ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, c... 200 4e-48
2gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence 113 8e-22
3gb|AY103864.1| Zea mays PCO154745 mRNA sequence 113 8e-22
4gb|AF180143.1|AF180143 Glycine max ubiquitin carrier protein 4 (... 101 3e-18
5gb|AY111755.1| Zea mays CL20312_1 mRNA sequence 66 2e-07
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 58 4e-05
7gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 58 4e-05
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
9ref|NM_196743.1| Oryza sativa (japonica cultivar-group) putative... 54 6e-04
10emb|X71381.1|ATUBC6 A.thaliana gene for ubiquitin carrier protein 54 6e-04
11gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map... 54 6e-04
12gb|L19355.1|ATHUBIQUE Arabidopsis thaliana ubiquitin conjugating... 54 6e-04
13dbj|AK120481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
14dbj|AK066993.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
15ref|NM_130166.2| Arabidopsis thaliana UBC6 (UBIQUITIN-CONJUGATIN... 48 0.038
16gb|AY299213.1| Schizolobium parahybum clone Sp4 microsatellite s... 48 0.038
17emb|BX819316.1|CNS0A9TY Arabidopsis thaliana Full-length cDNA Co... 48 0.038
18emb|BX821930.1|CNS0A94H Arabidopsis thaliana Full-length cDNA Co... 48 0.038
19gb|BT005208.1| Arabidopsis thaliana At2g46030 mRNA, complete cds 48 0.038
20gb|DQ027021.1| Arabidopsis thaliana ubiquitinating enzyme (At2g4... 48 0.038
21gb|AY812115.1| Schistosoma japonicum SJCHGC06371 protein mRNA, p... 46 0.15
22ref|XM_707872.1| Candida albicans SC5314 ubiquitin-conjugating e... 44 0.60
23ref|XM_707778.1| Candida albicans SC5314 ubiquitin-conjugating e... 44 0.60
24emb|Z83823.1|HS394F12 Human DNA sequence from clone RP3-394F12 o... 44 0.60
25gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog... 42 2.4
26gb|AC144796.2| Mus musculus BAC clone RP24-397M4 from chromosome... 42 2.4
27gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome... 42 2.4
28gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complet... 42 2.4
29emb|AL589990.9| Human DNA sequence from clone RP11-109M16 on chr... 42 2.4
30gb|AC146055.4| Pan troglodytes BAC clone RP43-80G9 from chromoso... 42 2.4
31gb|AC091489.4| Homo sapiens chromosome 16 clone RP11-164A6, comp... 42 2.4
32gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12... 42 2.4
33gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24... 42 2.4
34dbj|AP000889.6| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.4
35emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, ... 42 2.4
36gb|DQ294964.1| Weissella cibaria strain Uga69 16S rRNA gene, com... 42 2.4
37gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HB... 42 2.4
38gb|DQ138714.1| Drosophila yakuba strain T33 CG2257 gene, partial... 42 2.4
39gb|L19356.1|ATHUBIQUF Arabidopsis thaliana ubiquitin conjugating... 42 2.4
40gb|AC166253.18| Mus musculus BAC RP23-231M6 (Roswell Park Cance... 40 9.3
41ref|NM_105055.2| Arabidopsis thaliana ubiquitin conjugating enzy... 40 9.3
42ref|NM_126630.1| Arabidopsis thaliana AtGRF6 (GROWTH-REGULATING ... 40 9.3
43gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, com... 40 9.3
44gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 9.3
45gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, comp... 40 9.3
46gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, comp... 40 9.3
47ref|XM_387206.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 9.3
48ref|XM_650980.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.3
49emb|CR718355.2|CNS0GH89 Tetraodon nigroviridis full-length cDNA 40 9.3
50gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, compl... 40 9.3
51emb|CR714770.2|CNS0GEGU Tetraodon nigroviridis full-length cDNA 40 9.3
52emb|CR712115.2|CNS0GCF3 Tetraodon nigroviridis full-length cDNA 40 9.3
53emb|CR706656.2|CNS0G87G Tetraodon nigroviridis full-length cDNA 40 9.3
54emb|CR684347.2|CNS0FQZR Tetraodon nigroviridis full-length cDNA 40 9.3
55emb|BX546457.1| Human DNA sequence from clone RP11-29O12 on chro... 40 9.3
56emb|AL513476.4| Human DNA sequence from clone CTD-2335J1 on chro... 40 9.3
57gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5... 40 9.3
58emb|AL357075.17| Human DNA sequence from clone RP11-486M3 on chr... 40 9.3
59emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on ch... 40 9.3
60emb|AL159152.11| Human DNA sequence from clone RP11-165N12 on ch... 40 9.3
61emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K... 40 9.3
62emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C... 40 9.3
63gb|AF525766.1| Trypanosoma cruzi unknown genes 40 9.3
64gb|AY114061.1| Arabidopsis thaliana putative E2, ubiquitin-conju... 40 9.3
65gb|AY074347.1| Arabidopsis thaliana putative E2, ubiquitin-conju... 40 9.3
66gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 40 9.3
67emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, c... 40 9.3
68emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chro... 40 9.3
69gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8 40 9.3
70gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ... 40 9.3
71gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 40 9.3
72gb|AC002412.3| Homo sapiens chromosome X clone bWXD105, complete... 40 9.3
73gb|AC096638.2| Homo sapiens chromosome 1 clone RP11-224O19, comp... 40 9.3
74gb|AY060586.1| Arabidopsis thaliana At2g06200/F5K7.4 mRNA, compl... 40 9.3
75emb|CR450364.1| Mouse DNA sequence from clone RP23-271O14 on chr... 40 9.3
76gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome... 40 9.3
77gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, com... 40 9.3
78gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, comple... 40 9.3
79emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 40 9.3
80gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q... 40 9.3
81dbj|AB006707.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 9.3
82emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C ... 40 9.3
83emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chro... 40 9.3
84gb|AC004467.1|AC004467 Homo sapiens Xp22 BAC GSHB-512P14 (Genome... 40 9.3
85gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, c... 40 9.3
86gb|DQ027020.1| Arabidopsis thaliana ubiquitinating enzyme (At1g6... 40 9.3
87emb|BX908745.12| Zebrafish DNA sequence from clone DKEY-208F1 in... 40 9.3
88dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 9.3
89gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, com... 40 9.3
90gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, com... 40 9.3
91emb|AL808106.7| Mouse DNA sequence from clone RP23-281P6 on chro... 40 9.3
92emb|AL138780.3| Human DNA sequence from clone RP5-1044P11 on chr... 40 9.3
93gb|L19354.1|ATHUBIQUD Arabidopsis thaliana ubiquitin conjugating... 40 9.3
94dbj|AB007976.1| Homo sapiens mRNA, chromosome 1 specific transcr... 40 9.3 
>gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, complete cds
          Length = 965

 Score =  200 bits (101), Expect = 4e-48
 Identities = 113/117 (96%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 233

                                                                    
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatac 577
           ||||||||||||| || || |||||||| ||||||||||||||||||||||||||||
Sbjct: 232 aagggtaagcttcggtgagttcaaccctgaccttccacacaccaccctggtaaatac 176



 Score =  186 bits (94), Expect = 6e-44
 Identities = 121/130 (93%)
 Strand = Plus / Minus

                                                                       
Query: 80  ctttgactttttgttcataggcattcttgtcgcgcatcatcagcgatgccgcctcgccat 139
           |||||||||| | ||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 472 ctttgactttattttcataggcattcttgtcgcgcatcatgagcgaagccgcctcgccgt 413

                                                                       
Query: 140 tcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaagatat 199
           |||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 412 tcaaggggtccgaggggttcgggtacaggagaagctggggcaggaacacctcaaagatat 353

                     
Query: 200 tcacaaggtc 209
           ||||||||||
Sbjct: 352 tcacaaggtc 343



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 302 caaacattgggctccaggtctggttgatcacatccaagcagaccgaacc 350
           ||||||| |||||||| ||||| |||||||||||||||||||| |||||
Sbjct: 343 caaacatcgggctccatgtctgattgatcacatccaagcagacagaacc 295
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>gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence
          Length = 789

 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||||||||||||||| |||||||| ||||||||| ||||||| ||||| ||||||||||
Sbjct: 297 acatctcatcgacattcgggtgataaatcttgttgatgaagccgatggacggggatttgt 238

                                                                    
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatac 577
           ||||||| || |||| ||| || ||||  |||||||| |||||||| ||||| ||||
Sbjct: 237 aagggtatgcatcaggcagttctacccgaaccttccagacaccaccttggtagatac 181



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 302 caaacattgggctccaggtctggttgatcacatccaagcagac 344
           |||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 348 caaacattgggctccatgtctggtttatgacatccaaacagac 306
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>gb|AY103864.1| Zea mays PCO154745 mRNA sequence
          Length = 906

 Score =  113 bits (57), Expect = 8e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||||||||||||||| |||||||| ||||||||| ||||||| ||||| ||||||||||
Sbjct: 434 acatctcatcgacattcgggtgataaatcttgttgatgaagccgatggacggggatttgt 375

                                                                    
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatac 577
           ||||||| || |||| ||| || ||||  |||||||| |||||||| ||||| ||||
Sbjct: 374 aagggtatgcatcaggcagttctacccgaaccttccagacaccaccttggtagatac 318



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 302 caaacattgggctccaggtctggttgatcacatccaagcagac 344
           |||||||||||||||| |||||||| || |||||||| |||||
Sbjct: 485 caaacattgggctccatgtctggtttatgacatccaaacagac 443
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>gb|AF180143.1|AF180143 Glycine max ubiquitin carrier protein 4 (UBC4) mRNA, complete cds
          Length = 757

 Score =  101 bits (51), Expect = 3e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||||||||| ||||| |||||||||||||| ||| | ||||| |||||||| ||||| |
Sbjct: 257 acatctcatcaacatttgggtgatagatcttattgataaagcctatggaaggagatttat 198

                                                      
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacacc 563
           |||| ||||| || | ||||||||||||||| |||||||||||
Sbjct: 197 aaggataagcatctggcagctcaaccctcactttccacacacc 155
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>gb|AY111755.1| Zea mays CL20312_1 mRNA sequence
          Length = 907

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                            
Query: 302 caaacattgggctccaggtctggttgatcacatccaagcagaccgaacc 350
           |||||||||||||||| ||||||||||| |||||||| ||||| |||||
Sbjct: 399 caaacattgggctccatgtctggttgatgacatccaaacagactgaacc 351



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||| ||||||||||| |||||||| ||||| ||| |||| ||||| || ||||||||||
Sbjct: 348 acatttcatcgacatttgggtgatatatcttattgatgaaaccaatcgatggggatttgt 289

               
Query: 521 aagg 524
           ||||
Sbjct: 288 aagg 285
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 300      accaaacattgggctccaggtctggttgatcacatccaagcagaccgaaccggacct 356
                |||||||||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 15667752 accaaacattgggctccacgtctggttaatgacatccaaacacacagaaccagacct 15667696



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                            
Query: 461      acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
                |||| ||||| ||||| || ||||| ||||||||   ||| ||||| || || |||||||
Sbjct: 15667606 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 15667547

                                                                            
Query: 521      aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatacctg 580
                |||| || || |||| ||  || || || |||||||| |||||||| || ||||||||||
Sbjct: 15667546 aaggatatgcatcaggcaattctactctaaccttccagacaccaccttgataaatacctg 15667487

                 
Query: 581      c 581
                |
Sbjct: 15667486 c 15667486
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>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
              complete sequence
          Length = 193119

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                       
Query: 300    accaaacattgggctccaggtctggttgatcacatccaagcagaccgaaccggacct 356
              |||||||||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 155118 accaaacattgggctccacgtctggttaatgacatccaaacacacagaaccagacct 155062



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                          
Query: 461    acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
              |||| ||||| ||||| || ||||| ||||||||   ||| ||||| || || |||||||
Sbjct: 154972 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 154913

                                                                          
Query: 521    aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatacctg 580
              |||| || || |||| ||  || || || |||||||| |||||||| || ||||||||||
Sbjct: 154912 aaggatatgcatcaggcaattctactctaaccttccagacaccaccttgataaatacctg 154853

               
Query: 581    c 581
              |
Sbjct: 154852 c 154852
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                         
Query: 300      accaaacattgggctccaggtctggttgatcacatccaagcagaccgaaccggacct 356
                |||||||||||||||||| |||||||| || |||||||| || || ||||| |||||
Sbjct: 15675993 accaaacattgggctccacgtctggttaatgacatccaaacacacagaaccagacct 15675937



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 97/121 (80%)
 Strand = Plus / Minus

                                                                            
Query: 461      acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
                |||| ||||| ||||| || ||||| ||||||||   ||| ||||| || || |||||||
Sbjct: 15675847 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 15675788

                                                                            
Query: 521      aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatacctg 580
                |||| || || |||| ||  || || || |||||||| |||||||| || ||||||||||
Sbjct: 15675787 aaggatatgcatcaggcaattctactctaaccttccagacaccaccttgataaatacctg 15675728

                 
Query: 581      c 581
                |
Sbjct: 15675727 c 15675727
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>ref|NM_196743.1| Oryza sativa (japonica cultivar-group) putative acetohydroxyacid
           isomeroreductase (OSJNBa0094K20.18), mRNA
          Length = 588

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 300 accaaacattgggctccaggtctggttgatcacatccaa 338
           |||||||||||||||||| |||||||| || ||||||||
Sbjct: 294 accaaacattgggctccacgtctggttaatgacatccaa 256



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||| ||||| ||||| || ||||| ||||||||   ||| ||||| || || |||||||
Sbjct: 241 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 182

                                                                    
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatac 577
           |||| || || |||| ||  || || || |||||||| |||||||| || |||||||
Sbjct: 181 aaggatatgcatcaggcaattctactctaaccttccagacaccaccttgataaatac 125
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>emb|X71381.1|ATUBC6 A.thaliana gene for ubiquitin carrier protein
          Length = 1548

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 299  taccaaacattgggctccaggtctggttgatcacatccaagca 341
            ||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 1047 taccaaacattgggctccaagtctggtttataacatctaagca 1005



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 873 tcatcgacattagggtgataaatcttgttg 844
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>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
             sequence
          Length = 110149

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 299   taccaaacattgggctccaggtctggttgatcacatccaagca 341
             ||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 90913 taccaaacattgggctccaagtctggtttataacatctaagca 90871



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 466   tcatcgacattggggtgatagatcttgttg 495
             ||||||||||| |||||||| |||||||||
Sbjct: 90739 tcatcgacattagggtgataaatcttgttg 90710
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>gb|L19355.1|ATHUBIQUE Arabidopsis thaliana ubiquitin conjugating enzyme (UBC6) gene,
            complete cds
          Length = 1987

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 299  taccaaacattgggctccaggtctggttgatcacatccaagca 341
            ||||||||||||||||||| |||||||| || ||||| |||||
Sbjct: 1486 taccaaacattgggctccaagtctggtttataacatctaagca 1444



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 466  tcatcgacattggggtgatagatcttgttg 495
            ||||||||||| |||||||| |||||||||
Sbjct: 1312 tcatcgacattagggtgataaatcttgttg 1283
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>dbj|AK120481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112B17, full
           insert sequence
          Length = 579

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 302 caaacattgggctccaggtctggttgatcacatccaa 338
           |||||||||||||||| |||||||| || ||||||||
Sbjct: 465 caaacattgggctccacgtctggttaatgacatccaa 429
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>dbj|AK066993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F02, full
           insert sequence
          Length = 3411

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 302 caaacattgggctccaggtctggttgatcacatccaa 338
           |||||||||||||||| |||||||| || ||||||||
Sbjct: 497 caaacattgggctccacgtctggttaatgacatccaa 461



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                       
Query: 461 acatctcatcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgt 520
           |||| ||||| ||||| || ||||| ||||||||   ||| ||||| || || |||||||
Sbjct: 446 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 387

                                                                    
Query: 521 aagggtaagcttcagtcagctcaaccctcaccttccacacaccaccctggtaaatac 577
           |||| || || |||| ||  || || || |||||||| |||||||| || |||||||
Sbjct: 386 aaggatatgcatcaggcaattctactctaaccttccagacaccaccttgataaatac 330
to top
>ref|NM_130166.2| Arabidopsis thaliana UBC6 (UBIQUITIN-CONJUGATING ENZYME 6);
           ubiquitin conjugating enzyme AT2G46030 (UBC6) mRNA,
           complete cds
          Length = 1482

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 302 caaacattgggctccaggtctggttgatcacatccaagca 341
           |||||||||||||||| |||||||| || ||||| |||||
Sbjct: 370 caaacattgggctccaagtctggtttataacatctaagca 331



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 314 tcatcgacattagggtgataaatcttgttg 285
to top
>gb|AY299213.1| Schizolobium parahybum clone Sp4 microsatellite sequence
          Length = 661

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 298 ttaccaaacattgggctccaggtctggttgatcacatccaagca 341
           ||||||||||| || |||||||||||||| || ||||| |||||
Sbjct: 174 ttaccaaacatgggactccaggtctggttaataacatctaagca 217
to top
>emb|BX819316.1|CNS0A9TY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 661

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 302 caaacattgggctccaggtctggttgatcacatccaagca 341
           |||||||||||||||| |||||||| || ||||| |||||
Sbjct: 190 caaacattgggctccaagtctggtttataacatctaagca 151



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 134 tcatcgacattagggtgataaatcttgttg 105
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>emb|BX821930.1|CNS0A94H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL85ZE12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 745

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 302 caaacattgggctccaggtctggttgatcacatccaagca 341
           |||||||||||||||| |||||||| || ||||| |||||
Sbjct: 343 caaacattgggctccaagtctggtttataacatctaagca 304



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 287 tcatcgacattagggtgataaatcttgttg 258
to top
>gb|BT005208.1| Arabidopsis thaliana At2g46030 mRNA, complete cds
          Length = 552

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 302 caaacattgggctccaggtctggttgatcacatccaagca 341
           |||||||||||||||| |||||||| || ||||| |||||
Sbjct: 292 caaacattgggctccaagtctggtttataacatctaagca 253



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 236 tcatcgacattagggtgataaatcttgttg 207
to top
>gb|DQ027021.1| Arabidopsis thaliana ubiquitinating enzyme (At2g46030) mRNA,
           complete cds
          Length = 552

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 302 caaacattgggctccaggtctggttgatcacatccaagca 341
           |||||||||||||||| |||||||| || ||||| |||||
Sbjct: 292 caaacattgggctccaagtctggtttataacatctaagca 253



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 466 tcatcgacattggggtgatagatcttgttg 495
           ||||||||||| |||||||| |||||||||
Sbjct: 236 tcatcgacattagggtgataaatcttgttg 207
to top
>gb|AY812115.1| Schistosoma japonicum SJCHGC06371 protein mRNA, partial cds
          Length = 645

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 197 tattcacaaggtctgcagcagca 219
           |||||||||||||||||||||||
Sbjct: 283 tattcacaaggtctgcagcagca 305
to top
>ref|XM_707872.1| Candida albicans SC5314 ubiquitin-conjugating enzyme (CaO19.4540),
           mRNA
          Length = 573

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 481 tgatagatcttgttggtgaagccaatggaaggggattt 518
           |||||||| |||||||| || ||||||||||| |||||
Sbjct: 221 tgatagattttgttggtaaacccaatggaaggcgattt 184
to top
>ref|XM_707778.1| Candida albicans SC5314 ubiquitin-conjugating enzyme (CaO19.12015),
           mRNA
          Length = 573

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 481 tgatagatcttgttggtgaagccaatggaaggggattt 518
           |||||||| |||||||| || ||||||||||| |||||
Sbjct: 221 tgatagattttgttggtaaacccaatggaaggcgattt 184
to top
>emb|Z83823.1|HS394F12 Human DNA sequence from clone RP3-394F12 on chromosome X Contains the
             5' end of the ODZ1 gene for odd odd Oz/ten-m homolog
             1(Drosophila), complete sequence
          Length = 109279

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 356   tgaacaaatggacggatggata 377
             ||||||||||||||||||||||
Sbjct: 44801 tgaacaaatggacggatggata 44780
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>gb|AY623111.1| Homo sapiens CDC14 cell division cycle 14 homolog A (S. cerevisiae)
              (CDC14A) gene, complete cds
          Length = 170869

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 438    agatgaagaagaaagaaaggg 458
              |||||||||||||||||||||
Sbjct: 158426 agatgaagaagaaagaaaggg 158406
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>gb|AC144796.2| Mus musculus BAC clone RP24-397M4 from chromosome 7, complete
            sequence
          Length = 140189

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 438  agatgaagaagaaagaaaggg 458
            |||||||||||||||||||||
Sbjct: 4645 agatgaagaagaaagaaaggg 4625
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>gb|AC132619.3| Mus musculus BAC clone RP23-195N4 from chromosome 7, complete sequence
          Length = 193890

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 438    agatgaagaagaaagaaaggg 458
              |||||||||||||||||||||
Sbjct: 124981 agatgaagaagaaagaaaggg 124961
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>gb|AC073111.8| Homo sapiens BAC clone RP11-511P7 from 7, complete sequence
          Length = 115003

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 275   cacgagtatcagatttattgatttt 299
             ||||||| |||||||||||||||||
Sbjct: 40963 cacgagtttcagatttattgatttt 40987
to top
>emb|AL589990.9| Human DNA sequence from clone RP11-109M16 on chromosome 1, complete
             sequence
          Length = 53890

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 438   agatgaagaagaaagaaaggg 458
             |||||||||||||||||||||
Sbjct: 41759 agatgaagaagaaagaaaggg 41739
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>gb|AC146055.4| Pan troglodytes BAC clone RP43-80G9 from chromosome 7, complete
             sequence
          Length = 184851

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 275   cacgagtatcagatttattgatttt 299
             ||||||| |||||||||||||||||
Sbjct: 91599 cacgagtttcagatttattgatttt 91575
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>gb|AC091489.4| Homo sapiens chromosome 16 clone RP11-164A6, complete sequence
          Length = 150214

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 356   tgaacaaatggacggatggat 376
             |||||||||||||||||||||
Sbjct: 56298 tgaacaaatggacggatggat 56318
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>gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12P18 genomic sequence, complete
             sequence
          Length = 79469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 299   taccaaacattgggctccaggtctggttgatcacatc 335
             |||| ||||| ||||||||||||||||| || |||||
Sbjct: 72404 taccgaacatcgggctccaggtctggttaataacatc 72368
to top
>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence,
           complete sequence
          Length = 87575

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 299 taccaaacattgggctccaggtctggttgatcacatc 335
           |||| ||||| ||||||||||||||||| || |||||
Sbjct: 472 taccgaacatcgggctccaggtctggttaataacatc 436
to top
>dbj|AP000889.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-101M8, complete
             sequence
          Length = 163047

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   agtatcagatttattgatttt 299
             |||||||||||||||||||||
Sbjct: 93620 agtatcagatttattgatttt 93640
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>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence
          Length = 157088

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 362  aatggacggatggatacatgatgaa 386
            |||||| ||||||||||||||||||
Sbjct: 4836 aatggatggatggatacatgatgaa 4812
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>gb|DQ294964.1| Weissella cibaria strain Uga69 16S rRNA gene, complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 166  aggagaagctggggcaggaacacctcaaa 194
            ||||||| ||| |||||||||||||||||
Sbjct: 1533 aggagaacctgcggcaggaacacctcaaa 1561
to top
>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
              sequence
          Length = 141216

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 298    ttaccaaacattgggctccaggtctggttgatcacatccaa 338
              ||||||||||| |||||||| | ||| ||||| ||||||||
Sbjct: 138877 ttaccaaacatagggctccatgactgattgatgacatccaa 138837
to top
>gb|DQ138714.1| Drosophila yakuba strain T33 CG2257 gene, partial cds
          Length = 510

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 314 tccaggtctggttgatcacatccaagcagaccg 346
           |||||| ||| ||||||||||||||||| ||||
Sbjct: 265 tccaggcctgattgatcacatccaagcacaccg 233
to top
>gb|L19356.1|ATHUBIQUF Arabidopsis thaliana ubiquitin conjugating enzyme (UBC5) gene,
            complete cds
          Length = 1888

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 299  taccaaacattgggctccaggtctggttgatcacatc 335
            |||| ||||| ||||||||||||||||| || |||||
Sbjct: 1253 taccgaacatcgggctccaggtctggttaataacatc 1217
to top
>gb|AC166253.18| Mus musculus  BAC RP23-231M6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207999

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   tataaaagctcaaagtccac 277
             ||||||||||||||||||||
Sbjct: 83523 tataaaagctcaaagtccac 83504
to top
>ref|NM_105055.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G63800 mRNA, complete cds
          Length = 907

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 304 aacattgggctccaggtctggttgatcacatc 335
           ||||| ||||||||||||||||| || |||||
Sbjct: 367 aacatcgggctccaggtctggttaataacatc 336
to top
>ref|NM_126630.1| Arabidopsis thaliana AtGRF6 (GROWTH-REGULATING FACTOR 6) AT2G06200
           (AtGRF6) mRNA, complete cds
          Length = 872

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 agagagatgaagaagaaaga 453
           ||||||||||||||||||||
Sbjct: 53  agagagatgaagaagaaaga 34
to top
>gb|AC131909.8| Mus musculus chromosome 5, clone RP24-250G11, complete sequence
          Length = 145479

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ggagaagctggggcaggaac 186
             ||||||||||||||||||||
Sbjct: 67414 ggagaagctggggcaggaac 67433
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 345    cgaaccggacctgaacaaatggacggat 372
              |||||||||||||  |||||||||||||
Sbjct: 105305 cgaaccggacctggccaaatggacggat 105332
to top
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence
          Length = 190200

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   ggagaagctggggcaggaac 186
             ||||||||||||||||||||
Sbjct: 20091 ggagaagctggggcaggaac 20110
to top
>gb|AC146199.2| Pan troglodytes BAC clone RP43-25F11 from 7, complete sequence
          Length = 186750

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   aagcaaacagaacaaccctg 604
             ||||||||||||||||||||
Sbjct: 86938 aagcaaacagaacaaccctg 86919
to top
>ref|XM_387206.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07030.1)
           partial mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 202 acaaggtctgcagcagcagc 221
           ||||||||||||||||||||
Sbjct: 73  acaaggtctgcagcagcagc 92
to top
>ref|XM_650980.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (18.t00069)
            partial mRNA
          Length = 1803

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 434  agagagatgaagaagaaaga 453
            ||||||||||||||||||||
Sbjct: 1229 agagagatgaagaagaaaga 1248
to top
>emb|CR718355.2|CNS0GH89 Tetraodon nigroviridis full-length cDNA
          Length = 998

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaggtctgcagcagcagcac 223
           ||||||||||||||||||||
Sbjct: 653 aaggtctgcagcagcagcac 634
to top
>gb|AC146141.2| Pan troglodytes BAC clone RP43-3A23 from 7, complete sequence
          Length = 182547

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 440    atgaagaagaaagaaagggt 459
              ||||||||||||||||||||
Sbjct: 105935 atgaagaagaaagaaagggt 105916
to top
>emb|CR714770.2|CNS0GEGU Tetraodon nigroviridis full-length cDNA
          Length = 603

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaggtctgcagcagcagcac 223
           ||||||||||||||||||||
Sbjct: 342 aaggtctgcagcagcagcac 323
to top
>emb|CR712115.2|CNS0GCF3 Tetraodon nigroviridis full-length cDNA
          Length = 561

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaggtctgcagcagcagcac 223
           ||||||||||||||||||||
Sbjct: 293 aaggtctgcagcagcagcac 274
to top
>emb|CR706656.2|CNS0G87G Tetraodon nigroviridis full-length cDNA
          Length = 823

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaggtctgcagcagcagcac 223
           ||||||||||||||||||||
Sbjct: 559 aaggtctgcagcagcagcac 540
to top
>emb|CR684347.2|CNS0FQZR Tetraodon nigroviridis full-length cDNA
          Length = 564

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 204 aaggtctgcagcagcagcac 223
           ||||||||||||||||||||
Sbjct: 293 aaggtctgcagcagcagcac 274
to top
>emb|BX546457.1| Human DNA sequence from clone RP11-29O12 on chromosome 1 Contains part
             of a novel gene (FLJ31487), complete sequence
          Length = 69971

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   gatgaagaagaaagaaaggg 458
             ||||||||||||||||||||
Sbjct: 37050 gatgaagaagaaagaaaggg 37069
to top
>emb|AL513476.4| Human DNA sequence from clone CTD-2335J1 on chromosome X, complete
             sequence
          Length = 18889

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 80    ctttgactttttgttcatag 99
             ||||||||||||||||||||
Sbjct: 17738 ctttgactttttgttcatag 17757
to top
>gb|AE014820.1| Plasmodium falciparum 3D7 chromosome 14 section 5 of 13 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 436    agagatgaagaagaaagaaa 455
              ||||||||||||||||||||
Sbjct: 187059 agagatgaagaagaaagaaa 187040
to top
>emb|AL357075.17| Human DNA sequence from clone RP11-486M3 on chromosome 6 Contains the
              gene for similar to maguin-2; maguin-1 (LOC154043,
              FLJ31349) and a novel pseudogene. Contains a CpG island,
              complete sequence
          Length = 178461

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 447    agaaagaaagggttacatct 466
              ||||||||||||||||||||
Sbjct: 113480 agaaagaaagggttacatct 113461
to top
>emb|AL353572.13| Human DNA sequence from clone RP11-350E12 on chromosome 9 Contains the
             gene for cell cycle related kinase (CCRK,CDCH), two novel
             pseudogenes, a 40S ribosomal protein S10 pseudogene
             (RPS10P3), a pseudogene similar to part of a novel protein
             and two CpG islands, complete sequence
          Length = 207295

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 79    cctttgactttttgttcataggcattct 106
             ||||||||||||| || |||||||||||
Sbjct: 81462 cctttgactttttattaataggcattct 81435
to top
>emb|AL159152.11| Human DNA sequence from clone RP11-165N12 on chromosome 13q32.1-33.3
             Contains a novel gene, complete sequence
          Length = 160404

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   agagatgaagaagaaagaaa 455
             ||||||||||||||||||||
Sbjct: 50959 agagatgaagaagaaagaaa 50940
to top
>emb|AL050342.42|HSDJ655K7 Human DNA sequence from clone RP4-655K7 on chromosome 1p35.3-36.13
             Contains part of a gene encoding a novel protein,,
             complete sequence
          Length = 116857

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   ttggtgaagccaatggaagg 512
             ||||||||||||||||||||
Sbjct: 80441 ttggtgaagccaatggaagg 80460
to top
>emb|AL031705.25|HS305C8 Human DNA sequence from clone LA16c-305C8 on chromosome 16 Contains an
             RPS3A (40S ribosomal protein S3A) pseudogene, part of the
             gene for a novel protein similar to NPTX1 (neuronal
             pentraxin I), the gene DFKZP434A073 or KIAA0683 and the
             last exon of gene KIAA0590. Contains ESTs, STSs, GSSs and
             eight putative CpG islands, complete sequence
          Length = 42569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   ttgggctccaggtctggttg 327
             ||||||||||||||||||||
Sbjct: 21660 ttgggctccaggtctggttg 21679
to top
>gb|AF525766.1| Trypanosoma cruzi unknown genes
          Length = 30095

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 577   cctgcagcaagcaaacagaa 596
             ||||||||||||||||||||
Sbjct: 27614 cctgcagcaagcaaacagaa 27633
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>gb|AY114061.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5
           (At1g63800) mRNA, complete cds
          Length = 589

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 304 aacattgggctccaggtctggttgatcacatc 335
           ||||| ||||||||||||||||| || |||||
Sbjct: 290 aacatcgggctccaggtctggttaataacatc 259
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>gb|AY074347.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5
           (At1g63800) mRNA, complete cds
          Length = 915

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 304 aacattgggctccaggtctggttgatcacatc 335
           ||||| ||||||||||||||||| || |||||
Sbjct: 369 aacatcgggctccaggtctggttaataacatc 338
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>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 436     agagatgaagaagaaagaaa 455
               ||||||||||||||||||||
Sbjct: 1339296 agagatgaagaagaaagaaa 1339315
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>emb|CR628395.7| Zebrafish DNA sequence from clone DKEY-165E24, complete sequence
          Length = 250797

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    gctccaggtctggttgatca 331
              ||||||||||||||||||||
Sbjct: 132692 gctccaggtctggttgatca 132673
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>emb|AL669928.8| Mouse DNA sequence from clone RP23-76F22 on chromosome 11 Contains a
             pseudogene similar to part of a member of the tropomyosin
             gene family, complete sequence
          Length = 100326

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 437   gagatgaagaagaaagaaagggttacat 464
             ||||||||||||| ||||||| ||||||
Sbjct: 65787 gagatgaagaagacagaaaggattacat 65760
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>gb|AE006467.1| Homo sapiens 16p13.3 sequence section 6 of 8
          Length = 279011

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    ttgggctccaggtctggttg 327
              ||||||||||||||||||||
Sbjct: 163923 ttgggctccaggtctggttg 163942
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>gb|AC006413.4| Arabidopsis thaliana chromosome 2 clone F5K7 map ve013, complete
             sequence
          Length = 106716

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   agagagatgaagaagaaaga 453
             ||||||||||||||||||||
Sbjct: 15301 agagagatgaagaagaaaga 15320
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>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    aaaacagacctttgactttt 90
             ||||||||||||||||||||
Sbjct: 54403 aaaacagacctttgactttt 54384
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>gb|AC002412.3| Homo sapiens chromosome X clone bWXD105, complete sequence
          Length = 121623

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 585  aagcaaacagaacaaccctg 604
            ||||||||||||||||||||
Sbjct: 5211 aagcaaacagaacaaccctg 5192
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>gb|AC096638.2| Homo sapiens chromosome 1 clone RP11-224O19, complete sequence
          Length = 185784

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   atataaaagctcaaagtcca 276
             ||||||||||||||||||||
Sbjct: 44134 atataaaagctcaaagtcca 44153
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>gb|AY060586.1| Arabidopsis thaliana At2g06200/F5K7.4 mRNA, complete cds
          Length = 873

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 434 agagagatgaagaagaaaga 453
           ||||||||||||||||||||
Sbjct: 53  agagagatgaagaagaaaga 34
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>emb|CR450364.1| Mouse DNA sequence from clone RP23-271O14 on chromosome 4, complete
            sequence
          Length = 24029

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 440  atgaagaagaaagaaagggt 459
            ||||||||||||||||||||
Sbjct: 4131 atgaagaagaaagaaagggt 4150
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>gb|AC154172.4| Mus musculus BAC clone RP23-429K7 from chromosome 18, complete sequence
          Length = 209529

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   gaggagaagctggggcagga 184
             ||||||||||||||||||||
Sbjct: 46449 gaggagaagctggggcagga 46468
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>gb|AC068228.8| Homo sapiens chromosome 8, clone RP11-539E17, complete sequence
          Length = 200622

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaaacagacctttgactttt 90
              ||||||||||||||||||||
Sbjct: 180262 aaaacagacctttgactttt 180281
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>gb|AC023108.4| Homo sapiens BAC clone RP11-121I13 from 2, complete sequence
          Length = 173794

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 440   atgaagaagaaagaaagggt 459
             ||||||||||||||||||||
Sbjct: 19179 atgaagaagaaagaaagggt 19160
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
              complete sequence
          Length = 209195

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    agcagagagatgaagaagaa 450
              ||||||||||||||||||||
Sbjct: 113604 agcagagagatgaagaagaa 113585
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>gb|AC104430.3| Homo sapiens chromosome 8 clone RP11-391E1 map 8q24.2, complete sequence
          Length = 170376

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     aaaacagacctttgactttt 90
              ||||||||||||||||||||
Sbjct: 118404 aaaacagacctttgactttt 118423
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>dbj|AB006707.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYC6
          Length = 82315

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 136   ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 195
             ||||||||||| || |||||||| || || || |||||||| || || ||   |||||| 
Sbjct: 19741 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 19800

                             
Query: 196   atattcacaaggtctg 211
             | ||||||||||||||
Sbjct: 19801 acattcacaaggtctg 19816
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>emb|CT573073.1| Kuenenia stuttgartiensis genome fragment KUST_C (3 of 5)
          Length = 893329

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 176    ggggcaggaacacctcaaagatat 199
              ||||||||||||||||||| ||||
Sbjct: 510298 ggggcaggaacacctcaaatatat 510275
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>emb|CT030740.8| Mouse DNA sequence from clone RP24-312D7 on chromosome 17, complete
              sequence
          Length = 215154

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    gacattggggtgatagatct 490
              ||||||||||||||||||||
Sbjct: 212842 gacattggggtgatagatct 212861
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>gb|AC004467.1|AC004467 Homo sapiens Xp22 BAC GSHB-512P14 (Genome Systems Human BAC
           library) complete sequence
          Length = 73401

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 431 agcagagagatgaagaagaaagaa 454
           |||||| |||||||||||||||||
Sbjct: 890 agcagaaagatgaagaagaaagaa 867



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 431 agcagagagatgaagaagaaagaa 454
           |||||| |||||||||||||||||
Sbjct: 828 agcagaaagatgaagaagaaagaa 805
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>gb|AC004075.1|AC004075 Homo Sapiens Chromosome X clone bWXD90, complete sequence
          Length = 104961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   aagcaaacagaacaaccctg 604
             ||||||||||||||||||||
Sbjct: 19466 aagcaaacagaacaaccctg 19447
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>gb|DQ027020.1| Arabidopsis thaliana ubiquitinating enzyme (At1g63800) mRNA,
           complete cds
          Length = 558

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 304 aacattgggctccaggtctggttgatcacatc 335
           ||||| ||||||||||||||||| || |||||
Sbjct: 290 aacatcgggctccaggtctggttaataacatc 259
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>emb|BX908745.12| Zebrafish DNA sequence from clone DKEY-208F1 in linkage group 18,
            complete sequence
          Length = 81197

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 288  tttattgattttaccaaacattgg 311
            |||||| |||||||||||||||||
Sbjct: 8936 tttattaattttaccaaacattgg 8959
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>dbj|AP006356.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT06I08, TM0082b,
             complete sequence
          Length = 93398

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   tctgcagcagcagcacaaca 227
             ||||||||||||||||||||
Sbjct: 38306 tctgcagcagcagcacaaca 38325
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>gb|AC171404.5| Mus musculus chromosome 7, clone RP24-235N21, complete sequence
          Length = 146054

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   gaagaaagaaagggttacat 464
             ||||||||||||||||||||
Sbjct: 72635 gaagaaagaaagggttacat 72654
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>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence
          Length = 206095

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 246   agttagtgcacatataaaagctca 269
             |||||||||||||||||| |||||
Sbjct: 65753 agttagtgcacatataaaggctca 65776
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>emb|AL808106.7| Mouse DNA sequence from clone RP23-281P6 on chromosome 2, complete
            sequence
          Length = 201419

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 436  agagatgaagaagaaagaaa 455
            ||||||||||||||||||||
Sbjct: 7059 agagatgaagaagaaagaaa 7040
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>emb|AL138780.3| Human DNA sequence from clone RP5-1044P11 on chromosome 1 Contains STSs
             and GSSs, complete sequence
          Length = 85175

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 439   gatgaagaagaaagaaaggg 458
             ||||||||||||||||||||
Sbjct: 51091 gatgaagaagaaagaaaggg 51110
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>gb|L19354.1|ATHUBIQUD Arabidopsis thaliana ubiquitin conjugating enzyme (UBC4) gene,
            complete cds and flanking regions
          Length = 2278

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                        
Query: 136  ccattcaatgggtccgatgggttagggtagaggagaagctggggcaggaacacctcaaag 195
            ||||||||||| || |||||||| || || || |||||||| || || ||   |||||| 
Sbjct: 1513 ccattcaatggatctgatgggtttggatacagaagaagctgaggaagaaatgtctcaaac 1454

                            
Query: 196  atattcacaaggtctg 211
            | ||||||||||||||
Sbjct: 1453 acattcacaaggtctg 1438
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>dbj|AB007976.1| Homo sapiens mRNA, chromosome 1 specific transcript KIAA0507
          Length = 5617

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  atataaaagctcaaagtcca 276
            ||||||||||||||||||||
Sbjct: 4404 atataaaagctcaaagtcca 4423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,100,796
Number of Sequences: 3902068
Number of extensions: 8100796
Number of successful extensions: 178778
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 178414
Number of HSP's gapped (non-prelim): 357
length of query: 682
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 659
effective length of database: 17,143,297,704
effective search space: 11297433186936
effective search space used: 11297433186936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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