Clone Name	rbasd20m01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BC055267.1| Xenopus laevis golgi membrane protein SB140, mRNA...	615	e-173
2	gb|BC080486.1| Xenopus tropicalis MGC89839 protein, mRNA (cDNA c...	232	7e-58
3	ref|NM_001007976.1| Xenopus tropicalis MGC89839 protein (MGC8983...	232	7e-58
4	gb|BC089666.1| Xenopus tropicalis MGC89839 protein, mRNA (cDNA c...	232	7e-58
5	ref|XM_600461.2| PREDICTED: Bos taurus similar to Yip1 domain fa...	96	1e-16
6	ref|XM_517174.1| PREDICTED: Pan troglodytes similar to YIP1B (LO...	94	4e-16
7	gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, com...	86	1e-13
8	gb|BC089576.1| Mus musculus Yip1 domain family, member 7, mRNA (...	86	1e-13
9	gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete...	86	1e-13
10	gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complet...	86	1e-13
11	dbj|AK009405.1| Mus musculus adult male tongue cDNA, RIKEN full-...	86	1e-13
12	gb|AF217188.1|AF217188 Mus musculus YIP1B (Yip1b) mRNA, complete...	86	1e-13
13	ref|NM_023784.3| Mus musculus Yip1 domain family, member 7 (Yipf...	86	1e-13
14	ref|XM_532367.2| PREDICTED: Canis familiaris similar to Yip1 dom...	78	2e-11
15	gb|BC087475.1| Xenopus laevis hypothetical LOC496063, mRNA (cDNA...	68	2e-08
16	ref|XM_344236.2| PREDICTED: Rattus norvegicus similar to YIP1B (...	64	4e-07
17	ref|XM_518011.1| PREDICTED: Pan troglodytes similar to golgi mem...	56	9e-05
18	ref|XM_414661.1| PREDICTED: Gallus gallus similar to golgi membr...	56	9e-05
19	ref|XM_420728.1| PREDICTED: Gallus gallus similar to YIP1B (LOC4...	56	9e-05
20	gb|AY358863.1| Homo sapiens clone DNA143498 SB140 (UNQ3123) mRNA...	56	9e-05
21	ref|NM_030799.6| Homo sapiens Yip1 domain family, member 5 (YIPF...	56	9e-05
22	gb|BC014253.2| Homo sapiens Yip1 domain family, member 5, transc...	56	9e-05
23	gb|BC024737.1| Homo sapiens Yip1 domain family, member 5, transc...	56	9e-05
24	gb|BC007829.2| Homo sapiens Yip1 domain family, member 5, transc...	56	9e-05
25	emb|CR860365.1| Pongo pygmaeus mRNA; cDNA DKFZp459G1512 (from cl...	56	9e-05
26	emb|CR749463.1| Homo sapiens mRNA; cDNA DKFZp313L2216 (from clon...	56	9e-05
27	dbj|AK124065.1| Homo sapiens cDNA FLJ42071 fis, clone SYNOV20141...	56	9e-05
28	gb|AY037152.1| Homo sapiens golgi membrane protein SB140 mRNA, c...	56	9e-05
29	dbj|AK054576.1| Homo sapiens cDNA FLJ30014 fis, clone 3NB6920003...	56	9e-05
30	gb|AF318329.1|AF318329 Homo sapiens pp12723 mRNA, complete cds	56	9e-05
31	dbj|AB169519.1| Macaca fascicularis brain cDNA, clone: QccE-1352...	56	9e-05
32	gb|AY640929.1| Homo sapiens FINGER5-like variant D (SMAP-5) mRNA...	56	9e-05
33	gb|AY640928.1| Homo sapiens FINGER5 variant C (SMAP-5) mRNA, com...	56	9e-05
34	gb|AY640927.1| Homo sapiens FINGER5 variant B (SMAP-5) mRNA, com...	56	9e-05
35	gb|AY640926.1| Homo sapiens FINGER5 variant A (SMAP-5) mRNA, com...	56	9e-05
36	gb|AY640925.1| Homo sapiens FINGER5 (SMAP-5) mRNA, complete cds,...	56	9e-05
37	emb|BX950649.2| Gallus gallus finished cDNA, clone ChEST611j14	56	9e-05
38	emb|CR354010.1| Gallus gallus finished cDNA, clone ChEST595m18	56	9e-05
39	gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O2...	56	9e-05
40	gb|AF140225.1|AF140225 Homo sapiens unknown mRNA	56	9e-05
41	emb|BX935568.1| Gallus gallus finished cDNA, clone ChEST81o6	56	9e-05
42	emb|BX935861.1| Gallus gallus finished cDNA, clone ChEST164a22	56	9e-05
43	emb|BX930404.1| Gallus gallus finished cDNA, clone ChEST618g7	56	9e-05
44	emb|BX647859.1|HSM808005 Homo sapiens mRNA; cDNA DKFZp313L2216 (...	56	9e-05
45	dbj|AB014733.1| Homo sapiens mRNA for SMAP-5, partial cds	56	9e-05
46	gb|AC146894.4| X. tropicalis BAC clone containing gene for egr, ...	44	0.34
47	gb|AC156244.2| Xenopus tropicalis clone CH216-92I18, complete se...	44	0.34
48	gb|AC109193.16| Mus musculus chromosome 5, clone RP24-352I22, co...	42	1.3
49	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
50	dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
51	gb|BC092016.1| Xenopus laevis cDNA clone IMAGE:6325313, partial cds	42	1.3
52	gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome	40	5.3
53	gb|AC002299.1|HUAC002299 Homo sapiens Chromosome 16 BAC clone CI...	40	5.3
54	gb|AC130448.2| Homo sapiens chromosome 16 clone CTA-113A6, compl...	40	5.3
55	ref|NM_002738.5| Homo sapiens protein kinase C, beta 1 (PRKCB1),...	40	5.3
56	gb|BC036472.1| Homo sapiens protein kinase C, beta 1, transcript...	40	5.3
57	gb|AC025048.8| Homo sapiens chromosome 17, clone CTD-2319I12, co...	40	5.3
58	gb|DP000039.1| Callicebus moloch target 106 genomic scaffold	40	5.3
59	gb|AC091118.2|AC091118 Homo sapiens chromosome 16 clone CTC-510K...	40	5.3
60	gb|AC025438.5|AC025438 Homo sapiens chromosome 16 clone CTC-470N...	40	5.3
61	gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, comp...	40	5.3
62	gb|M13975.1|HUMPKB Homo sapiens protein kinase C beta-II type (P...	40	5.3
63	gb|AE016830.1| Enterococcus faecalis V583, complete genome	40	5.3
64	emb|X07109.1|HSPKCB2A Human mRNA for protein kinase C (PKC) type...	40	5.3
65	gb|M18254.1|HUMPKC2 Human protein kinase C beta 1 gene, last exon	40	5.3
66	emb|X05971.1|HSPKCB2 Human protein kinase C gene beta-II D4 exon...	40	5.3

---

>gb|BC055267.1| Xenopus laevis golgi membrane protein SB140, mRNA (cDNA clone
            MGC:64391 IMAGE:6878697), complete cds
          Length = 1303

 Score =  615 bits (310), Expect = e-173
 Identities = 372/397 (93%), Gaps = 1/397 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    acatcaccacaacatgcatgntccttctgtggacgccaccaaaaacattacattnttacc 60
            |||||||||||||||||||| |||||||||  |||||||||||||||||||||| |||||
Sbjct: 1187 acatcaccacaacatgcatgttccttctgtaaacgccaccaaaaacattacattattacc 1128

                                                                        
Query: 61   ttataagccaggtgtattnattaacactgaagacattgagtcccttcagtatnaaaatgg 120
            |||||| |||||| |||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1127 ttataa-ccaggtatatttattaacactgaagacattgagtcccttcagtataaaaatgg 1069

                                                                        
Query: 121  atanctagatgttcattntttccattgtngtcccagatacataagaatgcacatgatngc 180
            ||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 1068 ataactagatgttcattatttccattgttgtcccagatacataagaatgcacatgatagc 1009

                                                                        
Query: 181  aatgctntctggnccattctgggagacaggattggnctttattatagggnnggcccactt 240
            |||||| ||||| |||||||||||||||||||||| |||||||||||||  |||||||||
Sbjct: 1008 aatgctctctggtccattctgggagacaggattggtctttattatagggttggcccactt 949

                                                                        
Query: 241  angtccaaatgaaaagaacatgctcaaaacacanagataagagcanagactccataaagt 300
            | |||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 948  aagtccaaattaaaagaacttgctcaaaacacagagataagagcaaagactccataaagt 889

                                                                        
Query: 301  aaagcgcaagggtaggcaactagaagctgctgtccgtccatggccaaagcagaaatgaag 360
            |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 888  aaagcgcaagggtaggcaactagaagttgctgtccatccatggccaaagcagaaatgaag 829

                                                 
Query: 361  atctttgaggcggagaaactncaccagccaattatta 397
            |||||||||||||||||||| ||||||||||||||||
Sbjct: 828  atctttgaggcggagaaactgcaccagccaattatta 792

---

>gb|BC080486.1| Xenopus tropicalis MGC89839 protein, mRNA (cDNA clone MGC:89839
           IMAGE:7028759), complete cds
          Length = 1180

 Score =  232 bits (117), Expect = 7e-58
 Identities = 232/271 (85%), Gaps = 5/271 (1%)
 Strand = Plus / Minus

                                                                       
Query: 127 agatgttcattntttccattgtngtcccagatacataagaatgcacatgatngcaatgct 186
           |||||||| || |||||||||| |||||||| |||| ||||||     ||| |||| |||
Sbjct: 984 agatgttcgttatttccattgttgtcccagagacattagaatgtga--gatagcaaagct 927

                                                                       
Query: 187 ntctggnccattctgggagacaggattggnctttattatagggnnggcccacttangtcc 246
            ||||| || ||||||||||||||||||| ||||||||   |   |||||||| | ||||
Sbjct: 926 ctctggtcctttctgggagacaggattggtctttattagctg-ttggcccactaaagtcc 868

                                                                       
Query: 247 aaatgaaaagaacat--gctcaaaacacanagataagagcanagactccataaagtaaag 304
           |||| |||| || ||  |||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 867 aaattaaaataaaatatgctcaaaacacagagataagagcaaacactccataaagtaaag 808

                                                                       
Query: 305 cgcaagggtaggcaactagaagctgctgtccgtccatggccaaagcagaaatgaagatct 364
           | ||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||
Sbjct: 807 cacaagggtaggcaactagaacctgttgtccatccatggccagagcagaaatgaagatct 748

                                          
Query: 365 ttgaggcggagaaactncaccagccaattat 395
           |||||||||||||||| ||||| ||||||||
Sbjct: 747 ttgaggcggagaaactgcaccaaccaattat 717



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 97/114 (85%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    acatcaccacaacatgcatgntccttctgtggacgccaccaaaaacattacattnttacc 60
            ||||||||| | |||||||| |||||||||| || |||||||  |||||||||| |||||
Sbjct: 1122 acatcaccatagcatgcatgttccttctgtgaacaccaccaa--acattacattgttacc 1065

                                                                  
Query: 61   ttataagccaggtgtattnattaacactgaagacatt--gagtcccttcagtat 112
            ||| || |||||  | || |||||||| |||||||||  |||||||||||||||
Sbjct: 1064 ttacaa-ccaggcat-tttattaacaccgaagacattgggagtcccttcagtat 1013

---

>ref|NM_001007976.1| Xenopus tropicalis MGC89839 protein (MGC89839), mRNA
          Length = 1180

 Score =  232 bits (117), Expect = 7e-58
 Identities = 232/271 (85%), Gaps = 5/271 (1%)
 Strand = Plus / Minus

                                                                       
Query: 127 agatgttcattntttccattgtngtcccagatacataagaatgcacatgatngcaatgct 186
           |||||||| || |||||||||| |||||||| |||| ||||||     ||| |||| |||
Sbjct: 984 agatgttcgttatttccattgttgtcccagagacattagaatgtga--gatagcaaagct 927

                                                                       
Query: 187 ntctggnccattctgggagacaggattggnctttattatagggnnggcccacttangtcc 246
            ||||| || ||||||||||||||||||| ||||||||   |   |||||||| | ||||
Sbjct: 926 ctctggtcctttctgggagacaggattggtctttattagctg-ttggcccactaaagtcc 868

                                                                       
Query: 247 aaatgaaaagaacat--gctcaaaacacanagataagagcanagactccataaagtaaag 304
           |||| |||| || ||  |||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 867 aaattaaaataaaatatgctcaaaacacagagataagagcaaacactccataaagtaaag 808

                                                                       
Query: 305 cgcaagggtaggcaactagaagctgctgtccgtccatggccaaagcagaaatgaagatct 364
           | ||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||
Sbjct: 807 cacaagggtaggcaactagaacctgttgtccatccatggccagagcagaaatgaagatct 748

                                          
Query: 365 ttgaggcggagaaactncaccagccaattat 395
           |||||||||||||||| ||||| ||||||||
Sbjct: 747 ttgaggcggagaaactgcaccaaccaattat 717



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 97/114 (85%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    acatcaccacaacatgcatgntccttctgtggacgccaccaaaaacattacattnttacc 60
            ||||||||| | |||||||| |||||||||| || |||||||  |||||||||| |||||
Sbjct: 1122 acatcaccatagcatgcatgttccttctgtgaacaccaccaa--acattacattgttacc 1065

                                                                  
Query: 61   ttataagccaggtgtattnattaacactgaagacatt--gagtcccttcagtat 112
            ||| || |||||  | || |||||||| |||||||||  |||||||||||||||
Sbjct: 1064 ttacaa-ccaggcat-tttattaacaccgaagacattgggagtcccttcagtat 1013

---

>gb|BC089666.1| Xenopus tropicalis MGC89839 protein, mRNA (cDNA clone MGC:107894
            IMAGE:7023531), complete cds
          Length = 1225

 Score =  232 bits (117), Expect = 7e-58
 Identities = 232/271 (85%), Gaps = 5/271 (1%)
 Strand = Plus / Minus

                                                                        
Query: 127  agatgttcattntttccattgtngtcccagatacataagaatgcacatgatngcaatgct 186
            |||||||| || |||||||||| |||||||| |||| ||||||     ||| |||| |||
Sbjct: 1002 agatgttcgttatttccattgttgtcccagagacattagaatgtga--gatagcaaagct 945

                                                                        
Query: 187  ntctggnccattctgggagacaggattggnctttattatagggnnggcccacttangtcc 246
             ||||| || ||||||||||||||||||| ||||||||   |   |||||||| | ||||
Sbjct: 944  ctctggtcctttctgggagacaggattggtctttattagctg-ttggcccactaaagtcc 886

                                                                        
Query: 247  aaatgaaaagaacat--gctcaaaacacanagataagagcanagactccataaagtaaag 304
            |||| |||| || ||  |||||||||||| ||||||||||| | ||||||||||||||||
Sbjct: 885  aaattaaaataaaatatgctcaaaacacagagataagagcaaacactccataaagtaaag 826

                                                                        
Query: 305  cgcaagggtaggcaactagaagctgctgtccgtccatggccaaagcagaaatgaagatct 364
            | ||||||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||
Sbjct: 825  cacaagggtaggcaactagaacctgttgtccatccatggccagagcagaaatgaagatct 766

                                           
Query: 365  ttgaggcggagaaactncaccagccaattat 395
            |||||||||||||||| ||||| ||||||||
Sbjct: 765  ttgaggcggagaaactgcaccaaccaattat 735



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 97/114 (85%), Gaps = 6/114 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    acatcaccacaacatgcatgntccttctgtggacgccaccaaaaacattacattnttacc 60
            ||||||||| | |||||||| |||||||||| || ||||||||  ||||||||| |||||
Sbjct: 1140 acatcaccatagcatgcatgttccttctgtgaacaccaccaaa--cattacattgttacc 1083

                                                                  
Query: 61   ttataagccaggtgtattnattaacactgaagacatt--gagtcccttcagtat 112
            ||| || |||||  | || |||||||| |||||||||  |||||||||||||||
Sbjct: 1082 ttacaa-ccaggcat-tttattaacaccgaagacattgggagtcccttcagtat 1031

---

>ref|XM_600461.2| PREDICTED: Bos taurus similar to Yip1 domain family, member 7
           (LOC522186), mRNA
          Length = 720

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 94/110 (85%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| |||||||| |||||||  ||||| |||||||| ||||||
Sbjct: 701 gcaaagagtccataaagtaaggcgcaaggataggcaatgagaagttgctgtccttccatg 642

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           |||||||| ||  ||||||| || ||||| |||| ||| |||||||||||
Sbjct: 641 gccaaagctgacgtgaagattttggaggctgagagactacaccagccaat 592

---

>ref|XM_517174.1| PREDICTED: Pan troglodytes similar to YIP1B (LOC461196), mRNA
          Length = 1081

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 88/102 (86%)
 Strand = Plus / Minus

                                                                       
Query: 291 tccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatggccaaagc 350
           |||||||||||| || |||||||||||||| |||||||||||||| ||||||  ||| ||
Sbjct: 834 tccataaagtaaggcacaagggtaggcaacaagaagctgctgtccttccatgtgcaaggc 775

                                                     
Query: 351 agaaatgaagatctttgaggcggagaaactncaccagccaat 392
            | |||||||||||| || || |||| ||| |||||||||||
Sbjct: 774 tgcaatgaagatcttggaagctgagagactacaccagccaat 733

---

>gb|AC109186.7| Mus musculus chromosome 5, clone RP24-351E22, complete sequence
          Length = 174202

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                         
Query: 283   gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
             ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 71805 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 71864

                                                          
Query: 343   gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
             ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 71865 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 71909

---

>gb|BC089576.1| Mus musculus Yip1 domain family, member 7, mRNA (cDNA clone
           MGC:107572 IMAGE:6758950), complete cds
          Length = 1320

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 819 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 760

                                                        
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 759 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 715

---

>gb|AC098710.2| Mus musculus BAC clone RP23-1L15 from 5, complete sequence
          Length = 213811

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                          
Query: 283    gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
              ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 196234 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 196175

                                                           
Query: 343    gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
              ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 196174 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 196130

---

>gb|AC093852.3| Homo sapiens BAC clone RP11-500G9 from 4, complete sequence
          Length = 158901

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                          
Query: 291    tccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatggccaaagc 350
              |||||||||||  || |||||||||||||| |||||||||||||| ||||||  ||| ||
Sbjct: 142770 tccataaagtatggcacaagggtaggcaacaagaagctgctgtccttccatgtgcaaggc 142829

                                                        
Query: 351    agaaatgaagatctttgaggcggagaaactncaccagccaat 392
               | |||||||||||| || || |||| ||| |||||||||||
Sbjct: 142830 tgcaatgaagatcttggaagctgagagactacaccagccaat 142871

---

>dbj|AK009405.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310016N21 product:YIP1B (Yip1b) mRNA,
           full insert sequence
          Length = 1174

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 785 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 726

                                                        
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 725 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 681

---

>gb|AF217188.1|AF217188 Mus musculus YIP1B (Yip1b) mRNA, complete cds
          Length = 765

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 746 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 687

                                                        
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 686 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 642

---

>ref|NM_023784.3| Mus musculus Yip1 domain family, member 7 (Yipf7), mRNA
          Length = 1320

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 89/105 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| || || ||||| || || |||||||||||||| ||||||
Sbjct: 819 gcaaagagtccataaagtaaggcacaggggtaagcgacaagaagctgctgtccttccatg 760

                                                        
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           ||||| || |||||||||||||| || || |||| ||| ||||||
Sbjct: 759 gccaaggccgaaatgaagatcttagaagctgagagactgcaccag 715

---

>ref|XM_532367.2| PREDICTED: Canis familiaris similar to Yip1 domain family, member
           7, transcript variant 1 (LOC475137), mRNA
          Length = 1104

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 86/102 (84%)
 Strand = Plus / Minus

                                                                       
Query: 291 tccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatggccaaagc 350
           |||||||| ||| || ||||||||||| || |||||||| ||||| | |||| |||| ||
Sbjct: 830 tccataaaataaggcacaagggtaggcgacgagaagctgttgtcctttcatgtccaaggc 771

                                                     
Query: 351 agaaatgaagatctttgaggcggagaaactncaccagccaat 392
            ||||||||||| || || ||||||| ||| |||||||||||
Sbjct: 770 cgaaatgaagattttggaagcggagagactacaccagccaat 729

---

>gb|BC087475.1| Xenopus laevis hypothetical LOC496063, mRNA (cDNA clone
           IMAGE:7202178), partial cds
          Length = 1063

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                       
Query: 310 gggtaggcaactagaagctgctgtccgtccatggccaaagcagaaatgaagatctttgag 369
           ||||| ||||| |||||||||||||||||||| |||||||  || || || || ||||| 
Sbjct: 882 gggtatgcaaccagaagctgctgtccgtccattgccaaagtggagataaacatttttgac 823

                                    
Query: 370 gcggagaaactncaccagccaatta 394
           || |||||||| ||||| |||||||
Sbjct: 822 gcagagaaactgcaccatccaatta 798

---

>ref|XM_344236.2| PREDICTED: Rattus norvegicus similar to YIP1B (predicted)
           (LOC364147), mRNA
          Length = 1124

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||||||||| || || ||||| || || || ||||| ||||| ||||||
Sbjct: 752 gcaaagagtccataaagtaaggcacaggggtaagcgacgaggagctgttgtccttccatg 693

                                  
Query: 343 gccaaagcagaaatgaagatctt 365
           ||||| || ||||||||||||||
Sbjct: 692 gccaaggctgaaatgaagatctt 670

---

>ref|XM_518011.1| PREDICTED: Pan troglodytes similar to golgi membrane protein SB140;
            smooth muscle cell associated protein 5 (LOC462162), mRNA
          Length = 2043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 283  gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
            ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 2024 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 1965

                                                              
Query: 343  gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
            || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 1964 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 1915

---

>ref|XM_414661.1| PREDICTED: Gallus gallus similar to golgi membrane protein SB140;
           smooth muscle cell associated protein 5 (LOC416344),
           mRNA
          Length = 1860

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 268 aacacanagataagagcanagactccataaagtaaagcgcaagggtaggcaactagaagc 327
           |||||| | || |||||| |||| ||||| | |||||| || || || || |||||||| 
Sbjct: 998 aacacagaaatgagagcaaagaccccatacaataaagcacagggatatgctactagaagt 939

                                                                       
Query: 328 tgctgtccgtccatggccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           || ||||| ||||| || || |||||||| ||||| || || ||||| || || ||||||
Sbjct: 938 tgttgtccttccattgctaaggcagaaataaagattttggaagcggaaaagctgcaccag 879

                
Query: 388 ccaat 392
           |||||
Sbjct: 878 ccaat 874

---

>ref|XM_420728.1| PREDICTED: Gallus gallus similar to YIP1B (LOC422774), mRNA
          Length = 1232

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||| || ||||| || ||||| ||||  |||||||||||||| ||||||
Sbjct: 915 gcaaagagtccatacagcaaagcacacgggtatgcaataagaagctgctgtccttccatg 856

                      
Query: 343 gccaaagcaga 353
           ||||| |||||
Sbjct: 855 gccaaggcaga 845

---

>gb|AY358863.1| Homo sapiens clone DNA143498 SB140 (UNQ3123) mRNA, complete cds
          Length = 1976

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 829 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 770

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 769 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 720

---

>ref|NM_030799.6| Homo sapiens Yip1 domain family, member 5 (YIPF5), transcript
           variant 2, mRNA
          Length = 3126

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 861 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 802

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 801 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 752

---

>gb|BC014253.2| Homo sapiens Yip1 domain family, member 5, transcript variant 2,
           mRNA (cDNA clone MGC:20982 IMAGE:4635110), complete cds
          Length = 1603

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 883 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 824

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 823 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 774

---

>gb|BC024737.1| Homo sapiens Yip1 domain family, member 5, transcript variant 2,
           mRNA (cDNA clone MGC:29907 IMAGE:5109854), complete cds
          Length = 1591

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 880 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 821

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 820 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 771

---

>gb|BC007829.2| Homo sapiens Yip1 domain family, member 5, transcript variant 2,
           mRNA (cDNA clone MGC:14147 IMAGE:3632787), complete cds
          Length = 1576

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 863 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 804

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 803 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 754

---

>emb|CR860365.1| Pongo pygmaeus mRNA; cDNA DKFZp459G1512 (from clone DKFZp459G1512)
          Length = 2022

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 863 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 804

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 803 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 754

---

>emb|CR749463.1| Homo sapiens mRNA; cDNA DKFZp313L2216 (from clone DKFZp313L2216)
          Length = 2043

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 884 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 825

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 824 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 775

---

>dbj|AK124065.1| Homo sapiens cDNA FLJ42071 fis, clone SYNOV2014157, weakly  similar
            to Yeast D-lactate dehydrogenase
          Length = 2246

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 283  gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
            ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 1103 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 1044

                                                              
Query: 343  gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
            || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 1043 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 994

---

>gb|AY037152.1| Homo sapiens golgi membrane protein SB140 mRNA, complete cds
          Length = 1661

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 877 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 818

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 817 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 768

---

>dbj|AK054576.1| Homo sapiens cDNA FLJ30014 fis, clone 3NB692000330, weakly similar
           to YIP1 PROTEIN
          Length = 1575

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 882 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 823

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 822 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 773

---

>gb|AF318329.1|AF318329 Homo sapiens pp12723 mRNA, complete cds
          Length = 1548

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 834 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 775

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 774 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 725

---

>dbj|AB169519.1| Macaca fascicularis brain cDNA, clone: QccE-13521, similar to human
           golgi membrane protein SB140 (SMAP-5), mRNA, RefSeq:
           NM_030799.5
          Length = 1612

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 901 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 842

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 841 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 792

---

>gb|AY640929.1| Homo sapiens FINGER5-like variant D (SMAP-5) mRNA, complete
           sequence, alternatively spliced
          Length = 2149

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 992 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 933

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 932 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 883

---

>gb|AY640928.1| Homo sapiens FINGER5 variant C (SMAP-5) mRNA, complete cds,
            alternatively spliced
          Length = 2269

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 283  gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
            ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 1112 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 1053

                                                              
Query: 343  gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
            || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 1052 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 1003

---

>gb|AY640927.1| Homo sapiens FINGER5 variant B (SMAP-5) mRNA, complete cds,
           alternatively spliced
          Length = 1569

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 861 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 802

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 801 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 752

---

>gb|AY640926.1| Homo sapiens FINGER5 variant A (SMAP-5) mRNA, complete cds,
           alternatively spliced
          Length = 3126

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 861 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 802

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 801 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 752

---

>gb|AY640925.1| Homo sapiens FINGER5 (SMAP-5) mRNA, complete cds, alternatively
           spliced
          Length = 2018

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 861 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 802

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 801 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 752

---

>emb|BX950649.2| Gallus gallus finished cDNA, clone ChEST611j14
          Length = 1476

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 268 aacacanagataagagcanagactccataaagtaaagcgcaagggtaggcaactagaagc 327
           |||||| | || |||||| |||| ||||| | |||||| || || || || |||||||| 
Sbjct: 606 aacacagaaatgagagcaaagaccccatacaataaagcacagggatatgctactagaagt 547

                                                                       
Query: 328 tgctgtccgtccatggccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           || ||||| ||||| || || |||||||| ||||| || || ||||| || || ||||||
Sbjct: 546 tgttgtccttccattgctaaggcagaaataaagattttggaagcggaaaagctgcaccag 487

                
Query: 388 ccaat 392
           |||||
Sbjct: 486 ccaat 482

---

>emb|CR354010.1| Gallus gallus finished cDNA, clone ChEST595m18
          Length = 1651

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 268 aacacanagataagagcanagactccataaagtaaagcgcaagggtaggcaactagaagc 327
           |||||| | || |||||| |||| ||||| | |||||| || || || || |||||||| 
Sbjct: 782 aacacagaaatgagagcaaagaccccatacaataaagcacagggatatgctactagaagt 723

                                                                       
Query: 328 tgctgtccgtccatggccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           || ||||| ||||| || || |||||||| ||||| || || ||||| || || ||||||
Sbjct: 722 tgttgtccttccattgctaaggcagaaataaagattttggaagcggaaaagctgcaccag 663

                
Query: 388 ccaat 392
           |||||
Sbjct: 662 ccaat 658

---

>gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O22, complete sequence
          Length = 209114

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Plus

                                                                          
Query: 283    gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
              ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 122261 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 122320

                                                                
Query: 343    gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
              || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 122321 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 122370

---

>gb|AF140225.1|AF140225 Homo sapiens unknown mRNA
          Length = 774

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 755 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 696

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 695 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 646

---

>emb|BX935568.1| Gallus gallus finished cDNA, clone ChEST81o6
          Length = 1781

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 268 aacacanagataagagcanagactccataaagtaaagcgcaagggtaggcaactagaagc 327
           |||||| | || |||||| |||| ||||| | |||||| || || || || |||||||| 
Sbjct: 968 aacacagaaatgagagcaaagaccccatacaataaagcacagggatatgctactagaagt 909

                                                                       
Query: 328 tgctgtccgtccatggccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           || ||||| ||||| || || |||||||| ||||| || || ||||| || || ||||||
Sbjct: 908 tgttgtccttccattgctaaggcagaaataaagattttggaagcggaaaagctgcaccag 849

                
Query: 388 ccaat 392
           |||||
Sbjct: 848 ccaat 844

---

>emb|BX935861.1| Gallus gallus finished cDNA, clone ChEST164a22
          Length = 1233

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| ||| |||||| || ||||| || ||||| ||||  |||||||||||||| ||||||
Sbjct: 916 gcaaagagtccatacagcaaagcacacgggtatgcaataagaagctgctgtccttccatg 857

                      
Query: 343 gccaaagcaga 353
           ||||| |||||
Sbjct: 856 gccaaggcaga 846

---

>emb|BX930404.1| Gallus gallus finished cDNA, clone ChEST618g7
          Length = 701

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                       
Query: 268 aacacanagataagagcanagactccataaagtaaagcgcaagggtaggcaactagaagc 327
           |||||| | || |||||| |||| ||||| | |||||| || || || || |||||||| 
Sbjct: 560 aacacagaaatgagagcaaagaccccatacaataaagcacagggatatgctactagaagt 501

                                                                       
Query: 328 tgctgtccgtccatggccaaagcagaaatgaagatctttgaggcggagaaactncaccag 387
           || ||||| ||||| || || |||||||| ||||| || || ||||| || || ||||||
Sbjct: 500 tgttgtccttccattgctaaggcagaaataaagattttggaagcggaaaagctgcaccag 441

                
Query: 388 ccaat 392
           |||||
Sbjct: 440 ccaat 436

---

>emb|BX647859.1|HSM808005 Homo sapiens mRNA; cDNA DKFZp313L2216 (from clone DKFZp313L2216)
          Length = 2044

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 885 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 826

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 825 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 776

---

>dbj|AB014733.1| Homo sapiens mRNA for SMAP-5, partial cds
          Length = 2469

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 283 gcanagactccataaagtaaagcgcaagggtaggcaactagaagctgctgtccgtccatg 342
           ||| |||||||||| |  ||||||||||| || || |||| ||| |||||||| ||||||
Sbjct: 216 gcaaagactccatataacaaagcgcaaggatatgctactaaaagttgctgtccttccatg 157

                                                             
Query: 343 gccaaagcagaaatgaagatctttgaggcggagaaactncaccagccaat 392
           || || |||||||| || || || || || || ||||| ||||| |||||
Sbjct: 156 gctaatgcagaaataaatattttggaagcagaaaaactacaccatccaat 107

---

>gb|AC146894.4| X. tropicalis BAC clone containing gene for egr, complete sequence
          Length = 96960

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    ggtgtattnattaacactgaagaca 95
             |||||||| ||||||||||||||||
Sbjct: 10012 ggtgtatttattaacactgaagaca 10036

---

>gb|AC156244.2| Xenopus tropicalis clone CH216-92I18, complete sequence
          Length = 140675

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 71     ggtgtattnattaacactgaagaca 95
              |||||||| ||||||||||||||||
Sbjct: 138487 ggtgtatttattaacactgaagaca 138463

---

>gb|AC109193.16| Mus musculus chromosome 5, clone RP24-352I22, complete sequence
          Length = 144094

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 348   agcagaaatgaagatctttga 368
             |||||||||||||||||||||
Sbjct: 65122 agcagaaatgaagatctttga 65102

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 243      gtccaaatgaaaagaacatgc 263
                |||||||||||||||||||||
Sbjct: 30571685 gtccaaatgaaaagaacatgc 30571665

---

>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0069C14
          Length = 150579

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 243   gtccaaatgaaaagaacatgc 263
             |||||||||||||||||||||
Sbjct: 70248 gtccaaatgaaaagaacatgc 70228

---

>gb|BC092016.1| Xenopus laevis cDNA clone IMAGE:6325313, partial cds
          Length = 1867

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 253 aaagaacatgctcaaaacaca 273
           |||||||||||||||||||||
Sbjct: 837 aaagaacatgctcaaaacaca 817

---

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                              
Query: 251     gaaaagaacatgctcaaaacacanagataag 281
               ||||||| ||||||||||||| | |||||||
Sbjct: 2875466 gaaaagatcatgctcaaaacaaaaagataag 2875496

---

>gb|AC002299.1|HUAC002299 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-113A6  ~complete genomic
              sequence, complete sequence
          Length = 171681

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    tgaaaagaacatgctcaaaa 269
              ||||||||||||||||||||
Sbjct: 137410 tgaaaagaacatgctcaaaa 137429

---

>gb|AC130448.2| Homo sapiens chromosome 16 clone CTA-113A6, complete sequence
          Length = 171572

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgaaaagaacatgctcaaaa 269
             ||||||||||||||||||||
Sbjct: 34272 tgaaaagaacatgctcaaaa 34253

---

>ref|NM_002738.5| Homo sapiens protein kinase C, beta 1 (PRKCB1), transcript variant 2,
            mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tgaaaagaacatgctcaaaa 269
            ||||||||||||||||||||
Sbjct: 2677 tgaaaagaacatgctcaaaa 2696

---

>gb|BC036472.1| Homo sapiens protein kinase C, beta 1, transcript variant 2, mRNA
            (cDNA clone MGC:41878 IMAGE:5260547), complete cds
          Length = 3017

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tgaaaagaacatgctcaaaa 269
            ||||||||||||||||||||
Sbjct: 2659 tgaaaagaacatgctcaaaa 2678

---

>gb|AC025048.8| Homo sapiens chromosome 17, clone CTD-2319I12, complete sequence
          Length = 137921

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   caaagcagaaatgaagatct 364
             ||||||||||||||||||||
Sbjct: 20356 caaagcagaaatgaagatct 20375

---

>gb|DP000039.1| Callicebus moloch target 106 genomic scaffold
          Length = 208088

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   aatgaaaagaacatgctcaa 267
             ||||||||||||||||||||
Sbjct: 81425 aatgaaaagaacatgctcaa 81406

---

>gb|AC091118.2|AC091118 Homo sapiens chromosome 16 clone CTC-510K1, complete sequence
          Length = 158829

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgaaaagaacatgctcaaaa 269
             ||||||||||||||||||||
Sbjct: 41855 tgaaaagaacatgctcaaaa 41836

---

>gb|AC025438.5|AC025438 Homo sapiens chromosome 16 clone CTC-470N16, complete sequence
          Length = 158827

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgaaaagaacatgctcaaaa 269
             ||||||||||||||||||||
Sbjct: 41855 tgaaaagaacatgctcaaaa 41836

---

>gb|AC007339.8| Homo sapiens chromosome 16 clone RP11-305A7, complete sequence
          Length = 183646

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    gcagaaatgaagatctttga 368
              ||||||||||||||||||||
Sbjct: 115177 gcagaaatgaagatctttga 115196

---

>gb|M13975.1|HUMPKB Homo sapiens protein kinase C beta-II type (PRKCB1) mRNA, complete
            cds
          Length = 2955

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tgaaaagaacatgctcaaaa 269
            ||||||||||||||||||||
Sbjct: 2565 tgaaaagaacatgctcaaaa 2584

---

>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     taaagcgcaagggtaggcaa 319
               ||||||||||||||||||||
Sbjct: 1219572 taaagcgcaagggtaggcaa 1219591

---

>emb|X07109.1|HSPKCB2A Human mRNA for protein kinase C (PKC) type beta II
          Length = 3321

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tgaaaagaacatgctcaaaa 269
            ||||||||||||||||||||
Sbjct: 2638 tgaaaagaacatgctcaaaa 2657

---

>gb|M18254.1|HUMPKC2 Human protein kinase C beta 1 gene, last exon
          Length = 699

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 tgaaaagaacatgctcaaaa 269
           ||||||||||||||||||||
Sbjct: 655 tgaaaagaacatgctcaaaa 674

---

>emb|X05971.1|HSPKCB2 Human protein kinase C gene beta-II D4 exon and 3'-UT region
          Length = 2062

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 250 tgaaaagaacatgctcaaaa 269
           ||||||||||||||||||||
Sbjct: 877 tgaaaagaacatgctcaaaa 896


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,460,785
Number of Sequences: 3902068
Number of extensions: 2460785
Number of successful extensions: 44033
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43939
Number of HSP's gapped (non-prelim): 90
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---