>gb|AY108916.1| Zea mays PCO123628 mRNA sequence
          Length = 535

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 127 tggaatcagcanagtccccggtgggtgcagcctgaagttctctttcac 174
           |||||||| ||  |||||||||||||| | ||||||||||||||||||
Sbjct: 484 tggaatcaacaaggtccccggtgggtggatcctgaagttctctttcac 531

>ref|XM_477553.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1617

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 113  tgcatggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttc 172
            |||||||||  |||||||| || ||   |||| |||||||||||||| || || ||||| 
Sbjct: 1220 tgcatggtttgtcttggaaccaacaagttccctggtgggtgcagcctaaaattttctttt 1161

                                
Query: 173  actaccatcttgaggtactt 192
            | || ||||| |||||||||
Sbjct: 1160 attatcatctcgaggtactt 1141

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                            
Query: 113      tgcatggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttc 172
                |||||||||  |||||||| || ||   |||| |||||||||||||| || || ||||| 
Sbjct: 11413542 tgcatggtttgtcttggaaccaacaagttccctggtgggtgcagcctaaaattttctttt 11413601

                                    
Query: 173      actaccatcttgaggtactt 192
                | || ||||| |||||||||
Sbjct: 11413602 attatcatctcgaggtactt 11413621



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                            
Query: 115      catggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttcac 174
                |||||||  ||| ||||||| ||  ||||| ||||| ||||||||||| || ||||| | 
Sbjct: 11358843 catggtttgtctaggaatcaacagtgtccctggtggatgcagcctgaaattttcttttat 11358902

                                    
Query: 175      taccatcttgaggtacttca 194
                || |||||| ||||| ||||
Sbjct: 11358903 tatcatcttaaggtatttca 11358922

>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446G09
          Length = 146898

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 113   tgcatggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttc 172
             |||||||||  |||||||| || ||   |||| |||||||||||||| || || ||||| 
Sbjct: 23062 tgcatggtttgtcttggaaccaacaagttccctggtgggtgcagcctaaaattttctttt 23121

                                 
Query: 173   actaccatcttgaggtactt 192
             | || ||||| |||||||||
Sbjct: 23122 attatcatctcgaggtactt 23141

>dbj|AP004346.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0656C04
          Length = 143411

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                          
Query: 113    tgcatggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttc 172
              |||||||||  |||||||| || ||   |||| |||||||||||||| || || ||||| 
Sbjct: 114053 tgcatggtttgtcttggaaccaacaagttccctggtgggtgcagcctaaaattttctttt 114112

                                  
Query: 173    actaccatcttgaggtactt 192
              | || ||||| |||||||||
Sbjct: 114113 attatcatctcgaggtactt 114132



 Score = 44.1 bits (22), Expect = 0.17
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 115   catggttnctcttggaatcagcanagtccccggtgggtgcagcctgaagttctctttcac 174
             |||||||  ||| ||||||| ||  ||||| ||||| ||||||||||| || ||||| | 
Sbjct: 59354 catggtttgtctaggaatcaacagtgtccctggtggatgcagcctgaaattttcttttat 59413

                                 
Query: 175   taccatcttgaggtacttca 194
             || |||||| ||||| ||||
Sbjct: 59414 tatcatcttaaggtatttca 59433

>gb|AC146430.4| Pan troglodytes BAC clone RP43-21F8 from 7, complete sequence
          Length = 179251

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    gtgtatcctggtgccagcaggcac 87
             |||| |||||||||||||||||||
Sbjct: 32796 gtgtgtcctggtgccagcaggcac 32819

>ref|XM_429187.1| PREDICTED: Gallus gallus similar to paralemmin-2 (LOC431635), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  tggtgccagcaggcacgctg 91
           ||||||||||||||||||||
Sbjct: 508 tggtgccagcaggcacgctg 527

>gb|AC146193.3| Pan troglodytes BAC clone CH251-483N24 from Y, complete sequence
          Length = 232304

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     ccaaacgtccacgtgtatcc 71
              ||||||||||||||||||||
Sbjct: 154398 ccaaacgtccacgtgtatcc 154417

>gb|AC146234.3| Pan troglodytes BAC clone CH251-199F20 from Y, complete sequence
          Length = 155191

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ccaaacgtccacgtgtatcc 71
              ||||||||||||||||||||
Sbjct: 101483 ccaaacgtccacgtgtatcc 101464

>gb|AC092327.4| Homo sapiens chromosome 16 clone RP11-158I3, complete sequence
          Length = 189756

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    taaggtttatttcagacttcattc 40
             ||||||||||||||| ||||||||
Sbjct: 48808 taaggtttatttcagtcttcattc 48785

>gb|AC007269.3| Homo sapiens PAC clone RP5-1058P19 from 7, complete sequence
          Length = 93011

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    gtgtatcctggtgccagcaggcac 87
             |||| |||||||||||||||||||
Sbjct: 85788 gtgtgtcctggtgccagcaggcac 85765

>dbj|BS000611.1| Pan troglodytes chromosome Y clone:PTB-386A09, complete sequences
          Length = 171989

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ccaaacgtccacgtgtatcc 71
             ||||||||||||||||||||
Sbjct: 34309 ccaaacgtccacgtgtatcc 34290

>dbj|BS000534.1| Pan troglodytes chromosome Y clone:PTB-092H12, complete sequences
          Length = 224014

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ccaaacgtccacgtgtatcc 71
              ||||||||||||||||||||
Sbjct: 162796 ccaaacgtccacgtgtatcc 162777

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 52       ccaaacgtccacgtgtatcc 71
                ||||||||||||||||||||
Sbjct: 22806054 ccaaacgtccacgtgtatcc 22806073

>gb|AC012476.8|AC012476 Homo sapiens chromosome 15 clone RP11-532F12 map 15q15, complete
             sequence
          Length = 178248

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   agtccccggtgggtgcagcc 158
             ||||||||||||||||||||
Sbjct: 77664 agtccccggtgggtgcagcc 77645

>gb|AC040170.9| Homo sapiens chromosome 16 clone RP11-514D23, complete sequence
          Length = 173012

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    taaggtttatttcagacttcattc 40
             ||||||||||||||| ||||||||
Sbjct: 30374 taaggtttatttcagtcttcattc 30397

>gb|AC007685.2|AC007685 Homo sapiens BAC clone RP11-558O12 from Y, complete sequence
          Length = 178377

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ccaaacgtccacgtgtatcc 71
             ||||||||||||||||||||
Sbjct: 55526 ccaaacgtccacgtgtatcc 55507

>gb|DQ187720.1| Homo sapiens donor 8 serotype PPS4 clone 24 immunoglobulin light
           chain variable region mRNA, partial cds
          Length = 331

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 65  tgtatcctggtgccagcagg 84
           ||||||||||||||||||||
Sbjct: 99  tgtatcctggtgccagcagg 118

>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence
          Length = 225432

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    gtgtatcctggtgccagcaggcac 87
             |||| |||||||||||||||||||
Sbjct: 17853 gtgtgtcctggtgccagcaggcac 17830

>gb|U78190.1|HSU78190 Human GTP cyclohydrolase I feedback regulatory protein gene,
           complete cds
          Length = 4000

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 139 agtccccggtgggtgcagcc 158
           ||||||||||||||||||||
Sbjct: 585 agtccccggtgggtgcagcc 566


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,200,930
Number of Sequences: 3902068
Number of extensions: 1200930
Number of successful extensions: 112215
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112154
Number of HSP's gapped (non-prelim): 61
length of query: 209
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 187
effective length of database: 17,147,199,772
effective search space: 3206526357364
effective search space used: 3206526357364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)