>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine
            synthetase 1 mRNA, complete cds
          Length = 1973

 Score =  490 bits (247), Expect = e-135
 Identities = 256/258 (99%), Gaps = 1/258 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    accttaggtctgcatcactctaatggcaagacnaggtacatcttatttcttatcagaaac 60
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1910 accttaggtctgcatcactctaatggcaagactaggtacatcttatttcttatcagaaac 1851

                                                                        
Query: 61   ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1850 ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgat 1791

                                                                        
Query: 121  catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgctcata 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1790 catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgctcata 1731

                                                                        
Query: 181  ggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1730 ggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccg 1671

                              
Query: 241  agcatncccactctactg 258
            ||||| ||||||||||||
Sbjct: 1670 agcat-cccactctactg 1654

>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence
          Length = 2064

 Score =  422 bits (213), Expect = e-115
 Identities = 246/256 (96%), Gaps = 1/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    accttaggtctgcatcactctaatggcaagacnaggtacatcttatttcttatcagaaac 60
            |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1894 accttaggtctgcaccactctaatggcaagaccaggtacatcttatttcttatcagaaac 1835

                                                                        
Query: 61   ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgat 120
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1834 ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggcgccgcaacctcgat 1775

                                                                        
Query: 121  catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgctcata 180
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1774 catccttggcttcttgctggttcctgccatgatggttgctgggagatgctcctgttcata 1715

                                                                        
Query: 181  ggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 1714 ggccgagagatggactccaagtgctgctctccctgagggatccaggttccctgaccactg 1655

                            
Query: 241  agcatncccactctac 256
             |||| ||||||||||
Sbjct: 1654 ggcat-cccactctac 1640

>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1)
            mRNA, complete cds
          Length = 1815

 Score =  325 bits (164), Expect = 4e-86
 Identities = 189/196 (96%), Gaps = 1/196 (0%)
 Strand = Plus / Minus

                                                                        
Query: 61   ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaaccttgat 120
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 1800 ggcaagcaggacaggacaccatcaactctcaattgcgacaccaggcgccgcaacctcgat 1741

                                                                        
Query: 121  catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgctcata 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1740 catcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgttcata 1681

                                                                        
Query: 181  ggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 1680 ggccgagagatggactccaagtgctgctctccctgagggatccaggttccctgaccactg 1621

                            
Query: 241  agcatncccactctac 256
             |||| ||||||||||
Sbjct: 1620 ggcat-cccactctac 1606

>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds
          Length = 1867

 Score = 89.7 bits (45), Expect = 4e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 170  tcctgctcataggccgagagatggactccaagtgctgctctccctgagggatccaggttc 229
            |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 1670 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1611

                     
Query: 230  cccgaccac 238
            || ||||||
Sbjct: 1610 ccagaccac 1602

>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA
            sequence
          Length = 2119

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 62/68 (91%)
 Strand = Plus / Minus

                                                                        
Query: 170  tcctgctcataggccgagagatggactccaagtgctgctctccctgagggatccaggttc 229
            |||||||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 1739 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1680

                    
Query: 230  cccgacca 237
            || |||||
Sbjct: 1679 ccagacca 1672

>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4)
          Length = 2200

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 194  actccaagtgctgctctccctgagggatccaggtt 228
            ||||||||||||||||| || || |||||||||||
Sbjct: 1742 actccaagtgctgctctaccagaaggatccaggtt 1708

>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I
          Length = 2086

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 194  actccaagtgctgctctccctgagggatccaggtt 228
            ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1793 actccaagtgctgctctacctgatggatcaaggtt 1759

>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds
          Length = 2108

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 194  actccaagtgctgctctccctgagggatccaggtt 228
            ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1796 actccaagtgctgctctacctgatggatcaaggtt 1762

>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds
          Length = 2143

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 194  actccaagtgctgctctccctgagggatccaggtt 228
            ||||||||||||||||| || |||||||| |||||
Sbjct: 1800 actccaagtgctgctctaccagagggatcaaggtt 1766

>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1)
          Length = 2053

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 188  agatggactccaagtgctgctctccctgagggatccaggtt 228
            ||||| ||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1750 agatgcactcctagtgctgctctacctgaaggatcaaggtt 1710

>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     gatgctcctgctcataggcc 184
               ||||||||||||||||||||
Sbjct: 2224484 gatgctcctgctcataggcc 2224503

>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the
            3' end of the COL4A2 gene for collagen type IV alpha 2,
            the RAB20 gene for a RAS oncogene family member, a novel
            gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel
            gene (FLJ12118) and three CpG islands, complete sequence
          Length = 177392

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 132  tcttgctggttcctgccatgatgg 155
            |||||||| |||||||||||||||
Sbjct: 8457 tcttgctgtttcctgccatgatgg 8480

>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase
          Length = 2154

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 194  actccaagtgctgctctccctgagggatccaggttccccgacca 237
            ||||||||||||||||| || || ||||| ||||| || |||||
Sbjct: 1766 actccaagtgctgctctaccagatggatcaaggttgcctgacca 1723

>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence
          Length = 146549

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 201  gtgctgctctccctgagggatcca 224
            |||||||||||| |||||||||||
Sbjct: 3400 gtgctgctctccatgagggatcca 3423

>gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, complete sequence
          Length = 170299

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 201    gtgctgctctccctgagggatcca 224
              |||||||||||| |||||||||||
Sbjct: 156531 gtgctgctctccatgagggatcca 156554

>gb|AC092755.4| Homo sapiens chromosome 15 clone RP11-361D15 map 15q22, complete
             sequence
          Length = 187429

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     ccttaggtctgcatcactct 21
             ||||||||||||||||||||
Sbjct: 14165 ccttaggtctgcatcactct 14184

>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete sequence
          Length = 173411

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      ccttaggtctgcatcactct 21
              ||||||||||||||||||||
Sbjct: 152367 ccttaggtctgcatcactct 152386

>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE
          Length = 125647

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 194  actccaagtgctgctctccctgagggatccaggttc 229
            ||||||||||||||||| || || ||||| ||||||
Sbjct: 7521 actccaagtgctgctctaccagaaggatcaaggttc 7486

>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence
          Length = 248067

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 201    gtgctgctctccctgagggatcca 224
              ||||||||||||| ||||||||||
Sbjct: 165502 gtgctgctctcccagagggatcca 165479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,035,183
Number of Sequences: 3902068
Number of extensions: 2035183
Number of successful extensions: 37712
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37684
Number of HSP's gapped (non-prelim): 28
length of query: 258
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 236
effective length of database: 17,147,199,772
effective search space: 4046739146192
effective search space used: 4046739146192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)