ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group... 186 4e-44
2ref|XM_483846.1| Oryza sativa (japonica cultivar-group), mRNA 186 4e-44
3dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
4dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
6dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 167 4e-38
7dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds 159 9e-36
8gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 u... 52 0.002
9emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9 46 0.097
10gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete se... 44 0.38
11gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete se... 44 0.38
12emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 44 0.38
13dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds 44 0.38
14gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosom... 42 1.5
15gb|AY389579.1| Hyacinthus orientalis unknown mRNA 42 1.5
16emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in... 42 1.5
17emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L... 42 1.5
18dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds 42 1.5
19dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950 42 1.5
20ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 ... 40 6.0
21gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, com... 40 6.0
22gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, co... 40 6.0
23gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete... 40 6.0
24gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, comp... 40 6.0
25gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 40 6.0
26gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosom... 40 6.0
27gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete... 40 6.0
28gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 6.0
29emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 6.0
30emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19... 40 6.0
31emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chr... 40 6.0
32gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, co... 40 6.0
33gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome... 40 6.0
34gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 40 6.0
35gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, r... 40 6.0
36gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome... 40 6.0
37gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, compl... 40 6.0
38gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 6.0
39gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 redu... 40 6.0
40gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, compl... 40 6.0
41gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 40 6.0
42gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97... 40 6.0
43gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 6.0
44emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 6.0
45gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, com... 40 6.0
46emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 40 6.0 
>ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0044E16.27
           mRNA
          Length = 886

 Score =  186 bits (94), Expect = 4e-44
 Identities = 119/126 (94%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 490 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 431

                                                                       
Query: 374 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctggggagtgcagcgcgat 433
           |||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 430 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacct-gcgagtgcagcgcgat 372

                 
Query: 434 ggcctt 439
           ||||||
Sbjct: 371 ggcctt 366
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>ref|XM_483846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 760

 Score =  186 bits (94), Expect = 4e-44
 Identities = 119/126 (94%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 443

                                                                       
Query: 374 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctggggagtgcagcgcgat 433
           |||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 442 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacct-gcgagtgcagcgcgat 384

                 
Query: 434 ggcctt 439
           ||||||
Sbjct: 383 ggcctt 378
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>dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J23, full
           insert sequence
          Length = 886

 Score =  186 bits (94), Expect = 4e-44
 Identities = 119/126 (94%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 490 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 431

                                                                       
Query: 374 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctggggagtgcagcgcgat 433
           |||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 430 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacct-gcgagtgcagcgcgat 372

                 
Query: 434 ggcctt 439
           ||||||
Sbjct: 371 ggcctt 366
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>dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A06, full
           insert sequence
          Length = 760

 Score =  186 bits (94), Expect = 4e-44
 Identities = 119/126 (94%), Gaps = 1/126 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
           |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 502 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 443

                                                                       
Query: 374 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctggggagtgcagcgcgat 433
           |||| ||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 442 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacct-gcgagtgcagcgcgat 384

                 
Query: 434 ggcctt 439
           ||||||
Sbjct: 383 ggcctt 378
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                            
Query: 314      gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
                |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 28371283 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 28371224

                                                            
Query: 374      ttggggtcagcgccgatggtcttgcagaactcggtgatcacctg 417
                |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 28371223 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctg 28371180



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 420      gagtgcagcgcgatggcctt 439
                ||||||||||||||||||||
Sbjct: 28370988 gagtgcagcgcgatggcctt 28370969
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0044E16
          Length = 153296

 Score =  167 bits (84), Expect = 4e-38
 Identities = 99/104 (95%)
 Strand = Plus / Minus

                                                                          
Query: 314    gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
              |||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 100089 gcaaggaaaccgagcttctcgccgttcttcttggcaaggcggatcaagccctgcctctgc 100030

                                                          
Query: 374    ttggggtcagcgccgatggtcttgcagaactcggtgatcacctg 417
              |||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 100029 ttggcgtcggcgccgatggtcttgcagaactcggtgatcacctg 99986



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   gagtgcagcgcgatggcctt 439
             ||||||||||||||||||||
Sbjct: 99794 gagtgcagcgcgatggcctt 99775
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>dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds
          Length = 596

 Score =  159 bits (80), Expect = 9e-36
 Identities = 111/120 (92%), Gaps = 1/120 (0%)
 Strand = Plus / Minus

                                                                       
Query: 314 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgc 373
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||
Sbjct: 471 gcaaggaatccgagcttctctccgttcttcttggcgaggcggatgaggccctgccgctgc 412

                                                                       
Query: 374 ttggggtcagcgccgatggtcttgcagaactcggtgatcacctggggagtgcagcgcgat 433
           |||| ||| |||||||||||||||||||||||| |||| |||| | ||||||||||||||
Sbjct: 411 ttggagtcggcgccgatggtcttgcagaactcgttgatgacct-gcgagtgcagcgcgat 353
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>gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 unknown mRNA
          Length = 1286

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 317 aggaatccgagcttctctccgttcttcttggcgaggcggatcaagccctg 366
           ||||| || |||||||| || ||||||||||||||||| |||| ||||||
Sbjct: 545 aggaagcccagcttctcgccattcttcttggcgaggcgaatcacgccctg 496
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>emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9
          Length = 878

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 354 ggatcaagccctgcctctgcttg 376
           |||||||||||||||||||||||
Sbjct: 336 ggatcaagccctgcctctgcttg 358
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>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ctaccgctgaggccatcagtag 42
             ||||||||||||||||||||||
Sbjct: 27103 ctaccgctgaggccatcagtag 27082
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>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 21    ctaccgctgaggccatcagtag 42
             ||||||||||||||||||||||
Sbjct: 82325 ctaccgctgaggccatcagtag 82304
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>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 357    tcaagccctgcctctgcttggg 378
              ||||||||||||||||||||||
Sbjct: 173719 tcaagccctgcctctgcttggg 173698
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>dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds
          Length = 636

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 392 gtcttgcagaactcggtgatcacctg 417
           |||||||||||||| |||||||||||
Sbjct: 418 gtcttgcagaactccgtgatcacctg 393



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 317 aggaatccgagcttctctccgttcttctt 345
           |||||||| |||||||| |||||||||||
Sbjct: 493 aggaatcccagcttctccccgttcttctt 465
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>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete sequence
          Length = 204842

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 166    gtatacatacatgcatgcaat 186
              |||||||||||||||||||||
Sbjct: 150338 gtatacatacatgcatgcaat 150318
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>gb|AY389579.1| Hyacinthus orientalis unknown mRNA
          Length = 356

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 323 ccgagcttctctccgttcttcttggcgaggcggatcaagccctgcctctgctt 375
           |||||| |||||||||||||||| || |  |||||||  || |||||||||||
Sbjct: 229 ccgagcatctctccgttcttcttcgccaaccggatcagtccttgcctctgctt 177
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>emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in linkage group 5, complete
              sequence
          Length = 155542

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 53     catcatttgtccatccatcca 73
              |||||||||||||||||||||
Sbjct: 126044 catcatttgtccatccatcca 126024
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>emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L22 on chromosome 20 Contains the
             3' end of the GDAP1L1 gene for ganglioside-induced
             differentiation-associated protein 1-like 1, the R3HDML
             gene for R3HDML domain containing-like, the C20orf142
             gene, three novel genes, the 5' end of one variant of the
             HNF4A gene for hepatocyte nuclear factor 4 and two CpG
             islands, complete sequence
          Length = 131841

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    acatcatttgtccatccatcc 72
             |||||||||||||||||||||
Sbjct: 92887 acatcatttgtccatccatcc 92867
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>dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds
          Length = 660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 317 aggaatccgagcttctctccgttcttctt 345
           ||||| ||||||||||| |||||||||||
Sbjct: 474 aggaacccgagcttctccccgttcttctt 446
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>dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950
          Length = 1928

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 52  acatcatttgtccatccatcc 72
           |||||||||||||||||||||
Sbjct: 582 acatcatttgtccatccatcc 602
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>ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 transcript variant
            AT1G13220.2 mRNA, complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 192  aactccaaggaaagatagaagagc 215
            |||||||| |||||||||||||||
Sbjct: 1208 aactccaaagaaagatagaagagc 1231
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>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence
          Length = 218246

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   agtatacatacatgcatgca 184
             ||||||||||||||||||||
Sbjct: 23531 agtatacatacatgcatgca 23512
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>gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, complete sequence
          Length = 195322

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   gtatacatacatgcatgcaa 185
             ||||||||||||||||||||
Sbjct: 75284 gtatacatacatgcatgcaa 75265
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>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence
          Length = 193926

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atctcccaactccaaggaaa 204
             ||||||||||||||||||||
Sbjct: 25039 atctcccaactccaaggaaa 25058
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>gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, complete sequence
          Length = 234479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    agtatacatacatgcatgca 184
              ||||||||||||||||||||
Sbjct: 154419 agtatacatacatgcatgca 154400
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>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   agtatacatacatgcatgca 184
             ||||||||||||||||||||
Sbjct: 55796 agtatacatacatgcatgca 55815
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>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     catcatttgtccatccatcc 72
              ||||||||||||||||||||
Sbjct: 122185 catcatttgtccatccatcc 122166
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>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   agtatacatacatgcatgca 184
             ||||||||||||||||||||
Sbjct: 38637 agtatacatacatgcatgca 38618
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>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   agtatacatacatgcatgca 184
             ||||||||||||||||||||
Sbjct: 27615 agtatacatacatgcatgca 27596
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>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     atcatttgtccatccatcca 73
              ||||||||||||||||||||
Sbjct: 178267 atcatttgtccatccatcca 178286
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>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1,
             complete sequence
          Length = 114771

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   ggagaaggaaggggtgattg 304
             ||||||||||||||||||||
Sbjct: 69743 ggagaaggaaggggtgattg 69762
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>emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chromosome 11, complete
             sequence
          Length = 129196

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gtatacatacatgcatgcaa 185
             ||||||||||||||||||||
Sbjct: 71848 gtatacatacatgcatgcaa 71867
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>gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, complete sequence
          Length = 127431

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     atacatcatttgtccatccatcca 73
              ||||||||| ||||||||||||||
Sbjct: 112953 atacatcatctgtccatccatcca 112976
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>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence
          Length = 202765

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    tatacatacatgcatgcaat 186
              ||||||||||||||||||||
Sbjct: 140822 tatacatacatgcatgcaat 140841
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>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    agtatacatacatgcatgca 184
              ||||||||||||||||||||
Sbjct: 194083 agtatacatacatgcatgca 194064
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>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone
              BACR05C10, complete sequence
          Length = 174894

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    atctcccaactccaaggaaa 204
              ||||||||||||||||||||
Sbjct: 134151 atctcccaactccaaggaaa 134170
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>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence
          Length = 171391

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 167   tatacatacatgcatgcaat 186
             ||||||||||||||||||||
Sbjct: 47610 tatacatacatgcatgcaat 47629
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>gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 271    agtagaaaagggtaggagaaggaa 294
              |||||||| |||||||||||||||
Sbjct: 101863 agtagaaaggggtaggagaaggaa 101840
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    agtatacatacatgcatgca 184
              ||||||||||||||||||||
Sbjct: 115849 agtatacatacatgcatgca 115830
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>gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 reductase (CT143)
           gene, CT143-7235b allele, partial cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 tagaaaagggtaggagaagg 292
           ||||||||||||||||||||
Sbjct: 445 tagaaaagggtaggagaagg 464
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>gb|AC126275.3| Mus musculus BAC clone RP23-111N17 from 14, complete sequence
          Length = 211542

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 411   tcacctggggagtgcagcgc 430
             ||||||||||||||||||||
Sbjct: 64668 tcacctggggagtgcagcgc 64687
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   aactccaaggaaagatagaagagc 215
             |||||||| |||||||||||||||
Sbjct: 90365 aactccaaagaaagatagaagagc 90388
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>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the
             complete sequence
          Length = 222554

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atctcccaactccaaggaaa 204
             ||||||||||||||||||||
Sbjct: 23704 atctcccaactccaaggaaa 23723
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     acatcatttgtccatccatc 71
              ||||||||||||||||||||
Sbjct: 144130 acatcatttgtccatccatc 144111
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
              sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    agtatacatacatgcatgca 184
              ||||||||||||||||||||
Sbjct: 155022 agtatacatacatgcatgca 155003
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>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence
          Length = 206095

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   agtatacatacatgcatgca 184
             ||||||||||||||||||||
Sbjct: 43825 agtatacatacatgcatgca 43844
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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
              sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ggagaaggaaggggtgattg 304
              ||||||||||||||||||||
Sbjct: 162441 ggagaaggaaggggtgattg 162422


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,303,154
Number of Sequences: 3902068
Number of extensions: 4303154
Number of successful extensions: 95263
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95111
Number of HSP's gapped (non-prelim): 147
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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