ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20i19 |
|---|---|
| Clone Library Name | barley_pub |
>MTHR_ORYSA (Q75HE6) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 594 Score = 357 bits (917), Expect = 1e-98 Identities = 170/191 (89%), Positives = 183/191 (95%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 GKL SSPWSELDGLQPET IIDDQLVK+N KGFLTINSQPAVN E+S+S SVGWGGPGGY Sbjct: 404 GKLTSSPWSELDGLQPETKIIDDQLVKINQKGFLTINSQPAVNGERSDSTSVGWGGPGGY 463 Query: 498 VYQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 VYQKAY+EFFC+KEKLDQLIEKSKAFPSLTYIAVNK+GES SNIP NAVNAVTWGVFPGK Sbjct: 464 VYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGK 523 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYI 139 EI+QPTVVDSASFMVWKDEAFEIWS+GWACLFPEGDSSRE+L++VQK+Y LVSLVDNDYI Sbjct: 524 EIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILDKVQKSYFLVSLVDNDYI 583 Query: 138 SGDLFAAFKEI 106 +GDLFAAFKEI Sbjct: 584 NGDLFAAFKEI 594
>MTHR1_MAIZE (Q9SE94) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| (ZmMTHFR1) Length = 593 Score = 348 bits (893), Expect = 9e-96 Identities = 166/189 (87%), Positives = 176/189 (93%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 GKL SSPWSELDGLQPET IIDDQLV +N KGFLTINSQPAVN EKS+SP+VGWGGPGGY Sbjct: 404 GKLTSSPWSELDGLQPETKIIDDQLVNINQKGFLTINSQPAVNGEKSDSPTVGWGGPGGY 463 Query: 498 VYQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 VYQKAY+EFFCAKEKLDQLIEK KAFPSLTYIAVNK+GE+ SNI NAVNAVTWGVFPGK Sbjct: 464 VYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGK 523 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYI 139 EIIQPTVVD ASFMVWKDEAFEIW+RGW C+FPEGDSSRELLE+VQKTY LVSLVDNDY+ Sbjct: 524 EIIQPTVVDHASFMVWKDEAFEIWTRGWGCMFPEGDSSRELLEKVQKTYYLVSLVDNDYV 583 Query: 138 SGDLFAAFK 112 GDLFAAFK Sbjct: 584 QGDLFAAFK 592
>MTHR1_ARATH (Q9SE60) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| (AtMTHFR1) Length = 592 Score = 297 bits (760), Expect = 2e-80 Identities = 138/188 (73%), Positives = 164/188 (87%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 G LKSSPWSELDGLQPET II++QL K+NS GFLTINSQP+VNA KS+SP++GWGGPGGY Sbjct: 404 GNLKSSPWSELDGLQPETKIINEQLGKINSNGFLTINSQPSVNAAKSDSPAIGWGGPGGY 463 Query: 498 VYQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 VYQKAY+EFFC+K+KLD L+EKSKAFPS+TY+AVNK +SN + VNAVTWGVFP K Sbjct: 464 VYQKAYLEFFCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAK 523 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYI 139 E+IQPT+VD ASF VWKDEAFEIWSR WA L+PE D SR+LLE+V+ +Y LVSLVDN+YI Sbjct: 524 EVIQPTIVDPASFKVWKDEAFEIWSRSWANLYPEDDPSRKLLEEVKNSYYLVSLVDNNYI 583 Query: 138 SGDLFAAF 115 +GD+F+ F Sbjct: 584 NGDIFSVF 591
>MTHR2_ARATH (O80585) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| (AtMTHFR2) Length = 594 Score = 295 bits (755), Expect = 9e-80 Identities = 138/191 (72%), Positives = 164/191 (85%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 G LKSSPWSELDGLQPET II++QL+K+NSKGFLTINSQP+VNAE+S+SP+VGWGGP GY Sbjct: 404 GNLKSSPWSELDGLQPETRIINEQLIKVNSKGFLTINSQPSVNAERSDSPTVGWGGPVGY 463 Query: 498 VYQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 VYQKAY+EFFC+KEKLD ++EK KA PS+TY+AVNK + +SN VNAVTWGVFP K Sbjct: 464 VYQKAYLEFFCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAK 523 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYI 139 EIIQPT+VD ASF VWKDEAFE WSR WA L+PE D SR LLE+V+ +Y LVSLV+NDYI Sbjct: 524 EIIQPTIVDPASFNVWKDEAFETWSRSWANLYPEADPSRNLLEEVKNSYYLVSLVENDYI 583 Query: 138 SGDLFAAFKEI 106 +GD+FA F ++ Sbjct: 584 NGDIFAVFADL 594
>MTHR_HUMAN (P42898) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 656 Score = 183 bits (465), Expect = 4e-46 Identities = 86/179 (48%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Frame = -3 Query: 675 KLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGYV 496 K+ PW++ + L ET+++ ++L+++N +G LTINSQP +N + S P VGWG GGYV Sbjct: 449 KVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYV 507 Query: 495 YQKAYVEFFCAKEKLDQLIEKSKAFP-SLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 +QKAY+EFF ++E + L++ K + + Y VN +GE+I+N P NAVTWG+FPG+ Sbjct: 508 FQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGR 567 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDY 142 EIIQPTVVD SFM WKDEAF +W W L+ E SR +++ + Y LV+LVDND+ Sbjct: 568 EIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
>MTHR_MACFA (Q60HE5) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 656 Score = 183 bits (464), Expect = 5e-46 Identities = 86/179 (48%), Positives = 123/179 (68%), Gaps = 1/179 (0%) Frame = -3 Query: 675 KLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGYV 496 K+ PW++ + L ET+++ ++L+++N +G LTINSQP +N + S P VGWG GGYV Sbjct: 449 KVTCLPWND-EPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPVVGWGPSGGYV 507 Query: 495 YQKAYVEFFCAKEKLDQLIEKSKAFP-SLTYIAVNKEGESISNIPANAVNAVTWGVFPGK 319 +QKAY+EFF ++E + L++ K + + Y VN +GE+I+N P NAVTWG+FPG+ Sbjct: 508 FQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGR 567 Query: 318 EIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDY 142 EIIQPTVVD SFM WKDEAF +W W L+ E SR +++ + Y LV+LVDND+ Sbjct: 568 EIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
>MTHR_MOUSE (Q9WU20) Methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 654 Score = 179 bits (455), Expect = 5e-45 Identities = 84/174 (48%), Positives = 122/174 (70%), Gaps = 1/174 (0%) Frame = -3 Query: 660 PWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGYVYQKAY 481 PW++ + L ET+++ ++L+++N G LTINSQP +NA+ S P VGWG GGYV+QKAY Sbjct: 453 PWND-EPLAAETSLMKEELLRVNRLGILTINSQPNINAKPSSDPVVGWGPSGGYVFQKAY 511 Query: 480 VEFFCAKEKLDQLIEKSKAFP-SLTYIAVNKEGESISNIPANAVNAVTWGVFPGKEIIQP 304 +EFF ++E ++ L++ K + + Y V+ +GE+I+N P NAVTWG+FPG+EIIQP Sbjct: 512 LEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQP 571 Query: 303 TVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDY 142 TVVD SFM WKDEAF +W W L+ E SR +++ + Y LV+LVDN++ Sbjct: 572 TVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEF 625
>MTHR1_SCHPO (Q10258) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| Length = 603 Score = 174 bits (442), Expect = 2e-43 Identities = 91/191 (47%), Positives = 119/191 (62%), Gaps = 1/191 (0%) Frame = -3 Query: 675 KLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGYV 496 K+ S PWS+L + E +I DQL+ MN FLTINSQPA+N EKS P GWG P GYV Sbjct: 399 KISSLPWSDLP-ISDEADLIRDQLLSMNRNAFLTINSQPALNGEKSSHPVFGWGPPNGYV 457 Query: 495 YQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGKE 316 +QK YVEFF L++L E K S++Y NK G+ +N NAVTWGVFP +E Sbjct: 458 FQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNRE 517 Query: 315 IIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYIS 136 IIQPT+V+S SF+ WKDEA+ + WA + SR+LL + K + L +VDND+ + Sbjct: 518 IIQPTIVESTSFLAWKDEAYSL-GMEWANAYSPDSISRKLLVSMMKEWFLCVIVDNDFQN 576 Query: 135 G-DLFAAFKEI 106 G LF F ++ Sbjct: 577 GQSLFDVFNKM 587
>MTHR_CAEEL (Q17693) Probable methylenetetrahydrofolate reductase (EC 1.5.1.20)| Length = 663 Score = 166 bits (421), Expect = 5e-41 Identities = 86/182 (47%), Positives = 115/182 (63%), Gaps = 4/182 (2%) Frame = -3 Query: 675 KLKSSPWSELD-GLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 K+ PW+E + G+QPET++I +QLV N G LT+NSQP+VN S P VGWG PGGY Sbjct: 463 KVTVLPWTEAETGVQPETSLISEQLVWCNENGILTVNSQPSVNGAPSTDPLVGWGKPGGY 522 Query: 498 VYQKAYVEFFCAKEKLDQLIE-KSKAFP-SLTYIAVNKEGE-SISNIPANAVNAVTWGVF 328 YQKAY+E F E D+LI+ + FP + Y A+NK+ +N AVTWGVF Sbjct: 523 CYQKAYLECFMTAELSDKLIQIIEREFPVRVNYHAINKDSTFDKTNSEETTPIAVTWGVF 582 Query: 327 PGKEIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDN 148 PG EI QPTVVD SF W+DEA+++W W +P+ S +++ V + LV+LVDN Sbjct: 583 PGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIKAVHDEFRLVTLVDN 642 Query: 147 DY 142 D+ Sbjct: 643 DF 644
>MTHR2_YEAST (P53128) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| Length = 599 Score = 157 bits (398), Expect = 2e-38 Identities = 82/186 (44%), Positives = 115/186 (61%), Gaps = 3/186 (1%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 G LK PWS++ + E I L+++N +TINSQP VN +S GWG GY Sbjct: 406 GNLKCLPWSDIP-INDEINPIKAHLIELNQHSIITINSQPQVNGIRSNDKIHGWGPKDGY 464 Query: 498 VYQKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANA-VNAVTWGVFPG 322 VYQK Y+EF K KL +LI+ K LTY A++ +G+ +SN P N+ NAVTWG+FPG Sbjct: 465 VYQKQYLEFMLPKTKLPKLIDTLKNNEFLTYFAIDSQGDLLSNHPDNSKSNAVTWGIFPG 524 Query: 321 KEIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDS--SRELLEQVQKTYCLVSLVDN 148 +EI+QPT+V+ SF+ WK+E + I + W + D S + ++ + YCLV++VDN Sbjct: 525 REILQPTIVEKISFLAWKEEFYHILNE-WKLNMNKYDKPHSAQFIQSLIDDYCLVNIVDN 583 Query: 147 DYISGD 130 DYIS D Sbjct: 584 DYISPD 589
>MTHR1_YEAST (P46151) Methylenetetrahydrofolate reductase 1 (EC 1.5.1.20)| Length = 657 Score = 143 bits (361), Expect = 4e-34 Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 3/186 (1%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGY 499 G + PWS+L GL ET +I ++L+++N +G+LT+ SQPA NA S GWG G Sbjct: 464 GSTDAIPWSDL-GLSAETALIQEELIQLNYRGYLTLASQPATNATLSSDKIFGWGPAKGR 522 Query: 498 VYQKAYVEFFCAKEKLDQLIEKS---KAFPSLTYIAVNKEGESISNIPANAVNAVTWGVF 328 +YQKA+VE F +++ + ++ +Y A + G +N+ ++ + VTWGVF Sbjct: 523 LYQKAFVEMFIHRQQWETTLKPKLDHYGRRKFSYYAGDSSGSFETNLDPHSSSVVTWGVF 582 Query: 327 PGKEIIQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDN 148 P + Q T+++ SF W+DEAF IWS WA LFP + LL V K YCLVS+V + Sbjct: 583 PNSPVKQTTIIEEESFKAWRDEAFSIWSE-WAKLFPRNTPANILLRLVHKDYCLVSIVHH 641 Query: 147 DYISGD 130 D+ D Sbjct: 642 DFKETD 647
>MTHR2_SCHPO (O74927) Methylenetetrahydrofolate reductase 2 (EC 1.5.1.20)| Length = 641 Score = 140 bits (352), Expect = 5e-33 Identities = 70/178 (39%), Positives = 105/178 (58%) Frame = -3 Query: 672 LKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGWGGPGGYVY 493 + + PW + + ++ ET I L+K+N + T+ SQPAVN S P GWG GG V+ Sbjct: 453 ISAIPWID-EPVEVETKTIAKYLLKLNGNSWWTVGSQPAVNGAPSADPVFGWGPKGGRVF 511 Query: 492 QKAYVEFFCAKEKLDQLIEKSKAFPSLTYIAVNKEGESISNIPANAVNAVTWGVFPGKEI 313 QKA+VE F + L I K P +TY A N + E ++N P + +AVTWGV+PG+EI Sbjct: 512 QKAFVECFVNGKDLKDFITKWHDNPQVTYYAGNNKSEFLTNAPKDGASAVTWGVYPGREI 571 Query: 312 IQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYI 139 IQ T++ SF W E+F++W WA L+ + SR+LLE LV+++ +D++ Sbjct: 572 IQSTIIAEVSFKAWLSESFQVWGE-WANLYSKNTPSRKLLENCINDRWLVTVIHHDFM 628
>CDD_SHISS (Q3Z062) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_SHIFL (P0ABF7) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_SHIDS (Q32EM3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_SHIBS (Q322V3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_ECOLI (P0ABF6) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_ECOL6 (Q8FFV3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>CDD_ECO57 (Q8X648) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 32.3 bits (72), Expect = 1.4 Identities = 16/54 (29%), Positives = 29/54 (53%) Frame = -3 Query: 678 GKLKSSPWSELDGLQPETTIIDDQLVKMNSKGFLTINSQPAVNAEKSESPSVGW 517 G++ S ++E P + L+ +N KG+ + Q AV AEK+++P + W Sbjct: 220 GRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQW 273
>PROS_RABIT (P98118) Vitamin K-dependent protein S precursor (Fragment)| Length = 646 Score = 32.3 bits (72), Expect = 1.4 Identities = 14/43 (32%), Positives = 22/43 (51%) Frame = -3 Query: 243 RGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYISGDLFAAF 115 RGW + +E+++Q QK +CLV++ Y G A F Sbjct: 422 RGWNLMKQGASGVKEIIQQKQKKHCLVTVEKGSYYPGSGIAQF 464
>YB1C_SCHPO (P87177) Hypothetical WD-repeat protein C3D6.12 in chromosome II| Length = 922 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/62 (33%), Positives = 31/62 (50%) Frame = -3 Query: 312 IQPTVVDSASFMVWKDEAFEIWSRGWACLFPEGDSSRELLEQVQKTYCLVSLVDNDYISG 133 + PT V S S D + +W +G +F E + REL EQ + T LVS +N G Sbjct: 668 VGPTFVVSGSH----DHSIRLWEQGDDLVFLEEERERELEEQYEST--LVSSYENAEADG 721 Query: 132 DL 127 ++ Sbjct: 722 EV 723
>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)| Length = 1206 Score = 30.4 bits (67), Expect = 5.2 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 9/63 (14%) Frame = -3 Query: 387 GESISNIPANA----VNAVTWGVFPG----KEIIQPTVVDSASFMVWKDEAFEIWSRG-W 235 G++I N+ N +N V+ V PG K+ I+ T S F V K E+ E + RG W Sbjct: 466 GQTIQNVQVNVSDNIINVVSGAVTPGGTKKKDDIKETQHRSERFKVVKIESTEPFKRGRW 525 Query: 234 ACL 226 C+ Sbjct: 526 MCM 528
>DXR_LEIXX (Q6AEY1) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 361 Score = 30.0 bits (66), Expect = 6.8 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +3 Query: 189 ALATPWMSHPPGTGRPIPWTRSQT 260 +L W PGTG P+ WTR+ T Sbjct: 247 SLGLGWPDRVPGTGLPLDWTRAHT 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 99,450,894 Number of Sequences: 219361 Number of extensions: 2178106 Number of successful extensions: 5700 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5449 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5684 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6712189044 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
