Clone Name | rbasd21a04 |
---|---|
Clone Library Name | barley_pub |
>WHI3_YEAST (P34761) Protein WHI3| Length = 661 Score = 35.8 bits (81), Expect(2) = 0.020 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Frame = -2 Query: 591 VANLGQTVSERELTDVFSGCEGFIKLKMQNK-------FGAPVAFVDFKD 463 V NL +E+EL +FSG EGF +L +NK P+ FV+F D Sbjct: 542 VGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDD 591 Score = 21.2 bits (43), Expect(2) = 0.020 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = -3 Query: 461 ITVQLKALNRLQGAILHSS---SGEGMRLEYAKSRMGLR 354 ++ +AL L G L S S G+RL ++K+ +G+R Sbjct: 592 VSFATRALAELYGRQLPRSTVSSKGGIRLSFSKNPLGVR 630
>SCW1_SCHPO (O74452) Cell wall integrity protein scw1 (Strong cell wall protein| 1) Length = 561 Score = 32.0 bits (71), Expect = 1.4 Identities = 15/44 (34%), Positives = 26/44 (59%) Frame = -3 Query: 461 ITVQLKALNRLQGAILHSSSGEGMRLEYAKSRMGLRKQRDNNRS 330 I ++AL LQG L SS G+RL ++K+ +G+R ++ + Sbjct: 473 IPYAMEALKNLQGVCLSSSIKGGIRLSFSKNPLGVRSSSSSHNN 516
>CBS1_YEAST (P14066) Cytochrome b translational activator protein CBS1,| mitochondrial precursor (COB-specific translational activator protein CBS1) Length = 229 Score = 31.2 bits (69), Expect = 2.3 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = -1 Query: 472 FQGRSQFN*KP*IVSKELFYIHHLARACV*NMPNLGWACASSVII 338 F +QFN I++K YIH+L RA V NM ++ W +S+ I Sbjct: 116 FTNFNQFN----IMNKNFNYIHNLDRARVVNMDSISWLIKNSLKI 156
>MDE7_SCHPO (O59784) RNA-binding protein mde7 (Mei4-dependent protein 7)| Length = 761 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -3 Query: 446 KALNRLQGAILHSSSGEGMRLEYAKSRMGLR 354 KA+ ++QGA L G+RL Y+K+ +G+R Sbjct: 654 KAMEKMQGAALDDKIKGGIRLSYSKNPLGVR 684
>CPO_DROME (Q01617) Protein couch potato| Length = 738 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 2/31 (6%) Frame = -2 Query: 591 VANLGQTVSERELTDVFS--GCEGFIKLKMQ 505 VANLGQ VSE EL +VFS G ++KL Q Sbjct: 708 VANLGQFVSEHELKEVFSSHGNSNWLKLLHQ 738
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/46 (32%), Positives = 19/46 (41%) Frame = +3 Query: 189 HHVMQP*VLHNLTHHEQGHSTAHVRYGIGLNSIRAPAHNEHHSPLH 326 HH P H+L HH H AH + + AH+ HH H Sbjct: 104 HHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHH 149
>NADE_RHIME (Q92TY6) NH(3)-dependent NAD(+) synthetase (EC 6.3.1.5)| Length = 334 Score = 30.4 bits (67), Expect = 4.0 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 428 GDDSGLSVEL*SSLKSTNATGAPNLFCIFSFMNPSQPE 541 G DS +SV L + A GA N+FC+F N S PE Sbjct: 51 GIDSSVSVAL-----AVRAVGAKNVFCLFMPENDSDPE 83
>BAB1_DROME (Q9W0K7) Protein bric-a-brac 1| Length = 977 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +3 Query: 189 HHVMQP*VLHNLTHHEQGHSTAHVRYGIGLNSIRAPAHN---EHHSPLHLGSVIITLLAQ 359 HH Q HH+ GH AH + G G +S + + + +HH+P S + + + Sbjct: 834 HHHQQQQQQQQQQHHQGGHQVAH-KSGFGASSSSSASSSSMGQHHAPKAKSSPLRSETPR 892 Query: 360 AHPRFG 377 H G Sbjct: 893 LHSPLG 898
>NADB_NEIMB (Q9K107) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate| synthetase B) Length = 502 Score = 29.3 bits (64), Expect = 8.9 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -2 Query: 318 ESGVHCGL-VLECC*VRCHNVRARWNVLARDVLG--YAGPT 205 ESG CGL VL+C + +RAR VLA LG YA T Sbjct: 159 ESGAACGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATT 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,237,439 Number of Sequences: 219361 Number of extensions: 1566335 Number of successful extensions: 3321 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3228 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3319 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)