ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20l18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB058923.1| Hordeum vulgare mRNA for protein kinase HvPKABA1, complete cds, cultivar:Himalaya Length = 1329 Score = 1146 bits (578), Expect = 0.0 Identities = 586/589 (99%) Strand = Plus / Minus Query: 9 cttaactagtgatttcgatattcgcatgtaaacttgtctcatactggtttctacacggca 68 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1329 cttaactagtgatttcgatattcgcatgtaaacttgtctcgtactggtttctacacggca 1270 Query: 69 aggccgatctgtgcagcccacagaaaatatgtgatccggaagaaaatcgaagcacgacaa 128 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 aggccgatctgtgcagcacacagaaaatatgtgatccggaagaaaatcgaagcacgacaa 1210 Query: 129 acagggatccatccacagctaaaccaccaagaacttctaaacccatcagcatcacaacgg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 acagggatccatccacagctaaaccaccaagaacttctaaacccatcagcatcacaacgg 1150 Query: 189 gcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaatcaatgtcgtc 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 gcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaatcaatgtcgtc 1090 Query: 249 tagatccatgctccccaggcaggcaacctgcccagcaagccctagggcgttatgacccgg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 tagatccatgctccccaggcaggcaacctgcccagcaagccctagggcgttatgacccgg 1030 Query: 309 tttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtgttcat 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 tttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtgttcat 970 Query: 369 gtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgtttgag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgtttgag 910 Query: 429 gaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttccaacgaa 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 gaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttccaacgaa 850 Query: 489 aatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacggagta 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 aatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacggagta 790 Query: 549 ctgtacgctgagtatccttgcgatcgttttgcggaagttnctcggctca 597 ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 789 ctgtacgctgagtatccttgcgatcgttttgcggaagttcctcggctca 741
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 934 bits (471), Expect = 0.0 Identities = 471/471 (100%) Strand = Plus / Minus Query: 1 gagtattccttaactagtgatttcgatattcgcatgtaaacttgtctcatactggtttct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10950 gagtattccttaactagtgatttcgatattcgcatgtaaacttgtctcatactggtttct 10891 Query: 61 acacggcaaggccgatctgtgcagcccacagaaaatatgtgatccggaagaaaatcgaag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10890 acacggcaaggccgatctgtgcagcccacagaaaatatgtgatccggaagaaaatcgaag 10831 Query: 121 cacgacaaacagggatccatccacagctaaaccaccaagaacttctaaacccatcagcat 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10830 cacgacaaacagggatccatccacagctaaaccaccaagaacttctaaacccatcagcat 10771 Query: 181 cacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaatca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10770 cacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaatca 10711 Query: 241 atgtcgtctagatccatgctccccaggcaggcaacctgcccagcaagccctagggcgtta 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10710 atgtcgtctagatccatgctccccaggcaggcaacctgcccagcaagccctagggcgtta 10651 Query: 301 tgacccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10650 tgacccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggc 10591 Query: 361 gtgttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcagg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10590 gtgttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcagg 10531 Query: 421 cgtttgaggaaccatggatggttcttgatctccgggatggttattcgctgc 471 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10530 cgtttgaggaaccatggatggttcttgatctccgggatggttattcgctgc 10480 Score = 196 bits (99), Expect = 6e-47 Identities = 99/99 (100%) Strand = Plus / Minus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10292 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 10233 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10232 aacgtagtccggaacggagtactgtacgctgagtatcct 10194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 567 tgcgatcgttttgcggaagttnctcggctca 597 ||||||||||||||||||||| ||||||||| Sbjct: 10087 tgcgatcgttttgcggaagttcctcggctca 10057
>gb|M94726.1|M94726 Triticum aestivum protein kinase mRNA, partial cds Length = 1210 Score = 605 bits (305), Expect = e-170 Identities = 436/477 (91%), Gaps = 6/477 (1%) Strand = Plus / Minus Query: 127 aaacagggatccatccacagctaaaccaccaaga--acttctaaacc---catcagca-t 180 |||||||||||||||||||| |||||| ||||| |||| | |||| ||| |||| | Sbjct: 1058 aaacagggatccatccacaggcaaaccatcaagagaacttttgaaccactcatgagcaat 999 Query: 181 cacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaatca 240 ||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||| Sbjct: 998 cacaacgggcacacgaaatccccgctgctctcaacgtcaatgtcgtcgatatcgaaatcg 939 Query: 241 atgtcgtctagatccatgctccccaggcaggcaacctgcccagcaagccctagggcgtta 300 |||||||| | |||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 938 atgtcgtccaaatccatgctccccaggcaggcaacctgcccggcaacccctagggcgtta 879 Query: 301 tgacccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggc 360 | || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 878 tcgccaggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgtgacggc 819 Query: 361 gtgttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcagg 420 |||||||||||||||| |||||||| |||||||||||| || |||||||||||||||| Sbjct: 818 gtgttcatgtctgccagctgcatgctcctttggtactcatcggtcatctcaacgggcaat 759 Query: 421 cgtttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggattt 480 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 ctcttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggattt 699 Query: 481 ccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccgga 540 |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 698 ccaacgaaaatgcgggacagtagatgtatgcagtccatcgagactcgaacgtagtccgga 639 Query: 541 acggagtactgtacgctgagtatccttgcgatcgttttgcggaagttnctcggctca 597 || ||||||||||||||||||||||| | |||||||||||||||||| || |||||| Sbjct: 638 acagagtactgtacgctgagtatcctagtgatcgttttgcggaagttccttggctca 582 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 aactagtgatttcgatattcgcatgtaaactt 43 ||||| |||||||||||| |||||||||||| Sbjct: 1173 aactactgatttcgatataagcatgtaaactt 1142
>gb|U29095.1|U29095 Triticum aestivum serine-threonine protein kinase (TaPK3) gene, exons 3 through 9 and complete cds Length = 2250 Score = 422 bits (213), Expect = e-115 Identities = 279/299 (93%), Gaps = 4/299 (1%) Strand = Plus / Minus Query: 176 agcatcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcga---cgt 232 |||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||| Sbjct: 1961 agcatcacaacgggcacacgaaatccccgctgttctcaat-tcgatgtcgtcgatgtcgt 1903 Query: 233 cgaaatcaatgtcgtctagatccatgctccccaggcaggcaacctgcccagcaagcccta 292 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1902 cgaaatcaatgtcatctagatccatgctccccaggcaggcaacctgcccagcaattccta 1843 Query: 293 gggcgttatgacccggtttctgcgcctcctggatgatcgccatggcttcttccaggctct 352 ||||||||| |||||||||||| ||||| ||||||||||||||||||||||||| ||||| Sbjct: 1842 gggcgttatcacccggtttctgtgcctcgtggatgatcgccatggcttcttccatgctct 1783 Query: 353 gcgacggcgtgttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaa 412 | ||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| Sbjct: 1782 gtgacggcgtgttcatgtctgccaactgcatgctcctttggtactcatcggtcatctcaa 1723 Query: 413 cgggcaggcgtttgaggaaccatggatggttcttgatctccgggatggttattcgctgc 471 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1722 cgggcagttgtttgaggaaccatggatggttcttgatctccggcatggttattcgctgc 1664 Score = 157 bits (79), Expect = 5e-35 Identities = 94/99 (94%) Strand = Plus / Minus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 ||||||||||||||||| ||||||||||||||||| ||| ||||| |||||||||||||| Sbjct: 1597 ctgctgaggatttccaatgaaaatgcgggacagcaaatgcatgcagtccatcgagactcg 1538 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 ||||||||||||||| ||||||||||||||||||||||| Sbjct: 1537 aacgtagtccggaacagagtactgtacgctgagtatcct 1499 Score = 50.1 bits (25), Expect = 0.008 Identities = 56/65 (86%), Gaps = 6/65 (9%) Strand = Plus / Minus Query: 88 acagaaaatatgtgatccggaagaaaatcgaa-----gcacgacaaa-cagggatccatc 141 |||||||||||||||||| |||||||||| || ||| |||||| |||||||||||| Sbjct: 2060 acagaaaatatgtgatccagaagaaaatccaacccaagcatgacaaaacagggatccatc 2001 Query: 142 cacag 146 ||||| Sbjct: 2000 cacag 1996
>ref|XM_470803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1468 Score = 254 bits (128), Expect = 3e-64 Identities = 245/284 (86%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1112 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 1053 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 1052 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 993 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcca 483 || ||||||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||| Sbjct: 992 ttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggatttcca 933 Query: 484 acgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacg 543 |||||||| |||||||| |||||| |||| ||| || |||||||||||||| |||| Sbjct: 932 acgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctggaatt 873 Query: 544 gagtactgtacgctgagtatccttgcgatcgttttgcggaagtt 587 || |||||||| ||||||||||| | |||||| ||||||||||| Sbjct: 872 gaatactgtacactgagtatcctagtgatcgtcttgcggaagtt 829 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1237 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 1181 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1180 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 1138
>dbj|AB125302.1| Oryza sativa (japonica cultivar-group) SAPK1 mRNA for serine/threonine protein kinase SAPK1, complete cds Length = 1471 Score = 254 bits (128), Expect = 3e-64 Identities = 245/284 (86%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1141 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 1082 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 1081 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 1022 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcca 483 || ||||||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||| Sbjct: 1021 ttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggatttcca 962 Query: 484 acgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacg 543 |||||||| |||||||| |||||| |||| ||| || |||||||||||||| |||| Sbjct: 961 acgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctggaatt 902 Query: 544 gagtactgtacgctgagtatccttgcgatcgttttgcggaagtt 587 || |||||||| ||||||||||| | |||||| ||||||||||| Sbjct: 901 gaatactgtacactgagtatcctagtgatcgtcttgcggaagtt 858 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1266 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 1210 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1209 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 1167
>dbj|AK068899.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G01, full insert sequence Length = 1674 Score = 254 bits (128), Expect = 3e-64 Identities = 245/284 (86%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1122 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 1063 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 1062 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 1003 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcca 483 || ||||||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||| Sbjct: 1002 ttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggatttcca 943 Query: 484 acgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacg 543 |||||||| |||||||| |||||| |||| ||| || |||||||||||||| |||| Sbjct: 942 acgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctggaatt 883 Query: 544 gagtactgtacgctgagtatccttgcgatcgttttgcggaagtt 587 || |||||||| ||||||||||| | |||||| ||||||||||| Sbjct: 882 gaatactgtacactgagtatcctagtgatcgtcttgcggaagtt 839 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1247 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 1191 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1190 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 1148
>dbj|AK060856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-F03, full insert sequence Length = 1390 Score = 254 bits (128), Expect = 3e-64 Identities = 245/284 (86%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 1079 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 1020 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 1019 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 960 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcca 483 || ||||||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||| Sbjct: 959 ttcaggaaccatgggtggttcttgatctctgggatagttatcctctgctcaggatttcca 900 Query: 484 acgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacg 543 |||||||| |||||||| |||||| |||| ||| || |||||||||||||| |||| Sbjct: 899 acgaaaatccgggacaggagatgtctgcagtccgctgaaactcgaacgtagtctggaatt 840 Query: 544 gagtactgtacgctgagtatccttgcgatcgttttgcggaagtt 587 || |||||||| ||||||||||| | |||||| ||||||||||| Sbjct: 839 gaatactgtacactgagtatcctagtgatcgtcttgcggaagtt 796 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 1204 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 1148 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1147 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 1105
>gb|AY108950.1| Zea mays PCO069505 mRNA sequence Length = 1328 Score = 186 bits (94), Expect = 6e-44 Identities = 229/274 (83%) Strand = Plus / Minus Query: 314 gcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtgttcatgtctg 373 |||||||||||||||||||||| | || |||||||| ||| ||| ||||||||||||| Sbjct: 1028 gcgcctcctggatgatcgccatcacctcctccaggctttgccccggggtgttcatgtctg 969 Query: 374 ccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgtttgaggaacc 433 |||||||||||| | ||||||||||| |||||||| | |||||| |||||||||| Sbjct: 968 ccaactgcatgctctgctggtactcgtcggtcatctcgatgggcagattcttgaggaacc 909 Query: 434 atggatggttcttgatctccgggatggttattcgctgctgaggatttccaacgaaaatgc 493 | || || ||||||||||| || |||||||||| ||||| |||||||||||| || || | Sbjct: 908 acgggtgcttcttgatctcaggaatggttattctctgctcaggatttccaacaaatatcc 849 Query: 494 gggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaacggagtactgta 553 | |||||||||||| ||| ||||| | || ||||||||||| |||| |||||||||| Sbjct: 848 gagacagcagatgtccgcactccattgtaacgcgaacgtagtctggaattgagtactgta 789 Query: 554 cgctgagtatccttgcgatcgttttgcggaagtt 587 | |||||||| || | |||||| ||||||||||| Sbjct: 788 cactgagtattctcgtgatcgtcttgcggaagtt 755 Score = 71.9 bits (36), Expect = 2e-09 Identities = 71/82 (86%), Gaps = 3/82 (3%) Strand = Plus / Minus Query: 193 acgaagtccccgctgttctcaatgtcaatgtcgtcga---cgtcgaaatcaatgtcgtct 249 |||||||| |||||||||||| |||| |||||||| | |||| |||||||||||||| Sbjct: 1149 acgaagtcgccgctgttctcagtgtcgatgtcgtcaatatcgtcaaaatcaatgtcgtca 1090 Query: 250 agatccatgctccccaggcagg 271 || |||| |||||||||||||| Sbjct: 1089 aggtccacgctccccaggcagg 1068
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence Length = 1082 Score = 172 bits (87), Expect = 8e-40 Identities = 96/99 (96%) Strand = Plus / Minus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 884 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatggagactcg 825 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 |||||||||||||| |||||||||||| ||||||||||| Sbjct: 824 aacgtagtccggaatggagtactgtacactgagtatcct 786 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 439 tggttcttgatctccgggatggttattcgctgc 471 ||||||||||||||||||||||||||||||||| Sbjct: 1078 tggttcttgatctccgggatggttattcgctgc 1046
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 15466845 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 15466904 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 15466905 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 15466964 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttat 464 || ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 15466965 ttcaggaaccatgggtggttcttgatctctgggatagttat 15467005 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 15466720 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 15466776 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 15466777 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 15466819 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 ||||| |||||||||||||||||| |||||||| |||||| |||| ||| || ||||| Sbjct: 15467132 ctgctcaggatttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcg 15467191 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 15467192 aacgtagtctggaattgaatactgtacactgagtatcct 15467230
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 34681 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 34622 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 34621 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 34562 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttat 464 || ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 34561 ttcaggaaccatgggtggttcttgatctctgggatagttat 34521 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 34806 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 34750 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 34749 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 34707 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 ||||| |||||||||||||||||| |||||||| |||||| |||| ||| || ||||| Sbjct: 34394 ctgctcaggatttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcg 34335 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 34334 aacgtagtctggaattgaatactgtacactgagtatcct 34296
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 304 cccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgtg 363 ||||||||| | |||||||| |||||||||||| | || ||||||||||||||||||||| Sbjct: 15461379 cccggtttccgggcctcctgaatgatcgccatgacctcctccaggctctgcgacggcgtg 15461438 Query: 364 ttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcgt 423 |||||||| |||| |||||||| ||| ||||||||||| |||||||| | ||||||| Sbjct: 15461439 ttcatgtccgccagctgcatgctcctctggtactcgtcggtcatctcgatgggcaggttc 15461498 Query: 424 ttgaggaaccatggatggttcttgatctccgggatggttat 464 || ||||||||||| |||||||||||||| ||||| ||||| Sbjct: 15461499 ttcaggaaccatgggtggttcttgatctctgggatagttat 15461539 Score = 113 bits (57), Expect = 7e-22 Identities = 92/103 (89%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 179 atcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcgacgtcgaaat 238 ||||||| | |||||||||||||||||||||||| |||||||||||||||| ||| | Sbjct: 15461254 atcacaaggcgcacacgaagtccccgctgttctcgatgtcaatgtcgtcgatatcg---t 15461310 Query: 239 caatgtcgtctagatccatgctccccaggcaggcaacctgccc 281 | |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 15461311 cgatgtcgtcgagatccatgctccccaggcaggcgacctgccc 15461353 Score = 85.7 bits (43), Expect = 2e-13 Identities = 85/99 (85%) Strand = Plus / Plus Query: 468 ctgctgaggatttccaacgaaaatgcgggacagcagatgtatgcaatccatcgagactcg 527 ||||| |||||||||||||||||| |||||||| |||||| |||| ||| || ||||| Sbjct: 15461666 ctgctcaggatttccaacgaaaatccgggacaggagatgtctgcagtccgctgaaactcg 15461725 Query: 528 aacgtagtccggaacggagtactgtacgctgagtatcct 566 ||||||||| |||| || |||||||| ||||||||||| Sbjct: 15461726 aacgtagtctggaattgaatactgtacactgagtatcct 15461764
>ref|NM_189878.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1398 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 1128 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 1069 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 1068 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 1009 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 1008 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 949 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 948 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 889 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 888 catgtattgtacgcttagtatcc 866 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1242 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1194
>ref|XM_506481.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.134 mRNA Length = 1414 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 1130 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 1071 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 1070 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 1011 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 1010 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 951 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 950 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 891 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 890 catgtattgtacgcttagtatcc 868 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1244 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1196
>gb|AY207043.1| Oryza sativa (indica cultivar-group) abcisic acid-inducible protein kinanase mRNA, partial cds Length = 1089 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 949 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 890 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 889 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 830 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 829 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 770 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 769 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 710 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 709 catgtattgtacgcttagtatcc 687 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1063 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1015
>dbj|AB125303.1| Oryza sativa (japonica cultivar-group) sapk2 mRNA for serine/threonine protein kinase SAPK2, complete cds Length = 1401 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 1131 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 1072 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 1071 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 1012 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 1011 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 952 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 951 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 892 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 891 catgtattgtacgcttagtatcc 869 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1245 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1197
>dbj|AK103945.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A05, full insert sequence Length = 1397 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 1127 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 1068 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 1067 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 1008 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 1007 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 948 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 947 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 888 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 887 catgtattgtacgcttagtatcc 865 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1241 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1193
>dbj|AK070965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068H23, full insert sequence Length = 1414 Score = 117 bits (59), Expect = 4e-23 Identities = 212/263 (80%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 1130 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 1071 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 1070 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 1011 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgctgaggatttcc 482 |||||||||||||| |||||||||||||| || ||||| ||||| |||| || ||| | Sbjct: 1010 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgttgctctgggtttgc 951 Query: 483 aacgaaaatgcgggacagcagatgtatgcaatccatcgagactcgaacgtagtccggaac 542 |||||||| |||||||| |||||| |||| |||||||| |||||||| || || ||||| Sbjct: 950 cacgaaaatccgggacagaagatgtctgcattccatcgaaactcgaacataatcaggaac 891 Query: 543 ggagtactgtacgctgagtatcc 565 ||| |||||||| ||||||| Sbjct: 890 catgtattgtacgcttagtatcc 868 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 1244 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 1196
>gb|AY714526.1| Aegilops tauschii protein kinase 1 mRNA, complete cds Length = 1438 Score = 87.7 bits (44), Expect = 4e-14 Identities = 143/176 (81%) Strand = Plus / Minus Query: 391 tggtactcgtctgtcatctcaacgggcaggcgtttgaggaaccatggatggttcttgatc 450 ||||||||||| |||||||| | ||||| ||||||||||| || |||||||||||| Sbjct: 1036 tggtactcgtcggtcatctcgatcggcagattcttgaggaaccacgggtggttcttgatc 977 Query: 451 tccgggatggttattcgctgctgaggatttccaacgaaaatgcgggacagcagatgtatg 510 || ||||||||||||| |||| ||| ||| | |||||||| |||||||||| |||| || Sbjct: 976 tcttggatggttattcgttgctcagggtttgccacgaaaatccgggacagcaaatgtctg 917 Query: 511 caatccatcgagactcgaacgtagtccggaacggagtactgtacgctgagtatcct 566 || ||||| || | || || || || || || ||||| ||||| ||||||||||| Sbjct: 916 cactccattgaaatccggacataatcaggtactgagtattgtacactgagtatcct 861 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 304 cccggtttctgcgcctcctggatgatcgccatg 336 |||||| || |||||||||||||||| |||||| Sbjct: 1123 cccggtatccgcgcctcctggatgatggccatg 1091
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 81.8 bits (41), Expect = 2e-12 Identities = 137/169 (81%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 25668145 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 25668086 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 25668085 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 25668026 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgc 471 |||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 25668025 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgctgc 25667977 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 25668259 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 25668211
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 81.8 bits (41), Expect = 2e-12 Identities = 137/169 (81%) Strand = Plus / Minus Query: 303 acccggtttctgcgcctcctggatgatcgccatggcttcttccaggctctgcgacggcgt 362 |||||| ||| |||||||||| ||||| |||||| || ||||||| ||| ||||| || Sbjct: 122118 acccggcttccgcgcctcctgtatgatggccatgatctcctccaggccctgtgacggggt 122059 Query: 363 gttcatgtctgccaactgcatgcccctttggtactcgtctgtcatctcaacgggcaggcg 422 ||| ||||| || ||| | || | | ||||||||||| |||||||| | |||||| Sbjct: 122058 gttgatgtcgttcatctggacgctcatctggtactcgtcagtcatctcgatcggcaggtt 121999 Query: 423 tttgaggaaccatggatggttcttgatctccgggatggttattcgctgc 471 |||||||||||||| |||||||||||||| || ||||| ||||||||| Sbjct: 121998 cttgaggaaccatgggtggttcttgatctcaggaatggtaattcgctgc 121950 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 180 tcacaacgggcacacgaagtccccgctgttctcaatgtcaatgtcgtcg 228 |||||| | |||||||||||| ||||||| ||| | ||| ||||||||| Sbjct: 122232 tcacaatgcgcacacgaagtcgccgctgtcctcgacgtcgatgtcgtcg 122184
>gb|AY107474.1| Zea mays PCO105841 mRNA sequence Length = 970 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 391 tggtactcgtctgtcatctcaacgggcaggcgtttgaggaaccatggatggttcttgatc 450 ||||||||||| |||||||| | ||||||| || ||||||||||| |||||||||||| Sbjct: 495 tggtactcgtcggtcatctcgatgggcaggttcttcaggaaccatgggtggttcttgatc 436 Query: 451 tccgggatggttat 464 || ||||||||||| Sbjct: 435 tctgggatggttat 422
>gb|AY661658.1| Sorghum bicolor clone BAC 796all, complete sequence Length = 103167 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 424 ttgaggaaccatggatggttcttgatctc 452 |||| ||||||||||||| |||||||||| Sbjct: 26525 ttgacgaaccatggatggctcttgatctc 26553
>gb|AY661657.1| Sorghum bicolor clone BAC 60H10, complete sequence Length = 125927 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 424 ttgaggaaccatggatggttcttgatctc 452 |||| ||||||||||||| |||||||||| Sbjct: 93170 ttgacgaaccatggatggctcttgatctc 93198
>gb|AC009204.5|AC009204 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR03E19, complete sequence Length = 167777 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atgctccccaggcaggcaacc 276 ||||||||||||||||||||| Sbjct: 93403 atgctccccaggcaggcaacc 93423
>gb|AC011756.5|AC011756 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR17A06, complete sequence Length = 170546 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atgctccccaggcaggcaacc 276 ||||||||||||||||||||| Sbjct: 43989 atgctccccaggcaggcaacc 44009
>gb|AC154430.3| Mus musculus BAC clone RP24-208K8 from chromosome 16, complete sequence Length = 178222 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 469 tgctgaggatttccaacgaaa 489 ||||||||||||||||||||| Sbjct: 93397 tgctgaggatttccaacgaaa 93377
>gb|AE003661.3| Drosophila melanogaster chromosome 2L, section 70 of 83 of the complete sequence Length = 265558 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 atgctccccaggcaggcaacc 276 ||||||||||||||||||||| Sbjct: 9127 atgctccccaggcaggcaacc 9147
>gb|AC167243.3| Mus musculus BAC clone RP24-144E2 from chromosome 9, complete sequence Length = 193364 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ctgcccagcaagccctaggg 295 |||||||||||||||||||| Sbjct: 63405 ctgcccagcaagccctaggg 63424
>gb|AC137848.31| Mus musculus chromosome 9, clone RP24-118I23, complete sequence Length = 190317 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ctgcccagcaagccctaggg 295 |||||||||||||||||||| Sbjct: 107126 ctgcccagcaagccctaggg 107107
>ref|NM_019576.1| Mus musculus thrombospondin, type I, domain 1 (Thsd1), mRNA Length = 2815 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 2677 gtgcagcccacagaaagtatgtga 2654
>gb|AC139553.5| Mus musculus chromosome 19, clone RP24-386E18, complete sequence Length = 168091 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gagtattccttaactagtga 20 |||||||||||||||||||| Sbjct: 8468 gagtattccttaactagtga 8449
>gb|AC123941.3| Mus musculus BAC clone RP23-458G24 from chromosome 19, complete sequence Length = 182733 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gagtattccttaactagtga 20 |||||||||||||||||||| Sbjct: 76749 gagtattccttaactagtga 76768
>gb|BC051957.1| Mus musculus thrombospondin, type I, domain 1, mRNA (cDNA clone IMAGE:6401753), containing frame-shift errors Length = 3261 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 2602 gtgcagcccacagaaagtatgtga 2579
>gb|AC121933.3| Mus musculus BAC clone RP24-206I11 from chromosome 8, complete sequence Length = 182816 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 65385 gtgcagcccacagaaagtatgtga 65408
>ref|XM_765844.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_608_54498_53302) partial mRNA Length = 1197 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 tggatggttcttgatctccg 454 |||||||||||||||||||| Sbjct: 774 tggatggttcttgatctccg 755
>gb|AY316305.1| Homo sapiens glutathione transferase zeta 1 (maleylacetoacetate isomerase) (GSTZ1) gene, complete cds Length = 12743 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 tctgtgcagcccacagaaaatatgtgat 103 ||||||||||||| ||||||| |||||| Sbjct: 10027 tctgtgcagcccaaagaaaatctgtgat 10000
>dbj|AK094344.1| Homo sapiens cDNA FLJ37025 fis, clone BRACE2010888, weakly similar to MALEYLACETOACETATE ISOMERASE (EC 5.2.1.2) Length = 2338 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 tctgtgcagcccacagaaaatatgtgat 103 ||||||||||||| ||||||| |||||| Sbjct: 684 tctgtgcagcccaaagaaaatctgtgat 657
>gb|AC148755.6| Medicago truncatula clone mth2-24n16, complete sequence Length = 119876 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 aaccatggatggttcttgat 449 |||||||||||||||||||| Sbjct: 81151 aaccatggatggttcttgat 81132
>gb|AC090282.6| Homo sapiens chromosome 17, clone CTD-2309O5, complete sequence Length = 164883 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cagcccacagaaaatatgtg 101 |||||||||||||||||||| Sbjct: 84659 cagcccacagaaaatatgtg 84678
>dbj|AK052555.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530002G20 product:transmembrane molecule with thrombospondin module, full insert sequence Length = 3273 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 2647 gtgcagcccacagaaagtatgtga 2624
>emb|AL683823.11| Mouse DNA sequence from clone RP23-128G10 on chromosome 3, complete sequence Length = 180483 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 atggcttcttccaggctctg 353 |||||||||||||||||||| Sbjct: 145542 atggcttcttccaggctctg 145523
>dbj|AK049636.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530010H06 product:transmembrane molecule with thrombospondin module, full insert sequence Length = 4383 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 2811 gtgcagcccacagaaagtatgtga 2788
>dbj|AK014758.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833423O18 product:transmembrane molecule with thrombospondin module, full insert sequence Length = 1297 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 1148 gtgcagcccacagaaagtatgtga 1125
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 aaaatatgtgatccggaagaaaat 115 |||||| ||||||||||||||||| Sbjct: 32056967 aaaataagtgatccggaagaaaat 32056990
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aaccaccaagaacttctaaa 169 |||||||||||||||||||| Sbjct: 30975410 aaccaccaagaacttctaaa 30975429
>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E07 Length = 176486 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 aaccaccaagaacttctaaa 169 |||||||||||||||||||| Sbjct: 32389 aaccaccaagaacttctaaa 32408
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 cgtcgacgtcgaaatcaatg 243 |||||||||||||||||||| Sbjct: 6233514 cgtcgacgtcgaaatcaatg 6233533
>gb|AC007954.7|AC007954 Homo sapiens chromosome 14 clone RP11-493G17 and CTD-2516D11 map 14q24.3, complete sequence Length = 210204 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 tctgtgcagcccacagaaaatatgtgat 103 ||||||||||||| ||||||| |||||| Sbjct: 116102 tctgtgcagcccaaagaaaatctgtgat 116075
>gb|AF053543.1|HSGSTZ1G5 Homo sapiens glutathione transferase zeta 1 (GSTZ1) gene, exons 6 and 7 Length = 964 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 76 tctgtgcagcccacagaaaatatgtgat 103 ||||||||||||| ||||||| |||||| Sbjct: 168 tctgtgcagcccaaagaaaatctgtgat 141
>gb|AF116597.1|AF116597 Metarhizium anisopliae cAMP-dependent protein kinase catalytic subunit (PKA) gene, complete cds Length = 5864 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gaaccatggatggttcttga 448 |||||||||||||||||||| Sbjct: 4815 gaaccatggatggttcttga 4796
>gb|AC108421.8| Mus musculus chromosome 19, clone RP23-433N7, complete sequence Length = 190980 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 gagtattccttaactagtga 20 |||||||||||||||||||| Sbjct: 2715 gagtattccttaactagtga 2734
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 aaaatatgtgatccggaagaaaat 115 |||||| ||||||||||||||||| Sbjct: 77674 aaaataagtgatccggaagaaaat 77697
>dbj|AB039946.1| Mus musculus TMTSP mRNA for transmembrane molecule with thrombospondin module, complete cds Length = 2815 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 gtgcagcccacagaaaatatgtga 102 |||||||||||||||| ||||||| Sbjct: 2677 gtgcagcccacagaaagtatgtga 2654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,836,930 Number of Sequences: 3902068 Number of extensions: 3836930 Number of successful extensions: 66183 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65952 Number of HSP's gapped (non-prelim): 220 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
