ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full ... 844 0.0
2ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA 295 8e-77
3dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 8e-77
4dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 8e-77
5gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reduct... 293 3e-76
6gb|AY109096.1| Zea mays PCO119715 mRNA sequence 285 8e-74
7dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 281 1e-72
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 202 9e-49
9gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom... 202 9e-49
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 202 9e-49
11gb|BT019001.1| Zea mays clone Contig489.F mRNA sequence 68 4e-08
12ref|XM_362588.1| Magnaporthe grisea 70-15 hypothetical protein (... 56 1e-04
13gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 54 5e-04
14ref|XM_568023.1| Cryptococcus neoformans var. neoformans JEC21 m... 54 5e-04
15dbj|AK058876.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
16ref|XM_953671.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.13
17ref|XM_329903.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.13
18emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig... 46 0.13
19gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome... 44 0.52
20ref|XM_535405.2| PREDICTED: Canis familiaris similar to Methylen... 44 0.52
21gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome ... 44 0.52
22ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 42 2.0
23ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 42 2.0
24ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr... 42 2.0
25ref|XM_594291.2| PREDICTED: Bos taurus hypothetical LOC516149 (L... 42 2.0
26gb|BC110162.1| Bos taurus hypothetical LOC516149, mRNA (cDNA clo... 42 2.0
27gb|BC084479.1| Xenopus tropicalis hypothetical LOC496500, mRNA (... 42 2.0
28gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydro... 42 2.0
29gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydro... 42 2.0
30emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B... 42 2.0
31gb|AF441241.2| Synthetic construct chimera1 mRNA, complete cds 42 2.0
32emb|BX825865.1|CNS0A52W Arabidopsis thaliana Full-length cDNA Co... 42 2.0
33gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrof... 42 2.0
34ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydr... 40 8.1
35gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete seq... 40 8.1
36emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylene... 40 8.1
37gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete... 40 8.1
38ref|XM_500349.1| Yarrowia lipolytica CLIB122, YALI0B00572g predi... 40 8.1
39emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on ch... 40 8.1
40emb|AL138807.12| Human DNA sequence from clone RP5-827A12 on chr... 40 8.1
41gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, co... 40 8.1
42gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 8.1
43gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 8.1
44gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, com... 40 8.1
45gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenete... 40 8.1
46gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cance... 40 8.1
47gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrof... 40 8.1
48gb|AC115003.18| Mus musculus chromosome 6, clone RP24-179P9, com... 40 8.1
49gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, co... 40 8.1
50emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 8.1 
>gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full insert mRNA sequence
          Length = 1653

 Score =  844 bits (426), Expect = 0.0
 Identities = 557/599 (92%), Gaps = 10/599 (1%)
 Strand = Plus / Minus

                                                                        
Query: 5    gagtggtttggataaatccgacacaaat-acgacagatcgtatnacaggattctaacgaa 63
            |||||||||||||||||| |||| |||| |||||| ||| ||| |||||| |||| ||||
Sbjct: 1505 gagtggtttggataaatc-gacagaaatcacgacaaatcatattacaggactctagcgaa 1447

                                                                        
Query: 64   gggcggtcaaac-------act-taagatatcatcgaaattagatctccttgaatgcagc 115
            ||||||||||||       ||| |||| | ||||||||||||||||||||||||||||||
Sbjct: 1446 gggcggtcaaacgcagcatactgtaaggtctcatcgaaattagatctccttgaatgcagc 1387

                                                                        
Query: 116  aaagaggtccccgctgatgtagtcattgtccacaaggctgaccaggcaataggtcttctg 175
            ||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||
Sbjct: 1386 aaagaggtccccgctgatgtagtcattgtccacgaggctgaccaagtaatagctcttctg 1327

                                                                        
Query: 176  cacctgctctagcaactccctggatgagtcaccctccgggaacaggcaggcccatcccct 235
             | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 1326 aatctgctctagcaactccctggacgagtcgccctctgggaacaggcaggcccatcccct 1267

                                                                        
Query: 236  ggaccagatctcaaacgcttcatctttccaaaccatgaagctcgccgagtcaacgacggt 295
            |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1266 ggaccagatctcaaacgcttcatctttccagaccatgaagctcgctgagtcaacgacggt 1207

                                                                        
Query: 296  aggctggatgatctccttgccggggaacacgccccaagtgacagcgttcacggcgttcgc 355
            |||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct: 1206 aggctggatgatctccttgccggggaacacaccccatgtgacagcattcacggcgttcgc 1147

                                                                        
Query: 356  agggatgtttgagatcgattccccttccttgttcaccgcgatgtatgtgagggaagggaa 415
            |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 1146 agggatgtttgagatcgattccccttccttgttcacggcgatgtacgtgagggaagggaa 1087

                                                                        
Query: 416  tgccttgctcttctcgatgagttggtccagcttctccttagcgcagaagaattcnacgta 475
            ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 1086 tgccttgctcttctcgatgagttggcccagcttctccttagcgcagaagaattcgacgta 1027

                                                                        
Query: 476  ggccttttggtaaacatagnctcctggaccgccccatccaacactaggagactcagattt 535
            |||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1026 ggccttctggtaaacatagcctcctgggccgccccatccaacactaggagactcagattt 967

                                                                       
Query: 536  ctctgcatttacagcaggttggctgttgatggtnaggaaaccctttgagttcatnttca 594
            ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||
Sbjct: 966  ctctgcatttacagcaggttggctgttgatggtaaggaaaccctttgagttaatcttca 908
to top
>ref|XM_470089.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2167

 Score =  295 bits (149), Expect = 8e-77
 Identities = 398/482 (82%)
 Strand = Plus / Minus

                                                                        
Query: 99   atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
            ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 1847 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 1788

                                                                        
Query: 159  aggcaataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaac 218
            | | | ||| ||||||| ||||  ||||| | |||||| |||||||| ||||| ||||||
Sbjct: 1787 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 1728

                                                                        
Query: 219  aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 278
            ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 1727 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 1668

                                                                        
Query: 279  gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 338
            || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 1667 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 1608

                                                                        
Query: 339  gcgttcacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatg 398
            || ||||| ||||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 1607 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 1548

                                                                        
Query: 399  tatgtgagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcg 458
            ||||| || ||||||||||||||||||||||| || || || ||||||||||| || |  
Sbjct: 1547 tatgtaagagaagggaatgccttgctcttctcaattagctgatccagcttctcttttgaa 1488

                                                                        
Query: 459  cagaagaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaaca 518
            |||||||| || |  |||||||| |||||||||||| |||| ||||| ||||||||||||
Sbjct: 1487 cagaagaactcaagataggccttctggtaaacatagcctccaggaccaccccatccaaca 1428

                                                                        
Query: 519  ctaggagactcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccc 578
            || |  || |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 1427 cttgttgaatcagatctctctccattaacagcaggttggctgttaatggtaaggaagccc 1368

              
Query: 579  tt 580
            ||
Sbjct: 1367 tt 1366
to top
>dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C07, full
           insert sequence
          Length = 1119

 Score =  295 bits (149), Expect = 8e-77
 Identities = 398/482 (82%)
 Strand = Plus / Minus

                                                                       
Query: 99  atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
           ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 909 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 850

                                                                       
Query: 159 aggcaataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaac 218
           | | | ||| ||||||| ||||  ||||| | |||||| |||||||| ||||| ||||||
Sbjct: 849 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 790

                                                                       
Query: 219 aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 278
           ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 789 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 730

                                                                       
Query: 279 gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 338
           || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 729 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 670

                                                                       
Query: 339 gcgttcacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatg 398
           || ||||| ||||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 669 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 610

                                                                       
Query: 399 tatgtgagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcg 458
           ||||| || ||||||||||||||||||||||| || || || ||||||||||| || |  
Sbjct: 609 tatgtaagagaagggaatgccttgctcttctcaattagctgatccagcttctcttttgaa 550

                                                                       
Query: 459 cagaagaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaaca 518
           |||||||| || |  |||||||| |||||||||||| |||| ||||| ||||||||||||
Sbjct: 549 cagaagaactcaagataggccttctggtaaacatagcctccaggaccaccccatccaaca 490

                                                                       
Query: 519 ctaggagactcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccc 578
           || |  || |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 489 cttgttgaatcagatctctctccattaacagcaggttggctgttaatggtaaggaagccc 430

             
Query: 579 tt 580
           ||
Sbjct: 429 tt 428
to top
>dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F11, full
           insert sequence
          Length = 968

 Score =  295 bits (149), Expect = 8e-77
 Identities = 398/482 (82%)
 Strand = Plus / Minus

                                                                       
Query: 99  atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
           ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 763 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 704

                                                                       
Query: 159 aggcaataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaac 218
           | | | ||| ||||||| ||||  ||||| | |||||| |||||||| ||||| ||||||
Sbjct: 703 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 644

                                                                       
Query: 219 aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 278
           ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 643 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 584

                                                                       
Query: 279 gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 338
           || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 583 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 524

                                                                       
Query: 339 gcgttcacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatg 398
           || ||||| ||||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 523 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 464

                                                                       
Query: 399 tatgtgagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcg 458
           ||||| || ||||||||||||||||||||||| || || || ||||||||||| || |  
Sbjct: 463 tatgtaagagaagggaatgccttgctcttctcaattagctgatccagcttctcttttgaa 404

                                                                       
Query: 459 cagaagaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaaca 518
           |||||||| || |  |||||||| |||||||||||| |||| ||||| ||||||||||||
Sbjct: 403 cagaagaactcaagataggccttctggtaaacatagcctccaggaccaccccatccaaca 344

                                                                       
Query: 519 ctaggagactcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccc 578
           || |  || |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||
Sbjct: 343 cttgttgaatcagatctctctccattaacagcaggttggctgttaatggtaaggaagccc 284

             
Query: 579 tt 580
           ||
Sbjct: 283 tt 282
to top
>gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reductase mRNA, complete cds
          Length = 2225

 Score =  293 bits (148), Expect = 3e-76
 Identities = 394/477 (82%)
 Strand = Plus / Minus

                                                                        
Query: 104  cttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgaccaggca 163
            |||||| |||||||| ||||||||   || |||||| ||||| || |||||||||||| |
Sbjct: 1852 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacgaggctgaccaggta 1793

                                                                        
Query: 164  ataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaacaggca 223
             ||||||||||| |||| |||||| | |||||| ||||| |||||||| ||||||| |||
Sbjct: 1792 gtaggtcttctgaaccttctctagtagctccctcgatgaatcaccctcagggaacatgca 1733

                                                                        
Query: 224  ggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctcgccga 283
              |||| ||||  | |||||| ||||| ||||| || ||||||||||| || || ||   
Sbjct: 1732 accccacccccgagtccagatttcaaatgcttcgtccttccaaaccataaaacttgcatg 1673

                                                                        
Query: 284  gtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgacagcgtt 343
             || || || ||||||||||| ||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1672 atccacaaccgtaggctggataatctccttgccagggaaaacaccccacgtgacagcatt 1613

                                                                        
Query: 344  cacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatgtatgt 403
            |||||||||||  |  || || ||||  | ||| || ||||||||||| || ||||| ||
Sbjct: 1612 cacggcgttcggtgaaatattggagaatgtttctccatccttgttcacagcaatgtaagt 1553

                                                                        
Query: 404  gagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcgcagaa 463
            ||| ||||||||||| ||| ||||||| || |||||||||| ||||||||| ||||||||
Sbjct: 1552 gagagaagggaatgctttgatcttctcaattagttggtccaacttctcctttgcgcagaa 1493

                                                                        
Query: 464  gaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaacactagg 523
            |||||| | ||||||||| || ||||| ||| |||| ||||| ||||| |||||| ||||
Sbjct: 1492 gaattcgaggtaggccttctgataaacgtagcctccaggaccaccccaaccaacagtagg 1433

                                                                     
Query: 524  agactcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccctt 580
             || || ||||||||| |||||||||||||||||||||| || || |||||||||||
Sbjct: 1432 cgagtcggatttctctccatttacagcaggttggctgttaattgtaaggaaaccctt 1376
to top
>gb|AY109096.1| Zea mays PCO119715 mRNA sequence
          Length = 2423

 Score =  285 bits (144), Expect = 8e-74
 Identities = 393/477 (82%)
 Strand = Plus / Minus

                                                                        
Query: 104  cttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgaccaggca 163
            |||||| |||||||| ||||||||   || |||||| ||||| || |||||||||||| |
Sbjct: 1835 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacgaggctgaccaggta 1776

                                                                        
Query: 164  ataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaacaggca 223
             ||||||||||| |||| |||||| | |||||| ||||| |||||||| ||||||| |||
Sbjct: 1775 gtaggtcttctgaaccttctctagtagctccctcgatgaatcaccctcagggaacatgca 1716

                                                                        
Query: 224  ggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctcgccga 283
              |||| ||||  | |||||| ||||| ||||| || ||||||||||| || || ||   
Sbjct: 1715 accccacccccgagtccagatttcaaatgcttcgtccttccaaaccataaaacttgcatg 1656

                                                                        
Query: 284  gtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgacagcgtt 343
             || || || ||||||||||| ||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1655 atccacaaccgtaggctggataatctccttgccagggaaaacaccccacgtgacagcatt 1596

                                                                        
Query: 344  cacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatgtatgt 403
            |||||||||||  |  || || ||||  | ||| || ||||||||||| || ||||| ||
Sbjct: 1595 cacggcgttcggtgaaatattggagaatgtttctccatccttgttcacagcaatgtaagt 1536

                                                                        
Query: 404  gagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcgcagaa 463
            ||| ||||||||||| ||| ||||||| || |||||||||| ||||||||| |||| |||
Sbjct: 1535 gagagaagggaatgctttgatcttctcaattagttggtccaacttctcctttgcgccgaa 1476

                                                                        
Query: 464  gaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaacactagg 523
            |||||| | ||||||||| || ||||| ||| |||| ||||| ||||| |||||| ||||
Sbjct: 1475 gaattcgaggtaggccttctgataaacgtagcctccaggaccaccccaaccaacagtagg 1416

                                                                     
Query: 524  agactcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccctt 580
             || || ||||||||| |||||||||||||||||||||| || || |||||||||||
Sbjct: 1415 cgagtcggatttctctccatttacagcaggttggctgttaattgtaaggaaaccctt 1359
to top
>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full
            insert sequence
          Length = 2169

 Score =  281 bits (142), Expect = 1e-72
 Identities = 398/483 (82%), Gaps = 1/483 (0%)
 Strand = Plus / Minus

                                                                        
Query: 99   atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
            ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 1849 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 1790

                                                                        
Query: 159  aggcaataggtcttctgcacctgctctagcaactccctggatgagtcaccctccgggaac 218
            | | | ||| ||||||| ||||  ||||| | |||||| |||||||| ||||| ||||||
Sbjct: 1789 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 1730

                                                                        
Query: 219  aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 278
            ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 1729 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 1670

                                                                        
Query: 279  gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 338
            || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 1669 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 1610

                                                                        
Query: 339  gcgttcacggcgttcgcagggatgtttgagatcgattccccttccttgttcaccgcgatg 398
            || ||||| ||||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 1609 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 1550

                                                                        
Query: 399  tatgtgagggaagggaatgccttgctcttctcgatgagttggtccagcttctccttagcg 458
            ||||| || ||||||||||||||||||||||| || || || ||||||||||| || |  
Sbjct: 1549 tatgtaagagaagggaatgccttgctcttctcaattagctgatccagcttctcttttgaa 1490

                                                                        
Query: 459  cagaagaattcnacgtaggccttttggtaaacatagnctcctggaccgccccatccaaca 518
            |||||||| || |  |||||||| |||||||||||| |||| ||||| ||||||||||||
Sbjct: 1489 cagaagaactcaagataggccttctggtaaacatagcctccaggaccaccccatccaaca 1430

                                                                        
Query: 519  ctaggagactcagatttctct-gcatttacagcaggttggctgttgatggtnaggaaacc 577
            || |  || |||||| |||||  |||| ||||||||||||||||| ||||| ||||| ||
Sbjct: 1429 cttgttgaatcagatctctctcccattaacagcaggttggctgttaatggtaaggaagcc 1370

               
Query: 578  ctt 580
            |||
Sbjct: 1369 ctt 1367
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  202 bits (102), Expect = 9e-49
 Identities = 268/324 (82%)
 Strand = Plus / Plus

                                                                            
Query: 191      ctccctggatgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 250
                |||||| |||||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 33864681 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 33864740

                                                                            
Query: 251      cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 310
                 ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 33864741 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 33864800

                                                                            
Query: 311      cttgccggggaacacgccccaagtgacagcgttcacggcgttcgcagggatgtttgagat 370
                |||||| ||||| || ||||| ||||| || ||||| ||||| |  || |||||||||| 
Sbjct: 33864801 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 33864860

                                                                            
Query: 371      cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 430
                 || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 33864861 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 33864920

                                                                            
Query: 431      gatgagttggtccagcttctccttagcgcagaagaattcnacgtaggccttttggtaaac 490
                 || || || ||||||||||| || |  |||||||| || |  |||||||| ||||||||
Sbjct: 33864921 aattagctgatccagcttctcttttgaacagaagaactcaagataggccttctggtaaac 33864980

                                        
Query: 491      atagnctcctggaccgccccatcc 514
                |||| |||| ||||| ||||||||
Sbjct: 33864981 atagcctccaggaccaccccatcc 33865004



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 528      tcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccctt 580
                |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 33865471 tcagatctctctccattaacagcaggttggctgttaatggtaaggaagccctt 33865523



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 99       atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
                ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 33864258 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 33864317

                                       
Query: 159      aggcaataggtcttctgcacctg 181
                | | | ||| ||||||| |||||
Sbjct: 33864318 aagaagtagctcttctggacctg 33864340
to top
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence,
            complete sequence
          Length = 159795

 Score =  202 bits (102), Expect = 9e-49
 Identities = 268/324 (82%)
 Strand = Plus / Minus

                                                                        
Query: 191  ctccctggatgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 250
            |||||| |||||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 8559 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 8500

                                                                        
Query: 251  cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 310
             ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 8499 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 8440

                                                                        
Query: 311  cttgccggggaacacgccccaagtgacagcgttcacggcgttcgcagggatgtttgagat 370
            |||||| ||||| || ||||| ||||| || ||||| ||||| |  || |||||||||| 
Sbjct: 8439 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 8380

                                                                        
Query: 371  cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 430
             || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 8379 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 8320

                                                                        
Query: 431  gatgagttggtccagcttctccttagcgcagaagaattcnacgtaggccttttggtaaac 490
             || || || ||||||||||| || |  |||||||| || |  |||||||| ||||||||
Sbjct: 8319 aattagctgatccagcttctcttttgaacagaagaactcaagataggccttctggtaaac 8260

                                    
Query: 491  atagnctcctggaccgccccatcc 514
            |||| |||| ||||| ||||||||
Sbjct: 8259 atagcctccaggaccaccccatcc 8236



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 528  tcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccctt 580
            |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 7769 tcagatctctctccattaacagcaggttggctgttaatggtaaggaagccctt 7717



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                        
Query: 99   atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
            ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 8982 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 8923

                                   
Query: 159  aggcaataggtcttctgcacctg 181
            | | | ||| ||||||| |||||
Sbjct: 8922 aagaagtagctcttctggacctg 8900
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  202 bits (102), Expect = 9e-49
 Identities = 268/324 (82%)
 Strand = Plus / Plus

                                                                            
Query: 191      ctccctggatgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 250
                |||||| |||||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 33955153 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 33955212

                                                                            
Query: 251      cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 310
                 ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 33955213 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 33955272

                                                                            
Query: 311      cttgccggggaacacgccccaagtgacagcgttcacggcgttcgcagggatgtttgagat 370
                |||||| ||||| || ||||| ||||| || ||||| ||||| |  || |||||||||| 
Sbjct: 33955273 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 33955332

                                                                            
Query: 371      cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 430
                 || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 33955333 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 33955392

                                                                            
Query: 431      gatgagttggtccagcttctccttagcgcagaagaattcnacgtaggccttttggtaaac 490
                 || || || ||||||||||| || |  |||||||| || |  |||||||| ||||||||
Sbjct: 33955393 aattagctgatccagcttctcttttgaacagaagaactcaagataggccttctggtaaac 33955452

                                        
Query: 491      atagnctcctggaccgccccatcc 514
                |||| |||| ||||| ||||||||
Sbjct: 33955453 atagcctccaggaccaccccatcc 33955476



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 528      tcagatttctctgcatttacagcaggttggctgttgatggtnaggaaaccctt 580
                |||||| ||||| |||| ||||||||||||||||| ||||| ||||| |||||
Sbjct: 33955943 tcagatctctctccattaacagcaggttggctgttaatggtaaggaagccctt 33955995



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 99       atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgacc 158
                ||||||||||| || || ||||| || ||| |||||||||| ||||||||||| || |||
Sbjct: 33954730 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 33954789

                                       
Query: 159      aggcaataggtcttctgcacctg 181
                | | | ||| ||||||| |||||
Sbjct: 33954790 aagaagtagctcttctggacctg 33954812
to top
>gb|BT019001.1| Zea mays clone Contig489.F mRNA sequence
          Length = 509

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaaggctgaccaggca 163
           |||||| |||||||| ||||||||   || |||||| ||||| ||||||||||||||| |
Sbjct: 407 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacaaggctgaccaggta 466

                                 
Query: 164 ataggtcttctgcacctgctct 185
            ||||||||||| |||| ||||
Sbjct: 467 gtaggtcttctgaaccttctct 488
to top
>ref|XM_362588.1| Magnaporthe grisea 70-15 hypothetical protein (MG08171.4) partial
            mRNA
          Length = 2073

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 305  gatctccttgccggggaacacgccccaagtgacagcgttc 344
            |||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1866 gatctccttgccagggaaaacgccccaagtgacggcgttc 1827
to top
>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
              sequence
          Length = 906719

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 309    tccttgccggggaacacgccccaagtgacagcgtt 343
              |||||||||||||| || |||||||||||||||||
Sbjct: 349895 tccttgccggggaagacaccccaagtgacagcgtt 349929
to top
>ref|XM_568023.1| Cryptococcus neoformans var. neoformans JEC21
            methylenetetrahydrofolate reductase (NADPH) (CNL04820)
            partial mRNA
          Length = 2382

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 309  tccttgccggggaacacgccccaagtgacagcgtt 343
            |||||||||||||| || |||||||||||||||||
Sbjct: 1777 tccttgccggggaagacaccccaagtgacagcgtt 1743
to top
>dbj|AK058876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G01, full
           insert sequence
          Length = 304

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 99  atctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacaag 151
           ||||||||||| || || ||||| || ||| |||||||||| |||||||||||
Sbjct: 95  atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaag 43
to top
>ref|XM_953671.1| Neurospora crassa OR74A hypothetical protein (NCU09545.1) partial
            mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 309  tccttgccggggaacacgcccca 331
            |||||||||||||||||||||||
Sbjct: 1835 tccttgccggggaacacgcccca 1813
to top
>ref|XM_329903.1| Neurospora crassa OR74A hypothetical protein (NCU09545.1) partial
            mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 309  tccttgccggggaacacgcccca 331
            |||||||||||||||||||||||
Sbjct: 1835 tccttgccggggaacacgcccca 1813
to top
>emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig B11E5
          Length = 191196

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 309    tccttgccggggaacacgcccca 331
              |||||||||||||||||||||||
Sbjct: 122798 tccttgccggggaacacgcccca 122776
to top
>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete sequence
          Length = 153366

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 131    gatgtagtcattgtccacaagg 152
              ||||||||||||||||||||||
Sbjct: 100255 gatgtagtcattgtccacaagg 100234
to top
>ref|XM_535405.2| PREDICTED: Canis familiaris similar to Methylenetetrahydrofolate
            reductase (LOC478230), mRNA
          Length = 2343

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 252  gcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctcc 311
            |||||||| ||||| | |||||||||  | | ||| || || ||||||||||||||||||
Sbjct: 2135 gcttcatccttccagaacatgaagctgacagggtctaccaccgtaggctggatgatctcc 2076

                                      
Query: 312  ttgccggggaacacgccccaagtgac 337
               || ||||| | ||||||||||||
Sbjct: 2075 cgccccgggaagatgccccaagtgac 2050
to top
>gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome 7, complete sequence
          Length = 228885

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 131    gatgtagtcattgtccacaagg 152
              ||||||||||||||||||||||
Sbjct: 205668 gatgtagtcattgtccacaagg 205647
to top
>ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.2
            mRNA, complete cds
          Length = 1708

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1412 gaccaaatctcaaacgcttcgtctttcca 1384
to top
>ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.3
            mRNA, complete cds
          Length = 2021

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1725 gaccaaatctcaaacgcttcgtctttcca 1697
to top
>ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.1
            mRNA, complete cds
          Length = 2116

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1820 gaccaaatctcaaacgcttcgtctttcca 1792
to top
>ref|XM_594291.2| PREDICTED: Bos taurus hypothetical LOC516149 (LOC516149), mRNA
          Length = 855

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 gccttgctcttctcgatgagt 437
           |||||||||||||||||||||
Sbjct: 338 gccttgctcttctcgatgagt 318
to top
>gb|BC110162.1| Bos taurus hypothetical LOC516149, mRNA (cDNA clone MGC:134373
           IMAGE:8063959), complete cds
          Length = 907

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 417 gccttgctcttctcgatgagt 437
           |||||||||||||||||||||
Sbjct: 427 gccttgctcttctcgatgagt 407
to top
>gb|BC084479.1| Xenopus tropicalis hypothetical LOC496500, mRNA (cDNA clone
           MGC:89385 IMAGE:6989070), complete cds
          Length = 1891

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 438 tggtccagcttctccttagcg 458
           |||||||||||||||||||||
Sbjct: 461 tggtccagcttctccttagcg 441
to top
>gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
            MTHFR1 (At3g59970) mRNA, complete cds
          Length = 1810

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1643 gaccaaatctcaaacgcttcgtctttcca 1615
to top
>gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
            MTHFR1 (At3g59970) mRNA, complete cds
          Length = 2002

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1725 gaccaaatctcaaacgcttcgtctttcca 1697
to top
>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 237   gaccagatctcaaacgcttcatctttcca 265
             ||||| |||||||||||||| ||||||||
Sbjct: 86925 gaccaaatctcaaacgcttcgtctttcca 86897
to top
>gb|AF441241.2| Synthetic construct chimera1 mRNA, complete cds
          Length = 1785

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1649 gaccaaatctcaaacgcttcgtctttcca 1621
to top
>emb|BX825865.1|CNS0A52W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 485

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 237 gaccagatctcaaacgcttcatctttcca 265
           ||||| |||||||||||||| ||||||||
Sbjct: 191 gaccaaatctcaaacgcttcgtctttcca 163
to top
>gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR1 mRNA,
            complete cds
          Length = 1994

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 237  gaccagatctcaaacgcttcatctttcca 265
            ||||| |||||||||||||| ||||||||
Sbjct: 1705 gaccaaatctcaaacgcttcgtctttcca 1677
to top
>ref|NM_129979.2| Arabidopsis thaliana MTHFR2; methylenetetrahydrofolate reductase
            (NADPH) AT2G44160 (MTHFR2) mRNA, complete cds
          Length = 2037

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 447  ttctccttagcgcagaagaattcnacgtaggccttttggtaaacatagnctcctggaccg 506
            |||||||| | ||||||||| || |  || ||||||||||| |||||  |  | ||||| 
Sbjct: 1524 ttctcctttgagcagaagaactctagataagccttttggtatacatatccaacaggacct 1465

                                                                        
Query: 507  ccccatccaacactaggagactcagatttctctgcatttacagcaggttggctgttgatg 566
            |||||||||||| | || || |||||| |||| || || || |  |||||||| ||||||
Sbjct: 1464 ccccatccaacagttggggaatcagatctctcggcgttgactgatggttggctattgatg 1405

              
Query: 567  gt 568
            ||
Sbjct: 1404 gt 1403
to top
>gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete sequence
          Length = 58071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   atgtatgtgagggaagggaa 415
             ||||||||||||||||||||
Sbjct: 56135 atgtatgtgagggaagggaa 56116
to top
>emb|AJ245414.1|ATH245414 Arabidopsis thaliana mRNA for methylenetetrahydrofolate reductase
          Length = 2037

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 447  ttctccttagcgcagaagaattcnacgtaggccttttggtaaacatagnctcctggaccg 506
            |||||||| | ||||||||| || |  || ||||||||||| |||||  |  | ||||| 
Sbjct: 1500 ttctcctttgagcagaagaactctagataagccttttggtatacatatccaacaggacct 1441

                                                                        
Query: 507  ccccatccaacactaggagactcagatttctctgcatttacagcaggttggctgttgatg 566
            |||||||||||| | || || |||||| |||| || || || |  |||||||| ||||||
Sbjct: 1440 ccccatccaacagttggggaatcagatctctcggcgttgactgatggttggctattgatg 1381

              
Query: 567  gt 568
            ||
Sbjct: 1380 gt 1379
to top
>gb|AC004413.2| Homo sapiens PAC clone RP4-650P9 from 7, complete sequence
          Length = 114827

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 525   gactcagatttctctgcatttaca 548
             |||| |||||||||||||||||||
Sbjct: 24976 gactgagatttctctgcatttaca 24999
to top
>ref|XM_500349.1| Yarrowia lipolytica CLIB122, YALI0B00572g predicted mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  ggctggatgatctccttgccgggg 320
            |||||||||| |||||||||||||
Sbjct: 1550 ggctggatgacctccttgccgggg 1527
to top
>emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on chromosome 9 Contains the
             3' end of the PAX5 gene for paired box gene 5 (B-cell
             lineage specific activator protein) (BSAP), complete
             sequence
          Length = 125110

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 214   ggaacaggcaggcccatcccctgg 237
             |||| |||||||||||||||||||
Sbjct: 51971 ggaagaggcaggcccatcccctgg 51948
to top
>emb|AL138807.12| Human DNA sequence from clone RP5-827A12 on chromosome 20 Contains
            part of the ATP9A (KIAA0611) gene for ATPase class II
            type 9A and a ribosomal protein L29 (RPL29) pseudogene,
            complete sequence
          Length = 67895

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 527  ctcagatttctctgcatttacagc 550
            ||||||||||||||||||| ||||
Sbjct: 6934 ctcagatttctctgcatttgcagc 6957
to top
>gb|AC152396.4| Mus musculus chromosome 18, clone RP23-175I15, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 542   atttacagcaggttggctgt 561
             ||||||||||||||||||||
Sbjct: 30662 atttacagcaggttggctgt 30643
to top
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 413     gaatgccttgctcttctcga 432
               ||||||||||||||||||||
Sbjct: 2736127 gaatgccttgctcttctcga 2736146
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 222     caggcccatcccctggaccagatc 245
               ||||||||||||| ||||||||||
Sbjct: 2852036 caggcccatcccccggaccagatc 2852059
to top
>gb|AY050434.1| Arabidopsis thaliana At2g44160/F6E13.29 mRNA, complete cds
          Length = 1917

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 447  ttctccttagcgcagaagaattcnacgtaggccttttggtaaacatagnctcctggaccg 506
            |||||||| | ||||||||| || |  || ||||||||||| |||||  |  | ||||| 
Sbjct: 1473 ttctcctttgagcagaagaactctagataagccttttggtatacatatccaacaggacct 1414

                                                                        
Query: 507  ccccatccaacactaggagactcagatttctctgcatttacagcaggttggctgttgatg 566
            |||||||||||| | || || |||||| |||| || || || |  |||||||| ||||||
Sbjct: 1413 ccccatccaacagttggggaatcagatctctcggcgttgactgatggttggctattgatg 1354

              
Query: 567  gt 568
            ||
Sbjct: 1353 gt 1352
to top
>gb|AF370515.1|AF370515 Arabidopsis thaliana putative methylenetetrahydrofolate reductase
            (At2g44160; F6E13.29) mRNA, complete cds
          Length = 2034

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 447  ttctccttagcgcagaagaattcnacgtaggccttttggtaaacatagnctcctggaccg 506
            |||||||| | ||||||||| || |  || ||||||||||| |||||  |  | ||||| 
Sbjct: 1523 ttctcctttgagcagaagaactctagataagccttttggtatacatatccaacaggacct 1464

                                                                        
Query: 507  ccccatccaacactaggagactcagatttctctgcatttacagcaggttggctgttgatg 566
            |||||||||||| | || || |||||| |||| || || || |  |||||||| ||||||
Sbjct: 1463 ccccatccaacagttggggaatcagatctctcggcgttgactgatggttggctattgatg 1404

              
Query: 567  gt 568
            ||
Sbjct: 1403 gt 1402
to top
>gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195332

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 170    cttctgcacctgctctagca 189
              ||||||||||||||||||||
Sbjct: 169133 cttctgcacctgctctagca 169114
to top
>gb|AF181967.1|AF181967 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR2 mRNA,
            complete cds
          Length = 1897

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 96/122 (78%)
 Strand = Plus / Minus

                                                                        
Query: 447  ttctccttagcgcagaagaattcnacgtaggccttttggtaaacatagnctcctggaccg 506
            |||||||| | ||||||||| || |  || ||||||||||| |||||  |  | ||||| 
Sbjct: 1433 ttctcctttgagcagaagaactctagataagccttttggtatacatatccaacaggacct 1374

                                                                        
Query: 507  ccccatccaacactaggagactcagatttctctgcatttacagcaggttggctgttgatg 566
            |||||||||||| | || || |||||| |||| || || || |  |||||||| ||||||
Sbjct: 1373 ccccatccaacagttggggaatcagatctctcggcgttgactgatggttggctattgatg 1314

              
Query: 567  gt 568
            ||
Sbjct: 1313 gt 1312
to top
>gb|AC115003.18| Mus musculus chromosome 6, clone RP24-179P9, complete sequence
          Length = 168290

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    cttctgcacctgctctagca 189
              ||||||||||||||||||||
Sbjct: 159242 cttctgcacctgctctagca 159261
to top
>gb|AC102173.15| Mus musculus chromosome 18, clone RP23-472D7, complete sequence
          Length = 185768

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 542    atttacagcaggttggctgt 561
              ||||||||||||||||||||
Sbjct: 164959 atttacagcaggttggctgt 164940
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia
             lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 297   ggctggatgatctccttgccgggg 320
             |||||||||| |||||||||||||
Sbjct: 52211 ggctggatgacctccttgccgggg 52234


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,062,877
Number of Sequences: 3902068
Number of extensions: 4062877
Number of successful extensions: 76816
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 76647
Number of HSP's gapped (non-prelim): 167
length of query: 594
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 571
effective length of database: 17,143,297,704
effective search space: 9788822988984
effective search space used: 9788822988984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top