ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20k12 |
|---|---|
| Clone Library Name | barley_pub |
>IMA2_ORYSA (Q9FYP9) Importin alpha-2 subunit| Length = 528 Score = 163 bits (412), Expect = 3e-40 Identities = 78/96 (81%), Positives = 88/96 (91%) Frame = -2 Query: 520 EPPNIITEHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMRGYPNGQGPQLVERG 341 E P II EHLV+I++GGALPGFI+LVRSAD+++A LGLQFLELVMRGYPN QGP+LVE Sbjct: 432 ELPKIIVEHLVAIVDGGALPGFIHLVRSADVDTAGLGLQFLELVMRGYPNKQGPKLVEME 491 Query: 340 DGIEAMERFQFHENEAMRNMANGLVDKYFGEDYGLE 233 DGIEAMERFQFHENE MRNMANGLVD+YFGEDYGL+ Sbjct: 492 DGIEAMERFQFHENEQMRNMANGLVDEYFGEDYGLD 527
>IMA3_MOUSE (O35344) Importin alpha-3 subunit (Karyopherin alpha-3 subunit)| (Importin alpha Q2) Length = 521 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -2 Query: 484 IINGGALPGFINLVRSADIESARLGLQFLE--LVMRGYPNGQGPQLVERGDGIEAMERFQ 311 ++ +P F NL+ D + ++ L L+ L+M G +++E G+E +E Q Sbjct: 407 LVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEVLQ 466 Query: 310 FHENEAMRNMANGLVDKYFGED 245 HENE + +A ++D+YF D Sbjct: 467 QHENEDIYKLAFEIIDQYFSGD 488
>IMA3_HUMAN (O00505) Importin alpha-3 subunit (Karyopherin alpha-3 subunit)| (SRP1-gamma) Length = 521 Score = 42.7 bits (99), Expect = 6e-04 Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 2/82 (2%) Frame = -2 Query: 484 IINGGALPGFINLVRSADIESARLGLQFLE--LVMRGYPNGQGPQLVERGDGIEAMERFQ 311 ++ +P F NL+ D + ++ L L+ L+M G +++E G+E +E Q Sbjct: 407 LVQQNVIPPFCNLLSVKDSQVVQVVLDGLKNILIMAGDEASTIAEIIEECGGLEKIEVLQ 466 Query: 310 FHENEAMRNMANGLVDKYFGED 245 HENE + +A ++D+YF D Sbjct: 467 QHENEDIYKLAFEIIDQYFSGD 488
>IMA4_MOUSE (O35343) Importin alpha-4 subunit (Karyopherin alpha-4 subunit)| (Importin alpha Q1) Length = 521 Score = 40.0 bits (92), Expect = 0.004 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMRGYPNGQGP--QLVERGDGIEA 326 + + +I +P F NL+ D + ++ L L +++ + L+E G+E Sbjct: 402 DQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDQAETIANLIEECGGLEK 461 Query: 325 MERFQFHENEAMRNMANGLVDKYFGED 245 +E+ Q HENE + +A ++D++F D Sbjct: 462 IEQLQNHENEDIYKLAYEIIDQFFSSD 488
>IMA4_HUMAN (O00629) Importin alpha-4 subunit (Karyopherin alpha-4 subunit)| (Qip1 protein) Length = 521 Score = 40.0 bits (92), Expect = 0.004 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMRGYPNGQGP--QLVERGDGIEA 326 + + +I +P F NL+ D + ++ L L +++ + L+E G+E Sbjct: 402 DQVAYLIQQNVIPPFCNLLTVKDAQVVQVVLDGLSNILKMAEDEAETIGNLIEECGGLEK 461 Query: 325 MERFQFHENEAMRNMANGLVDKYFGED 245 +E+ Q HENE + +A ++D++F D Sbjct: 462 IEQLQNHENEDIYKLAYEIIDQFFSSD 488
>GA2L1_HUMAN (Q99501) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| (GAS2-related protein on chromosome 22) (GAR22 protein) Length = 681 Score = 37.4 bits (85), Expect = 0.026 Identities = 21/47 (44%), Positives = 24/47 (51%) Frame = +1 Query: 274 HWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPSSPVPGTEDR 414 H PC S +H P PR SPQ V P P+SPVPG+E R Sbjct: 271 HDPCRCSSTAH---RPPQPRVCTFSPQRVSPTTSPRPASPVPGSERR 314
>IMA1_RAT (P83953) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)| (Importin alpha 5) Length = 538 Score = 36.6 bits (83), Expect = 0.044 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMR-----GYPNGQGPQ----LVE 347 E + ++ G + +L+ D + ++ L LE ++R NG G L+E Sbjct: 414 EQIKYLVELGCIKPLCDLLTVMDAKIVQVALNGLENILRLGEQEAKRNGSGINPYCALIE 473 Query: 346 RGDGIEAMERFQFHENEAMRNMANGLVDKYFGED 245 G++ +E Q HEN+ + A L++ YFG + Sbjct: 474 EAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTE 507
>IMA1_MOUSE (Q60960) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)| (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (Importin alpha S1) Length = 538 Score = 36.6 bits (83), Expect = 0.044 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMR-----GYPNGQGPQ----LVE 347 E + ++ G + +L+ D + ++ L LE ++R NG G L+E Sbjct: 414 EQIKYLVELGCIKPLCDLLTVMDAKIVQVALNGLENILRLGEQEAKRNGSGINPYCALIE 473 Query: 346 RGDGIEAMERFQFHENEAMRNMANGLVDKYFGED 245 G++ +E Q HEN+ + A L++ YFG + Sbjct: 474 EAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTE 507
>IMA7_HUMAN (O60684) Importin alpha-7 subunit (Karyopherin alpha-6)| Length = 536 Score = 36.6 bits (83), Expect = 0.044 Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 9/92 (9%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMR-----GYPNGQGPQ----LVE 347 E + +++ G + +L+ D + ++ L LE ++R G +G G L+E Sbjct: 412 EQIRYLVSLGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEGKRSGSGVNPYCGLIE 471 Query: 346 RGDGIEAMERFQFHENEAMRNMANGLVDKYFG 251 G++ +E Q HEN+ + A L++ YFG Sbjct: 472 EAYGLDKIEFLQSHENQEIYQKAFDLIEHYFG 503
>IMA2_MOUSE (P52293) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| (SRP1-alpha) (RAG cohort protein 1) (Pendulin) (Pore targeting complex 58 kDa subunit) (PTAC58) (Importin alpha P1) Length = 529 Score = 36.2 bits (82), Expect = 0.057 Identities = 21/86 (24%), Positives = 46/86 (53%), Gaps = 4/86 (4%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMRGYPN-GQGPQL---VERGDGI 332 E +V +++ G + +NL+ + D + ++ L + + + G+ +L +E G+ Sbjct: 411 EQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGL 470 Query: 331 EAMERFQFHENEAMRNMANGLVDKYF 254 + +E Q HENE++ + L++KYF Sbjct: 471 DKIEALQRHENESVYKASLNLIEKYF 496
>IMA1_HUMAN (P52294) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)| (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1) Length = 538 Score = 35.8 bits (81), Expect = 0.074 Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 9/94 (9%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMR-----GYPNGQGPQ----LVE 347 E + ++ G + +L+ D + ++ L LE ++R NG G L+E Sbjct: 414 EQIKYLVELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIE 473 Query: 346 RGDGIEAMERFQFHENEAMRNMANGLVDKYFGED 245 G++ +E Q HEN+ + A L++ YFG + Sbjct: 474 EAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTE 507
>IMA7_MOUSE (O35345) Importin alpha-7 subunit (Karyopherin alpha-6 subunit)| (Importin alpha S2) Length = 533 Score = 35.8 bits (81), Expect = 0.074 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -2 Query: 469 ALPGFINLVRSADIESARLGLQFLELVMRGYPNGQGPQ--LVERGDGIEAMERFQFHENE 296 AL G N++R + ES R G +G P L+E G++ +E Q HEN+ Sbjct: 438 ALNGLENILRLGEQESKRSG------------SGVNPYCGLIEEAYGLDKIEFLQSHENQ 485 Query: 295 AMRNMANGLVDKYFG 251 + A L++ YFG Sbjct: 486 EIYQKAFDLIEHYFG 500
>IMA1_XENLA (P52170) Importin alpha-1 subunit (Karyopherin alpha-1 subunit)| Length = 521 Score = 35.0 bits (79), Expect = 0.13 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLE-LVMRGYPNGQGPQL---VERGDGI 332 E +V ++ G L +NL+ D ++ + L + + + G+ +L VE G+ Sbjct: 403 EQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEKLCLLVEELGGL 462 Query: 331 EAMERFQFHENEAMRNMANGLVDKYF-GED 245 E +E Q H+N + + A L++KYF GE+ Sbjct: 463 EKIEALQTHDNHMVYHAALALIEKYFSGEE 492
>IMA2_HUMAN (P52292) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| (SRP1-alpha) (RAG cohort protein 1) Length = 529 Score = 35.0 bits (79), Expect = 0.13 Identities = 21/86 (24%), Positives = 45/86 (52%), Gaps = 4/86 (4%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLELVMRGYPN-GQGPQL---VERGDGI 332 E +V +++ G + +NL+ + D + + L + + + G+ +L +E G+ Sbjct: 411 EQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGL 470 Query: 331 EAMERFQFHENEAMRNMANGLVDKYF 254 + +E Q HENE++ + L++KYF Sbjct: 471 DKIEALQNHENESVYKASLSLIEKYF 496
>IMA2_XENLA (P52171) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| Length = 522 Score = 35.0 bits (79), Expect = 0.13 Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Frame = -2 Query: 499 EHLVSIINGGALPGFINLVRSADIESARLGLQFLE-LVMRGYPNGQGPQL---VERGDGI 332 E +V ++ G L +NL+ D ++ + L + + + G+ +L VE G+ Sbjct: 403 EQVVQLVQCGVLEPLLNLLTIKDSKTILVILDAISNIFLAAEKLGEQEKLCLLVEELGGL 462 Query: 331 EAMERFQFHENEAMRNMANGLVDKYF-GED 245 E +E Q H+N + + A L++KYF GE+ Sbjct: 463 EKIEALQTHDNRMVYHAALALIEKYFSGEE 492
>IMA5_HUMAN (O15131) Importin alpha-6 subunit (Karyopherin alpha-5 subunit)| Length = 536 Score = 33.9 bits (76), Expect = 0.28 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = -2 Query: 469 ALPGFINLVRSADIESARLGLQFLELVMRGYPNGQGPQ--LVERGDGIEAMERFQFHENE 296 AL G N++R + ES + G+ G P L+E G++ +E Q HEN+ Sbjct: 441 ALNGLENILRLGEQESKQNGI------------GINPYCALIEEAYGLDKIEFLQSHENQ 488 Query: 295 AMRNMANGLVDKYFG 251 + A L++ YFG Sbjct: 489 EIYQKAFDLIEHYFG 503
>IMA1_YEAST (Q02821) Importin alpha subunit (Karyopherin alpha subunit)| (Serine-rich RNA polymerase I suppressor protein) Length = 542 Score = 33.5 bits (75), Expect = 0.37 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 9/89 (10%) Frame = -2 Query: 484 IINGGALPGFINLVRSADIESARLGLQFLELVM---------RGYPNGQGPQLVERGDGI 332 +++ G + +L+ AD + L LE ++ RG + +E+ G+ Sbjct: 424 LVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGM 483 Query: 331 EAMERFQFHENEAMRNMANGLVDKYFGED 245 E + Q +EN+ + A +++ YFGE+ Sbjct: 484 EKIFNCQQNENDKIYEKAYKIIETYFGEE 512
>NGN2_MOUSE (P70447) Neurogenin 2 (Atonal protein homolog 4) (Helix-loop-helix| protein mATH-4A) (MATH4A) Length = 263 Score = 33.5 bits (75), Expect = 0.37 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 268 PAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTP 384 P+ W C++SP S TSP+ P+ D +W P Sbjct: 207 PSSWSCTNSPASSSNSTSPYSCTLSPASPGSDVDYWQPP 245
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 32.7 bits (73), Expect = 0.63 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +1 Query: 226 PLTRGRNPHRS-ICRPAHWPCS--SSPRSHGTGTSPWPRCRPPSP 351 P +RG NP S + P+H P S + P SHG G P RPPSP Sbjct: 100 PPSRGFNPPPSPVISPSHPPPSYGAPPPSHGPGHLPSHGQRPPSP 144
>NOP14_ASHGO (Q75A47) Probable nucleolar complex protein 14| Length = 806 Score = 32.0 bits (71), Expect = 1.1 Identities = 14/26 (53%), Positives = 20/26 (76%), Gaps = 1/26 (3%) Frame = -2 Query: 322 ERFQFHENE-AMRNMANGLVDKYFGE 248 +R +FHE++ A +N A GL+DK FGE Sbjct: 89 QRLRFHESKKAQKNRAGGLIDKRFGE 114
>IMA_DROME (P52295) Importin alpha subunit (Karyopherin alpha subunit)| (Pendulin) Length = 522 Score = 32.0 bits (71), Expect = 1.1 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%) Frame = -2 Query: 355 LVERGDGIEAMERFQFHENEAMRNMANGLVDKYF--GED 245 +VE G++ +E Q HENE + A ++D YF G+D Sbjct: 453 MVEEMGGLDKLETLQQHENEEVYKKAYAIIDTYFSNGDD 491
>IMA1A_ORYSA (Q71VM4) Importin alpha-1a subunit| Length = 526 Score = 31.6 bits (70), Expect = 1.4 Identities = 13/51 (25%), Positives = 28/51 (54%) Frame = -2 Query: 358 QLVERGDGIEAMERFQFHENEAMRNMANGLVDKYFGEDYGLE*AVTTAASP 206 Q+++ +G+E +E Q H+N + A +++ Y+ ++ TT A+P Sbjct: 459 QMIDEAEGLEKIENLQSHDNNEIYEKAVKILEAYWMDEEDDTMGATTVAAP 509
>CWC22_NEUCR (Q7RX84) Pre-mRNA-splicing factor cwc-22| Length = 1010 Score = 31.6 bits (70), Expect = 1.4 Identities = 22/69 (31%), Positives = 30/69 (43%) Frame = +1 Query: 244 NPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPSSPVPGTEDRVLR 423 +PH + P+ S SPR SP R PSP + DP + +P P R R Sbjct: 12 HPHDATRSPSPRTQSPSPRDEDGSRSPGERT--PSPPSRDPSPYRSPGERTPSPSPRRDR 69 Query: 424 SLYQQT*PN 450 SL + P+ Sbjct: 70 SLSPRDQPH 78
>GA2L1_MOUSE (Q8JZP9) GAS2-like protein 1 (Growth arrest-specific 2-like 1)| Length = 678 Score = 31.6 bits (70), Expect = 1.4 Identities = 20/50 (40%), Positives = 22/50 (44%) Frame = +1 Query: 274 HWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPSSPVPGTEDRVLR 423 H PC S +H P R SPQ P P SPVPG+E R R Sbjct: 271 HDPCRCSSSTHRL---PQQRTGTFSPQRGSPTPSPRPGSPVPGSERRSSR 317
>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3259 Score = 31.2 bits (69), Expect = 1.8 Identities = 28/79 (35%), Positives = 33/79 (41%) Frame = +1 Query: 184 GSQTDARLARRR*SPLTRGRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVD 363 G + RR PLTR R CR P ++ P T +P R R P QAV Sbjct: 588 GEGPQQEIKRRDQFPLTRSRAIQE--CRSPVPPFTADPPESRT-KAPSARKREPPAQAVR 644 Query: 364 PVHWDTPSSPVPGTEDRVL 420 + W T PG ED VL Sbjct: 645 FLPWAT-----PGVEDSVL 658
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 30.8 bits (68), Expect = 2.4 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +1 Query: 199 ARLARRR*SPLTRGRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRP-PSPQAVDPVHW 375 A+L RRR + + P +S+ P P + + T +P P +P PSP ++ P + Sbjct: 1862 AQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGF 1921 Query: 376 DTPSSPVPGT 405 + + P T Sbjct: 1922 PSVARTQPPT 1931
>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase| (EC 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3262 Score = 30.8 bits (68), Expect = 2.4 Identities = 28/79 (35%), Positives = 33/79 (41%) Frame = +1 Query: 184 GSQTDARLARRR*SPLTRGRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVD 363 G + RR PLTR R CR P ++ P T +P R R P QAV Sbjct: 588 GEGPQQEIKRRDQFPLTRSRAIQE--CRSPVPPYTADPPESRT-KAPSGRKREPPAQAVR 644 Query: 364 PVHWDTPSSPVPGTEDRVL 420 + W T PG ED VL Sbjct: 645 FLPWAT-----PGVEDSVL 658
>NFX1_HUMAN (Q12986) Transcriptional repressor NF-X1 (EC 6.3.2.-) (Nuclear| transcription factor, X box-binding, 1) Length = 1104 Score = 30.8 bits (68), Expect = 2.4 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 Query: 280 PCSSSPRSHGTGTSPWPRCR 339 PC+ SP+SHG PW + R Sbjct: 75 PCNKSPKSHGLQNQPWQKLR 94
>HASP_MOUSE (Q9Z0R0) Serine/threonine-protein kinase Haspin (EC 2.7.11.1)| (Haploid germ cell-specific nuclear protein kinase) (Germ cell-specific gene 2 protein) Length = 754 Score = 30.8 bits (68), Expect = 2.4 Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +1 Query: 223 SPLTRGRNPHRSICRPA-----HWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPS 387 +P +R R P C P H C S S+ GTS P SP A DP++ D Sbjct: 110 TPCSRLRPPPFPNCSPGCLGSDHSVCIQSRDSNELGTSASLFSSPASPGAPDPLYAD--- 166 Query: 388 SPVPGTEDRVLRSLYQQT*P 447 S VPG+ SL + + P Sbjct: 167 SAVPGSFHLPAASLSEPSVP 186
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 30.4 bits (67), Expect = 3.1 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Frame = +1 Query: 163 VHEQLLLGSQTDARLARRR*SPLTRGRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRP 342 V +Q + A+L RRR + + P +S+ P P + + T +P P +P Sbjct: 1851 VRQQQIQHCLQQAQLMRRRMATMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQP 1910 Query: 343 -PSPQAVDPVHWDTPSSPVPGT 405 PSP + P + + P T Sbjct: 1911 QPSPVNMSPAGFPNVARTQPPT 1932
>MT_XENLA (Q05890) Metallothionein (MT)| Length = 62 Score = 30.0 bits (66), Expect = 4.1 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -1 Query: 191 CEPSSSCSCTQTVKCNFFVIVECIQDCLR*RSCC 90 CE +SCSC T C+ C + C SCC Sbjct: 8 CETGASCSCGTTCSCSNCKCTSCKKSCC---SCC 38
>KSR1_HUMAN (Q8IVT5) Kinase suppressor of ras-1 (Kinase suppressor of ras)| Length = 921 Score = 30.0 bits (66), Expect = 4.1 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 8/71 (11%) Frame = +1 Query: 223 SPLTRGRNPH-----RSICRPAHWPCSS---SPRSHGTGTSPWPRCRPPSPQAVDPVHWD 378 +P+ R PH +++ + H P + S + + TS P P P + +P Sbjct: 411 NPVDRAAEPHFGTLPKALTKKEHPPAMNHLDSSSNPSSTTSSTPSSPAPFPTSSNPSSAT 470 Query: 379 TPSSPVPGTED 411 TP +P PG D Sbjct: 471 TPPNPSPGQRD 481
>TNC6B_HUMAN (Q9UPQ9) Trinucleotide repeat-containing 6B protein| Length = 1723 Score = 29.6 bits (65), Expect = 5.3 Identities = 21/68 (30%), Positives = 25/68 (36%), Gaps = 11/68 (16%) Frame = +1 Query: 232 TRGRNPHRSICRPAHWP-CSSSPRSHGTGTSP--W--------PRCRPPSPQAVDPVHWD 378 T G + S+ W C SP + TG P W P +PP PQ W Sbjct: 782 TWGNGGNASLASKGGWEDCKRSPAWNETGRQPNSWNKQHQQQQPPQQPPPPQPEASGSWG 841 Query: 379 TPSSPVPG 402 P P PG Sbjct: 842 GPPPPPPG 849
>NKG2D_MACMU (Q9MZJ7) NKG2-D type II integral membrane protein| (NKG2-D-activating NK receptor) (NK cell receptor D) (Killer cell lectin-like receptor subfamily K member 1) (CD314 antigen) Length = 216 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Frame = +3 Query: 129 HDYKKVAFYSLSTRAAAAGFTNRCKIGEAAVVTAHSRP*SSPK----YLSTSPLAMFLIA 296 H+ + F++ A + F+ RC+ V+ + R +SP +++ + F+I Sbjct: 11 HNLEMSEFHNYKLGLAKSDFSTRCQKQRCPVIKSKCRENASPLFFCCFIAVAMGIRFIIM 70 Query: 297 SFSWNW----NLSMASMPSPLSTS-CGPCP 371 W+ +L + PL+ S CGPCP Sbjct: 71 VTIWSAVFLNSLFNQEVQIPLTESYCGPCP 100
>NKG2D_MACFA (P61252) NKG2-D type II integral membrane protein| (NKG2-D-activating NK receptor) (NK cell receptor D) (Killer cell lectin-like receptor subfamily K member 1) (CD314 antigen) Length = 216 Score = 29.6 bits (65), Expect = 5.3 Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Frame = +3 Query: 129 HDYKKVAFYSLSTRAAAAGFTNRCKIGEAAVVTAHSRP*SSPK----YLSTSPLAMFLIA 296 H+ + F++ A + F+ RC+ V+ + R +SP +++ + F+I Sbjct: 11 HNLEMSEFHNYKLGLAKSDFSTRCQKQRCPVIKSKCRENASPLFFCCFIAVAMGIRFIIM 70 Query: 297 SFSWNW----NLSMASMPSPLSTS-CGPCP 371 W+ +L + PL+ S CGPCP Sbjct: 71 VTIWSAVFLNSLFNQEVQIPLTESYCGPCP 100
>NADD_BACHD (Q9KD91) Probable nicotinate-nucleotide adenylyltransferase (EC| 2.7.7.18) (Deamido-NAD(+) pyrophosphorylase) (Deamido-NAD(+) diphosphorylase) (Nicotinate mononucleotide adenylyltransferase) (NaMN adenylyltransferase) Length = 207 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +2 Query: 281 HVPHRLVLMELEPLHGLDAVPPLHKLWTLSIGIPPHHQFQEL 406 H+ H +L+ E +H D L ++W + +GIPPH + +E+ Sbjct: 15 HIGH--LLLAQEAIHCAD----LDEVWFVPVGIPPHKEREEI 50
>V70K_EPMV (P20129) 70 kDa protein| Length = 649 Score = 29.3 bits (64), Expect = 7.0 Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 10/52 (19%) Frame = +1 Query: 280 PCSSSPRSHGTG-----TSPWPR--CRPPSPQAVDPVHWDTPSS---PVPGT 405 P S SP SH + TSP PR C PP P A+D + TP + P P T Sbjct: 570 PPSPSPSSHSSSSFQSCTSP-PRFPCYPPPPSALDLLFSSTPGTDPFPPPDT 620
>TIG_BURPS (Q63V42) Trigger factor (TF)| Length = 449 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = +2 Query: 185 VHKQMQDWRGGGSHRSLEAVILTEVFVDQPIGHVPHRLVLMELEPLHGLDAVP 343 V QD G + +A I E+F DQ V LVL EL +GL+A P Sbjct: 327 VEMARQDLAQRGVPNAKDAPIPAEMFADQAERRVKLGLVLAELVKANGLEAKP 379
>TIG_BURMA (Q62JK6) Trigger factor (TF)| Length = 449 Score = 29.3 bits (64), Expect = 7.0 Identities = 20/53 (37%), Positives = 25/53 (47%) Frame = +2 Query: 185 VHKQMQDWRGGGSHRSLEAVILTEVFVDQPIGHVPHRLVLMELEPLHGLDAVP 343 V QD G + +A I E+F DQ V LVL EL +GL+A P Sbjct: 327 VEMARQDLAQRGVPNAKDAPIPAEMFADQAERRVKLGLVLAELVKANGLEAKP 379
>MT1X_HUMAN (P80297) Metallothionein-1X (MT-1X) (Metallothionein-IX) (MT-IX)| Length = 61 Score = 29.3 bits (64), Expect = 7.0 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = -1 Query: 191 CEPSSSCSCTQTVKCNFFVIVECIQDCLR*RSCC 90 C P SC+C + KC C + C SCC Sbjct: 7 CSPVGSCACAGSCKCKECKCTSCKKSCC---SCC 37
>IMA2_ARATH (O04294) Importin alpha-2 subunit (Karyopherin alpha-2 subunit)| (KAP alpha) Length = 531 Score = 29.3 bits (64), Expect = 7.0 Identities = 10/38 (26%), Positives = 24/38 (63%) Frame = -2 Query: 358 QLVERGDGIEAMERFQFHENEAMRNMANGLVDKYFGED 245 Q+++ +G+E +E Q H+N + + A +++ ++ ED Sbjct: 463 QMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTED 500
>NHR8_CAEEL (Q9XYB7) Nuclear hormone receptor family member nhr-8| Length = 560 Score = 29.3 bits (64), Expect = 7.0 Identities = 29/128 (22%), Positives = 49/128 (38%) Frame = +3 Query: 12 GSYPAHFKLPLQQPHRHTRPWRWPSYTATTLPQTVLYTFHDYKKVAFYSLSTRAAAAGFT 191 G YP +L +P TA PQ + ++ H + +FYS ST Sbjct: 169 GFYPITQRLTAYEPK---------DTTAVNSPQDISFSHHLHHSDSFYSSSTST------ 213 Query: 192 NRCKIGEAAVVTAHSRP*SSPKYLSTSPLAMFLIASFSWNWNLSMASMPSPLSTSCGPCP 371 + +V++ S Y ++ L+ N+ +S AS+PS ++ P Sbjct: 214 ----LSPMSVISCAPSSHDSSGYNTSQ-----LVTQSPTNYTVSPASIPSSITELSPQMP 264 Query: 372 LGYPLITS 395 YP + S Sbjct: 265 SQYPPMLS 272
>L_PI2HT (P26676) Large structural protein (Protein L) (Transcriptase)| (Replicase) [Includes: RNA-directed RNA polymerase (EC 2.7.7.48); mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56); mRNA guanylyltransferase (EC 2.7.7.-)] Length = 2262 Score = 29.3 bits (64), Expect = 7.0 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 11/42 (26%) Frame = +2 Query: 242 VILTEVFVDQPI-----------GHVPHRLVLMELEPLHGLD 334 ++L EV ++ PI GH PH L + E+ PLH D Sbjct: 7 ILLPEVHLNSPIVKHKLIYYLLLGHFPHDLDISEISPLHNND 48
>YN18_YEAST (P53836) Hypothetical 118.3 kDa protein in ERG24-MET2 intergenic| region Length = 1060 Score = 29.3 bits (64), Expect = 7.0 Identities = 17/57 (29%), Positives = 28/57 (49%) Frame = +1 Query: 187 SQTDARLARRR*SPLTRGRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQA 357 + +D+ +R+ PL +PH+ H P +S R+ T SP+ + R P P A Sbjct: 499 NNSDSPSIKRKSPPLVISESPHK-----VHTPTDASFRTRVTEGSPYAKQRHPKPFA 550
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 29.3 bits (64), Expect = 7.0 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = +1 Query: 238 GRNPHRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPSSPVP 399 G P + P P S++P T P P P P + P+ PS+P P Sbjct: 1680 GMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>MT1H_HUMAN (P80294) Metallothionein-1H (MT-1H) (Metallothionein-IH) (MT-IH)| (Metallothionein-0) (MT-0) Length = 61 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = -1 Query: 191 CEPSSSCSCTQTVKCNFFVIVECIQDCLR*RSCC 90 CE SC+C + KC C + C SCC Sbjct: 7 CEAGGSCACAGSCKCKKCKCTSCKKSCC---SCC 37
>MT1H_BOVIN (P55942) Metallothionein-I, hippocampal (MT-1)| Length = 61 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/34 (35%), Positives = 14/34 (41%) Frame = -1 Query: 191 CEPSSSCSCTQTVKCNFFVIVECIQDCLR*RSCC 90 C SC+C T KC C + C SCC Sbjct: 7 CATGDSCACASTCKCKECKCTSCKKSCC---SCC 37
>IMA1_SCHPO (O14063) Importin alpha subunit (Karyopherin alpha subunit)| (Serine-rich RNA polymerase I suppressor protein) (Cell untimely torn protein 15) Length = 542 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/93 (21%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Frame = -2 Query: 484 IINGGALPGFINLVRSADIESARLGLQFLELVMR--GYPNGQGPQ-------LVERGDGI 332 ++ GA+ NL+ D + ++ L +E ++R P VE G+ Sbjct: 415 LVEQGAIKPLCNLLACQDNKIIQVALDGIENILRVGELDRANNPDKINLYAVYVEDAGGM 474 Query: 331 EAMERFQFHENEAMRNMANGLVDKYFGEDYGLE 233 + + Q N + A +++K+FGE+ +E Sbjct: 475 DLIHECQNSSNSEIYQKAYNIIEKFFGEEDEIE 507
>VE2_PAPVD (P03123) Probable regulatory protein E2| Length = 416 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +1 Query: 226 PLTRGRNPHRSICRPAHWPCSSSPRSHGTG---TSPWPRCRPPSPQAV 360 P+ N RSI RP + SPRS G G TSP P P +P+ V Sbjct: 244 PVRACENRGRSINRPTPYSTPQSPRS-GVGPDTTSPLPSPVPQNPRCV 290
>KLKB1_MOUSE (P26262) Plasma kallikrein precursor (EC 3.4.21.34) (Plasma| prekallikrein) (Kininogenin) (Fletcher factor) [Contains: Plasma kallikrein heavy chain; Plasma kallikrein light chain] Length = 638 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 Query: 200 ASVCEPSSSCSCTQTVKCNFFVIVECIQDC 111 A VC+ + CT+T++C FF+ QDC Sbjct: 315 ADVCQET----CTKTIRCQFFIYSLLPQDC 340
>IMA_LYCES (O22478) Importin alpha subunit (Karyopherin alpha subunit) (KAP| alpha) Length = 527 Score = 28.9 bits (63), Expect = 9.1 Identities = 11/38 (28%), Positives = 23/38 (60%) Frame = -2 Query: 358 QLVERGDGIEAMERFQFHENEAMRNMANGLVDKYFGED 245 QL++ +G+E +E Q H+N + A +++ Y+ E+ Sbjct: 461 QLIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEE 498
>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)| Length = 620 Score = 28.9 bits (63), Expect = 9.1 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +1 Query: 271 AHWPCSSSPRSHGTGTSPWPRCRPPSPQAVD----PVHWDTPSSP 393 +HWP S PR G +P + RP SP + P D P SP Sbjct: 54 SHWP-QSPPRGQPDGGAPGEKARPASPALSEASSGPPTPDIPLSP 97
>CHIB_ARATH (P19171) Basic endochitinase B precursor (EC 3.2.1.14)| (Pathogenesis-related protein 3) (PR-3) (AtChiB) Length = 335 Score = 28.9 bits (63), Expect = 9.1 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Frame = +1 Query: 241 RNPHRSICRP-AHWPCSSSPRSHGTG 315 +NP C P A WPC+S R +G G Sbjct: 174 QNPASDYCEPSATWPCASGKRYYGRG 199
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 28.9 bits (63), Expect = 9.1 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 9/94 (9%) Frame = +2 Query: 125 IPR-LQKSCILQF------EYTSSCC--WVHKQMQDWRGGGSHRSLEAVILTEVFVDQPI 277 +PR L K +QF E T C W H + GG S R E V E V Sbjct: 2295 LPRALDKPVTVQFRLLETEERTKPICVFWNHSILVSGTGGWSARGCEVVFRNESHVSCQC 2354 Query: 278 GHVPHRLVLMELEPLHGLDAVPPLHKLWTLSIGI 379 H+ VLM++ + PL L +++G+ Sbjct: 2355 NHMTSFAVLMDMSRREN-GEILPLKTLTYVALGV 2387
>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein| Rigui) (hPER) Length = 1290 Score = 28.9 bits (63), Expect = 9.1 Identities = 16/61 (26%), Positives = 26/61 (42%) Frame = +1 Query: 250 HRSICRPAHWPCSSSPRSHGTGTSPWPRCRPPSPQAVDPVHWDTPSSPVPGTEDRVLRSL 429 HR + +P H P + G TSP P P S + + P P P T ++ + + Sbjct: 494 HRLLLQPVHSPSPTGLCGVGAVTSPGPLHSPGSSSDSNGGDAEGPGPPAPVTFQQICKDV 553 Query: 430 Y 432 + Sbjct: 554 H 554
>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)| Length = 472 Score = 28.9 bits (63), Expect = 9.1 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = +3 Query: 21 PAHFKLPLQQPHRHTRPWRWPSYTATTLPQTVLYTFHDYKKVAFYSLSTRAAAAGFTNRC 200 P HFK R PWRW S + TT P V F ++ R A + F +R Sbjct: 381 PNHFK-----DARTFNPWRWQSNSVTTGPSNVFTPFGGGPRLCPGYELARVALSVFLHRL 435 Query: 201 KIG 209 G Sbjct: 436 VTG 438 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,699,584 Number of Sequences: 219361 Number of extensions: 1942552 Number of successful extensions: 6687 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 6199 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6662 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4027872870 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
