ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21a24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475752.1| Oryza sativa (japonica cultivar-group), predic... 303 3e-79
2dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 8e-77
3gb|BT016648.1| Zea mays clone Contig481 mRNA sequence 182 8e-43
4gb|AY103606.1| Zea mays PCO150737 mRNA sequence 182 8e-43
5gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence 174 2e-40
6ref|NM_191814.1| Oryza sativa (japonica cultivar-group), predic... 172 8e-40
7gb|AF113521.1|AF113521 Zea mays putative transcription factor mR... 168 1e-38
8dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 167 5e-38
9dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
10gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
13dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
14gb|AY104818.1| Zea mays PCO063451 mRNA sequence 72 2e-09
15dbj|AB236828.1| Trifolium pratense RNA for putative nuclear anti... 70 9e-09
16dbj|AB236752.1| Trifolium pratense RNA for putative nuclear anti... 70 9e-09
17gb|AF110226.1| Nicotiana tabacum nuclear RNA binding protein (Rg... 58 3e-05
18gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (... 56 1e-04
19gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (... 56 1e-04
20ref|NM_192656.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
21dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
22dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
23dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
24ref|NM_117785.2| Arabidopsis thaliana RNA binding AT4G16830 mRNA... 52 0.002
25gb|DQ207876.1| Solanum tuberosum clone 092B12 nuclear RNA bindin... 52 0.002
26gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog (At... 52 0.002
27gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-lik... 52 0.002
28gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen hom... 52 0.002
29gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, comp... 52 0.002
30emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Co... 52 0.002
31dbj|AB236845.1| Trifolium pratense RNA for hypothetical protein,... 50 0.008
32emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance p... 50 0.008
33ref|XM_476001.1| Oryza sativa (japonica cultivar-group), predic... 48 0.031
34emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance p... 48 0.031
35dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
36gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete ... 46 0.12
37gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
38gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
39ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H... 44 0.49
40ref|XM_213983.3| PREDICTED: Rattus norvegicus similar to KIAA107... 44 0.49
41gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complet... 44 0.49
42gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, comple... 44 0.49
43emb|AJ007041.1|HSA7041 Homo sapiens mRNA for trithorax homologue 2 42 1.9
44emb|AL603650.10| Human DNA sequence from clone RP11-263F14 on ch... 42 1.9
45gb|AF042797.2| Takifugu rubripes FRG1 (FRG1), N-acylsphingosine ... 42 1.9
46gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109... 42 1.9
47gb|AF292120.1|AF292120 Takifugu rubripes clone 16-k18 squamous-c... 42 1.9
48gb|AF292119.1|AF292119 Takifugu rubripes clone 16-i12 squamous-c... 42 1.9
49ref|NM_058707.3| Caenorhabditis elegans LiPid Depleted family me... 42 1.9
50ref|NM_014727.1| Homo sapiens myeloid/lymphoid or mixed-lineage ... 42 1.9
51gb|AF186605.1|AF186605 Homo sapiens MLL2 protein mRNA, partial cds 42 1.9
52gb|AF043700.1| Caenorhabditis elegans cosmid K09H9, complete seq... 42 1.9
53emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chro... 42 1.9
54gb|BC011812.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, m... 40 7.6
55gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 7.6
56ref|XM_519350.1| PREDICTED: Pan troglodytes similar to GRIP and ... 40 7.6
57ref|XM_527071.1| PREDICTED: Pan troglodytes similar to Homeobox ... 40 7.6
58ref|NM_028900.2| Mus musculus golgi coiled coil 1 (Gcc1), mRNA 40 7.6
59gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluste... 40 7.6
60gb|BC066807.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clon... 40 7.6
61gb|BC081184.1| Xenopus laevis MGC84407 protein, mRNA (cDNA clone... 40 7.6
62ref|XM_953913.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
63ref|XM_331369.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.6
64gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.6
65gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, co... 40 7.6
66gb|BC059616.1| Danio rerio hypothetical protein LOC402878, mRNA ... 40 7.6
67gb|AC147243.2| Mus musculus BAC clone RP23-444P22 from chromosom... 40 7.6
68gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome... 40 7.6
69gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete... 40 7.6
70gb|AY710267.1| Banana virus X RNA-dependent RNA polymerase gene,... 40 7.6
71gb|BC021462.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clon... 40 7.6
72ref|XM_792752.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.6
73ref|XM_780125.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.6
74emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA ... 40 7.6
75emb|CR859994.1| Pongo pygmaeus mRNA; cDNA DKFZp459H158 (from clo... 40 7.6
76emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ... 40 7.6
77emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, ... 40 7.6
78gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Can... 40 7.6
79gb|BC014100.2| Homo sapiens GRIP and coiled-coil domain containi... 40 7.6
80emb|AL833358.1|HSM804671 Homo sapiens mRNA; cDNA DKFZp667D0214 (... 40 7.6
81gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 40 7.6
82dbj|AK123129.1| Homo sapiens cDNA FLJ41134 fis, clone BRACE2027970 40 7.6
83dbj|AK092878.1| Homo sapiens cDNA FLJ35559 fis, clone SPLEN2005009 40 7.6
84gb|AF110227.1| Arabidopsis thaliana nuclear RNA binding protein ... 40 7.6
85gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, comp... 40 7.6
86gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, comp... 40 7.6
87gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349... 40 7.6
88ref|NM_001002762.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily... 40 7.6
89ref|NM_024523.5| Homo sapiens GRIP and coiled-coil domain contai... 40 7.6
90ref|XM_691401.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.6
91gb|AC155322.5| Mus musculus 10 BAC RP24-149J3 (Roswell Park Canc... 40 7.6
92dbj|AK016531.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 7.6
93dbj|AK032253.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.6
94gb|AC158634.5| Mus musculus 10 BAC RP23-424C16 (Roswell Park Can... 40 7.6
95dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
96gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, complete cds 40 7.6
97gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complet... 40 7.6
98gb|AF525417.1| Homo sapiens Golgi coiled coil protein 1 mRNA, co... 40 7.6
99gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete s... 40 7.6
100ref|XM_575413.1| PREDICTED: Rattus norvegicus similar to GRIP an... 40 7.6
101gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana... 40 7.6
102dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.6
103gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (CDX1)... 40 7.6
104dbj|AK025942.1| Homo sapiens cDNA: FLJ22289 fis, clone HRC04173 40 7.6
105gb|AC000359.1|HSAC000359 Human cosmid g1572c264, complete sequence 40 7.6
106gb|AC000357.1|HSAC000357 Human cosmid g1572c101, complete sequence 40 7.6
107emb|AJ324296.1|HSA324296 Homo sapiens genomic sequence surroundi... 40 7.6
108gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, comple... 40 7.6
109gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromos... 40 7.6
110dbj|D25417.1|ANGNPRB Anguilla japonica NPR-B mRNA for natriureti... 40 7.6
111gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome 40 7.6
112ref|NM_001804.1| Homo sapiens caudal type homeobox transcription... 40 7.6
113gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 ... 40 7.6
114gb|U15212.1|HSU15212 Human caudal-type homeobox protein (CDX1) m... 40 7.6
115gb|AF086129.1|HUMZA83B04 Homo sapiens full length insert cDNA cl... 40 7.6
116emb|AL591977.1| Listeria monocytogenes strain EGD, complete geno... 40 7.6
117emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, co... 40 7.6
118gb|BC078665.1| Homo sapiens GRIP and coiled-coil domain containi... 40 7.6
119gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete ge... 40 7.6
120emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chr... 40 7.6
121gb|U16360.1|HSU16360 Human caudal-type homeobox protein (CDX1) g... 40 7.6 
>ref|XM_475752.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1173

 Score =  303 bits (153), Expect = 3e-79
 Identities = 277/317 (87%), Gaps = 6/317 (1%)
 Strand = Plus / Minus

                                                                        
Query: 244  ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 303
            ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 1082 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 1026

                                                                        
Query: 304  tctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcacgctcttca 363
            ||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1025 tctccttcagctggttttaggaactcgttgatgctcacagacttcttagcacgctcatca 966

                                                                        
Query: 364  cgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttgatgaaaacc 423
            ||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||| 
Sbjct: 965  cgttcagcattttctttcttcttcaaagcatccttgtcagatcccagtttgatgaaaact 906

                                                                        
Query: 424  tcatcatttcctttcttggtggaaagtagttgcatagcctgaagatccttatcaatttcg 483
            ||||||||| |||||||  |||||||| ||||||||| ||  | |||||| |||||||| 
Sbjct: 905  tcatcattttctttcttattggaaagtggttgcatagacttcaaatccttgtcaatttca 846

                                                                        
Query: 484  accttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcctccattact 543
            ||||||||||||||||   ||||||||| |  |||||||||||||||||||||| ||| |
Sbjct: 845  accttcctctcttcag---tcttcaaagaaagaagtgctttcctcttctcctcccttaat 789

                             
Query: 544  ttctcaaattcatcaag 560
            |||||||| || |||||
Sbjct: 788  ttctcaaactcctcaag 772
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>dbj|AK067806.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119G19, full
           insert sequence
          Length = 1091

 Score =  295 bits (149), Expect = 8e-77
 Identities = 276/317 (87%), Gaps = 6/317 (1%)
 Strand = Plus / Minus

                                                                       
Query: 244 ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 303
           ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 773 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 717

                                                                       
Query: 304 tctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcacgctcttca 363
           ||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 716 tctccttcagctggttttaggaactcgttgatgctcacagacttcttagcacgctcatca 657

                                                                       
Query: 364 cgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttgatgaaaacc 423
           ||||||||||| ||||||||||||||||| ||||| ||||  ||||||||||||||||| 
Sbjct: 656 cgttcagcattttctttcttcttcaaagcatccttgtcagatcccagtttgatgaaaact 597

                                                                       
Query: 424 tcatcatttcctttcttggtggaaagtagttgcatagcctgaagatccttatcaatttcg 483
           ||||||||| |||||||  |||||||| ||||||||| ||  | ||| || |||||||| 
Sbjct: 596 tcatcattttctttcttattggaaagtggttgcatagacttcaaatctttgtcaatttca 537

                                                                       
Query: 484 accttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcctccattact 543
           ||||||||||||||||   ||||||||| |  |||||||||||||||||||||| ||| |
Sbjct: 536 accttcctctcttcag---tcttcaaagaaagaagtgctttcctcttctcctcccttaat 480

                            
Query: 544 ttctcaaattcatcaag 560
           |||||||| || |||||
Sbjct: 479 ttctcaaactcctcaag 463
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>gb|BT016648.1| Zea mays clone Contig481 mRNA sequence
          Length = 1556

 Score =  182 bits (92), Expect = 8e-43
 Identities = 263/319 (82%), Gaps = 12/319 (3%)
 Strand = Plus / Minus

                                                                        
Query: 236  atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 295
            |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 1236 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 1180

                                                                        
Query: 296  agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 355
            || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 1179 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 1120

                                                                        
Query: 356  gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 415
            |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 1119 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 1066

                                                                        
Query: 416  tgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatccttat 475
            ||||||| ||||||||| |||||||| | |||||| | |||| || ||| | |||||| |
Sbjct: 1065 tgaaaacttcatcattttctttcttgtttgaaagtggctgcagagactgcaaatccttgt 1006

                                                                        
Query: 476  caatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcct 535
            ||| ||| || |||||||| ||||    |||||| |||   |||||||||||||||||||
Sbjct: 1005 caacttcaactttcctctcctcag---ccttcaatgcaagtagtgctttcctcttctcct 949

                               
Query: 536  ccattactttctcaaattc 554
            |  ||| ||||||||||||
Sbjct: 948  ctcttattttctcaaattc 930
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>gb|AY103606.1| Zea mays PCO150737 mRNA sequence
          Length = 1811

 Score =  182 bits (92), Expect = 8e-43
 Identities = 263/319 (82%), Gaps = 12/319 (3%)
 Strand = Plus / Minus

                                                                        
Query: 236  atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 295
            |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 1473 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 1417

                                                                        
Query: 296  agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 355
            || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 1416 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 1357

                                                                        
Query: 356  gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 415
            |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 1356 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 1303

                                                                        
Query: 416  tgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatccttat 475
            ||||||| ||||||||| |||||||| | |||||| | |||| || ||| | |||||| |
Sbjct: 1302 tgaaaacttcatcattttctttcttgtttgaaagtggctgcagagactgcaaatccttgt 1243

                                                                        
Query: 476  caatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcct 535
            ||| ||| || |||||||| ||||    |||||| |||   |||||||||||||||||||
Sbjct: 1242 caacttcaactttcctctcctcag---ccttcaatgcaagtagtgctttcctcttctcct 1186

                               
Query: 536  ccattactttctcaaattc 554
            |  ||| ||||||||||||
Sbjct: 1185 ctcttattttctcaaattc 1167
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>gb|BT019307.1| Zea mays clone Contig980.F mRNA sequence
          Length = 869

 Score =  174 bits (88), Expect = 2e-40
 Identities = 262/319 (82%), Gaps = 12/319 (3%)
 Strand = Plus / Minus

                                                                       
Query: 236 atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 295
           |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 572 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 516

                                                                       
Query: 296 agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 355
           || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 515 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 456

                                                                       
Query: 356 gctcttcacgttcagcattctctttcttcttcaaagcctccttatcagcacccagtttga 415
           |||| ||||| |||||||| || ||||||||       ||||| |||| |||||| || |
Sbjct: 455 gctcatcacgctcagcattttccttcttctt------atccttgtcagaacccagcttaa 402

                                                                       
Query: 416 tgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatccttat 475
           ||||||| ||||||||| |||||||| | |||||| | |||| ||   | |||||||| |
Sbjct: 401 tgaaaacttcatcattttctttcttgtttgaaagtggctgcagagaacgcagatccttgt 342

                                                                       
Query: 476 caatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcct 535
           ||| ||| || |||||||| ||||    |||||| |||   |||||||||||||||||||
Sbjct: 341 caacttcaactttcctctcctcag---ccttcaacgcaagtagtgctttcctcttctcct 285

                              
Query: 536 ccattactttctcaaattc 554
           |  ||| ||||||||||||
Sbjct: 284 ctcttattttctcaaattc 266
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>ref|NM_191814.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score =  172 bits (87), Expect = 8e-40
 Identities = 235/284 (82%), Gaps = 9/284 (3%)
 Strand = Plus / Minus

                                                                        
Query: 277  ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 336
            ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1013 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 954

                                                                        
Query: 337  ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 396
            |||||||||||||| |||||||| || || |||||||| || ||||||||       |||
Sbjct: 953  ctcacagacttcttggcacgctcatcgcgctcagcattttccttcttctt------atcc 900

                                                                        
Query: 397  ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 456
            || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 899  ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 840

                                                                        
Query: 457  atagcctgaagatccttatcaatttcgaccttcctctcttcagacttcttcaaagcatca 516
            |||| ||| || |||||||| |  || ||||||||||||||||    ||| ||||||  |
Sbjct: 839  atagactgcaggtccttatcgacctcaaccttcctctcttcag---ccttgaaagcaaga 783

                                                        
Query: 517  agtgctttcctcttctcctccattactttctcaaattcatcaag 560
            || ||||||| ||| |||||| ||| ||||||||| || |||||
Sbjct: 782  agagctttccgcttttcctcccttaatttctcaaactcctcaag 739



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 156  cttcccaccgagggttgggaactg 179
            ||||||||| ||||||||||||||
Sbjct: 1131 cttcccaccaagggttgggaactg 1108
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>gb|AF113521.1|AF113521 Zea mays putative transcription factor mRNA sequence
          Length = 1212

 Score =  168 bits (85), Expect = 1e-38
 Identities = 263/320 (82%), Gaps = 13/320 (4%)
 Strand = Plus / Minus

                                                                       
Query: 236 atccgcctctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccat 295
           |||||||||| || || ||||||||||| |||||||| ||   |||||| ||||| || |
Sbjct: 943 atccgcctctaaaaccaccacgatccccacggccccttcc---acggccacggccgccgt 887

                                                                       
Query: 296 agaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagcac 355
           || ||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||
Sbjct: 886 agtacctttctccttcagcaggtttcaggaactcgttgatgctcaccgacttcttggcac 827

                                                                       
Query: 356 gctcttcacgttc-agcattctctttcttcttcaaagcctccttatcagcacccagtttg 414
           |||| ||||| || |||||| || ||||||||       ||||| |||| |||||| || 
Sbjct: 826 gctcatcacgctcaagcattttccttcttctt------atccttgtcagaacccagctta 773

                                                                       
Query: 415 atgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatcctta 474
           |||||||| ||||||||| |||||||| | |||||| | |||| || ||| | |||||| 
Sbjct: 772 atgaaaacttcatcattttctttcttgtttgaaagtggctgcagagactgcaaatccttg 713

                                                                       
Query: 475 tcaatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcc 534
           |||| ||| || |||||||| ||||    |||||| |||   ||||||||||||||||||
Sbjct: 712 tcaacttcaactttcctctcctcag---ccttcaatgcaagtagtgctttcctcttctcc 656

                               
Query: 535 tccattactttctcaaattc 554
           ||  ||| ||||||||||||
Sbjct: 655 tctcttattttctcaaattc 636
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>dbj|AK059581.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-B03, full
           insert sequence
          Length = 501

 Score =  167 bits (84), Expect = 5e-38
 Identities = 188/223 (84%), Gaps = 6/223 (2%)
 Strand = Plus / Minus

                                                                       
Query: 277 ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 336
           ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 229 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 170

                                                                       
Query: 337 ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 396
           |||||||||||||| |||||||| || || |||||||| || ||||||||       |||
Sbjct: 169 ctcacagacttcttggcacgctcatcgcgctcagcattttccttcttctt------atcc 116

                                                                       
Query: 397 ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 456
           || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 115 ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 56

                                                      
Query: 457 atagcctgaagatccttatcaatttcgaccttcctctcttcag 499
           |||| ||| || |||||||| |  || ||||||||||||||||
Sbjct: 55  atagactgcaggtccttatcgacctcaaccttcctctcttcag 13



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 156 cttcccaccgagggttgggaactg 179
           ||||||||| ||||||||||||||
Sbjct: 347 cttcccaccaagggttgggaactg 324
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>dbj|AK121001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044L15, full
            insert sequence
          Length = 1611

 Score =  165 bits (83), Expect = 2e-37
 Identities = 234/284 (82%), Gaps = 9/284 (3%)
 Strand = Plus / Minus

                                                                        
Query: 277  ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 336
            ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 1249 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 1190

                                                                        
Query: 337  ctcacagacttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctcc 396
            |||||||||||||| |||||||| || || |||||||| ||  |||||||       |||
Sbjct: 1189 ctcacagacttcttggcacgctcatcgcgctcagcattttccctcttctt------atcc 1136

                                                                        
Query: 397  ttatcagcacccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgc 456
            || |||| |||||| || |||||||  |||||||||||||||||||| |||||| | |||
Sbjct: 1135 ttgtcagaacccagcttaatgaaaatttcatcatttcctttcttggtagaaagtggctgc 1076

                                                                        
Query: 457  atagcctgaagatccttatcaatttcgaccttcctctcttcagacttcttcaaagcatca 516
            |||| ||| || |||||||| |  || ||||||||||||||||    ||| ||||||  |
Sbjct: 1075 atagactgcaggtccttatcgacctcaaccttcctctcttcag---ccttgaaagcaaga 1019

                                                        
Query: 517  agtgctttcctcttctcctccattactttctcaaattcatcaag 560
            || ||||||| ||| |||||| ||| ||||||||| || |||||
Sbjct: 1018 agagctttccgcttttcctcccttaatttctcaaactcctcaag 975



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 156  cttcccaccgagggttgggaactg 179
            ||||||||| ||||||||||||||
Sbjct: 1367 cttcccaccaagggttgggaactg 1344
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>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score =  135 bits (68), Expect = 2e-28
 Identities = 133/154 (86%), Gaps = 3/154 (1%)
 Strand = Plus / Minus

                                                                          
Query: 407    ccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaa 466
              |||||||||||||||| ||||||||| |||||||  |||||||| ||||||||| ||  |
Sbjct: 110563 ccagtttgatgaaaacttcatcattttctttcttattggaaagtggttgcatagacttca 110504

                                                                          
Query: 467    gatccttatcaatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcc 526
               |||||| |||||||| ||||||||||||||||   ||||||||| |  |||||||||||
Sbjct: 110503 aatccttgtcaatttcaaccttcctctcttcag---tcttcaaagaaagaagtgctttcc 110447

                                                
Query: 527    tcttctcctccattactttctcaaattcatcaag 560
              ||||||||||| ||| ||||||||| || |||||
Sbjct: 110446 tcttctcctcccttaatttctcaaactcctcaag 110413



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                          
Query: 244    ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 303
              ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 111137 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 111081

                                                         
Query: 304    tctccttcagcaggcttcaggaactcgttgatgctcacagact 346
              ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 111080 tctccttcagctggttttaggaactcgttgatgctcacagact 111038



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                         
Query: 345    cttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctccttatcag 403
              ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 110709 cttcttagcacgctcatcacgttcagcattttctttcttcttcaaagcatccttgtcag 110651
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 2e-28
 Identities = 133/154 (86%), Gaps = 3/154 (1%)
 Strand = Plus / Minus

                                                                            
Query: 407      ccagtttgatgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaa 466
                |||||||||||||||| ||||||||| |||||||  |||||||| ||||||||| ||  |
Sbjct: 26259515 ccagtttgatgaaaacttcatcattttctttcttattggaaagtggttgcatagacttca 26259456

                                                                            
Query: 467      gatccttatcaatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcc 526
                 |||||| |||||||| ||||||||||||||||   ||||||||| |  |||||||||||
Sbjct: 26259455 aatccttgtcaatttcaaccttcctctcttcag---tcttcaaagaaagaagtgctttcc 26259399

                                                  
Query: 527      tcttctcctccattactttctcaaattcatcaag 560
                ||||||||||| ||| ||||||||| || |||||
Sbjct: 26259398 tcttctcctcccttaatttctcaaactcctcaag 26259365



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 90/103 (87%), Gaps = 3/103 (2%)
 Strand = Plus / Minus

                                                                            
Query: 244      ctgaagcctccacgatccccgcggcccctgccgccacggcctcggccaccatagaacctt 303
                ||||| || |||||||||||||||||||||||   ||| || ||||| |||||| |||| 
Sbjct: 26260089 ctgaaaccgccacgatccccgcggcccctgcc---acgaccacggccgccatagtacctc 26260033

                                                           
Query: 304      tctccttcagcaggcttcaggaactcgttgatgctcacagact 346
                ||||||||||| || || |||||||||||||||||||||||||
Sbjct: 26260032 tctccttcagctggttttaggaactcgttgatgctcacagact 26259990



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 345      cttcttagcacgctcttcacgttcagcattctctttcttcttcaaagcctccttatcag 403
                ||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||
Sbjct: 26259661 cttcttagcacgctcatcacgttcagcattttctttcttcttcaaagcatccttgtcag 26259603



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                          
Query: 299      acctttctccttcagcaggcttcaggaactcgttgatgctca 340
                |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 29138394 acctctctccttcagccggcttcaagaattcattgatgctca 29138353
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                            
Query: 277      ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 336
                ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 30089040 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 30089099

                          
Query: 337      ctcacagact 346
                ||||||||||
Sbjct: 30089100 ctcacagact 30089109



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 120/146 (82%), Gaps = 3/146 (2%)
 Strand = Plus / Plus

                                                                            
Query: 415      atgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatcctta 474
                |||||||  |||||||||||||||||||| |||||| | ||||||| ||| || ||||||
Sbjct: 30089570 atgaaaatttcatcatttcctttcttggtagaaagtggctgcatagactgcaggtcctta 30089629

                                                                            
Query: 475      tcaatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcc 534
                || |  || ||||||||||||||||    ||| ||||||  ||| ||||||| ||| |||
Sbjct: 30089630 tcgacctcaaccttcctctcttcag---ccttgaaagcaagaagagctttccgcttttcc 30089686

                                          
Query: 535      tccattactttctcaaattcatcaag 560
                ||| ||| ||||||||| || |||||
Sbjct: 30089687 tcccttaatttctcaaactcctcaag 30089712



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 520      gctttcctcttctcctccattactttctcaaattc 554
                ||||||||||||||||||| |||||||||| ||||
Sbjct: 23737706 gctttcctcttctcctccagtactttctcatattc 23737740



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 301      ctttctccttcagcaggcttcaggaactcgttgatgct 338
                ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 23737335 ctttcaccttcagccggcttcaggaattcattgatgct 23737372



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 156      cttcccaccgagggttgggaactg 179
                ||||||||| ||||||||||||||
Sbjct: 30088922 cttcccaccaagggttgggaactg 30088945
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>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                         
Query: 277   ccacggcctcggccaccatagaacctttctccttcagcaggcttcaggaactcgttgatg 336
             ||||| || ||||| |||||| ||||||||||||| ||||||||||||||||| ||||||
Sbjct: 85030 ccacgaccacggccgccatagtacctttctccttccgcaggcttcaggaactcattgatg 85089

                       
Query: 337   ctcacagact 346
             ||||||||||
Sbjct: 85090 ctcacagact 85099



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 120/146 (82%), Gaps = 3/146 (2%)
 Strand = Plus / Plus

                                                                         
Query: 415   atgaaaacctcatcatttcctttcttggtggaaagtagttgcatagcctgaagatcctta 474
             |||||||  |||||||||||||||||||| |||||| | ||||||| ||| || ||||||
Sbjct: 85560 atgaaaatttcatcatttcctttcttggtagaaagtggctgcatagactgcaggtcctta 85619

                                                                         
Query: 475   tcaatttcgaccttcctctcttcagacttcttcaaagcatcaagtgctttcctcttctcc 534
             || |  || ||||||||||||||||    ||| ||||||  ||| ||||||| ||| |||
Sbjct: 85620 tcgacctcaaccttcctctcttcag---ccttgaaagcaagaagagctttccgcttttcc 85676

                                       
Query: 535   tccattactttctcaaattcatcaag 560
             ||| ||| ||||||||| || |||||
Sbjct: 85677 tcccttaatttctcaaactcctcaag 85702



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 156   cttcccaccgagggttgggaactg 179
             ||||||||| ||||||||||||||
Sbjct: 84912 cttcccaccaagggttgggaactg 84935
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>gb|AY104818.1| Zea mays PCO063451 mRNA sequence
          Length = 1163

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                       
Query: 294 atagaacctttctccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 353
           |||| ||||||| |||||||| ||||||| |||||||||||||||||  ||||||||  |
Sbjct: 665 atagtacctttcgccttcagctggcttcaagaactcgttgatgctcagggacttcttgcc 606

                                               
Query: 354 acgctcttcacgttcagcattctctttcttcttcaa 389
            || ||||| | ||||||| | |||||||| |||||
Sbjct: 605 ccgttcttctctttcagcactttctttctttttcaa 570
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>dbj|AB236828.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete
            cds, clone: C2403
          Length = 1546

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 307  ccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 353
            |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 1146 ccttcagctggcttcagaaactcattgatgctcacagacttcttagc 1100
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>dbj|AB236752.1| Trifolium pratense RNA for putative nuclear antigen homolog, complete
            cds, clone: C1477
          Length = 1535

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                           
Query: 307  ccttcagcaggcttcaggaactcgttgatgctcacagacttcttagc 353
            |||||||| |||||||| ||||| |||||||||||||||||||||||
Sbjct: 1125 ccttcagctggcttcagaaactcattgatgctcacagacttcttagc 1079
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>gb|AF110226.1| Nicotiana tabacum nuclear RNA binding protein (RggA) mRNA, partial
           cds
          Length = 1150

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                
Query: 302 tttctccttcagcaggcttcaggaactcgttgatgct 338
           |||||||||| |||||||||||||||||||| |||||
Sbjct: 761 tttctccttctgcaggcttcaggaactcgtttatgct 725
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>gb|AF110230.1| Spinacia oleracea nuclear RNA binding protein C (RggC) mRNA,
           partial cds
          Length = 890

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 307 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 350
           |||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 608 ccttcagcgggcttcagaaactcgttaatgctgacagacttctt 565
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>gb|AF110229.1| Spinacia oleracea nuclear RNA binding protein B (RggB) mRNA,
           partial cds
          Length = 925

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 307 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 350
           |||||||| |||||||| |||||||| ||||| |||||||||||
Sbjct: 576 ccttcagcgggcttcagaaactcgttaatgctgacagacttctt 533
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>ref|NM_192656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 520 gctttcctcttctcctccattactttctcaaattc 554
           ||||||||||||||||||| |||||||||| ||||
Sbjct: 701 gctttcctcttctcctccagtactttctcatattc 667



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 301 ctttctccttcagcaggcttcaggaactcgttgatgctcacagacttc 348
           ||||| |||||||| ||||||||||| || |||||||| | |||||||
Sbjct: 911 ctttcaccttcagccggcttcaggaattcattgatgctaagagacttc 864
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>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1085F01
          Length = 163671

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 520    gctttcctcttctcctccattactttctcaaattc 554
              ||||||||||||||||||| |||||||||| ||||
Sbjct: 115410 gctttcctcttctcctccagtactttctcatattc 115444



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 301    ctttctccttcagcaggcttcaggaactcgttgatgct 338
              ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 115039 ctttcaccttcagccggcttcaggaattcattgatgct 115076
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 520   gctttcctcttctcctccattactttctcaaattc 554
             ||||||||||||||||||| |||||||||| ||||
Sbjct: 18291 gctttcctcttctcctccagtactttctcatattc 18325



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 301   ctttctccttcagcaggcttcaggaactcgttgatgct 338
             ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 17920 ctttcaccttcagccggcttcaggaattcattgatgct 17957
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>dbj|AK065107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N19, full
            insert sequence
          Length = 1556

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 520  gctttcctcttctcctccattactttctcaaattc 554
            ||||||||||||||||||| |||||||||| ||||
Sbjct: 1001 gctttcctcttctcctccagtactttctcatattc 967



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 301  ctttctccttcagcaggcttcaggaactcgttgatgctcacagacttc 348
            ||||| |||||||| ||||||||||| || |||||||| | |||||||
Sbjct: 1211 ctttcaccttcagccggcttcaggaattcattgatgctaagagacttc 1164
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>ref|NM_117785.2| Arabidopsis thaliana RNA binding AT4G16830 mRNA, complete cds
          Length = 1536

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 316  ggcttcaggaactcgttgatgctcacagacttcttagc 353
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1090 ggcttcagaaactcattgatgctcacagccttcttagc 1053
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>gb|DQ207876.1| Solanum tuberosum clone 092B12 nuclear RNA binding protein-like mRNA,
            complete cds
          Length = 1480

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 301  ctttctccttcagcaggcttcaggaactcgttgatgct 338
            |||||||| |||||||||||||| |||||||| |||||
Sbjct: 1137 ctttctccctcagcaggcttcagaaactcgtttatgct 1100
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>gb|BT000559.1| Arabidopsis thaliana nuclear antigen homolog  (At4g16830/dl4440w)
           mRNA, complete cds
          Length = 1068

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 316 ggcttcaggaactcgttgatgctcacagacttcttagc 353
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 908 ggcttcagaaactcattgatgctcacagccttcttagc 871
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>gb|AY096500.1| Arabidopsis thaliana putative nuclear antigen-like protein
           (At4g16830) mRNA, complete cds
          Length = 1099

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 316 ggcttcaggaactcgttgatgctcacagacttcttagc 353
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 908 ggcttcagaaactcattgatgctcacagccttcttagc 871
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>gb|AY063896.1| Arabidopsis thaliana putative nuclear antigen homolog (At4g16830)
            mRNA, complete cds
          Length = 1443

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 316  ggcttcaggaactcgttgatgctcacagacttcttagc 353
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1064 ggcttcagaaactcattgatgctcacagccttcttagc 1027
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>gb|AY127018.1| Arabidopsis thaliana AT4g16830/dl4440w mRNA, complete cds
          Length = 1431

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 316  ggcttcaggaactcgttgatgctcacagacttcttagc 353
            |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 1071 ggcttcagaaactcattgatgctcacagccttcttagc 1034
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>emb|BX827515.1|CNS0A2VZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS68ZE03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1287

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 316 ggcttcaggaactcgttgatgctcacagacttcttagc 353
           |||||||| ||||| ||||||||||||| |||||||||
Sbjct: 906 ggcttcagaaactcattgatgctcacagccttcttagc 869
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>dbj|AB236845.1| Trifolium pratense RNA for hypothetical protein, complete cds, clone:
            C461
          Length = 1552

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 304  tctccttcagcaggcttcaggaactcgttgatgctca 340
            |||||||||||||||||||| ||||| || |||||||
Sbjct: 1145 tctccttcagcaggcttcagaaactcattaatgctca 1109
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>emb|AJ313093.1|BVU313093 Beta vulgaris mRNA for salt tolerance protein 2 (sato2 gene)
          Length = 1071

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 394 tccttatcagcacccagtttgatgaaaacctcatcat 430
           |||||||||| |||||| || ||||||||||||||||
Sbjct: 854 tccttatcagaacccagctttatgaaaacctcatcat 818



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 313 gcaggcttcaggaactcgttgatgctcacagacttctt 350
           |||||||| || || || ||||||||||||||||||||
Sbjct: 929 gcaggcttaagaaattcattgatgctcacagacttctt 892
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>ref|XM_476001.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1152

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 299  acctttctccttcagcaggcttcaggaactcgttgatgctcacagacttctt 350
            |||| ||||||||||| ||||||| ||| || ||||||||||  ||||||||
Sbjct: 1000 acctctctccttcagccggcttcaagaattcattgatgctcagggacttctt 949
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>emb|AJ313092.1|BVU313092 Beta vulgaris mRNA for salt tolerance protein 1 (sato1 gene)
          Length = 1300

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 307 ccttcagcaggcttcaggaactcgttgatgctcacagacttctt 350
           ||||||||||||||||| || || || ||||| |||||||||||
Sbjct: 982 ccttcagcaggcttcagaaattcattaatgctgacagacttctt 939
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>dbj|AK073438.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L01, full
            insert sequence
          Length = 1699

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 299  acctttctccttcagcaggcttcaggaactcgttgatgctcacagacttctt 350
            |||| ||||||||||| ||||||| ||| || ||||||||||  ||||||||
Sbjct: 1224 acctctctccttcagccggcttcaagaattcattgatgctcagggacttctt 1173
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>gb|AY084828.1| Arabidopsis thaliana clone 118826 mRNA, complete sequence
          Length = 1474

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 319  ttcaggaactcgttgatgctcacagacttcttagc 353
            ||||| ||||| ||||||||||||| |||||||||
Sbjct: 1064 ttcagaaactcattgatgctcacagccttcttagc 1030
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>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0022J22, complete sequence
          Length = 142854

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 299   acctttctccttcagcaggcttcaggaactcgttgatgctca 340
             |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 21853 acctctctccttcagccggcttcaagaattcattgatgctca 21812
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>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
             complete sequence
          Length = 100800

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 299   acctttctccttcagcaggcttcaggaactcgttgatgctca 340
             |||| ||||||||||| ||||||| ||| || ||||||||||
Sbjct: 64618 acctctctccttcagccggcttcaagaattcattgatgctca 64577
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>ref|XM_822401.1| Trypanosoma brucei TREU927 ATP-dependent DEAD/H RNA helicase
           (Tb09.211.3510) partial mRNA
          Length = 2208

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 262 ccgcggcccctgccgccacggcctcg 287
           ||||| ||||||||||||||||||||
Sbjct: 260 ccgcgacccctgccgccacggcctcg 235
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>ref|XM_213983.3| PREDICTED: Rattus norvegicus similar to KIAA1078 protein (predicted)
            (LOC289400), mRNA
          Length = 6845

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 519  tgctttcctcttctcctccatt 540
            ||||||||||||||||||||||
Sbjct: 1505 tgctttcctcttctcctccatt 1484
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>gb|AC140111.3| Mus musculus BAC clone RP23-16F4 from 12, complete sequence
          Length = 175729

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 373    ttctctttcttcttcaaagcctcctt 398
              ||||||||||||||||| ||||||||
Sbjct: 153024 ttctctttcttcttcaacgcctcctt 153049
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>gb|AC126269.3| Mus musculus BAC clone RP23-230D6 from 12, complete sequence
          Length = 184181

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 373   ttctctttcttcttcaaagcctcctt 398
             ||||||||||||||||| ||||||||
Sbjct: 15113 ttctctttcttcttcaacgcctcctt 15138
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>emb|AJ007041.1|HSA7041 Homo sapiens mRNA for trithorax homologue 2
          Length = 8469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 262 ccgcggcccctgccgccacggcctc 286
           |||||||||||||| ||||||||||
Sbjct: 887 ccgcggcccctgcctccacggcctc 863
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>emb|AL603650.10| Human DNA sequence from clone RP11-263F14 on chromosome 9 Contains the
             3'end of COL5A1 for collagen (type V) alpha 1,a pseudogene
             similar to part of a ficolin family protein and the FCN2
             gene for ficolin (collagen/fibrinogen domain containing
             lectin) 2 (hucolin), complete sequence
          Length = 131466

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   ttgataaaggggtggtactcg 136
             |||||||||||||||||||||
Sbjct: 98201 ttgataaaggggtggtactcg 98181
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>gb|AF042797.2| Takifugu rubripes FRG1 (FRG1), N-acylsphingosine amidohydrolase (ASAH),
             PCM1 (PCM1), squamous cell carcinoma antigen recognised by
             cytotoxic T lymphocytes (SART1), oxysterol binding protein
             1 (OSBP1), and caspase 3 (CASP3) genes, complete cds
          Length = 42616

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   cgccacggcctcggccaccat 295
             |||||||||||||||||||||
Sbjct: 30130 cgccacggcctcggccaccat 30150
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>gb|AD000671.1| Homo sapiens DNA from chromosome 19-cosmid f24109 containing HRX2,
             genomic sequence
          Length = 46251

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 262   ccgcggcccctgccgccacggcctc 286
             |||||||||||||| ||||||||||
Sbjct: 15745 ccgcggcccctgcctccacggcctc 15721
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>gb|AF292120.1|AF292120 Takifugu rubripes clone 16-k18 squamous-cell carcinoma
           T-cell-recognized antigen (SART1) mRNA, partial cds
          Length = 1583

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 275 cgccacggcctcggccaccat 295
           |||||||||||||||||||||
Sbjct: 900 cgccacggcctcggccaccat 920
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>gb|AF292119.1|AF292119 Takifugu rubripes clone 16-i12 squamous-cell carcinoma
           T-cell-recognized antigen (SART1) mRNA, partial cds
          Length = 1318

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 275 cgccacggcctcggccaccat 295
           |||||||||||||||||||||
Sbjct: 635 cgccacggcctcggccaccat 655
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>ref|NM_058707.3| Caenorhabditis elegans LiPid Depleted family member (lpd-6) (lpd-6)
            mRNA, complete cds
          Length = 1824

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 241  cctctgaagcctccacgatccccgc 265
            |||||||||||||||||||| ||||
Sbjct: 1430 cctctgaagcctccacgatctccgc 1406
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>ref|NM_014727.1| Homo sapiens myeloid/lymphoid or mixed-lineage leukemia 4 (MLL4),
           mRNA
          Length = 8469

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 262 ccgcggcccctgccgccacggcctc 286
           |||||||||||||| ||||||||||
Sbjct: 887 ccgcggcccctgcctccacggcctc 863
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>gb|AF186605.1|AF186605 Homo sapiens MLL2 protein mRNA, partial cds
          Length = 8140

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 262 ccgcggcccctgccgccacggcctc 286
           |||||||||||||| ||||||||||
Sbjct: 559 ccgcggcccctgcctccacggcctc 535
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>gb|AF043700.1| Caenorhabditis elegans cosmid K09H9, complete sequence
          Length = 37881

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 241   cctctgaagcctccacgatccccgc 265
             |||||||||||||||||||| ||||
Sbjct: 22913 cctctgaagcctccacgatctccgc 22937
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>emb|AL824705.5| Mouse DNA sequence from clone RP23-102G9 on chromosome 4, complete
             sequence
          Length = 144458

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   tcctcttctcctccattactt 544
             |||||||||||||||||||||
Sbjct: 79813 tcctcttctcctccattactt 79793
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>gb|BC011812.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12, mRNA (cDNA
            clone IMAGE:3051349), partial cds
          Length = 2079

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cccgcggcccctgccgccac 280
            ||||||||||||||||||||
Sbjct: 1364 cccgcggcccctgccgccac 1345
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 255     acgatccccgcggcccctgccgccacggcctc 286
               |||||| ||||||||||||| ||||| |||||
Sbjct: 1967929 acgatctccgcggcccctgcggccactgcctc 1967960
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>ref|XM_519350.1| PREDICTED: Pan troglodytes similar to GRIP and coiled-coil
           domain-containing protein 1 (Golgi coiled coil protein
           1) (LOC463697), mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 148 ctttctccttcagcaggctt 129
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>ref|XM_527071.1| PREDICTED: Pan troglodytes similar to Homeobox protein CDX-1
           (Caudal-type homeobox protein 1) (LOC471693), mRNA
          Length = 798

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 237 ccccgcggcccctgccgcca 256
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>ref|NM_028900.2| Mus musculus golgi coiled coil 1 (Gcc1), mRNA
          Length = 4051

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 556 ctttctccttcagcaggctt 537
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>gb|AY016021.1| Mus musculus clone 03245 alpha globin gene cluster, complete sequence
          Length = 183192

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   cctccacgatccccgcggcc 269
             ||||||||||||||||||||
Sbjct: 24852 cctccacgatccccgcggcc 24833
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>gb|BC066807.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone MGC:76506
           IMAGE:30101518), complete cds
          Length = 4048

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 525 ctttctccttcagcaggctt 506
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>gb|BC081184.1| Xenopus laevis MGC84407 protein, mRNA (cDNA clone MGC:84407
            IMAGE:7019024), complete cds
          Length = 3852

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tgctttcctcttctcctcca 538
            ||||||||||||||||||||
Sbjct: 1189 tgctttcctcttctcctcca 1170
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>ref|XM_953913.1| Neurospora crassa OR74A hypothetical protein (NCU08978.1) partial
            mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 226  ccgccaccgaatccgcctct 245
            ||||||||||||||||||||
Sbjct: 1703 ccgccaccgaatccgcctct 1722
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>ref|XM_331369.1| Neurospora crassa OR74A hypothetical protein (NCU08978.1) partial
            mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 226  ccgccaccgaatccgcctct 245
            ||||||||||||||||||||
Sbjct: 1703 ccgccaccgaatccgcctct 1722
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>gb|AC068608.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-434O14, complete
             sequence
          Length = 191358

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   ctttctccttcagcaggctt 320
             ||||||||||||||||||||
Sbjct: 56571 ctttctccttcagcaggctt 56590
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>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 419  aaacctcatcatttcctttcttgg 442
            |||||||||||||||||| |||||
Sbjct: 3296 aaacctcatcatttccttccttgg 3273
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>gb|BC059616.1| Danio rerio hypothetical protein LOC402878, mRNA (cDNA clone
            IMAGE:4786972), partial cds
          Length = 1217

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tgctttcctcttctcctcca 538
            ||||||||||||||||||||
Sbjct: 1145 tgctttcctcttctcctcca 1126
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>gb|AC147243.2| Mus musculus BAC clone RP23-444P22 from chromosome 6, complete sequence
          Length = 181025

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    ctttcctcttctcctccatt 540
              ||||||||||||||||||||
Sbjct: 131192 ctttcctcttctcctccatt 131173
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>gb|AC125175.4| Mus musculus BAC clone RP24-572I8 from chromosome 6, complete
            sequence
          Length = 167991

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 521  ctttcctcttctcctccatt 540
            ||||||||||||||||||||
Sbjct: 2047 ctttcctcttctcctccatt 2028
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>gb|AC004932.4| Homo sapiens PAC clone RP5-943F2 from 7, complete sequence
          Length = 151183

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    ctttcctcttctcctccatt 540
              ||||||||||||||||||||
Sbjct: 119102 ctttcctcttctcctccatt 119121
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>gb|AY710267.1| Banana virus X RNA-dependent RNA polymerase gene, partial cds; and
            triple gene block protein 1, triple gene block protein 2,
            triple gene block protein 3, and capsid protein genes,
            complete cds
          Length = 2917

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 428  catttcctttcttggtggaa 447
            ||||||||||||||||||||
Sbjct: 2183 catttcctttcttggtggaa 2164
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>gb|BC021462.1| Mus musculus golgi coiled coil 1, mRNA (cDNA clone IMAGE:5054618),
           complete cds
          Length = 1363

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 416 ctttctccttcagcaggctt 397
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>ref|XM_792752.1| PREDICTED: Strongylocentrotus purpuratus similar to deleted in
           malignant brain tumors 1 isoform b precursor
           (LOC593270), mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 502 ttcttcaaagcatcaagtgc 521
           ||||||||||||||||||||
Sbjct: 334 ttcttcaaagcatcaagtgc 353
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>ref|XM_780125.1| PREDICTED: Strongylocentrotus purpuratus similar to translocation
           protein 1 (LOC580046), partial mRNA
          Length = 495

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 tcagcattctctttcttctt 386
           ||||||||||||||||||||
Sbjct: 47  tcagcattctctttcttctt 28
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>emb|Z97342.2|ATFCA7 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 7
          Length = 201471

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   ggcttcaggaactcgttgatgctcacag 343
             |||||||| ||||| |||||||||||||
Sbjct: 35010 ggcttcagaaactcattgatgctcacag 34983
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>emb|CR859994.1| Pongo pygmaeus mRNA; cDNA DKFZp459H158 (from clone DKFZp459H158)
          Length = 4144

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 561 ctttctccttcagcaggctt 542
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>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29
          Length = 309050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    ccccgcggcccctgccgcca 279
              ||||||||||||||||||||
Sbjct: 114438 ccccgcggcccctgccgcca 114419
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>emb|AL161545.2|ATCHRIV45 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 45
          Length = 199548

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   ggcttcaggaactcgttgatgctcacag 343
             |||||||| ||||| |||||||||||||
Sbjct: 20839 ggcttcagaaactcattgatgctcacag 20812
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>gb|AC164623.4| Mus musculus 10 BAC RP24-401L24 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172657

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    tccattactttctcaaattc 554
              ||||||||||||||||||||
Sbjct: 164539 tccattactttctcaaattc 164520
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>gb|BC014100.2| Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA
           clone MGC:20706 IMAGE:2988591), complete cds
          Length = 4153

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 566 ctttctccttcagcaggctt 547
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>emb|AL833358.1|HSM804671 Homo sapiens mRNA; cDNA DKFZp667D0214 (from clone DKFZp667D0214)
          Length = 2447

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 cccgcggcccctgccgccac 280
           ||||||||||||||||||||
Sbjct: 64  cccgcggcccctgccgccac 45
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>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 541  actttctcaaattcatcaag 560
            ||||||||||||||||||||
Sbjct: 2591 actttctcaaattcatcaag 2572
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>dbj|AK123129.1| Homo sapiens cDNA FLJ41134 fis, clone BRACE2027970
          Length = 2619

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cccgcggcccctgccgccac 280
            ||||||||||||||||||||
Sbjct: 2068 cccgcggcccctgccgccac 2049
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>dbj|AK092878.1| Homo sapiens cDNA FLJ35559 fis, clone SPLEN2005009
          Length = 3587

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 22  ctttctccttcagcaggctt 3
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>gb|AF110227.1| Arabidopsis thaliana nuclear RNA binding protein (RGGA) gene,
            complete cds
          Length = 1688

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 316  ggcttcaggaactcgttgatgctcacag 343
            |||||||| ||||| |||||||||||||
Sbjct: 1528 ggcttcagaaactcattgatgctcacag 1501
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>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence
          Length = 183101

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   acctcatcatttcctttctt 440
             ||||||||||||||||||||
Sbjct: 83656 acctcatcatttcctttctt 83637
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>gb|AC091769.6| Homo sapiens chromosome 10 clone RP11-205A8, complete sequence
          Length = 173450

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    cccgcggcccctgccgccac 280
              ||||||||||||||||||||
Sbjct: 156653 cccgcggcccctgccgccac 156634
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>gb|AC091785.5| Genomic sequence for Mus musculus, clone RP23-349P1, complete sequence
          Length = 178271

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 521    ctttcctcttctcctccatt 540
              ||||||||||||||||||||
Sbjct: 123829 ctttcctcttctcctccatt 123848
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>ref|NM_001002762.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily B, member 12 (DNAJB12),
            transcript variant 1, mRNA
          Length = 4342

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cccgcggcccctgccgccac 280
            ||||||||||||||||||||
Sbjct: 1957 cccgcggcccctgccgccac 1938
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>ref|NM_024523.5| Homo sapiens GRIP and coiled-coil domain containing 1 (GCC1), mRNA
          Length = 4152

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 566 ctttctccttcagcaggctt 547
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>ref|XM_691401.1| PREDICTED: Danio rerio hypothetical protein LOC402878 (LOC402878),
            mRNA
          Length = 1935

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tgctttcctcttctcctcca 538
            ||||||||||||||||||||
Sbjct: 1140 tgctttcctcttctcctcca 1121
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>gb|AC155322.5| Mus musculus 10 BAC RP24-149J3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 187016

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   tccattactttctcaaattc 554
             ||||||||||||||||||||
Sbjct: 71078 tccattactttctcaaattc 71059
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>dbj|AK016531.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4932417P04 product:golgi coiled coil 1,
           full insert sequence
          Length = 2860

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 505 ctttctccttcagcaggctt 486
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>dbj|AK032253.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430511O04 product:hypothetical
           GRIP domain containing protein, full insert sequence
          Length = 4051

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 556 ctttctccttcagcaggctt 537
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>gb|AC158634.5| Mus musculus 10 BAC RP23-424C16 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 169826

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   tccattactttctcaaattc 554
             ||||||||||||||||||||
Sbjct: 76869 tccattactttctcaaattc 76850
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 512     catcaagtgctttcctcttctcct 535
               |||||||| |||||||||||||||
Sbjct: 5218458 catcaagtcctttcctcttctcct 5218481
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>gb|U51095.1|HSU51095 Human homeobox protein Cdx1 mRNA, complete cds
          Length = 1699

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
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>gb|AC073065.6| Homo sapiens BAC clone RP11-149O3 from 2, complete sequence
          Length = 175345

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   tctctttcttcttcaaagcc 393
             ||||||||||||||||||||
Sbjct: 66973 tctctttcttcttcaaagcc 66954
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>gb|AF525417.1| Homo sapiens Golgi coiled coil protein 1 mRNA, complete cds
          Length = 2522

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 341 ctttctccttcagcaggctt 322
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>gb|AY087413.1| Arabidopsis thaliana clone 35156 mRNA, complete sequence
          Length = 1399

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 313  gcaggcttcaggaactcgttgatgctca 340
            ||||| ||||| ||||||||||||||||
Sbjct: 1014 gcaggtttcagaaactcgttgatgctca 987
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>ref|XM_575413.1| PREDICTED: Rattus norvegicus similar to GRIP and coiled-coil
           domain-containing protein 1 (Golgi coiled coil protein
           1) (LOC500058), mRNA
          Length = 3652

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 154 ctttctccttcagcaggctt 135
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>gb|AC020889.3|AC020889 Genomic sequence for Arabidopsis thaliana BAC T1N15 from chromosome I,
             complete sequence
          Length = 95295

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 529   ttctcctccattactttctcaaattcat 556
             ||||||||||||||||| ||||| ||||
Sbjct: 81065 ttctcctccattactttatcaaaatcat 81092
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>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016O19
          Length = 169120

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 512   catcaagtgctttcctcttctcct 535
             |||||||| |||||||||||||||
Sbjct: 85180 catcaagtcctttcctcttctcct 85203
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>gb|AF239666.1|AF239666 Homo sapiens CDX1 homeobox protein (CDX1) mRNA, complete cds
          Length = 942

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
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>dbj|AK025942.1| Homo sapiens cDNA: FLJ22289 fis, clone HRC04173
          Length = 2116

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  cccgcggcccctgccgccac 280
            ||||||||||||||||||||
Sbjct: 1444 cccgcggcccctgccgccac 1425
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>gb|AC000359.1|HSAC000359 Human cosmid g1572c264, complete sequence
          Length = 43394

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 559 ctttctccttcagcaggctt 578
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>gb|AC000357.1|HSAC000357 Human cosmid g1572c101, complete sequence
          Length = 45309

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   ctttctccttcagcaggctt 320
             ||||||||||||||||||||
Sbjct: 30623 ctttctccttcagcaggctt 30642
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>emb|AJ324296.1|HSA324296 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-DB14C
          Length = 759

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 330 ctttctccttcagcaggctt 311
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>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 419   aaacctcatcatttcctttcttgg 442
             |||||||||||||||||| |||||
Sbjct: 93474 aaacctcatcatttccttccttgg 93451
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>gb|AC145869.2| Pan troglodytes BAC clone RP43-39F14 from chromosome 7, complete sequence
          Length = 201977

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    ctttctccttcagcaggctt 320
              ||||||||||||||||||||
Sbjct: 103466 ctttctccttcagcaggctt 103485
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>dbj|D25417.1|ANGNPRB Anguilla japonica NPR-B mRNA for natriuretic peptide receptor B,
            complete cds
          Length = 3696

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 519  tgctttcctcttctcctcca 538
            ||||||||||||||||||||
Sbjct: 2524 tgctttcctcttctcctcca 2505
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>gb|AE000782.1| Archaeoglobus fulgidus DSM 4304, complete genome
          Length = 2178400

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 517     agtgctttcctcttctcctccattactttctc 548
               ||||| |||||||||||||| ||||| |||||
Sbjct: 1659898 agtgccttcctcttctcctcaattaccttctc 1659867
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>ref|NM_001804.1| Homo sapiens caudal type homeobox transcription factor 1 (CDX1),
           mRNA
          Length = 1699

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 318 ccccgcggcccctgccgcca 337
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>gb|AC005895.1|AC005895 Homo sapiens chromosome 5, Bac clone 5m9 (LBNL H220), complete sequence
          Length = 87857

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ccccgcggcccctgccgcca 279
             ||||||||||||||||||||
Sbjct: 35513 ccccgcggcccctgccgcca 35532
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>gb|U15212.1|HSU15212 Human caudal-type homeobox protein (CDX1) mRNA, partial cds
          Length = 1262

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 51  ccccgcggcccctgccgcca 70
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>gb|AF086129.1|HUMZA83B04 Homo sapiens full length insert cDNA clone ZA83B04
          Length = 488

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 167 ctttctccttcagcaggctt 186
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>emb|AL591977.1| Listeria monocytogenes strain EGD, complete genome, segment 5/12
          Length = 270050

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     cgcagaaatatatggtaatg 84
              ||||||||||||||||||||
Sbjct: 162831 cgcagaaatatatggtaatg 162850
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>emb|BX000429.7| Zebrafish DNA sequence from clone DKEY-77G18, complete sequence
          Length = 58683

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    cagaaatatatggtaatggc 86
             ||||||||||||||||||||
Sbjct: 22680 cagaaatatatggtaatggc 22699
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>gb|BC078665.1| Homo sapiens GRIP and coiled-coil domain containing 1, mRNA (cDNA
           clone MGC:88535 IMAGE:5923117), complete cds
          Length = 4108

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 301 ctttctccttcagcaggctt 320
           ||||||||||||||||||||
Sbjct: 518 ctttctccttcagcaggctt 499
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>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome
          Length = 2905187

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      cgcagaaatatatggtaatg 84
               ||||||||||||||||||||
Sbjct: 1053454 cgcagaaatatatggtaatg 1053473
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>emb|AL929446.5| Mouse DNA sequence from clone RP23-177M10 on chromosome 11, complete
             sequence
          Length = 118812

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   cctccacgatccccgcggcc 269
             ||||||||||||||||||||
Sbjct: 45469 cctccacgatccccgcggcc 45450
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>gb|U16360.1|HSU16360 Human caudal-type homeobox protein (CDX1) gene, partial cds
          Length = 613

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 ccccgcggcccctgccgcca 279
           ||||||||||||||||||||
Sbjct: 405 ccccgcggcccctgccgcca 424


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,930,790
Number of Sequences: 3902068
Number of extensions: 5930790
Number of successful extensions: 133980
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133528
Number of HSP's gapped (non-prelim): 438
length of query: 560
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 537
effective length of database: 17,143,297,704
effective search space: 9205950867048
effective search space used: 9205950867048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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