Clone Name | rbasd20l20 |
---|---|
Clone Library Name | barley_pub |
>gb|AC093346.7| Mus musculus chromosome 5, clone RP23-15K13, complete sequence Length = 211278 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cccatctgaaggaaaactaa 24 |||||||||||||||||||| Sbjct: 69560 cccatctgaaggaaaactaa 69541
>gb|AC158379.5| Mus musculus BAC clone RP24-497L12 from chromosome 5, complete sequence Length = 209526 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cccatctgaaggaaaactaa 24 |||||||||||||||||||| Sbjct: 161585 cccatctgaaggaaaactaa 161566
>gb|AF267747.1|AF267747 Mus musculus p47-phox gene, complete cds Length = 180686 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cccatctgaaggaaaactaa 24 |||||||||||||||||||| Sbjct: 67151 cccatctgaaggaaaactaa 67132
>gb|AC073651.23| Homo sapiens 12 BAC RP11-6B19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165565 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 tgaaggaaaactaaactat 29 ||||||||||||||||||| Sbjct: 2797 tgaaggaaaactaaactat 2815
>gb|AC025656.7| Homo sapiens chromosome 18, clone RP11-36L19, complete sequence Length = 193351 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 catctgaaggaaaactaaa 25 ||||||||||||||||||| Sbjct: 119094 catctgaaggaaaactaaa 119076
>gb|AC154622.2| Mus musculus BAC clone RP23-325D11 from chromosome 16, complete sequence Length = 189631 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 gagcccatctgaaggaaaa 20 ||||||||||||||||||| Sbjct: 78411 gagcccatctgaaggaaaa 78429
>emb|BX927255.9| Zebrafish DNA sequence from clone CH211-266I18 in linkage group 20, complete sequence Length = 155519 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 10 ctgaaggaaaactaaacta 28 ||||||||||||||||||| Sbjct: 18370 ctgaaggaaaactaaacta 18352
>emb|CT025586.10| Mouse DNA sequence from clone RP23-433J21 on chromosome 16, complete sequence Length = 190365 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 gagcccatctgaaggaaaa 20 ||||||||||||||||||| Sbjct: 82527 gagcccatctgaaggaaaa 82509
>emb|AL928794.4| Mouse DNA sequence from clone RP23-51H24 on chromosome 2, complete sequence Length = 50262 Score = 38.2 bits (19), Expect = 6.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 12 gaaggaaaactaaactatc 30 ||||||||||||||||||| Sbjct: 40847 gaaggaaaactaaactatc 40865 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 457,348 Number of Sequences: 3902068 Number of extensions: 457348 Number of successful extensions: 39058 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 39045 Number of HSP's gapped (non-prelim): 13 length of query: 130 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 109 effective length of database: 17,151,101,840 effective search space: 1869470100560 effective search space used: 1869470100560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)