ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20l24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119958.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
2gb|AY107890.1| Zea mays PCO143404 mRNA sequence 145 1e-31
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4,... 105 1e-19
5ref|XM_472288.1| Oryza sativa (japonica cultivar-group), predic... 84 5e-13
6emb|CT010521.4| M.truncatula DNA sequence from clone MTH2-34D24 ... 56 1e-04
7gb|AC109778.8| Homo sapiens 3 BAC RP11-17O13 (Roswell Park Cance... 44 0.40
8gb|AC166099.2| Mus musculus BAC clone RP24-254H22 from chromosom... 44 0.40
9gb|AC166360.4| Mus musculus BAC clone RP24-497L5 from chromosome... 44 0.40
10emb|AL663041.6| Mouse DNA sequence from clone RP23-342H16 on chr... 44 0.40
11ref|NM_112491.5| Arabidopsis thaliana unknown protein AT3G16200 ... 42 1.6
12gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosom... 42 1.6
13emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in... 42 1.6
14gb|AY128888.1| Arabidopsis thaliana unknown protein (At3g16200) ... 42 1.6
15gb|AY099696.1| Arabidopsis thaliana unknown protein (At3g16200) ... 42 1.6
16emb|BX822287.1|CNS0A73V Arabidopsis thaliana Full-length cDNA Co... 42 1.6
17emb|BX822858.1|CNS0A71O Arabidopsis thaliana Full-length cDNA Co... 42 1.6
18emb|BX823343.1|CNS0A6IT Arabidopsis thaliana Full-length cDNA Co... 42 1.6
19dbj|AB023046.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 1.6
20gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, com... 40 6.2
21gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, co... 40 6.2
22gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, compl... 40 6.2
23emb|Z81479.1|CEC34F6 Caenorhabditis elegans Cosmid C34F6, comple... 40 6.2
24gb|AC107883.6| Homo sapiens chromosome 15, clone CTD-2318C11, co... 40 6.2
25gb|CP000302.1| Shewanella denitrificans OS217, complete genome 40 6.2
26gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.2
27gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Can... 40 6.2
28gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 ma... 40 6.2
29gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, com... 40 6.2
30gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence 40 6.2
31gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, com... 40 6.2
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
33gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, c... 40 6.2
34gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280... 40 6.2
35gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complet... 40 6.2
36gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, co... 40 6.2
37dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
38dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
39gb|BC070710.1| Xenopus laevis Myc binding protein Xmax2, mRNA (c... 40 6.2
40ref|XM_318505.2| Anopheles gambiae str. PEST ENSANGP00000021750 ... 40 6.2
41gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, compl... 40 6.2
42emb|BX296531.5| Mouse DNA sequence from clone RP24-82I9 on chrom... 40 6.2
43gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 40 6.2 
>dbj|AK119958.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-D01, full
            insert sequence
          Length = 1310

 Score =  184 bits (93), Expect = 2e-43
 Identities = 141/157 (89%)
 Strand = Plus / Minus

                                                                        
Query: 250  tcacactgagcaagggctttgccacattgatatatctgatattagatcacggagttgatc 309
            ||||||||||||||| || |||||||||||||| || ||||||| |||| ||||||| ||
Sbjct: 1014 tcacactgagcaaggactctgccacattgatatgtccgatattaaatcatggagttggtc 955

                                                                        
Query: 310  gatgaggagctttagttgtttgtttttgcttccaatttcctttctcaaagaagatgcatg 369
            ||| ||||||||||  || |||||||||||| |||||||||||||||||| |||||||||
Sbjct: 954  gataaggagctttacatgcttgtttttgctttcaatttcctttctcaaagcagatgcatg 895

                                                 
Query: 370  ctcttccaatctctcaatctcggcttgatcacctttg 406
             |||||||||||||||||||| ||||||||| |||||
Sbjct: 894  ttcttccaatctctcaatctcagcttgatcagctttg 858
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>gb|AY107890.1| Zea mays PCO143404 mRNA sequence
          Length = 645

 Score =  145 bits (73), Expect = 1e-31
 Identities = 124/141 (87%)
 Strand = Plus / Plus

                                                                       
Query: 250 tcacactgagcaagggctttgccacattgatatatctgatattagatcacggagttgatc 309
           |||||| ||||||||||| |||||||| | ||  || | |||||| |||||||| |||||
Sbjct: 482 tcacacagagcaagggctctgccacatggctacgtcagttattaggtcacggagctgatc 541

                                                                       
Query: 310 gatgaggagctttagttgtttgtttttgcttccaatttcctttctcaaagaagatgcatg 369
            ||||||||||||| ||| |||||||||||| ||||||||||||| |||| ||| |||||
Sbjct: 542 catgaggagctttacttgcttgtttttgctttcaatttcctttcttaaagcagaagcatg 601

                                
Query: 370 ctcttccaatctctcaatctc 390
           |||||||||||||||||||||
Sbjct: 602 ctcttccaatctctcaatctc 622
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                            
Query: 250      tcacactgagcaagggctttgccacattgatatatctgatattagatcacggagttgatc 309
                ||||||||||||||| || |||||||||||||| || ||||||| |||| ||||||| ||
Sbjct: 19125105 tcacactgagcaaggactctgccacattgatatgtccgatattaaatcatggagttggtc 19125164

                                                         
Query: 310      gatgaggagctttagttgtttgtttttgcttccaatttcct 350
                ||| ||||||||||  || |||||||||||| |||||||||
Sbjct: 19125165 gataaggagctttacatgcttgtttttgctttcaatttcct 19125205



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                           
Query: 348      cctttctcaaagaagatgcatgctcttccaatctctcaatctcggcttgatcacctttg 406
                |||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 19126773 cctttctcaaagcagatgcatgttcttccaatctctcaatctcagcttgatcagctttg 19126831
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>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
             complete sequence
          Length = 151936

 Score =  105 bits (53), Expect = 1e-19
 Identities = 89/101 (88%)
 Strand = Plus / Plus

                                                                         
Query: 250   tcacactgagcaagggctttgccacattgatatatctgatattagatcacggagttgatc 309
             ||||||||||||||| || |||||||||||||| || ||||||| |||| ||||||| ||
Sbjct: 58626 tcacactgagcaaggactctgccacattgatatgtccgatattaaatcatggagttggtc 58685

                                                      
Query: 310   gatgaggagctttagttgtttgtttttgcttccaatttcct 350
             ||| ||||||||||  || |||||||||||| |||||||||
Sbjct: 58686 gataaggagctttacatgcttgtttttgctttcaatttcct 58726



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                        
Query: 348   cctttctcaaagaagatgcatgctcttccaatctctcaatctcggcttgatcacctttg 406
             |||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 60294 cctttctcaaagcagatgcatgttcttccaatctctcaatctcagcttgatcagctttg 60352
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>ref|XM_472288.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 594

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                     
Query: 349 ctttctcaaagaagatgcatgctcttccaatctctcaatctcggcttgatcacctttg 406
           ||||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||
Sbjct: 495 ctttctcaaagcagatgcatgttcttccaatctctcaatctcagcttgatcagctttg 438
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>emb|CT010521.4| M.truncatula DNA sequence from clone MTH2-34D24 on chromosome 3,
           complete sequence
          Length = 104085

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 348 cctttctcaaagaagatgcatgctcttccaatctctcaat 387
           |||||||||||||||| || |||||||||||| |||||||
Sbjct: 229 cctttctcaaagaagaggcttgctcttccaatttctcaat 268
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>gb|AC109778.8| Homo sapiens 3 BAC RP11-17O13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 69333

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 330   tgtttttgcttccaatttcctt 351
             ||||||||||||||||||||||
Sbjct: 43808 tgtttttgcttccaatttcctt 43787
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>gb|AC166099.2| Mus musculus BAC clone RP24-254H22 from chromosome 17, complete
             sequence
          Length = 164625

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 320   tttagttgtttgtttttgcttc 341
             ||||||||||||||||||||||
Sbjct: 71895 tttagttgtttgtttttgcttc 71916
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>gb|AC166360.4| Mus musculus BAC clone RP24-497L5 from chromosome 17, complete sequence
          Length = 201109

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 320   tttagttgtttgtttttgcttc 341
             ||||||||||||||||||||||
Sbjct: 48682 tttagttgtttgtttttgcttc 48703
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>emb|AL663041.6| Mouse DNA sequence from clone RP23-342H16 on chromosome 11, complete
            sequence
          Length = 167123

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 255  ctgagcaagggctttgccacattgat 280
            |||||||| |||||||||||||||||
Sbjct: 5165 ctgagcaaaggctttgccacattgat 5140



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 255  ctgagcaagggctttgccacattgat 280
            |||||||| |||||||||||||||||
Sbjct: 4913 ctgagcaaaggctttgccacattgat 4888
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>ref|NM_112491.5| Arabidopsis thaliana unknown protein AT3G16200 mRNA, complete cds
          Length = 1608

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 203 ttgcttccaatttcctttctc 223
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>gb|AC159820.2| Mus musculus BAC clone RP23-158K20 from chromosome 9, complete sequence
          Length = 215017

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 328    tttgtttttgcttccaatttccttt 352
              ||||||||||||||||||| |||||
Sbjct: 105124 tttgtttttgcttccaattcccttt 105148
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>emb|BX571704.13| Zebrafish DNA sequence from clone DKEY-33M14 in linkage group 9, complete
              sequence
          Length = 219065

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 92     aatacagcacaatttcacaat 112
              |||||||||||||||||||||
Sbjct: 102021 aatacagcacaatttcacaat 102041
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>gb|AY128888.1| Arabidopsis thaliana unknown protein (At3g16200) mRNA, complete cds
          Length = 1485

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 113 ttgcttccaatttcctttctc 133
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>gb|AY099696.1| Arabidopsis thaliana unknown protein (At3g16200) mRNA, complete cds
          Length = 1555

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 150 ttgcttccaatttcctttctc 170
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>emb|BX822287.1|CNS0A73V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB26ZD12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1516

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 139 ttgcttccaatttcctttctc 159
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>emb|BX822858.1|CNS0A71O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB69ZF01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1477

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 139 ttgcttccaatttcctttctc 159
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>emb|BX823343.1|CNS0A6IT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS25ZB06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 335 ttgcttccaatttcctttctc 355
           |||||||||||||||||||||
Sbjct: 178 ttgcttccaatttcctttctc 198
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>dbj|AB023046.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYA6
          Length = 75289

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 335  ttgcttccaatttcctttctc 355
            |||||||||||||||||||||
Sbjct: 6291 ttgcttccaatttcctttctc 6271
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>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence
          Length = 157629

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   ttgtttgtttttgcttccaa 344
             ||||||||||||||||||||
Sbjct: 41046 ttgtttgtttttgcttccaa 41027
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>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence
          Length = 170056

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   acttgtaggaattgattagc 240
             ||||||||||||||||||||
Sbjct: 28316 acttgtaggaattgattagc 28297
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>gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, complete sequence
          Length = 174774

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 221   acttgtaggaattgattagc 240
             ||||||||||||||||||||
Sbjct: 47827 acttgtaggaattgattagc 47846
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>emb|Z81479.1|CEC34F6 Caenorhabditis elegans Cosmid C34F6, complete sequence
          Length = 44369

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gctcgttacatttctcaaat 81
             ||||||||||||||||||||
Sbjct: 40027 gctcgttacatttctcaaat 40008
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>gb|AC107883.6| Homo sapiens chromosome 15, clone CTD-2318C11, complete sequence
          Length = 43603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 237   tagcagtgacaactcacactgagc 260
             ||||||||||| ||||||||||||
Sbjct: 22912 tagcagtgacagctcacactgagc 22935
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>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 386     atctcggcttgatcaccttt 405
               ||||||||||||||||||||
Sbjct: 3666258 atctcggcttgatcaccttt 3666277
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 292    tagatcacggagttgatcgatgaggagc 319
              ||||||| || |||||||||||||||||
Sbjct: 228537 tagatcatggcgttgatcgatgaggagc 228510
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>gb|AC122685.9| Homo sapiens 12 BAC RP11-165I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106673

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    agcaaatctacatttaacac 60
             ||||||||||||||||||||
Sbjct: 95158 agcaaatctacatttaacac 95177
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>gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 map ve018, complete
             sequence
          Length = 115359

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   tcttgggacttgtaggaatt 233
             ||||||||||||||||||||
Sbjct: 93509 tcttgggacttgtaggaatt 93490
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>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence
          Length = 193790

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 201   taactatcagatctcttgggactt 224
             |||||||||||||||||| |||||
Sbjct: 60046 taactatcagatctcttgagactt 60023
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>gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence
          Length = 156895

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   agctttagttgtttgttttt 336
             ||||||||||||||||||||
Sbjct: 79188 agctttagttgtttgttttt 79169
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>gb|AC009063.8| Homo sapiens chromosome 16 clone RP11-298D21, complete sequence
          Length = 194237

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    taactatcagatctcttgggactt 224
              |||||||||||||||||| |||||
Sbjct: 178224 taactatcagatctcttgagactt 178201
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      ttagttgtttgtttttgctt 340
                ||||||||||||||||||||
Sbjct: 21778784 ttagttgtttgtttttgctt 21778765
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>gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, complete sequence
          Length = 173604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   agctttagttgtttgttttt 336
             ||||||||||||||||||||
Sbjct: 42448 agctttagttgtttgttttt 42467
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>gb|AC012320.6|AC012320 Homo sapiens chromosome 16 clone RP11-280N16, complete sequence
          Length = 189840

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    taactatcagatctcttgggactt 224
              |||||||||||||||||| |||||
Sbjct: 118382 taactatcagatctcttgagactt 118359
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>gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complete sequence
          Length = 132626

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    actagcaaatctacatttaa 57
             ||||||||||||||||||||
Sbjct: 51775 actagcaaatctacatttaa 51794
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>gb|AC090181.9| Homo sapiens chromosome 15, clone RP11-797A18, complete sequence
          Length = 157793

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 237    tagcagtgacaactcacactgagc 260
              ||||||||||| ||||||||||||
Sbjct: 155856 tagcagtgacagctcacactgagc 155833
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>dbj|AP005460.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0610D01
          Length = 146418

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   ttagttgtttgtttttgctt 340
             ||||||||||||||||||||
Sbjct: 36865 ttagttgtttgtttttgctt 36846
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>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0006A22
          Length = 190690

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  ttagttgtttgtttttgctt 340
            ||||||||||||||||||||
Sbjct: 1269 ttagttgtttgtttttgctt 1250
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>gb|BC070710.1| Xenopus laevis Myc binding protein Xmax2, mRNA (cDNA clone MGC:83462
            IMAGE:6643884), complete cds
          Length = 3770

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 332  tttttgcttccaatttcctttctc 355
            ||||| ||||||||||||||||||
Sbjct: 2069 tttttccttccaatttcctttctc 2046
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>ref|XM_318505.2| Anopheles gambiae str. PEST ENSANGP00000021750
           (ENSANGG00000019261), partial mRNA
          Length = 762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 371 tcttccaatctctcaatctc 390
           ||||||||||||||||||||
Sbjct: 518 tcttccaatctctcaatctc 499
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>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence
          Length = 195874

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    ttgtttgtttttgcttccaa 344
              ||||||||||||||||||||
Sbjct: 189291 ttgtttgtttttgcttccaa 189310
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>emb|BX296531.5| Mouse DNA sequence from clone RP24-82I9 on chromosome 2, complete
            sequence
          Length = 24885

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 320  tttagttgtttgtttttgct 339
            ||||||||||||||||||||
Sbjct: 8881 tttagttgtttgtttttgct 8862
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>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   ttgtttgtttttgcttccaa 344
             ||||||||||||||||||||
Sbjct: 96871 ttgtttgtttttgcttccaa 96852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,969,621
Number of Sequences: 3902068
Number of extensions: 4969621
Number of successful extensions: 96452
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96287
Number of HSP's gapped (non-prelim): 164
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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