Clone Name | rbasd21b02 |
---|---|
Clone Library Name | barley_pub |
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 993 bits (501), Expect = 0.0 Identities = 580/603 (96%), Gaps = 3/603 (0%) Strand = Plus / Minus Query: 1 taatatatncntggnaacttttatattaagcca-gggtacaaatagattcatcgtggcga 59 |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 631 taatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggcga 573 Query: 60 ctcttattggaacaagggaaaaagacaaatacataagtaagctgatacattggcttccat 119 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 572 ctcttattggaacaagggaaaaagacaaatacataagtaagatgatacattggcttccat 513 Query: 120 acagctgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaaa 179 ||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 512 acagctgatggtatcaagattattcaagacaaaatgacaatacgaccatggccatagaaa 453 Query: 180 tcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacag 239 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 452 tcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacag 393 Query: 240 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 333 Query: 300 acattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgaca 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 332 acattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgcgtgaca 273 Query: 360 tctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 272 tctggttcaccggattcagggagaagattcagtttaggatagtcactagggcattttgga 213 Query: 420 ccgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaa 479 || |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| Sbjct: 212 ccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaa 153 Query: 480 cggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacc 539 |||||||||||||||||||||| || |||||| |||||||||||| |||||||||||| Sbjct: 152 tggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacc 93 Query: 540 tggacctgctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatact 599 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 92 tggacctgctccagaactaaaccc-agtatgagaacacaaatgaccacactcttaatact 34 Query: 600 ctt 602 ||| Sbjct: 33 ctt 31
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 946 bits (477), Expect = 0.0 Identities = 574/603 (95%), Gaps = 3/603 (0%) Strand = Plus / Minus Query: 1 taatatatncntggnaacttttatattaagcca-gggtacaaatagattcatcgtggcga 59 |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 638 taatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggcga 580 Query: 60 ctcttattggaacaagggaaaaagacaaatacataagtaagctgatacattggcttccat 119 | ||||||||||||||||||||| | |||| |||||||||| ||||||||| |||| || Sbjct: 579 cccttattggaacaagggaaaaacagaaatgcataagtaagatgatacatttccttcgat 520 Query: 120 acagctgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaaa 179 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 519 acagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaa 460 Query: 180 tcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacag 239 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 tcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacaa 400 Query: 240 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 340 Query: 300 acattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgaca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 acattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgaca 280 Query: 360 tctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaa 419 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| | Sbjct: 279 tctggttcaccggattcagggagaagattaagtttaggatagtcactagggcattttgga 220 Query: 420 ccgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaa 479 || |||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| Sbjct: 219 ccacttatgattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaa 160 Query: 480 cggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacc 539 ||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||| Sbjct: 159 cggcaagtgttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacc 100 Query: 540 tggacctgctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatact 599 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 99 tggacctgctccagaactaaaccc-agtatgagaacacaaatgaccacactcttaatact 41 Query: 600 ctt 602 ||| Sbjct: 40 ctt 38
>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2) Length = 453 Score = 690 bits (348), Expect = 0.0 Identities = 418/440 (95%), Gaps = 1/440 (0%) Strand = Plus / Minus Query: 20 tttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaacaaggga 78 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 440 tttatattaagccaagggtacaaatagattcatcgtggcgacccttattggaacaaggga 381 Query: 79 aaaagacaaatacataagtaagctgatacattggcttccatacagctgatggtatcaaga 138 |||| | |||| |||||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 380 aaaacagaaatgcataagtaagatgatacatttccttcgatacagctgatggtatcaaga 321 Query: 139 ttattcaagaaaaaatgactatacgaccttggccatagaaatcatgcacaagaacgcatg 198 |||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 320 ttattcaagacaaaatgacaatacgaccttggccatagaaatcatgcacaagaaggcatg 261 Query: 199 attaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgc 258 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 260 attaggattcaacagactgaatgactgcaccatcattacaaaaacgggcacatgcgttgc 201 Query: 259 tgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcac 318 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 200 tgcagagtcccatgtcgaatttcatctcttggccatggaaaacattgtccatgttgtcac 141 Query: 319 agacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcag 378 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 140 agacagaattcctgcatccaatggtgcagtactgagtgacatcgggttcaccggattcag 81 Query: 379 ggagaagattcagtttaggatagtcactaggacattttgaaccgcttatgattttacaac 438 |||||||||| |||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct: 80 ggagaagattaagtttaggatagtcactagggcattttggaccacttatgattttacaac 21 Query: 439 cacaagcacctgcacagact 458 |||||||||||| |||||| Sbjct: 20 gacaagcacctgcgcagact 1
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 662 bits (334), Expect = 0.0 Identities = 541/604 (89%), Gaps = 5/604 (0%) Strand = Plus / Minus Query: 1 taatatatncntggnaacttttatattaagcca-gggtacaaatagattcatcgtggcga 59 |||||||| | ||| |||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 656 taatatatccatgg-aacttttatattaagccaagggtataaatagattcatcgtgggtt 598 Query: 60 ctcttattggaacaagggaaaaag-acaaatacataagtaagctgatacattggcttcca 118 ||||||||||||| ||||||||| | |||||||||| |||| ||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 119 tacagctgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaa 178 | | | |||||||||||||||| || || | |||||||| | |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 179 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238 ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 239 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 299 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 358 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 359 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 418 || |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 419 accgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaa 478 ||||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538 |||||| | |||||||||||||||| | |||| |||||||||||||||| | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 539 ctggacctgctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatac 598 |||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||| Sbjct: 118 ttggacctgctccagaactaaaccc-aatatgagaacacaaataaccacgctcttaatac 60 Query: 599 tctt 602 |||| Sbjct: 59 tctt 56
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 632 bits (319), Expect = e-178 Identities = 490/543 (90%), Gaps = 3/543 (0%) Strand = Plus / Minus Query: 40 aaatagattcatcgtggcgactcttattggaacaagggaaaaag-acaaatacataagta 98 ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| || Sbjct: 544 aaatagattcatcgtggcgactcttattggaacgagggaaaaaacagaaatacataacta 485 Query: 99 agctgatacattggcttccatacagctgatggtatcaagattattcaagaaaaaatgact 158 || ||||||||| ||||| || | |||||||||||||||| || || | |||||||| Sbjct: 484 agatgatacatttgcttcgatgtgg-tgatggtatcaagattgttgaacagaaaatgaca 426 Query: 159 atacgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactga 218 | ||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| Sbjct: 425 aaacgaccttggccatagaaatcatgcccaagaaggcatgattaggcttcaagagactga 366 Query: 219 atgactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 278 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 atgacttcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaat 306 Query: 279 ttcatctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatcca 338 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 305 ttcatctcttggccacgggaaacattgtccatgttgtcacagacggaagtcctgcatcca 246 Query: 339 atggtgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttagga 398 || |||||||||| ||| ||| |||||||||||||||||||||||||||||| |||||| Sbjct: 245 attgtgcagtactcagtcgcatttggttcaccggattcagggagaagattcagcttagga 186 Query: 399 tagtcactaggacattttgaaccgcttatgattttacaaccacaagcacctgcacagact 458 ||||| ||||||||| ||| ||||||||||||||||||||||||||| ||| |||||| Sbjct: 185 tagtccctaggacatgttgggccgcttatgattttacaaccacaagcagttgcgcagact 126 Query: 459 ggacgggaaccaccggcgaaacggcaagtgttgtagcagtttctggcaaacgtggtcttg 518 || ||||||||||| ||||||||||| | |||||||||||||||| | |||| ||||| Sbjct: 125 ggtcgggaaccaccagcgaaacggcaggcgttgtagcagtttctgcccgtcgtgttcttg 66 Query: 519 cagcaactctttccctccacctggacctgctccagaactaaaccctagtatgagaacaca 578 ||||||||||| || || || |||||||||||||||||||||||| | |||||||||||| Sbjct: 65 cagcaactcttgccttctacttggacctgctccagaactaaaccc-aatatgagaacaca 7 Query: 579 aat 581 ||| Sbjct: 6 aat 4
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 618 bits (312), Expect = e-174 Identities = 489/544 (89%), Gaps = 3/544 (0%) Strand = Plus / Minus Query: 60 ctcttattggaacaagggaaaaag-acaaatacataagtaagctgatacattggcttcca 118 ||||||||||||| ||||||||| | |||||||||| |||| ||||||||| ||||| | Sbjct: 597 ctcttattggaacgagggaaaaaacagaaatacataactaagatgatacatttgcttcga 538 Query: 119 tacagctgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaa 178 | | | |||||||||||||||| || || | |||||||| | |||||||||||||||||| Sbjct: 537 t-ctggtgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaa 479 Query: 179 atcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattaca 238 ||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 478 atcatgcccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattaca 419 Query: 239 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaa 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 418 gaaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggga 359 Query: 299 aacattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgac 358 |||||||||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| | Sbjct: 358 aacattgtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgc 299 Query: 359 atctggttcaccggattcagggagaagattcagtttaggatagtcactaggacattttga 418 || |||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| Sbjct: 298 atttggttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgg 239 Query: 419 accgcttatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaa 478 ||||||||||||||||||||||||||| ||| |||||||| ||||||||||| ||||| Sbjct: 238 gccgcttatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaa 179 Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538 |||||| | |||||||||||||||| | |||| |||||||||||||||| | || || Sbjct: 178 acggcaggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctac 119 Query: 539 ctggacctgctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatac 598 |||||||||||||||||||||||| | ||||||||||||||| ||||| |||||||||| Sbjct: 118 ttggacctgctccagaactaaaccc-aatatgagaacacaaataaccacgctcttaatac 60 Query: 599 tctt 602 |||| Sbjct: 59 tctt 56
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 591 bits (298), Expect = e-165 Identities = 434/478 (90%), Gaps = 1/478 (0%) Strand = Plus / Minus Query: 125 tgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaaatcatg 184 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 532 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 473 Query: 185 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 244 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 472 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 413 Query: 245 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacatt 304 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 412 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacatt 353 Query: 305 gtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctgg 364 |||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| ||| ||| Sbjct: 352 gtccatgttgtcacagacggaagtccggcatccaattgtgcagtactcagtcgcatttgg 293 Query: 365 ttcaccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgct 424 ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| ||||| Sbjct: 292 ttcaccggattcagggagaagattcagcttaggatagtccctaggacatgttgggccgct 233 Query: 425 tatgattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggca 484 |||||||||||||||||||||| ||| |||||||| ||||||||||| ||||||||||| Sbjct: 232 tatgattttacaaccacaagcagttgcgcagactggtcgggaaccaccagcgaaacggca 173 Query: 485 agtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggac 544 | |||||||||||||||| | |||| |||||||||||||||| | || || ||||| Sbjct: 172 ggcgttgtagcagtttctgcccgtcgtgttcttgcagcaactcttggcttctacttggac 113 Query: 545 ctgctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatactctt 602 ||||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||| Sbjct: 112 ctgctccagaactaaaccc-aatatgagaacacaaataaccacgctcttaatactctt 56
>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3) Length = 491 Score = 571 bits (288), Expect = e-159 Identities = 438/484 (90%), Gaps = 3/484 (0%) Strand = Plus / Minus Query: 16 aacttttatattaagcca-gggtacaaatagattcatcgtggcgactcttattggaacaa 74 |||||||||||||||||| ||| | ||||||||||||||||| ||||||||||||||| | Sbjct: 483 aacttttatattaagccaagggcataaatagattcatcgtggtgactcttattggaacga 424 Query: 75 gggaaaaag-acaaatacataagtaagctgatacattggcttccatacagctgatggtat 133 |||||||| | |||||||||| |||| ||||||||| ||||| || | | ||||||||| Sbjct: 423 gggaaaaaacagaaatacataactaagatgatacatttgcttcgat-ctggtgatggtat 365 Query: 134 caagattattcaagaaaaaatgactatacgaccttggccatagaaatcatgcacaagaac 193 ||||||| || || | ||||||| | ||||||||||||||||||||||||| |||||| Sbjct: 364 caagattgttgaacagaaaatgaaaaaacgaccttggccatagaaatcatgcccaagaag 305 Query: 194 gcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgc 253 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 304 gcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacgggcacatgc 245 Query: 254 gttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgtt 313 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 244 gttgctgcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccaggtt 185 Query: 314 gtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccgga 373 ||||||||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||| Sbjct: 184 gtcacagacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccgga 125 Query: 374 ttcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttatgatttt 433 |||||||||||||||||| ||||||||||| |||||||| ||| |||||||||||||| Sbjct: 124 ttcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttatgatttt 65 Query: 434 acaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtgttgta 493 ||||||||||||| ||| |||||||| ||||||||||||||||||||||| | |||||| Sbjct: 64 acaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggcgttgta 5 Query: 494 gcag 497 |||| Sbjct: 4 gcag 1
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 515 bits (260), Expect = e-143 Identities = 293/302 (97%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 1 taatatatncntggnaacttttatattaagcca-gggtacaaatagattcatcgtggcga 59 |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2331 taatatatccatgg-aacttttatattaagccaagggtacaaatagattcatcgtggcga 2273 Query: 60 ctcttattggaacaagggaaaaagacaaatacataagtaagctgatacattggcttccat 119 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2272 ctcttgttggaacaagggaaaaagacaaatacataagtaagatgatacattggcttccat 2213 Query: 120 acagctgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaaa 179 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2212 acagctgatggtatcaagattattcaagacaaaatgacaatacgaccttggccatagaaa 2153 Query: 180 tcatgcacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacag 239 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2152 tcatgcacaagaaggcatgattaggcttcaacagactgaatgactgcaccatcattacag 2093 Query: 240 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2092 aaacgggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaa 2033 Query: 300 ac 301 || Sbjct: 2032 ac 2031 Score = 355 bits (179), Expect = 1e-94 Identities = 222/235 (94%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 368 accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 427 |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||| Sbjct: 1776 accggattcagggagaagattcagtttaggatagtcactagggcattttggaccacttat 1717 Query: 428 gattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagt 487 ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 1716 gattttacaacgacaagcacctgcgcagactggacgggaaccacccgcgaaacggcaagt 1657 Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| || |||||| |||||||||||| |||||||||||||||||||| Sbjct: 1656 gttgtagcagtttctagctaacgtgtccttgcagcaactttttccctccacctggacctg 1597 Query: 548 ctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatactctt 602 ||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 1596 ctccagaactaaaacc-agtatgagaacacaaatgaccacactcttaatactctt 1543 Score = 131 bits (66), Expect = 3e-27 Identities = 69/70 (98%) Strand = Plus / Minus Query: 301 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 360 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1937 cattgtccatgttgtcacagacagaattcgtgcatccaatggtgcagtactgagtgacat 1878 Query: 361 ctggttcacc 370 |||||||||| Sbjct: 1877 ctggttcacc 1868
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 513 bits (259), Expect = e-142 Identities = 368/403 (91%), Gaps = 1/403 (0%) Strand = Plus / Minus Query: 200 ttaggcttcaacagactgaatgactgcaccatcattacagaaacgggcacatgcgttgct 259 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 414 ttaggcttcaacagactgaatgacatcaccatcattacagaaacgggcacatgcgttgct 355 Query: 260 gcagagtcccatgtcgaatttcatctcttggccacggaaaacattgtccatgttgtcaca 319 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 354 gcagagtcccatgtcgaatttcatctcttggccacgggaaacattgtccatgttgtcaca 295 Query: 320 gacagaattcctgcatccaatggtgcagtactgagtgacatctggttcaccggattcagg 379 ||| ||| ||||||||||||| |||||||||| ||| ||| |||||||||||||||||| Sbjct: 294 gacggaagtcctgcatccaattgtgcagtactcagtcgcatttggttcaccggattcagg 235 Query: 380 gagaagattcagtttaggatagtcactaggacattttgaaccgcttatgattttacaacc 439 |||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| Sbjct: 234 gagaagattcagcttaggatagtccctaggacatgttgggccgcttatgattttacaacc 175 Query: 440 acaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtgttgtagcagtt 499 ||||||| ||| |||||||| |||||||||||||||||| |||| | |||||||||||| Sbjct: 174 acaagcagttgcgcagactggtcgggaaccaccggcgaaatggcaggcgttgtagcagtt 115 Query: 500 tctggcaaacgtggtcttgcagcaactctttccctccacctggacctgctccagaactaa 559 |||| | |||| |||||||||||||||| || || || |||||||||||||||||||| Sbjct: 114 tctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctgctccagaactaa 55 Query: 560 accctagtatgagaacacaaatgaccacactcttaatactctt 602 |||| | ||||||||||||||| ||||| |||||||||||||| Sbjct: 54 accc-aatatgagaacacaaataaccacgctcttaatactctt 13
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 264 bits (133), Expect = 3e-67 Identities = 166/177 (93%) Strand = Plus / Minus Query: 125 tgatggtatcaagattattcaagaaaaaatgactatacgaccttggccatagaaatcatg 184 |||||||||||||||| || || | |||||||| | |||||||||||||||||||||||| Sbjct: 2230 tgatggtatcaagattgttgaacagaaaatgacaaaacgaccttggccatagaaatcatg 2171 Query: 185 cacaagaacgcatgattaggcttcaacagactgaatgactgcaccatcattacagaaacg 244 | |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2170 cccaagaaggcatgattaggcttcaacagactgaatgacttcaccatcattacagaaacg 2111 Query: 245 ggcacatgcgttgctgcagagtcccatgtcgaatttcatctcttggccacggaaaac 301 |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 2110 ggcacatgcgttgctgcagagtcccatgtcaaatttcatctcttggccacgggaaac 2054 Score = 260 bits (131), Expect = 5e-66 Identities = 210/235 (89%), Gaps = 1/235 (0%) Strand = Plus / Minus Query: 368 accggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttat 427 |||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||| Sbjct: 1797 accggattcagggagaagattcagcttaggatagtccctaggacaggttgggccgcttat 1738 Query: 428 gattttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagt 487 ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| | Sbjct: 1737 gattttacaaccacaagcagttgcgcagactggtcgggaaccaccggcgaaacggcaggc 1678 Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 |||||||||||||||| | |||| |||||||||||||||| || || || |||||||| Sbjct: 1677 gttgtagcagtttctgcccgtcgtgttcttgcagcaactcttgccttctacttggacctg 1618 Query: 548 ctccagaactaaaccctagtatgagaacacaaatgaccacactcttaatactctt 602 |||||||||||||||| | ||||||||||||||| ||||| |||||||||||||| Sbjct: 1617 ctccagaactaaaccc-aatatgagaacacaaataaccacgctcttaatactctt 1564 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 301 cattgtccatgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacat 360 ||||||||||||||||||| || ||| ||||||||||||| |||||||||| ||| |||| Sbjct: 1963 cattgtccatgttgtcacaaacggaagtcctgcatccaattgtgcagtactcagtcacat 1904 Query: 361 ctggttcacc 370 ||||||||| Sbjct: 1903 ttggttcacc 1894
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 236 bits (119), Expect = 7e-59 Identities = 356/433 (82%), Gaps = 4/433 (0%) Strand = Plus / Minus Query: 163 gaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaatga 222 ||||| ||||| ||||||||||||||||| ||||||||| |||| | ||| |||||| Sbjct: 496 gacctcggccaaagaaatcatgcacaagagtgcatgattaagcttggaaagatggaatga 437 Query: 223 ctgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaatttca 282 | ||||| | ||||||||||| ||||| | ||| |||||||| |||||||| ||||| Sbjct: 436 cggcacccttgttacagaaacgaacacattctttgttgcagagtagcatgtcgattttca 377 Query: 283 tctcttggccacggaaaacattgtccatgttgtcacagacagaattcctgcatccaatgg 342 ||||||||||| | | ||||||||||||||||||||| || ||| || ||||||| |||| Sbjct: 376 tctcttggccatgaataacattgtccatgttgtcacaaacggaagtcatgcatcctatgg 317 Query: 343 tgcagtactgagtgacatctggttcaccggattcagggagaagattcagtttaggatagt 402 ||||||||| ||||||||| ||||||||||||||| | ||||||| |||||||| |||| Sbjct: 316 tgcagtactcagtgacatccggttcaccggattcaagtagaagatgcagtttagaatagc 257 Query: 403 cactaggacattttgaaccgcttatgattttacaaccacaagcacctgcacagactggac 462 || ||||||| || ||| || ||||||||| |||||| | ||| ||| ||| | Sbjct: 256 catcaggacatgtt---ccgtctacgattttacatccacaaagagatgcgcagcgtggcc 200 Query: 463 gggaaccaccggcgaaacggcaagtgttgtagcagtttctggcaaacgtggtcttgcagc 522 ||||| ||||| |||||||| ||| ||||||||||| ||| | ||| || ||||| Sbjct: 199 gggaagtaccggttaaacggcagacgttatagcagtttcttgcagatgtgctcgggcagc 140 Query: 523 aactctttccctccacctggacctgctccagaactaaaccctagtatgagaacacaaatg 582 ||||||||||||| |||||||||||| ||||||||||| ||||||| ||| ||||||| Sbjct: 139 aactctttccctctacctggacctgccccagaactaaa-cctagtacgaggacacaaagc 81 Query: 583 accacactcttaa 595 ||||||| ||||| Sbjct: 80 accacacacttaa 68
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 133 bits (67), Expect = 7e-28 Identities = 208/255 (81%) Strand = Plus / Minus Query: 309 atgttgtcacagacagaattcctgcatccaatggtgcagtactgagtgacatctggttca 368 ||||||||||| || ||| || |||||||||| |||||||||| || |||||| |||| Sbjct: 386 atgttgtcacaaacggaagtcatgcatccaatagtgcagtactcagctgcatctgcttca 327 Query: 369 ccggattcagggagaagattcagtttaggatagtcactaggacattttgaaccgcttatg 428 ||| |||||| |||||||| | ||||||| | ||||| ||||| ||| | || || | Sbjct: 326 ccgtattcagagagaagatgctgtttaggccaatcacttggacaagttgtaacgtctaag 267 Query: 429 attttacaaccacaagcacctgcacagactggacgggaaccaccggcgaaacggcaagtg 488 | |||||||||||| | |||||| |||||||| || | | |||| || |||||||| Sbjct: 266 agtttacaaccacatggacctgcgcagactgggcgcggagcaccagctaaacggcagaca 207 Query: 489 ttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctgc 548 |||||||||||| | || |||| |||||||||||||||| ||||| |||||||||||| Sbjct: 206 ttgtagcagtttattgccgtcgtgctcttgcagcaactcttgccctctacctggacctgc 147 Query: 549 tccagaactaaaccc 563 ||||||||||||||| Sbjct: 146 tccagaactaaaccc 132 Score = 85.7 bits (43), Expect = 2e-13 Identities = 112/135 (82%) Strand = Plus / Minus Query: 161 acgaccttggccatagaaatcatgcacaagaacgcatgattaggcttcaacagactgaat 220 |||||| ||||||||||||| | |||| ||| |||||||||||| | ||||| || | Sbjct: 549 acgaccatggccatagaaataaggcacgagagtgcatgattaggccccgacagatggatt 490 Query: 221 gactgcaccatcattacagaaacgggcacatgcgttgctgcagagtcccatgtcgaattt 280 ||| ||||| | |||||||||||| ||||||||||| |||||| | |||||||| || Sbjct: 489 gacggcacccttgttacagaaacggacacatgcgttgttgcagacttgcatgtcgatgtt 430 Query: 281 catctcttggccacg 295 ||||||||||||||| Sbjct: 429 catctcttggccacg 415
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 81.8 bits (41), Expect = 2e-12 Identities = 72/81 (88%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 515 cttgcagcaactctttccctccacctggacctgctccagaactaaaccctagtatgagaa 574 ||||||||||||||||||||| || ||||| ||||||||||||| ||| | || |||| Sbjct: 121 cttgcagcaactctttccctctacttggacatgctccagaactatccccaa-tacaagaa 63 Query: 575 cacaaatgaccacactcttaa 595 ||||||||||||||||||||| Sbjct: 62 cacaaatgaccacactcttaa 42
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 73.8 bits (37), Expect = 6e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 515 cttgcagcaactctttccctccacctggacctgctccagaactaaaccctagtatgagaa 574 ||||||||||||||||||||| || |||||||||||||||||| | ||| | || || | Sbjct: 122 cttgcagcaactctttccctctacttggacctgctccagaact-atccccaatacaagga 64 Query: 575 cacaaatgaccacactcttaa 595 |||||||||| |||||||||| Sbjct: 63 cacaaatgactacactcttaa 43
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 479 acggcaagtgttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccac 538 ||||||| ||||||||||||||| | | ||| ||||||||||||||||||| || || Sbjct: 141 acggcaaaggttgtagcagtttcttcctagggtgctcttgcagcaactctttccttctac 82 Query: 539 ctggacctgctccagaac 556 || ||||| |||||||| Sbjct: 81 ttgcacctgttccagaac 64
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence Length = 264425 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 acaagggaaaaagacaaataca 92 |||||||||||||||||||||| Sbjct: 6908 acaagggaaaaagacaaataca 6887
>gb|AC138101.8| Mus musculus chromosome 5, clone RP23-149H20, complete sequence Length = 211521 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 71 acaagggaaaaagacaaataca 92 |||||||||||||||||||||| Sbjct: 86367 acaagggaaaaagacaaataca 86346
>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159706 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 73 aagggaaaaagacaaatacata 94 |||||||||||||||||||||| Sbjct: 85293 aagggaaaaagacaaatacata 85272
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 acaagggaaaaagacaaataca 92 |||||||||||||||||||||| Sbjct: 41781 acaagggaaaaagacaaataca 41802
>gb|AC125194.4| Mus musculus BAC clone RP23-275K6 from chromosome 18, complete sequence Length = 155706 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 acaagggaaaaagacaaatacataa 95 |||||||||||||| |||||||||| Sbjct: 114727 acaagggaaaaagaaaaatacataa 114751
>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene Length = 892 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| | | ||| |||||||||||||||| || || || || ||||| Sbjct: 132 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 73 Query: 548 ctccagaac 556 |||||||| Sbjct: 72 ttccagaac 64
>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin Length = 641 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| | | |||||| ||||||||||||| || || || || ||||| Sbjct: 189 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 130 Query: 548 ctccagaac 556 |||||||| Sbjct: 129 ttccagaac 121
>emb|AJ439353.1|AGA439353 Anopheles gambiae BAC clone 30E5 Length = 167014 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 ggaaaacattgtccatgttgt 315 ||||||||||||||||||||| Sbjct: 33995 ggaaaacattgtccatgttgt 34015
>gb|AC013437.8| Homo sapiens BAC clone RP11-190J23 from 2, complete sequence Length = 167424 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 catgttgtcacagacagaatt 328 ||||||||||||||||||||| Sbjct: 92156 catgttgtcacagacagaatt 92136
>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene Length = 901 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| | | |||||| ||||||||||||| || || || || ||||| Sbjct: 132 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 73 Query: 548 ctccagaac 556 |||||||| Sbjct: 72 ttccagaac 64
>gb|AC150277.2| Mus musculus BAC clone RP23-97E12 from 18, complete sequence Length = 179399 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 71 acaagggaaaaagacaaatacataa 95 |||||||||||||| |||||||||| Sbjct: 54540 acaagggaaaaagaaaaatacataa 54564
>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds Length = 673 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| | | ||| |||||||||||||||| || || || || ||||| Sbjct: 140 gttgtagcagtttcttcctagggtgctcttgcagcaactcttgccttctacttgcacctg 81 Query: 548 ctccagaac 556 |||||||| Sbjct: 80 ttccagaac 72
>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds Length = 915 Score = 42.1 bits (21), Expect = 2.1 Identities = 57/69 (82%) Strand = Plus / Minus Query: 488 gttgtagcagtttctggcaaacgtggtcttgcagcaactctttccctccacctggacctg 547 ||||||||||||||| | | |||||| ||||||||||||| || || || || ||||| Sbjct: 177 gttgtagcagtttcttcccagggtggtcctgcagcaactcttgccttctacttgcacctg 118 Query: 548 ctccagaac 556 |||||||| Sbjct: 117 ttccagaac 109
>ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5 (Slc2a5), mRNA Length = 3097 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggtcttgcagcaactcttt 530 |||||||||||||||||||| Sbjct: 2461 tggtcttgcagcaactcttt 2442
>gb|AC004748.1| Homo sapiens chromosome 5, BAC clone 7h13 (LBNL H100), complete sequence Length = 110804 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 130 gtatcaagattattcaagaaaaaatgac 157 ||||||||||||| |||||||| ||||| Sbjct: 38088 gtatcaagattatccaagaaaacatgac 38061
>gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5, mRNA (cDNA clone MGC:32452 IMAGE:5043284), complete cds Length = 2080 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggtcttgcagcaactcttt 530 |||||||||||||||||||| Sbjct: 1836 tggtcttgcagcaactcttt 1817
>gb|AY587193.1| Araneus ventricosus flagelliform silk protein-1 (Ff1) mRNA, partial cds Length = 1836 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 ctccacctggacctgctcca 552 |||||||||||||||||||| Sbjct: 410 ctccacctggacctgctcca 391
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 attcaagaaaaaatgactat 160 |||||||||||||||||||| Sbjct: 9444015 attcaagaaaaaatgactat 9444034
>emb|AL133282.15| Human DNA sequence from clone RP11-264C15 on chromosome 9q32-34.11 Contains part of the ASTN2 gene for astrotactin2 (KIAA0634) and a novel gene, complete sequence Length = 130526 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttcaagaaaaaatgactata 161 |||||||||||||||||||| Sbjct: 105478 ttcaagaaaaaatgactata 105459
>emb|Z11873.1|SSGTFJKG S.salivarius gtfJ and gtfK genes for glucosyltransferase I and glucosyltransferase S Length = 10125 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 tacagctgatggtatcaaga 138 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>emb|BX957307.12| Zebrafish DNA sequence from clone CH211-117E20 in linkage group 6, complete sequence Length = 171645 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 578 aaatgaccacactcttaatactct 601 ||||||| |||||||||||||||| Sbjct: 51305 aaatgacaacactcttaatactct 51282
>gb|AC116341.2| Homo sapiens chromosome 5 clone RP11-144A5, complete sequence Length = 31443 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggaaaaagacaaatacataa 95 |||||||||||||||||||| Sbjct: 11773 ggaaaaagacaaatacataa 11792
>emb|BX322615.6| Zebrafish DNA sequence from clone DKEY-81L20 in linkage group 17, complete sequence Length = 120315 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 aacagactgaatgactgcac 228 |||||||||||||||||||| Sbjct: 61583 aacagactgaatgactgcac 61602
>gb|AC096952.5| Homo sapiens BAC clone RP11-191J2 from 4, complete sequence Length = 187578 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 attattcaagaaaaaatgac 157 |||||||||||||||||||| Sbjct: 121136 attattcaagaaaaaatgac 121117
>gb|AC113376.2| Homo sapiens chromosome 5 clone RP11-262B5, complete sequence Length = 161498 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 130 gtatcaagattattcaagaaaaaatgac 157 ||||||||||||| |||||||| ||||| Sbjct: 39330 gtatcaagattatccaagaaaacatgac 39357
>gb|AC112183.3| Homo sapiens chromosome 5 clone RP11-152F4, complete sequence Length = 163612 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggaaaaagacaaatacataa 95 |||||||||||||||||||| Sbjct: 160156 ggaaaaagacaaatacataa 160175
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 attcaagaaaaaatgactat 160 |||||||||||||||||||| Sbjct: 141415 attcaagaaaaaatgactat 141434
>dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930505E07 product:solute carrier family 2 (facilitated glucose transporter), member 5, full insert sequence Length = 3097 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggtcttgcagcaactcttt 530 |||||||||||||||||||| Sbjct: 2461 tggtcttgcagcaactcttt 2442
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 attcaagaaaaaatgactat 160 |||||||||||||||||||| Sbjct: 9442136 attcaagaaaaaatgactat 9442155
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggtcttgcagcaactcttt 530 |||||||||||||||||||| Sbjct: 55330 tggtcttgcagcaactcttt 55311
>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds; glycyl-tRNA synthetase (Z195D10.2), ornithine carbamoyltransferase (Z195D10.3), putative gag protein (Z195D10.5), putative SET-domain transcriptional regulator (Z195D10.7), putative oxysterol-binding protein (Z195D10.8), putative polyprotein (Z195D10.9), putative oxysterol-binding protein (Z195D10.10), putative gag-pol polyprotein (Z195D10.11), putative phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12), hypothetical protein (Z195D10.15), putative gag-pol polyprotein (Z195D10.16), putative polyprotein (Z195D10.17), putative retrotransposon protein (Z195D10.18), and prpol (Z195D10.19) genes, complete cds; and putative teosinte branched2 (Z195D10.20) gene, partial cds Length = 141939 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 533 ctccacctggacctgctccagaac 556 ||||||||| |||||||||||||| Sbjct: 70388 ctccacctgaacctgctccagaac 70411
>gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 mRNA, complete cds Length = 2069 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 511 tggtcttgcagcaactcttt 530 |||||||||||||||||||| Sbjct: 1825 tggtcttgcagcaactcttt 1806
>dbj|AP001707.1| Homo sapiens genomic DNA, chromosome 21q, section 51/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaaaagacaaatacataagtaagc 101 |||||||||||||||||| ||||| Sbjct: 223254 aaaaagacaaatacataaataagc 223231
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 130 gtatcaagattattcaagaaaaaa 153 ||||||| |||||||||||||||| Sbjct: 1771110 gtatcaacattattcaagaaaaaa 1771087
>gb|AC003961.1|AC003961 Human Cosmid g5129z180 from 7q31.3, complete sequence Length = 39526 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ttattcaagaaaaaatgact 158 |||||||||||||||||||| Sbjct: 13638 ttattcaagaaaaaatgact 13619
>gb|L25932.1|HUMLBR01 Homo sapiens integral nuclear envelope inner membrane protein (LBR) gene, 5' UTR, exons 1 and 2 Length = 5132 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 ggaaaaagacaaatacataa 95 |||||||||||||||||||| Sbjct: 4760 ggaaaaagacaaatacataa 4779
>gb|M64111.1|STRGTFJA Streptococcus salivarius glucosyltransferase I (gtfJ) gene, complete cds, and gtfK gene, 5' end Length = 4941 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 tacagctgatggtatcaaga 138 |||||||||||||||||||| Sbjct: 2450 tacagctgatggtatcaaga 2469
>dbj|AP000884.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B463J19, SOD-AML region, complete sequence Length = 137955 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 aaaaagacaaatacataagtaagc 101 |||||||||||||||||| ||||| Sbjct: 66565 aaaaagacaaatacataaataagc 66542 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,365,628 Number of Sequences: 3902068 Number of extensions: 5365628 Number of successful extensions: 103954 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 103782 Number of HSP's gapped (non-prelim): 150 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)