ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105165.1| Zea mays PCO096233 mRNA sequence 96 2e-16
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 94 6e-16
3gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare str... 94 6e-16
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
5gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence 94 6e-16
6ref|XM_414043.1| PREDICTED: Gallus gallus similar to KIAA1007 pr... 84 6e-13
7emb|CR389308.1| Gallus gallus finished cDNA, clone ChEST727d10 84 6e-13
8ref|NM_197706.1| Oryza sativa (japonica cultivar-group) putative... 68 4e-08
9ref|NM_165678.2| Drosophila melanogaster CG1884-RB, transcript v... 62 2e-06
10ref|NM_136653.3| Drosophila melanogaster CG1884-RA, transcript v... 62 2e-06
11gb|AY058782.1| Drosophila melanogaster SD07194 full length cDNA 62 2e-06
12gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome 2R, r... 62 2e-06
13gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17... 62 2e-06
14gb|BT001446.1| Drosophila melanogaster GH26494 full insert cDNA 62 2e-06
15dbj|AK114219.1| Ciona intestinalis cDNA, clone:cicl047e16, full ... 60 9e-06
16ref|XM_511007.1| PREDICTED: Pan troglodytes LOC454137 (LOC454137... 54 5e-04
17ref|NM_016284.3| Homo sapiens CCR4-NOT transcription complex, su... 54 5e-04
18dbj|AK092885.1| Homo sapiens cDNA FLJ35566 fis, clone SPLEN20054... 54 5e-04
19dbj|AK075125.1| Homo sapiens cDNA FLJ90644 fis, clone PLACE1004168 54 5e-04
20dbj|AK056927.1| Homo sapiens cDNA FLJ32365 fis, clone PUAEN10001... 54 5e-04
21emb|BX537840.1|HSM805937 Homo sapiens mRNA; cDNA DKFZp686K24111 ... 54 5e-04
22emb|AL833549.1|HSM804862 Homo sapiens mRNA; cDNA DKFZp686N183 (f... 54 5e-04
23emb|AL832769.1|HSM804080 Homo sapiens mRNA; cDNA DKFZp686A017 (f... 54 5e-04
24gb|BC024317.1| Homo sapiens CCR4-NOT transcription complex, subu... 54 5e-04
25gb|BC027969.2| Homo sapiens CCR4-NOT transcription complex, subu... 54 5e-04
26gb|BC000779.2| Homo sapiens CCR4-NOT transcription complex, subu... 54 5e-04
27emb|AL117492.1|HSM801007 Homo sapiens mRNA; cDNA DKFZp434N241 (f... 54 5e-04
28dbj|AB023224.2| Homo sapiens mRNA for KIAA1007 protein, partial cds 54 5e-04
29ref|XM_848722.1| PREDICTED: Canis familiaris similar to CCR4-NOT... 50 0.008
30emb|CR749237.1| Homo sapiens mRNA; cDNA DKFZp686E0722 (from clon... 48 0.033
31gb|AC151481.4| Medicago truncatula clone mth2-3m11, complete seq... 46 0.13
32gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold 46 0.13
33gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 geno... 46 0.13
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
35gb|AF110778.1|AF110778 Homo sapiens adrenal gland protein AD-005... 46 0.13
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.13
37ref|XM_613555.2| PREDICTED: Bos taurus similar to CCR4-NOT trans... 44 0.51
38gb|AC009118.11| Homo sapiens chromosome 16 clone RP11-481J2, com... 44 0.51
39gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, compl... 44 0.51
40gb|AY780552.1| Uncultured Bacteroides sp. clone KB-1 1 16S ribos... 42 2.0
41gb|AC115867.12| Mus musculus chromosome 6, clone RP24-326P23, co... 42 2.0
42gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome... 42 2.0
43emb|CR547121.11| Zebrafish DNA sequence from clone DKEY-118G10 i... 42 2.0
44gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete s... 42 2.0
45gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome... 42 2.0
46emb|AJ493259.1|ABA493259 Acipenser baeri mRNA for keratin type I... 42 2.0
47dbj|AK162307.1| Mus musculus adult male colon cDNA, RIKEN full-l... 42 2.0
48emb|AL953914.11| Zebrafish DNA sequence from clone CH211-235I18 ... 42 2.0
49dbj|AB232559.1| Uncultured bacterium gene for 16S rRNA, partial ... 42 2.0
50dbj|AB195880.1| Uncultured bacterium gene for 16S rRNA, partial ... 42 2.0
51dbj|AB195879.1| Uncultured bacterium gene for 16S rRNA, partial ... 42 2.0
52emb|CT574154.1| Uncultured bacterium partial 16S rRNA gene from ... 42 2.0
53emb|CR933154.1| Uncultured bacterium partial 16S rRNA gene from ... 42 2.0
54emb|CR933316.1| Uncultured bacterium partial 16S rRNA gene from ... 42 2.0
55emb|CR933253.1| Uncultured bacterium partial 16S rRNA gene from ... 42 2.0
56emb|AL627406.15| Mouse DNA sequence from clone RP23-188A12 on ch... 42 2.0
57gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome ... 40 7.9
58gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, com... 40 7.9
59gb|AY808457.1| Schistosoma japonicum SJCHGC06469 protein mRNA, p... 40 7.9
60emb|CR932175.1|CNS0KYGO Paramecium tetraurelia macronuclear, put... 40 7.9
61gb|AC110920.10| Mus musculus chromosome 12, clone RP23-328I23, c... 40 7.9
62gb|AC159807.2| Mus musculus BAC clone RP24-399D3 from chromosome... 40 7.9
63gb|AC106898.5| Homo sapiens BAC clone RP11-310K19 from 4, comple... 40 7.9
64gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, comp... 40 7.9
65emb|BX323448.7| Zebrafish DNA sequence from clone CH211-145B13 i... 40 7.9
66gb|AC154660.2| Mus musculus BAC clone RP24-271M20 from chromosom... 40 7.9
67gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Canc... 40 7.9
68gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, comp... 40 7.9
69dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.9
70gb|AC110258.25| Mus musculus chromosome 6, clone RP23-281L18, co... 40 7.9
71emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chro... 40 7.9
72gb|AC101950.11| Mus musculus chromosome 1, clone RP24-149K4, com... 40 7.9
73emb|Z81031.1|CEC02D4 Caenorhabditis elegans Cosmid C02D4, comple... 40 7.9
74dbj|AP003041.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
75emb|AL589670.21| Mouse DNA sequence from clone RP23-414K1 on chr... 40 7.9 
>gb|AY105165.1| Zea mays PCO096233 mRNA sequence
          Length = 416

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 135/164 (82%)
 Strand = Plus / Minus

                                                                       
Query: 193 catgactttgccaccgactcaaacagctgtttaatctcaggcgcgcagtgtgtgaaggat 252
           |||||| ||||||||||||| ||||| |  |  |||||||| || |||||||| || || 
Sbjct: 172 catgaccttgccaccgactcgaacagtttctcgatctcaggtgcacagtgtgtaaaagac 113

                                                                       
Query: 253 cggttccaaaagttgtagcgcgggttctttatcagctcgatgaaggtaatgagtaatccc 312
           ||| ||||||||||||| ||||| ||||||||||  || ||||| ||||| ||||| |||
Sbjct: 112 cggctccaaaagttgtaacgcggattctttatcaattcaatgaaagtaataagtaacccc 53

                                                       
Query: 313 caggggtgaggacggttcactatcagacgttccaagagaaccct 356
           || || || || ||||||||||| ||||| ||||  ||||||||
Sbjct: 52  caaggatgggggcggttcactatgagacgctccagaagaaccct 9
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Minus

                                                                          
Query: 380    cctgggtagcttcggcaaatagatacagtatgatgaaggagaagtagtgtgtgtggctat 439
              ||||||||||||| | ||| |||| ||| ||||||||| ||||| ||||||| ||| |||
Sbjct: 147975 cctgggtagcttctgaaaacagatgcaggatgatgaagtagaagcagtgtgtatggatat 147916

                                                                          
Query: 440    tcgggtagcgcagttggttagcgatcgcattcaaaaataggtagcgcccctctgtatcca 499
              | ||||| ||||| |||||||| || ||||||||||  ||||| || |||||||| ||||
Sbjct: 147915 tagggtaacgcagctggttagctattgcattcaaaacaaggtaccggccctctgtgtcca 147856

                 
Query: 500    agt 502
              |||
Sbjct: 147855 agt 147853



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 305    gtaatccccaggggtgaggacggttcactatcagacgttccaagagaaccctggttacct 364
              |||| ||||| || ||||||||  ||||||  ||||||||||||| ||||||  ||| ||
Sbjct: 148145 gtaagccccaaggatgaggacgtctcactactagacgttccaagataaccctcattatct 148086

                         
Query: 365    gctcctggata 375
              | |||||||||
Sbjct: 148085 gatcctggata 148075
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>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0079B22, from chromosome 3, complete sequence
          Length = 156933

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Minus

                                                                         
Query: 380   cctgggtagcttcggcaaatagatacagtatgatgaaggagaagtagtgtgtgtggctat 439
             ||||||||||||| | ||| |||| ||| ||||||||| ||||| ||||||| ||| |||
Sbjct: 81975 cctgggtagcttctgaaaacagatgcaggatgatgaagtagaagcagtgtgtatggatat 81916

                                                                         
Query: 440   tcgggtagcgcagttggttagcgatcgcattcaaaaataggtagcgcccctctgtatcca 499
             | ||||| ||||| |||||||| || ||||||||||  ||||| || |||||||| ||||
Sbjct: 81915 tagggtaacgcagctggttagctattgcattcaaaacaaggtaccggccctctgtgtcca 81856

                
Query: 500   agt 502
             |||
Sbjct: 81855 agt 81853



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 305   gtaatccccaggggtgaggacggttcactatcagacgttccaagagaaccctggttacct 364
             |||| ||||| || ||||||||  ||||||  ||||||||||||| ||||||  ||| ||
Sbjct: 82145 gtaagccccaaggatgaggacgtctcactactagacgttccaagataaccctcattatct 82086

                        
Query: 365   gctcctggata 375
             | |||||||||
Sbjct: 82085 gatcctggata 82075
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Minus

                                                                          
Query: 380    cctgggtagcttcggcaaatagatacagtatgatgaaggagaagtagtgtgtgtggctat 439
              ||||||||||||| | ||| |||| ||| ||||||||| ||||| ||||||| ||| |||
Sbjct: 147975 cctgggtagcttctgaaaacagatgcaggatgatgaagtagaagcagtgtgtatggatat 147916

                                                                          
Query: 440    tcgggtagcgcagttggttagcgatcgcattcaaaaataggtagcgcccctctgtatcca 499
              | ||||| ||||| |||||||| || ||||||||||  ||||| || |||||||| ||||
Sbjct: 147915 tagggtaacgcagctggttagctattgcattcaaaacaaggtaccggccctctgtgtcca 147856

                 
Query: 500    agt 502
              |||
Sbjct: 147855 agt 147853



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 305    gtaatccccaggggtgaggacggttcactatcagacgttccaagagaaccctggttacct 364
              |||| ||||| || ||||||||  ||||||  ||||||||||||| ||||||  ||| ||
Sbjct: 148145 gtaagccccaaggatgaggacgtctcactactagacgttccaagataaccctcattatct 148086

                         
Query: 365    gctcctggata 375
              | |||||||||
Sbjct: 148085 gatcctggata 148075
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>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence
          Length = 162241

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 104/123 (84%)
 Strand = Plus / Plus

                                                                          
Query: 380    cctgggtagcttcggcaaatagatacagtatgatgaaggagaagtagtgtgtgtggctat 439
              ||||||||||||| | ||| |||| ||| ||||||||| ||||| ||||||| ||| |||
Sbjct: 114643 cctgggtagcttctgaaaacagatgcaggatgatgaagtagaagcagtgtgtatggatat 114702

                                                                          
Query: 440    tcgggtagcgcagttggttagcgatcgcattcaaaaataggtagcgcccctctgtatcca 499
              | ||||| ||||| |||||||| || ||||||||||  ||||| || |||||||| ||||
Sbjct: 114703 tagggtaacgcagctggttagctattgcattcaaaacaaggtaccggccctctgtgtcca 114762

                 
Query: 500    agt 502
              |||
Sbjct: 114763 agt 114765



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                          
Query: 305    gtaatccccaggggtgaggacggttcactatcagacgttccaagagaaccctggttacct 364
              |||| ||||| || ||||||||  ||||||  ||||||||||||| ||||||  ||| ||
Sbjct: 114473 gtaagccccaaggatgaggacgtctcactactagacgttccaagataaccctcattatct 114532

                         
Query: 365    gctcctggata 375
              | |||||||||
Sbjct: 114533 gatcctggata 114543
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>ref|XM_414043.1| PREDICTED: Gallus gallus similar to KIAA1007 protein; adrenal gland
            protein AD-005 (LOC415676), mRNA
          Length = 6947

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 274  gggttctttatcagctcgatgaaggtaatgagtaatccccaggggtgaggacggttcact 333
            ||||| ||||||||||||||||| |||||||| |  |||||||| ||||| |  || || 
Sbjct: 6814 gggttttttatcagctcgatgaaagtaatgaggagaccccagggatgaggcctatttaca 6755

                                                      
Query: 334  atcagacgttccaagagaaccctggttacctgctcctggata 375
            ||||| ||||||||||||||||| || | |||||||||||||
Sbjct: 6754 atcagtcgttccaagagaacccttgtgatctgctcctggata 6713
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>emb|CR389308.1| Gallus gallus finished cDNA, clone ChEST727d10
          Length = 1680

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                        
Query: 274  gggttctttatcagctcgatgaaggtaatgagtaatccccaggggtgaggacggttcact 333
            ||||| ||||||||||||||||| |||||||| |  |||||||| ||||| |  || || 
Sbjct: 1209 gggttttttatcagctcgatgaaagtaatgaggagaccccagggatgaggcctatttaca 1150

                                                      
Query: 334  atcagacgttccaagagaaccctggttacctgctcctggata 375
            ||||| ||||||||||||||||| || | |||||||||||||
Sbjct: 1149 atcagtcgttccaagagaacccttgtgatctgctcctggata 1108
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>ref|NM_197706.1| Oryza sativa (japonica cultivar-group) putative transcription
            regulatory protein (OSJNBa0010C11.3), mRNA
          Length = 7478

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 165/206 (80%), Gaps = 2/206 (0%)
 Strand = Plus / Minus

                                                                        
Query: 266  tgtagcgcgggttctttatcagctcgatgaaggtaatgagtaatccccaggggtgaggac 325
            ||||||| || |||||||| ||||| ||||| ||||| ||||  ||||| |||||||| |
Sbjct: 6967 tgtagcgtggattctttataagctcaatgaaagtaattagtagcccccacgggtgagggc 6908

                                                                        
Query: 326  ggttcactatcagacgttccaagagaaccctggttacctgctcctgga-tatgttcctgg 384
            |||| ||||| || |||||||  || ||||| ||||  |||||||||| ||| |||||||
Sbjct: 6907 ggttaactattagccgttccagaagtaccctagttatttgctcctggactat-ttcctgg 6849

                                                                        
Query: 385  gtagcttcggcaaatagatacagtatgatgaaggagaagtagtgtgtgtggctattcggg 444
             | || || | ||| |  || || || |||||||| || |||||||||||| | || || 
Sbjct: 6848 tttgcctcagaaaacaagtaaagaattatgaaggaaaaatagtgtgtgtggttgtttgga 6789

                                      
Query: 445  tagcgcagttggttagcgatcgcatt 470
            |||||||| ||||| || ||||||||
Sbjct: 6788 tagcgcagctggttggcaatcgcatt 6763
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>ref|NM_165678.2| Drosophila melanogaster CG1884-RB, transcript variant B (CG1884),
            mRNA
          Length = 7634

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 6284 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 6225

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| ||||||||||
Sbjct: 6224 atagcgaccctccgtatccaagt 6202
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>ref|NM_136653.3| Drosophila melanogaster CG1884-RA, transcript variant A (CG1884),
            mRNA
          Length = 7640

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 6290 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 6231

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| ||||||||||
Sbjct: 6230 atagcgaccctccgtatccaagt 6208
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>gb|AY058782.1| Drosophila melanogaster SD07194 full length cDNA
          Length = 2621

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 1833 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 1774

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| ||||||||||
Sbjct: 1773 atagcgaccctccgtatccaagt 1751
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>gb|AC006472.2|AC006472 Drosophila melanogaster, chromosome 2R, region 45E1-46A2, BAC clone
             BACR48G21, complete sequence
          Length = 156346

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                         
Query: 420   gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
             ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 80400 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 80341

                                    
Query: 480   gtagcgcccctctgtatccaagt 502
              ||||| ||||| ||||||||||
Sbjct: 80340 atagcgaccctccgtatccaagt 80318
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>gb|AE003833.4| Drosophila melanogaster chromosome 2R, section 17 of 73 of the complete
              sequence
          Length = 297107

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Plus

                                                                          
Query: 420    gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
              ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 260057 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 260116

                                     
Query: 480    gtagcgcccctctgtatccaagt 502
               ||||| ||||| ||||||||||
Sbjct: 260117 atagcgaccctccgtatccaagt 260139
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>gb|BT001446.1| Drosophila melanogaster GH26494 full insert cDNA
          Length = 2497

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 70/83 (84%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| |||||||| || || |||||||  ||||| || ||||||||||| || ||
Sbjct: 1703 gaagtagtgcgtgtggctgttgggatagcgcaactggttcgcaatcgcattcaagaacag 1644

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| ||||||||||
Sbjct: 1643 atagcgaccctccgtatccaagt 1621
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>dbj|AK114219.1| Ciona intestinalis cDNA, clone:cicl047e16, full insert sequence
          Length = 3824

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                        
Query: 421  aagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatagg 480
            |||||||| |||||||| || || || ||||| ||||| ||||| ||||||||||| | |
Sbjct: 3437 aagtagtgagtgtggctgtttggataacgcagctggtttgcgatagcattcaaaaacaag 3378

                                  
Query: 481  tagcgcccctctgtatccaagt 502
            ||||| || || ||||||||||
Sbjct: 3377 tagcgaccttcagtatccaagt 3356
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>ref|XM_511007.1| PREDICTED: Pan troglodytes LOC454137 (LOC454137), mRNA
          Length = 7209

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 6930 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 6871

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 6870 atagcgaccctcagtgtccaagt 6848
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>ref|NM_016284.3| Homo sapiens CCR4-NOT transcription complex, subunit 1 (CNOT1),
            transcript variant 1, mRNA
          Length = 8449

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 7145 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 7086

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 7085 atagcgaccctcagtgtccaagt 7063
to top
>dbj|AK092885.1| Homo sapiens cDNA FLJ35566 fis, clone SPLEN2005474, weakly similar to
            GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 1
          Length = 2282

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 1729 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 1670

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 1669 atagcgaccctcagtgtccaagt 1647
to top
>dbj|AK075125.1| Homo sapiens cDNA FLJ90644 fis, clone PLACE1004168
          Length = 2637

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 2484 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 2425

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 2424 atagcgaccctcagtgtccaagt 2402
to top
>dbj|AK056927.1| Homo sapiens cDNA FLJ32365 fis, clone PUAEN1000161, weakly similar to
            GENERAL NEGATIVE REGULATOR OF TRANSCRIPTION SUBUNIT 1
          Length = 4068

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 3515 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 3456

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 3455 atagcgaccctcagtgtccaagt 3433
to top
>emb|BX537840.1|HSM805937 Homo sapiens mRNA; cDNA DKFZp686K24111 (from clone DKFZp686K24111);
            complete cds
          Length = 7848

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 7299 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 7240

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 7239 atagcgaccctcagtgtccaagt 7217
to top
>emb|AL833549.1|HSM804862 Homo sapiens mRNA; cDNA DKFZp686N183 (from clone DKFZp686N183)
          Length = 7701

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 7144 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 7085

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 7084 atagcgaccctcagtgtccaagt 7062
to top
>emb|AL832769.1|HSM804080 Homo sapiens mRNA; cDNA DKFZp686A017 (from clone DKFZp686A017)
          Length = 7687

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 7134 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 7075

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 7074 atagcgaccctcagtgtccaagt 7052
to top
>gb|BC024317.1| Homo sapiens CCR4-NOT transcription complex, subunit 1, mRNA (cDNA
            clone IMAGE:3913601), partial cds
          Length = 5137

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 4584 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 4525

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 4524 atagcgaccctcagtgtccaagt 4502
to top
>gb|BC027969.2| Homo sapiens CCR4-NOT transcription complex, subunit 1, mRNA (cDNA
           clone IMAGE:5225775)
          Length = 1413

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                       
Query: 420 gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
           ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 799 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 740

                                  
Query: 480 gtagcgcccctctgtatccaagt 502
            ||||| ||||| || |||||||
Sbjct: 739 atagcgaccctcagtgtccaagt 717
to top
>gb|BC000779.2| Homo sapiens CCR4-NOT transcription complex, subunit 1, mRNA (cDNA
            clone IMAGE:3504586), partial cds
          Length = 1907

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 1343 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 1284

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 1283 atagcgaccctcagtgtccaagt 1261
to top
>emb|AL117492.1|HSM801007 Homo sapiens mRNA; cDNA DKFZp434N241 (from clone DKFZp434N241);
            partial cds
          Length = 3572

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 3024 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 2965

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 2964 atagcgaccctcagtgtccaagt 2942
to top
>dbj|AB023224.2| Homo sapiens mRNA for KIAA1007 protein, partial cds
          Length = 6518

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 5230 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 5171

                                   
Query: 480  gtagcgcccctctgtatccaagt 502
             ||||| ||||| || |||||||
Sbjct: 5170 atagcgaccctcagtgtccaagt 5148
to top
>ref|XM_848722.1| PREDICTED: Canis familiaris similar to CCR4-NOT transcription
            complex, subunit 1 isoform a (LOC612978), mRNA
          Length = 2291

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattca 472
            ||||||||| ||||||||||| ||||| |||||||| || || || |||||||
Sbjct: 1516 gaagtagtgagtgtggctatttgggtaccgcagttgatttgcaatggcattca 1464
to top
>emb|CR749237.1| Homo sapiens mRNA; cDNA DKFZp686E0722 (from clone DKFZp686E0722)
          Length = 7428

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 60/72 (83%)
 Strand = Plus / Minus

                                                                        
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
            ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 6123 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 6064

                        
Query: 480  gtagcgcccctc 491
             ||||| |||||
Sbjct: 6063 atagcgaccctc 6052
to top
>gb|AC151481.4| Medicago truncatula clone mth2-3m11, complete sequence
          Length = 99012

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 415   aaggagaagtagtgtgtgtggctattcgggtagcgcagttggttagc 461
             ||||||||||||||||||||  |||| || || || |||||||||||
Sbjct: 51187 aaggagaagtagtgtgtgtgagtattgggataacgtagttggttagc 51141
to top
>gb|DP000063.1| Oryctolagus cuniculus target 117 genomic scaffold
          Length = 489372

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 159    gccatcatccactgcttttccag 181
              |||||||||||||||||||||||
Sbjct: 312232 gccatcatccactgcttttccag 312254
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>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete
             sequence
          Length = 147117

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                        
Query: 412   atgaaggagaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcatt 470
             |||||||| || |||||||||||| | || || |||||||| ||||| || ||||||||
Sbjct: 41086 atgaaggaaaaatagtgtgtgtggttgtttggatagcgcagctggttggcaatcgcatt 41144
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 412      atgaaggagaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcatt 470
                |||||||| || |||||||||||| | || || |||||||| ||||| || ||||||||
Sbjct: 21366073 atgaaggaaaaatagtgtgtgtggttgtttggatagcgcagctggttggcaatcgcatt 21366131
to top
>gb|AF110778.1|AF110778 Homo sapiens adrenal gland protein AD-005 mRNA, complete cds
          Length = 2274

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 69/83 (83%), Gaps = 1/83 (1%)
 Strand = Plus / Minus

                                                                       
Query: 420 gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
           ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 961 gaagtagtgagtgtggctatttgggtaccggag-tgatttgcaattgcattcaaaaagag 903

                                  
Query: 480 gtagcgcccctctgtatccaagt 502
            ||||| ||||| || |||||||
Sbjct: 902 atagcgaccctcagtgtccaagt 880
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Plus

                                                                           
Query: 412      atgaaggagaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcatt 470
                |||||||| || |||||||||||| | || || |||||||| ||||| || ||||||||
Sbjct: 21377336 atgaaggaaaaatagtgtgtgtggttgtttggatagcgcagctggttggcaatcgcatt 21377394
to top
>ref|XM_613555.2| PREDICTED: Bos taurus similar to CCR4-NOT transcription complex,
            subunit 1 isoform a (LOC533968), mRNA
          Length = 7510

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                  
Query: 420  gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaa 473
            ||||||||| ||||||||||| ||||| ||||| || || || || ||||||||
Sbjct: 6822 gaagtagtgagtgtggctatttgggtaccgcagctgatttgcaattgcattcaa 6769
to top
>gb|AC009118.11| Homo sapiens chromosome 16 clone RP11-481J2, complete sequence
          Length = 187988

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 420   gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
             ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 25136 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 25077

                   
Query: 480   gtagcg 485
              |||||
Sbjct: 25076 atagcg 25071
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>gb|AC010287.9| Homo sapiens chromosome 16 clone CTA-331F8, complete sequence
          Length = 198949

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 420   gaagtagtgtgtgtggctattcgggtagcgcagttggttagcgatcgcattcaaaaatag 479
             ||||||||| ||||||||||| ||||| || || || || || || ||||||||||| ||
Sbjct: 18060 gaagtagtgagtgtggctatttgggtaccggagctgatttgcaattgcattcaaaaagag 18119

                   
Query: 480   gtagcg 485
              |||||
Sbjct: 18120 atagcg 18125
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>gb|AY780552.1| Uncultured Bacteroides sp. clone KB-1 1 16S ribosomal RNA gene,
            partial sequence
          Length = 1484

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1246 ggtagcgcccctctgtatcca 1226
to top
>gb|AC115867.12| Mus musculus chromosome 6, clone RP24-326P23, complete sequence
          Length = 162067

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   atttgaaaatttcagtggctg 535
             |||||||||||||||||||||
Sbjct: 64339 atttgaaaatttcagtggctg 64319
to top
>gb|AC122429.3| Mus musculus BAC clone RP24-175I3 from chromosome 6, complete sequence
          Length = 188069

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 515    atttgaaaatttcagtggctg 535
              |||||||||||||||||||||
Sbjct: 183428 atttgaaaatttcagtggctg 183408
to top
>emb|CR547121.11| Zebrafish DNA sequence from clone DKEY-118G10 in linkage group 8,
             complete sequence
          Length = 76347

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 538   tcaatctgaaaaatatccatt 558
             |||||||||||||||||||||
Sbjct: 13491 tcaatctgaaaaatatccatt 13511
to top
>gb|AC152407.19| Medicago truncatula clone mth2-77l23, complete sequence
          Length = 113470

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    cagttacaatactatgataca 53
             |||||||||||||||||||||
Sbjct: 52158 cagttacaatactatgataca 52178
to top
>gb|AC164636.4| Mus musculus BAC clone RP23-70P16 from chromosome 6, complete sequence
          Length = 212096

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 515   atttgaaaatttcagtggctg 535
             |||||||||||||||||||||
Sbjct: 45301 atttgaaaatttcagtggctg 45281
to top
>emb|AJ493259.1|ABA493259 Acipenser baeri mRNA for keratin type IE (krt14 gene)
          Length = 1858

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1058 ggtagcgcccctctgtatcca 1038
to top
>dbj|AK162307.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030605K01 product:oxysterol binding
           protein-like 9, full insert sequence
          Length = 1921

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  acaaaacaaatctgccagcaa 71
           |||||||||||||||||||||
Sbjct: 567 acaaaacaaatctgccagcaa 547
to top
>emb|AL953914.11| Zebrafish DNA sequence from clone CH211-235I18 in linkage group 8,
              complete sequence
          Length = 151737

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 538    tcaatctgaaaaatatccatt 558
              |||||||||||||||||||||
Sbjct: 105043 tcaatctgaaaaatatccatt 105023
to top
>dbj|AB232559.1| Uncultured bacterium gene for 16S rRNA, partial sequence,
           clone:MPA2
          Length = 1116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 479 ggtagcgcccctctgtatcca 499
           |||||||||||||||||||||
Sbjct: 897 ggtagcgcccctctgtatcca 877
to top
>dbj|AB195880.1| Uncultured bacterium gene for 16S rRNA, partial sequence
          Length = 1440

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1207 ggtagcgcccctctgtatcca 1187
to top
>dbj|AB195879.1| Uncultured bacterium gene for 16S rRNA, partial sequence
          Length = 1448

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1244 ggtagcgcccctctgtatcca 1224
to top
>emb|CT574154.1| Uncultured bacterium partial 16S rRNA gene from clone 060G06_B_SD_P93
          Length = 1299

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1173 ggtagcgcccctctgtatcca 1153
to top
>emb|CR933154.1| Uncultured bacterium partial 16S rRNA gene from clone 009G12_B_SD_P15
          Length = 1354

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1210 ggtagcgcccctctgtatcca 1190
to top
>emb|CR933316.1| Uncultured bacterium partial 16S rRNA gene from clone 060B03_B_SD_P93
          Length = 1310

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1184 ggtagcgcccctctgtatcca 1164
to top
>emb|CR933253.1| Uncultured bacterium partial 16S rRNA gene from clone 053G03_B_DI_P58
          Length = 1290

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 479  ggtagcgcccctctgtatcca 499
            |||||||||||||||||||||
Sbjct: 1164 ggtagcgcccctctgtatcca 1144
to top
>emb|AL627406.15| Mouse DNA sequence from clone RP23-188A12 on chromosome 4, complete
             sequence
          Length = 155214

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    acaaaacaaatctgccagcaa 71
             |||||||||||||||||||||
Sbjct: 88503 acaaaacaaatctgccagcaa 88523
to top
>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence
          Length = 209896

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   agaagtagtgtgtgtggcta 438
             ||||||||||||||||||||
Sbjct: 16645 agaagtagtgtgtgtggcta 16626
to top
>gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, complete sequence
          Length = 209108

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     tgatacaaaacaaatctgcc 66
              ||||||||||||||||||||
Sbjct: 117169 tgatacaaaacaaatctgcc 117188
to top
>gb|AY808457.1| Schistosoma japonicum SJCHGC06469 protein mRNA, partial cds
          Length = 796

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 509 caagatatttgaaaatttca 528
           ||||||||||||||||||||
Sbjct: 405 caagatatttgaaaatttca 424
to top
>emb|CR932175.1|CNS0KYGO Paramecium tetraurelia macronuclear, putative gene for the
           regulatory beta-subunit of casein kinase 2, isoform 1-2,
           complete gene
          Length = 968

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 406 agtatgatgaaggagaagta 425
           ||||||||||||||||||||
Sbjct: 446 agtatgatgaaggagaagta 465
to top
>gb|AC110920.10| Mus musculus chromosome 12, clone RP23-328I23, complete sequence
          Length = 223308

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 510    aagatatttgaaaatttcag 529
              ||||||||||||||||||||
Sbjct: 137416 aagatatttgaaaatttcag 137397
to top
>gb|AC159807.2| Mus musculus BAC clone RP24-399D3 from chromosome 12, complete sequence
          Length = 131785

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   gctcctggatatgttcctgg 384
             ||||||||||||||||||||
Sbjct: 51565 gctcctggatatgttcctgg 51546
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>gb|AC106898.5| Homo sapiens BAC clone RP11-310K19 from 4, complete sequence
          Length = 171846

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 542   tctgaaaaatatccattgta 561
             ||||||||||||||||||||
Sbjct: 73668 tctgaaaaatatccattgta 73687
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>gb|AC024086.5| Homo sapiens chromosome 7 clone RP11-242F21, complete sequence
          Length = 153232

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    atgatgaaggagaagtagtg 428
              ||||||||||||||||||||
Sbjct: 101977 atgatgaaggagaagtagtg 101996
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>emb|BX323448.7| Zebrafish DNA sequence from clone CH211-145B13 in linkage group 1,
             complete sequence
          Length = 150073

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 492   tgtatccaagtttgttacaa 511
             ||||||||||||||||||||
Sbjct: 35192 tgtatccaagtttgttacaa 35211
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>gb|AC154660.2| Mus musculus BAC clone RP24-271M20 from chromosome 14, complete
             sequence
          Length = 172152

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   gtttgttacaagatatttga 520
             ||||||||||||||||||||
Sbjct: 43432 gtttgttacaagatatttga 43451
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>gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207904

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     atactatgatacaaaacaaa 60
              ||||||||||||||||||||
Sbjct: 184435 atactatgatacaaaacaaa 184416
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>gb|AC009358.6|AC009358 Human Chromosome 7 clone RP11-191E5, complete sequence
          Length = 185124

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 409   atgatgaaggagaagtagtg 428
             ||||||||||||||||||||
Sbjct: 98382 atgatgaaggagaagtagtg 98401
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 175     tttccagcggctccaccgca 194
               ||||||||||||||||||||
Sbjct: 5941757 tttccagcggctccaccgca 5941738
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>gb|AC110258.25| Mus musculus chromosome 6, clone RP23-281L18, complete sequence
          Length = 169146

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    atactatgatacaaaacaaa 60
             ||||||||||||||||||||
Sbjct: 92291 atactatgatacaaaacaaa 92310
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>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete
             sequence
          Length = 218673

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   agaagtagtgtgtgtggcta 438
             ||||||||||||||||||||
Sbjct: 92701 agaagtagtgtgtgtggcta 92720
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>gb|AC101950.11| Mus musculus chromosome 1, clone RP24-149K4, complete sequence
          Length = 161262

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    acaatactatgatacaaaacaaat 61
             |||| |||||||||||||||||||
Sbjct: 84521 acaaaactatgatacaaaacaaat 84498
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>emb|Z81031.1|CEC02D4 Caenorhabditis elegans Cosmid C02D4, complete sequence
          Length = 28611

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 537  ttcaatctgaaaaatatcca 556
            ||||||||||||||||||||
Sbjct: 6085 ttcaatctgaaaaatatcca 6104
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>dbj|AP003041.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-567M21, complete
              sequence
          Length = 188172

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 538    tcaatctgaaaaatatccattgta 561
              ||||||||||||||||| ||||||
Sbjct: 128275 tcaatctgaaaaatatcaattgta 128252
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>emb|AL589670.21| Mouse DNA sequence from clone RP23-414K1 on chromosome 15, complete
              sequence
          Length = 203230

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    taatgagtaatccccagggg 318
              ||||||||||||||||||||
Sbjct: 122799 taatgagtaatccccagggg 122780


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,049,934
Number of Sequences: 3902068
Number of extensions: 5049934
Number of successful extensions: 88558
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88305
Number of HSP's gapped (non-prelim): 252
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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