Clone Name | rbasd21a03 |
---|---|
Clone Library Name | barley_pub |
>SF21_HELAN (O23969) Pollen-specific protein SF21| Length = 352 Score = 59.7 bits (143), Expect = 5e-09 Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 2/65 (3%) Frame = -3 Query: 536 KAVHMTAKLDKRYSALVEVQACGSVVTEEQPHAMLIPMEYFPYGIRLVQAEPCKL--QPS 363 +A+ + KL SALVEV ACGS+VT+EQPHAMLIP+E F G L + PC+ P Sbjct: 257 EALQIAEKLGTNCSALVEVHACGSMVTQEQPHAMLIPLENFLKGFGLYR--PCRYSNSPR 314 Query: 362 QPFEP 348 P P Sbjct: 315 SPLGP 319 Score = 43.9 bits (102), Expect = 3e-04 Identities = 24/53 (45%), Positives = 29/53 (54%) Frame = -1 Query: 412 LMGYGLFXXXXXXXXXXXPLNPFCISPELLSPESMGVKLKPIKTRASLRA*VH 254 L G+GL+ PL P I PELL PE MG+KL+PIK R S + H Sbjct: 298 LKGFGLYRPCRYSNSPRSPLGPSSIDPELLYPEKMGLKLRPIKLRVSPQPRAH 350
>LRC56_MOUSE (Q8K375) Leucine-rich repeat-containing protein 56| Length = 552 Score = 30.8 bits (68), Expect = 2.6 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Frame = +3 Query: 348 GFKGLRGLELTWLGLNKPYPIREVL--HWYQHRMRLLLRHDRPTRLHL-----DESTVSL 506 G +R EL+W GLN P+P + L H HR R + P RL D V + Sbjct: 14 GTASIRVRELSWQGLNNPHPQNKRLGSHGDIHRERWVEERLSPARLQALAQVDDLQLVRV 73 Query: 507 IKLC 518 +++C Sbjct: 74 LEMC 77
>LRC56_RAT (Q4V8C9) Leucine-rich repeat-containing protein 56| Length = 548 Score = 30.4 bits (67), Expect = 3.3 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 7/64 (10%) Frame = +3 Query: 348 GFKGLRGLELTWLGLNKPYPIREVL--HWYQHRMRLLLRHDRPTRLHL-----DESTVSL 506 G +R EL+W GLN P P + L H +R R + H P RL D V + Sbjct: 14 GTASIRVRELSWQGLNNPQPQNKRLGSHGDIYRERRVEEHLSPARLQALAQVDDLQLVRV 73 Query: 507 IKLC 518 +++C Sbjct: 74 LEMC 77
>IF2_RHOS4 (Q3IYN5) Translation initiation factor IF-2| Length = 836 Score = 30.0 bits (66), Expect = 4.4 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +2 Query: 317 RREELRRYTEWVQRAARAGAYMAR----PEQAVSHKGSTPLVSASHAAAPPSRQTHTPAP 484 R E LR+ E +RA R AR ++A + P + S A+APPS + P Sbjct: 126 RAEALRQKAEDEERARREAEEAARRAEEAKRAPAPAAPQPAPAESRASAPPSAKPGLPPS 185 Query: 485 RRE 493 R+E Sbjct: 186 RKE 188
>RLPA_PSEAE (Q9X6V6) RlpA-like lipoprotein precursor| Length = 342 Score = 29.6 bits (65), Expect = 5.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +2 Query: 347 WVQRAARAGAYMARPEQAVSHKGSTPLVSASHAAAPPSRQTHTPAP 484 W QR A +A+P+QAV+ + + A A P +T+TP P Sbjct: 198 WAQRGRPAPMVLAQPKQAVAQAAPAAAQTQAVAMAQPI-ETYTPPP 242
>PKNA_MYCLE (P54743) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 437 Score = 29.6 bits (65), Expect = 5.7 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%) Frame = +2 Query: 359 AARAGAYMARPEQAVSHKGSTP--LVSASHAAAPPSRQTHTPAPRR 490 A RAG RP Q S ++P + S++ A A + T TPAPRR Sbjct: 273 AVRAGHRPPRPNQTPSSGRASPTTIPSSTQARAAVACGTKTPAPRR 318
>TATB_SHIFL (P69427) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/76 (22%), Positives = 32/76 (42%) Frame = +2 Query: 257 HLRSETGPRLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAVSHKGSTPLVSA 436 +L E +D L+ A +++R + E A + +H+G TP + Sbjct: 73 NLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGVTPAAAQ 132 Query: 437 SHAAAPPSRQTHTPAP 484 + A++P + TP P Sbjct: 133 TQASSPEQKPETTPEP 148
>TATB_ECOLI (P69425) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/76 (22%), Positives = 32/76 (42%) Frame = +2 Query: 257 HLRSETGPRLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAVSHKGSTPLVSA 436 +L E +D L+ A +++R + E A + +H+G TP + Sbjct: 73 NLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGVTPAAAQ 132 Query: 437 SHAAAPPSRQTHTPAP 484 + A++P + TP P Sbjct: 133 TQASSPEQKPETTPEP 148
>TATB_ECOL6 (Q8FBI7) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/76 (22%), Positives = 32/76 (42%) Frame = +2 Query: 257 HLRSETGPRLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAVSHKGSTPLVSA 436 +L E +D L+ A +++R + E A + +H+G TP + Sbjct: 73 NLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNETAHEGVTPAAAQ 132 Query: 437 SHAAAPPSRQTHTPAP 484 + A++P + TP P Sbjct: 133 TQASSPEQKPETTPEP 148
>TATB_ECO57 (P69426) Sec-independent protein translocase protein tatB| Length = 171 Score = 29.3 bits (64), Expect = 7.5 Identities = 17/76 (22%), Positives = 32/76 (42%) Frame = +2 Query: 257 HLRSETGPRLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAVSHKGSTPLVSA 436 +L E +D L+ A +++R + E A + +H+G TP + Sbjct: 73 NLTPELKASMDELRQAAESMKRSYVANDPEKASDEAHTIHNPVVKDNEAAHEGVTPAAAQ 132 Query: 437 SHAAAPPSRQTHTPAP 484 + A++P + TP P Sbjct: 133 TQASSPEQKPETTPEP 148
>C11B1_PIG (Q29552) Cytochrome P450 11B1, mitochondrial precursor (EC| 1.14.15.4) (CYPXIB1) (P450C11) (Steroid 11-beta-hydroxylase) Length = 503 Score = 29.3 bits (64), Expect = 7.5 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%) Frame = +2 Query: 251 YMHLRSE-------TGP--RLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAV 403 Y HLR GP RLDRLQL+ L + ++++T V AR + R Sbjct: 119 YRHLRGHKCGVFLLNGPTWRLDRLQLNPGVLSLQAMQKFTPLVDGVARDFSQALRARVMQ 178 Query: 404 SHKGSTPL 427 + +GS L Sbjct: 179 NARGSLTL 186
>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)| (IAB-7) (PH189) Length = 493 Score = 29.3 bits (64), Expect = 7.5 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 5/110 (4%) Frame = +2 Query: 224 HLQPFLLFPYMHLRSETGPRLDRLQLHAHALRREELRRYTEWVQRAARAGAYMARPEQAV 403 HLQ + HL H H ++++ +++ V ++ + + +Q+ Sbjct: 27 HLQQLHHHAHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHA--VVASSPSSVLQQQQQQST 84 Query: 404 SHKGSTPLVSASHAAAPPS-----RQTHTPAPRREHCISYQALRSCEQLS 538 STP + + PP +Q H PAP+++ + Q + +QL+ Sbjct: 85 PTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLA 134
>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial| marker 8) Length = 564 Score = 29.3 bits (64), Expect = 7.5 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 422 PLVSASHAAAPPSRQTHTPAPRREHC 499 PL +A H ++PP +TP P HC Sbjct: 496 PLNNAYHTSSPPPAPIYTPPPPAPHC 521
>SAS4_CAEBR (Q60JJ0) Spindle assembly abnormal protein 4| Length = 761 Score = 28.9 bits (63), Expect = 9.7 Identities = 16/35 (45%), Positives = 20/35 (57%) Frame = -3 Query: 290 DQDAGQSQSVGAYMEKEEKVGGVRSFRLTRRSAIL 186 D+D G + AY+ K E G FR+TRRSA L Sbjct: 8 DEDQGSQKPKRAYLRKGE---GTARFRMTRRSAPL 39
>C11B1_SHEEP (P51663) Cytochrome P450 11B1, mitochondrial precursor (EC| 1.14.15.4) (CYPXIB1) (P450C11) (Steroid 11-beta-hydroxylase) Length = 503 Score = 28.9 bits (63), Expect = 9.7 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 12/82 (14%) Frame = +2 Query: 218 SSHLQPFLLFPYMHLRSETGP------------RLDRLQLHAHALRREELRRYTEWVQRA 361 S H Q LL P++ R G RLDRL+L+ L L++YT V Sbjct: 105 SLHPQRMLLEPWLAYRQARGHKCGVFLLNGPQWRLDRLRLNPDVLSLPALQKYTPLVDGV 164 Query: 362 ARAGAYMARPEQAVSHKGSTPL 427 AR + + + +GS L Sbjct: 165 ARDFSQTLKARVLQNARGSLTL 186
>MYBPH_CHICK (Q05623) Myosin-binding protein H (MyBP-H) (H-protein) (86 kDa| protein) Length = 537 Score = 28.9 bits (63), Expect = 9.7 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Frame = +2 Query: 356 RAARAGAYMARPEQAVSHK-------GSTPLVSASHAAAPPSRQTHTPAPRREH 496 + A A A PE A K G P HA PP ++ H P P+ EH Sbjct: 17 KKAPAPASKKAPEPAPKEKPAPTPKEGHAPTPKEEHA--PPPKEEHAPPPKEEH 68 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,222,157 Number of Sequences: 219361 Number of extensions: 1471394 Number of successful extensions: 4520 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 4346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4513 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)