>ref|XM_467336.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2373

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                        
Query: 623  aaagaatcggcattgctcccctgaaaacctatccagaagaattgccctttcctcttcact 682
            ||||| || |||||||| ||||||||||||||||| ||||||  ||| ||||||||||||
Sbjct: 2225 aaagattcagcattgctaccctgaaaacctatccaaaagaatctccccttcctcttcact 2166

                               
Query: 683  ttactaggtaaggactgtg 701
            ||||| | ||| |||||||
Sbjct: 2165 ttacttgttaacgactgtg 2147



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 507  tatcatcatcagaatcagtttcagtatcttgg 538
            ||||||| ||||||||||| || |||||||||
Sbjct: 2341 tatcatcgtcagaatcagtgtcggtatcttgg 2310

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 623      aaagaatcggcattgctcccctgaaaacctatccagaagaattgccctttcctcttcact 682
                ||||| || |||||||| ||||||||||||||||| ||||||  ||| ||||||||||||
Sbjct: 28939102 aaagattcagcattgctaccctgaaaacctatccaaaagaatctccccttcctcttcact 28939043

                                   
Query: 683      ttactaggtaaggactgtg 701
                ||||| | ||| |||||||
Sbjct: 28939042 ttacttgttaacgactgtg 28939024



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 507      tatcatcatcagaatcagtttcagtatcttgg 538
                ||||||| ||||||||||| || |||||||||
Sbjct: 28939218 tatcatcgtcagaatcagtgtcggtatcttgg 28939187

>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 623   aaagaatcggcattgctcccctgaaaacctatccagaagaattgccctttcctcttcact 682
             ||||| || |||||||| ||||||||||||||||| ||||||  ||| ||||||||||||
Sbjct: 22160 aaagattcagcattgctaccctgaaaacctatccaaaagaatctccccttcctcttcact 22101

                                
Query: 683   ttactaggtaaggactgtg 701
             ||||| | ||| |||||||
Sbjct: 22100 ttacttgttaacgactgtg 22082



 Score = 40.1 bits (20), Expect = 9.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 507   tatcatcatcagaatcagtttcagtatcttgg 538
             ||||||| ||||||||||| || |||||||||
Sbjct: 22276 tatcatcgtcagaatcagtgtcggtatcttgg 22245

>ref|XM_581886.2| PREDICTED: Bos taurus similar to F46F6.4 (LOC505579), mRNA
          Length = 1570

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 508 atcatcatcagaatcagtttcag 530
           |||||||||||||||||||||||
Sbjct: 429 atcatcatcagaatcagtttcag 407

>gb|BC116107.1| Bos taurus cDNA clone MGC:139434 IMAGE:8202769, complete cds
          Length = 1548

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 508 atcatcatcagaatcagtttcag 530
           |||||||||||||||||||||||
Sbjct: 378 atcatcatcagaatcagtttcag 356

>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 185497

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 218   atgttcagattgtaattgtgtt 239
             ||||||||||||||||||||||
Sbjct: 35820 atgttcagattgtaattgtgtt 35799

>gb|AC087821.5| Homo sapiens chromosome 8, clone RP11-108A14, complete sequence
          Length = 167949

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 40    tctatcatgcagatggctagtaggta 65
             ||||||| ||||||||||||||||||
Sbjct: 70066 tctatcaggcagatggctagtaggta 70091

>gb|AE003519.3| Drosophila melanogaster chromosome 3L, section 66 of 83 of the complete
              sequence
          Length = 294542

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 218    atgttcagattgtaattgtgtt 239
              ||||||||||||||||||||||
Sbjct: 286347 atgttcagattgtaattgtgtt 286326

>gb|AC127036.3| Mus musculus BAC clone RP23-39I4 from chromosome 3, complete sequence
          Length = 190168

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 667    ccctttcctcttcactttact 687
              |||||||||||||||||||||
Sbjct: 149649 ccctttcctcttcactttact 149629

>gb|AC125089.4| Mus musculus BAC clone RP24-157G15 from chromosome 3, complete sequence
          Length = 149815

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 667    ccctttcctcttcactttact 687
              |||||||||||||||||||||
Sbjct: 130635 ccctttcctcttcactttact 130655

>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 278     tcctgaatattgtcttcagtc 298
               |||||||||||||||||||||
Sbjct: 3158977 tcctgaatattgtcttcagtc 3158957

>gb|AC005313.3| Arabidopsis thaliana chromosome 2 clone T18E12 map CIC11A04, complete
             sequence
          Length = 91318

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 508   atcatcatcagaatcagtttc 528
             |||||||||||||||||||||
Sbjct: 86142 atcatcatcagaatcagtttc 86122

>gb|AC160823.2| Xenopus tropicalis BMP4 gene, complete cds, complete sequence
          Length = 67072

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   atgttcagattgtaattgtgt 238
             |||||||||||||||||||||
Sbjct: 31689 atgttcagattgtaattgtgt 31669

>dbj|AB005236.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIK22
          Length = 82035

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 508   atcatcatcagaatcagtttc 528
             |||||||||||||||||||||
Sbjct: 45483 atcatcatcagaatcagtttc 45463

>ref|NM_129437.2| Arabidopsis thaliana calmodulin binding AT2G38800 mRNA, complete
           cds
          Length = 2078

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 511 atcatcagaatcagtttcag 530
           ||||||||||||||||||||
Sbjct: 810 atcatcagaatcagtttcag 791

>gb|AC166352.1| Mus musculus BAC clone RP24-234M1 from chromosome 9, complete sequence
          Length = 166299

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    ggagacttttcaagctctac 385
              ||||||||||||||||||||
Sbjct: 147682 ggagacttttcaagctctac 147663

>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 527    tcagtatcttggtcatcaccagaa 550
              |||||||||| |||||||||||||
Sbjct: 338361 tcagtatctttgtcatcaccagaa 338384

>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 194234

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    agatggctagtaggtagattaata 73
             ||||||||||||||| ||||||||
Sbjct: 14767 agatggctagtaggttgattaata 14790

>gb|AC007133.7| Arabidopsis thaliana chromosome 2 clone F13I13 map CIC10A06, complete
            sequence
          Length = 21988

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 511  atcatcagaatcagtttcag 530
            ||||||||||||||||||||
Sbjct: 5933 atcatcagaatcagtttcag 5914

>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence
          Length = 180339

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 50    agatggctagtaggtagattaata 73
             ||||||||||||||| ||||||||
Sbjct: 76544 agatggctagtaggttgattaata 76521

>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    aataaaagtatacgttacaa 139
              ||||||||||||||||||||
Sbjct: 708282 aataaaagtatacgttacaa 708263

>gb|AF113545.1|AF113545 Nicotiana tabacum vacuole-associated annexin VCaB42 (Anx3) mRNA,
           complete cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 509 tcatcatcagaatcagtttc 528
           ||||||||||||||||||||
Sbjct: 716 tcatcatcagaatcagtttc 697

>gb|AE016831.1| Enterococcus faecalis V583 plasmid pTEF2, complete sequence
          Length = 57660

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   tgttcagattgtaatgaatt 274
             ||||||||||||||||||||
Sbjct: 49076 tgttcagattgtaatgaatt 49095

>gb|AC154277.1| Mus musculus BAC clone RP24-266G7 from 9, complete sequence
          Length = 168300

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ggagacttttcaagctctac 385
              ||||||||||||||||||||
Sbjct: 124123 ggagacttttcaagctctac 124142

>emb|AL591768.2|CNS07EGL Human chromosome 14 DNA sequence BAC R-274A16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 159567

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   atcatcatcagaatcagttt 527
             ||||||||||||||||||||
Sbjct: 96772 atcatcatcagaatcagttt 96791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,141,283
Number of Sequences: 3902068
Number of extensions: 6141283
Number of successful extensions: 114470
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114349
Number of HSP's gapped (non-prelim): 121
length of query: 710
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 687
effective length of database: 17,143,297,704
effective search space: 11777445522648
effective search space used: 11777445522648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)