>dbj|AK065879.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049D22, full insert sequence Length = 1553 Score = 137 bits (69), Expect = 6e-29 Identities = 138/161 (85%) Strand = Plus / Minus Query: 489 aagtcgttaactgcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatg 548 ||||| |||||||||||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 1475 aagtcattaactgcaagtgaggcatcaccatgtgcgacggcattctctggctctggcatg 1416 Query: 549 aaaagcatactagaagaagcctttgtgtctatctgcaattctccactgttatctactgaa 608 |||| || ||| ||||||||| ||||||| ||||| |||| ||||| |||| |||| Sbjct: 1415 taaagtgtagtagtagaagccttcgtgtctaattgcaagtctctgctgttgtctattgaa 1356 Query: 609 agaacagcaccatgtgcttttaaccatatttcacattcttc 649 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1355 agaatagcaccatgagcttttaaccacatttcacactcttc 1315
>ref|NM_190488.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2724 Score = 133 bits (67), Expect = 9e-28 Identities = 132/153 (86%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 501 gcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatgaaaagcatacta 560 |||||||| ||||| ||||||| ||| ||||| || || ||||||||| | || | || Sbjct: 2693 gcaagtgatgcatcaccatgtgaaacagcattatcaggttccggcatgtatagggaagta 2634 Query: 561 gaagaagcctttgtgtctatctgcaattctcc---actgttatctactgaaagaacagca 617 |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 2633 gaagaaacctttgtgtctatctgcaattctccgttattgttatctactgaaagaacagca 2574 Query: 618 ccatgtgcttttaaccatatttcacattcttcc 650 ||||| |||||||||||| ||||||||||||| Sbjct: 2573 ccatgcgcttttaaccattcttcacattcttcc 2541
>dbj|AK073540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042J20, full insert sequence Length = 3991 Score = 133 bits (67), Expect = 9e-28 Identities = 132/153 (86%), Gaps = 3/153 (1%) Strand = Plus / Minus Query: 501 gcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatgaaaagcatacta 560 |||||||| ||||| ||||||| ||| ||||| || || ||||||||| | || | || Sbjct: 3441 gcaagtgatgcatcaccatgtgaaacagcattatcaggttccggcatgtatagggaagta 3382 Query: 561 gaagaagcctttgtgtctatctgcaattctcc---actgttatctactgaaagaacagca 617 |||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 3381 gaagaaacctttgtgtctatctgcaattctccgttattgttatctactgaaagaacagca 3322 Query: 618 ccatgtgcttttaaccatatttcacattcttcc 650 ||||| |||||||||||| ||||||||||||| Sbjct: 3321 ccatgcgcttttaaccattcttcacattcttcc 3289
>dbj|AK068785.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159K24, full insert sequence Length = 3076 Score = 129 bits (65), Expect = 1e-26 Identities = 137/161 (85%) Strand = Plus / Minus Query: 489 aagtcgttaactgcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatg 548 ||||| ||||||| |||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 2998 aagtcattaactgaaagtgaggcatcaccatgtgcgacggcattctctggctctggcatg 2939 Query: 549 aaaagcatactagaagaagcctttgtgtctatctgcaattctccactgttatctactgaa 608 |||| || ||| ||||||||| ||||||| ||||| |||| ||||| |||| |||| Sbjct: 2938 taaagtgtagtagtagaagccttcgtgtctaattgcaagtctctgctgttgtctattgaa 2879 Query: 609 agaacagcaccatgtgcttttaaccatatttcacattcttc 649 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 2878 agaatagcaccatgagcttttaaccacatttcacactcttc 2838
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 79/86 (91%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 568 cctttgtgtctatctgcaattctcc---actgttatctactgaaagaacagcaccatgtg 624 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 35847525 cctttgtgtctatctgcaattctccgttattgttatctactgaaagaacagcaccatgcg 35847466 Query: 625 cttttaaccatatttcacattcttcc 650 ||||||||||| ||||||||||||| Sbjct: 35847465 cttttaaccattcttcacattcttcc 35847440
>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506B12 Length = 170759 Score = 111 bits (56), Expect = 3e-21 Identities = 79/86 (91%), Gaps = 3/86 (3%) Strand = Plus / Minus Query: 568 cctttgtgtctatctgcaattctcc---actgttatctactgaaagaacagcaccatgtg 624 ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 111983 cctttgtgtctatctgcaattctccgttattgttatctactgaaagaacagcaccatgcg 111924 Query: 625 cttttaaccatatttcacattcttcc 650 ||||||||||| ||||||||||||| Sbjct: 111923 cttttaaccattcttcacattcttcc 111898
>gb|AC108876.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1525_A02, complete sequence Length = 93826 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 489 aagtcgttaactgcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatg 548 ||||| |||||||||||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 75958 aagtcattaactgcaagtgaggcatcaccatgtgcgacggcattctctggctctggcatg 76017 Query: 549 aaaagcatactagaagaagcct 570 |||| || ||| |||||||| Sbjct: 76018 taaagtgtagtagtagaagcct 76039 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 568 cctttgtgtctatctgcaattctccactgttatctactgaaagaacagcaccatgtgctt 627 |||| ||||||| ||||| |||| ||||| |||| |||||||| ||||||||| |||| Sbjct: 76752 ccttcgtgtctaattgcaagtctctgctgttgtctattgaaagaatagcaccatgagctt 76811 Query: 628 ttaaccatatttcacattcttc 649 ||||||| |||||||| ||||| Sbjct: 76812 ttaaccacatttcacactcttc 76833
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 75.8 bits (38), Expect = 2e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 489 aagtcgttaactgcaagtgacgcatcgccatgtgcaaccgcattctctggctccggcatg 548 ||||| |||||||||||||| ||||| |||||||| || |||||||||||||| |||||| Sbjct: 22580908 aagtcattaactgcaagtgaggcatcaccatgtgcgacggcattctctggctctggcatg 22580967 Query: 549 aaaagcatactagaagaagcct 570 |||| || ||| |||||||| Sbjct: 22580968 taaagtgtagtagtagaagcct 22580989 Score = 67.9 bits (34), Expect = 4e-08 Identities = 70/82 (85%) Strand = Plus / Plus Query: 568 cctttgtgtctatctgcaattctccactgttatctactgaaagaacagcaccatgtgctt 627 |||| ||||||| ||||| |||| ||||| |||| |||||||| ||||||||| |||| Sbjct: 22581702 ccttcgtgtctaattgcaagtctctgctgttgtctattgaaagaatagcaccatgagctt 22581761 Query: 628 ttaaccatatttcacattcttc 649 ||||||| |||||||| ||||| Sbjct: 22581762 ttaaccacatttcacactcttc 22581783
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 358 caagtatttaggtacagagggagta 382 ||||||||||||||||||||||||| Sbjct: 2373 caagtatttaggtacagagggagta 2349
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 173249 aatcccaaaaacctgtgcaacat 173227
>ref|XM_974163.1| PREDICTED: Mus musculus similar to Sphingosine-1-phosphate phosphatase 2 (Sphingosine-1-phosphatase 2) (SPPase2) (Spp2) (LOC669276), mRNA Length = 1136 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 1129 aatcccaaaaacctgtgcaacat 1107
>ref|XM_359376.5| PREDICTED: Mus musculus sphingosine-1-phosphate phosphotase 2 (Sgpp2), mRNA Length = 660 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 653 aatcccaaaaacctgtgcaacat 631
>ref|XM_986893.1| PREDICTED: Mus musculus similar to Sphingosine-1-phosphate phosphatase 2 (Sphingosine-1-phosphatase 2) (SPPase2) (Spp2) (LOC676038), mRNA Length = 570 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 563 aatcccaaaaacctgtgcaacat 541
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Minus Query: 353 aactacaagtatttaggtacagaggga 379 ||||||||||||||| ||||||||||| Sbjct: 14688 aactacaagtatttaagtacagaggga 14662
>ref|NM_001004173.1| Mus musculus sphingosine-1-phosphate phosphotase 2 (Sgpp2), mRNA Length = 4030 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 1132 aatcccaaaaacctgtgcaacat 1110
>gb|AC079223.11| Mus musculus chromosome 1, clone RP22-318M10, complete sequence Length = 137729 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 3438 aatcccaaaaacctgtgcaacat 3416
>dbj|AK081023.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930069J17 product:unclassifiable, full insert sequence Length = 3855 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 987 aatcccaaaaacctgtgcaacat 965
>gb|BC049995.1| Mus musculus sphingosine-1-phosphate phosphotase 2, mRNA (cDNA clone MGC:59240 IMAGE:6399201), complete cds Length = 4030 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 1132 aatcccaaaaacctgtgcaacat 1110
>ref|XM_237343.3| PREDICTED: Rattus norvegicus similar to Sphingosine-1-phosphate phosphotase 2 (LOC301543), mRNA Length = 1779 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 1772 aatcccaaaaacctgtgcaacat 1750
>gb|AC158559.7| Mus musculus chromosome 1, clone RP24-300L5, complete sequence Length = 169324 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 675 aatcccaaaaacctgtgcaacat 697 ||||||||||||||||||||||| Sbjct: 24523 aatcccaaaaacctgtgcaacat 24501
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 tatttaggtacagagggagtaa 383 |||||||||||||||||||||| Sbjct: 8697 tatttaggtacagagggagtaa 8718
>gb|AC154346.3| Mus musculus BAC clone RP24-503E4 from chromosome 17, complete sequence Length = 167603 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 ctccaactttccagccccacag 272 |||||||||||||||||||||| Sbjct: 19663 ctccaactttccagccccacag 19684
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 362 tatttaggtacagagggagtaa 383 |||||||||||||||||||||| Sbjct: 17305 tatttaggtacagagggagtaa 17326
>emb|AJ300144.1|HVU300144 Hordeum vulgare srg6 gene for stress responsive gene protein 6, exons 1-11, cultivar Morex Length = 4197 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 357 acaagtatttaggtacagagggagta 382 ||||||||||||| |||||||||||| Sbjct: 1506 acaagtatttaggaacagagggagta 1481
>emb|BX571959.8| Zebrafish DNA sequence from clone DKEY-46I6 in linkage group 12, complete sequence Length = 116374 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 ctacaagtatttaggtacaga 375 ||||||||||||||||||||| Sbjct: 8036 ctacaagtatttaggtacaga 8016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tatttaggtacagagggagta 382 ||||||||||||||||||||| Sbjct: 11641248 tatttaggtacagagggagta 11641228
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 atttaggtacagagggagtaa 383 ||||||||||||||||||||| Sbjct: 2803518 atttaggtacagagggagtaa 2803498
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tatttaggtacagagggagta 382 ||||||||||||||||||||| Sbjct: 9465159 tatttaggtacagagggagta 9465139
>dbj|AP003538.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0059O19 Length = 144386 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tatttaggtacagagggagta 382 ||||||||||||||||||||| Sbjct: 52781 tatttaggtacagagggagta 52761
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 363 atttaggtacagagggagtaa 383 ||||||||||||||||||||| Sbjct: 107079 atttaggtacagagggagtaa 107059
>emb|AL663008.3|OSJN00209 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0058J09, complete sequence Length = 164911 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 tatttaggtacagagggagta 382 ||||||||||||||||||||| Sbjct: 124258 tatttaggtacagagggagta 124238
>gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gene, partial cds; cfos gene, complete cds; and unknown gene Length = 202267 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 actgcagccgtccagtgcacaggc 222 ||||||||||||||||||| |||| Sbjct: 199951 actgcagccgtccagtgcagaggc 199974
>gb|AC125081.3| Mus musculus BAC clone RP24-89D17 from chromosome 3, complete sequence Length = 220895 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ccaactttccagccccacag 272 |||||||||||||||||||| Sbjct: 121121 ccaactttccagccccacag 121102
>gb|AC098706.3| Mus musculus BAC clone RP23-1I11 from 14, complete sequence Length = 234326 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 ccaactttccagccccacag 272 |||||||||||||||||||| Sbjct: 228351 ccaactttccagccccacag 228370
>emb|AL136181.13| Human DNA sequence from clone RP11-35J23 on chromosome 10 Contains two novel genes, the DNTT gene for terminal deoxynucleotidyltransferase (TDT), the TMEM10 gene for transmembrane protein 10 (TMP10, HTMP10) and the 3' end of the TLL2 gene for tolloid-like 2, complete sequence Length = 146909 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tgagctgatccatttcatgt 300 |||||||||||||||||||| Sbjct: 131260 tgagctgatccatttcatgt 131241
>emb|X60196.1|DMMHCG D.melanogaster partial Mhc gene for myosin heavy chain Length = 2760 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agccccacagatgcatcttg 282 |||||||||||||||||||| Sbjct: 2432 agccccacagatgcatcttg 2451
>emb|BX510998.12| Zebrafish DNA sequence from clone CH211-272L18 in linkage group 12, complete sequence Length = 148753 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aatgaaatatgcggtttcta 83 |||||||||||||||||||| Sbjct: 48318 aatgaaatatgcggtttcta 48337
>gb|BC043425.2| Homo sapiens cDNA clone IMAGE:5288497 Length = 3492 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ctactgaaagaacagcacca 620 |||||||||||||||||||| Sbjct: 1511 ctactgaaagaacagcacca 1530
>gb|BC042000.1| Homo sapiens cDNA clone IMAGE:5310959 Length = 2326 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ctactgaaagaacagcacca 620 |||||||||||||||||||| Sbjct: 345 ctactgaaagaacagcacca 364
>emb|BX296565.8| Zebrafish DNA sequence from clone CH211-269E2 in linkage group 9, complete sequence Length = 61072 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 tacaagtatttaggtacaga 375 |||||||||||||||||||| Sbjct: 6478 tacaagtatttaggtacaga 6497
>gb|AC107958.3| Homo sapiens chromosome 15, clone RP11-692C24, complete sequence Length = 188297 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tacaaagaaatgaaatatgc 75 |||||||||||||||||||| Sbjct: 38748 tacaaagaaatgaaatatgc 38767
>gb|AC107946.4| Homo sapiens chromosome 15, clone RP11-68C15, complete sequence Length = 147885 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tacaaagaaatgaaatatgc 75 |||||||||||||||||||| Sbjct: 47603 tacaaagaaatgaaatatgc 47622
>gb|AC104034.6| Homo sapiens chromosome 15, clone RP11-627K17, complete sequence Length = 162607 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 tacaaagaaatgaaatatgc 75 |||||||||||||||||||| Sbjct: 44617 tacaaagaaatgaaatatgc 44636
>gb|AC169370.4| Sorghum bicolor clone SB_BBc0011I20, complete sequence Length = 135209 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 atttaggtacagagggagta 382 |||||||||||||||||||| Sbjct: 43500 atttaggtacagagggagta 43481
>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone BACR26O03, complete sequence Length = 175413 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agccccacagatgcatcttg 282 |||||||||||||||||||| Sbjct: 149878 agccccacagatgcatcttg 149897
>gb|AC008575.7| Homo sapiens chromosome 5 clone CTC-554D6, complete sequence Length = 168285 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 614 agcaccatgtgcttttaacc 633 |||||||||||||||||||| Sbjct: 110545 agcaccatgtgcttttaacc 110564
>gb|AC154724.2| Mus musculus BAC clone RP23-125I9 from chromosome 14, complete sequence Length = 177085 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ccaactttccagccccacag 272 |||||||||||||||||||| Sbjct: 64789 ccaactttccagccccacag 64770
>gb|AC020571.9| Homo sapiens BAC clone RP11-387H5 from 2, complete sequence Length = 165106 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 ggcatgaaaagcatactaga 562 |||||||||||||||||||| Sbjct: 2550 ggcatgaaaagcatactaga 2569
>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence Length = 202029 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 584 caattctccactgttatctactga 607 ||||||||||||||| |||||||| Sbjct: 162568 caattctccactgttttctactga 162591
>gb|AC009363.4|AC009363 Homo sapiens chromosome 14 clone CTD-2317F5 map 14q24.3, complete sequence Length = 82707 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 199 actgcagccgtccagtgcacaggc 222 ||||||||||||||||||| |||| Sbjct: 11615 actgcagccgtccagtgcagaggc 11638
>gb|AC154619.2| Mus musculus BAC clone RP23-322I21 from 16, complete sequence Length = 191616 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 aatgcatgcatccatatgca 430 |||||||||||||||||||| Sbjct: 113918 aatgcatgcatccatatgca 113937
>emb|AL390894.2|CNS06C7W Human chromosome 14 DNA sequence BAC R-572M18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 177032 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ctactgaaagaacagcacca 620 |||||||||||||||||||| Sbjct: 30010 ctactgaaagaacagcacca 30029
>gb|AC005119.9|AC005119 Drosophila melanogaster, chromosome 2L, region 36B1-36B2, P1 clone DS06436, complete sequence Length = 68379 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agccccacagatgcatcttg 282 |||||||||||||||||||| Sbjct: 52315 agccccacagatgcatcttg 52334
>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete sequence Length = 262525 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agccccacagatgcatcttg 282 |||||||||||||||||||| Sbjct: 160912 agccccacagatgcatcttg 160931
>emb|CT033778.16| Mouse DNA sequence from clone RP23-424G4 on chromosome 14, complete sequence Length = 184788 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 ccaactttccagccccacag 272 |||||||||||||||||||| Sbjct: 177794 ccaactttccagccccacag 177775
>emb|AL807798.17| Zebrafish DNA sequence from clone CH211-250N8, complete sequence Length = 173032 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 aatgaaatatgcggtttcta 83 |||||||||||||||||||| Sbjct: 35444 aatgaaatatgcggtttcta 35463
>gb|M61229.1|DROMHC D.melanogaster myosin heavy chain gene, complete cds Length = 22663 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 agccccacagatgcatcttg 282 |||||||||||||||||||| Sbjct: 10476 agccccacagatgcatcttg 10495 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,015,568 Number of Sequences: 3902068 Number of extensions: 5015568 Number of successful extensions: 96473 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96173 Number of HSP's gapped (non-prelim): 296 length of query: 702 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 679 effective length of database: 17,143,297,704 effective search space: 11640299141016 effective search space used: 11640299141016 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
