>ref|XM_479573.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 988

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 104 gctcagnagtagggctggatcttccagngctggttg 139
           |||||| |||||||||||||||||||| ||||||||
Sbjct: 716 gctcagtagtagggctggatcttccagcgctggttg 681

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 104      gctcagnagtagggctggatcttccagngctggttg 139
                |||||| |||||||||||||||||||| ||||||||
Sbjct: 28956093 gctcagtagtagggctggatcttccagcgctggttg 28956058

>dbj|AP005167.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0060O17
          Length = 180015

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 104   gctcagnagtagggctggatcttccagngctggttg 139
             |||||| |||||||||||||||||||| ||||||||
Sbjct: 73630 gctcagtagtagggctggatcttccagcgctggttg 73595

>emb|Y08988.1|OSR40G3 O.sativa osr40g3 gene
          Length = 1531

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 104  gctcagnagtagggctggatcttccagngctggttg 139
            |||||| |||||||||||||||||||| ||||||||
Sbjct: 1333 gctcagtagtagggctggatcttccagcgctggttg 1298

>dbj|AK072989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145K15, full
           insert sequence
          Length = 987

 Score = 60.0 bits (30), Expect = 2e-06
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 104 gctcagnagtagggctggatcttccagngctggttg 139
           |||||| |||||||||||||||||||| ||||||||
Sbjct: 715 gctcagtagtagggctggatcttccagcgctggttg 680

>gb|BT018086.1| Zea mays clone EL01N0552C09.c mRNA sequence
          Length = 666

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 106 tcagnagtagggctggatcttccagngctggttg 139
           |||| |||||||||||||||||||| ||||||||
Sbjct: 439 tcagtagtagggctggatcttccagcgctggttg 406

>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds
          Length = 846

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 49  cgcgtacgtgcgcgagccatgcatg 73
           ||||||||||| |||||||||||||
Sbjct: 655 cgcgtacgtgcacgagccatgcatg 631

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gagccatgcatgcatcgatc 81
              ||||||||||||||||||||
Sbjct: 298615 gagccatgcatgcatcgatc 298596

>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    gagccatgcatgcatcgatc 81
             ||||||||||||||||||||
Sbjct: 50453 gagccatgcatgcatcgatc 50434

>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0436E04
          Length = 144644

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gagccatgcatgcatcgatc 81
              ||||||||||||||||||||
Sbjct: 140285 gagccatgcatgcatcgatc 140266

>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02,
             complete sequence
          Length = 125650

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 67    atgcatgcatcgatccatgcacg 89
             ||||||||||| |||||||||||
Sbjct: 63783 atgcatgcatccatccatgcacg 63805

>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence
          Length = 152414

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 49182 ccatgcatgcatccatccatgca 49204

>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence
          Length = 191100

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 89895 ccatgcatgcatctatccatgca 89917

>gb|AC120869.12| Mus musculus chromosome 9, clone RP23-128A11, complete sequence
          Length = 244776

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 137256 ccatgcatgcatccatccatgca 137234

>gb|AC004928.2| Homo sapiens PAC clone RP5-914M6 from 7, complete sequence
          Length = 137137

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 93187 ccatgcatgcatccatccatgca 93209

>gb|AC125477.13| Medicago truncatula clone mth2-12j8, complete sequence
          Length = 127843

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    agccatgcatgcatcgatc 81
             |||||||||||||||||||
Sbjct: 86767 agccatgcatgcatcgatc 86749

>gb|AC125475.11| Medicago truncatula clone mth2-5j2, complete sequence
          Length = 165679

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 63   agccatgcatgcatcgatc 81
            |||||||||||||||||||
Sbjct: 1185 agccatgcatgcatcgatc 1203

>gb|AC112342.14| Rattus norvegicus 14 BAC CH230-253H12 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 150292

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 23129 ccatgcatgcatccatccatgca 23107



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 23057 ccatgcatgcatccatccatgca 23035

>emb|CR352207.9| Zebrafish DNA sequence from clone CH211-110B5 in linkage group 7,
             complete sequence
          Length = 180005

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             |||| ||||||||||||||||||
Sbjct: 53846 ccatccatgcatcgatccatgca 53824

>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete
              Sequence, complete sequence
          Length = 192227

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 120368 ccatgcatgcatccatccatgca 120390



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 120344 ccatgcatgcatccatccatgca 120366



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 120320 ccatgcatgcatccatccatgca 120342



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 120296 ccatgcatgcatccatccatgca 120318

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 63       agccatgcatgcatcgatc 81
                |||||||||||||||||||
Sbjct: 15470162 agccatgcatgcatcgatc 15470180

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 67       atgcatgcatcgatccatgcacg 89
                ||||||||||| |||||||||||
Sbjct: 20641743 atgcatgcatccatccatgcacg 20641765

>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 209920

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 76322 ccatgcatgcatccatccatgca 76300

>gb|AC154299.1| Mus musculus BAC clone RP23-402I16 from chromosome 13, complete
             sequence
          Length = 196855

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 21276 ccatgcatgcatccatccatgca 21298

>gb|AC105105.10| Homo sapiens chromosome 18, clone RP11-1151B14, complete sequence
          Length = 147826

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 130330 ccatgcatgcatccatccatgca 130352

>gb|AC175464.1| Mus musculus BAC clone RP23-129E4 from chromosome 16, complete sequence
          Length = 224605

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 165944 ccatgcatgcatccatccatgca 165966

>dbj|AP005568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1299_A11
          Length = 160099

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     agccatgcatgcatcgatc 81
              |||||||||||||||||||
Sbjct: 119454 agccatgcatgcatcgatc 119472

>emb|AL627327.29| Mouse DNA sequence from clone RP23-62O17 on chromosome 4, complete
             sequence
          Length = 249562

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 65    ccatgcatgcatcgatccatgca 87
             ||||||||||||| |||||||||
Sbjct: 39269 ccatgcatgcatccatccatgca 39291

>emb|AL606974.9| Mouse DNA sequence from clone RP23-39E21 on chromosome 4, complete
              sequence
          Length = 232587

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 65     ccatgcatgcatcgatccatgca 87
              ||||||||||||| |||||||||
Sbjct: 107866 ccatgcatgcatccatccatgca 107844


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 547,122
Number of Sequences: 3902068
Number of extensions: 547122
Number of successful extensions: 32945
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32738
Number of HSP's gapped (non-prelim): 207
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)