ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd20i16 |
|---|---|
| Clone Library Name | barley_pub |
>CENG3_MOUSE (Q8VHH5) Centaurin-gamma 3 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 3) (AGAP-3) (MR1-interacting protein) (MRIP-1) (CRAM-associated GTPase) (CRAG) Length = 910 Score = 38.1 bits (87), Expect = 0.021 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 1/103 (0%) Frame = -2 Query: 559 KSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKN 380 +S + + S + LP+ MQ S A++ + SPKL P ++ RK+H GK Sbjct: 531 RSCSVSSTDQWSEAAALPASMQHPASGPAESLSSSPKLEPPPSPHSNRKKH-----RGKK 585 Query: 379 ET-SPRMQRSSSQAQQNVKSSVAVPHNPSDKRWNI*WMAAHRR 254 T +PR SS A++ +S V + + + W+ A R Sbjct: 586 STGTPRPDGPSSAAEEAEESFEFVVVSLTGQTWHFEASTAEER 628
>VLPE_MYCHR (Q49537) Variant surface antigen E precursor (VLPE prolipoprotein)| Length = 243 Score = 37.0 bits (84), Expect = 0.048 Identities = 29/109 (26%), Positives = 45/109 (41%) Frame = -2 Query: 622 STDNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLS 443 +TDNLS+ + SG +EN S +T + SA ++ S + Sbjct: 33 TTDNLSQSQQPGSGTGSGSGTNTENGSNNGSGSGTTNSSGGTNQSGSASGNGSSNSSVST 92 Query: 442 PDVQDNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVKSSVAVPHNPS 296 PD Q +NP S P T+ E++P +S + N P NP+ Sbjct: 93 PDGQHSNP----SNPTTSDPKESNPSNPTTSDPKESN-------PSNPT 130
>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)| Length = 2829 Score = 36.6 bits (83), Expect = 0.062 Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 6/92 (6%) Frame = -2 Query: 565 VAKSENADQEPRMSNSTP-----LPSYMQFTESARAKA-AALSPKLSPDVQDNNPRKRHS 404 ++ S AD PR TP LP T S +A + P L+P + + R+RH Sbjct: 2462 LSSSSRADSPPRSQTQTPALSPSLPDMALSTHSIQAGGWRKMPPNLNPAAEHGDSRRRHD 2521 Query: 403 LPITNGKNETSPRMQRSSSQAQQNVKSSVAVP 308 + ++ ++ + + RS + +++ K S ++P Sbjct: 2522 ISRSHSESPSRLPITRSGTWKREHSKHSSSLP 2553
>CENG3_HUMAN (Q96P47) Centaurin-gamma 3 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 3) (AGAP-3) (MR1-interacting protein) (MRIP-1) (CRAM-associated GTPase) (CRAG) Length = 875 Score = 33.9 bits (76), Expect = 0.40 Identities = 25/89 (28%), Positives = 40/89 (44%) Frame = -2 Query: 520 STPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQRSSSQA 341 +T LP MQ S A+ + SPKL P ++ RK+H K+ +PR SS Sbjct: 509 TTSLPPGMQHPASGPAEVLSSSPKLDPPPSPHSNRKKH----RRKKSTGTPRPDGPSSAT 564 Query: 340 QQNVKSSVAVPHNPSDKRWNI*WMAAHRR 254 ++ +S V + + + W+ A R Sbjct: 565 EEAEESFEFVVVSLTGQTWHFEASTAEER 593
>PCIF1_HUMAN (Q9H4Z3) Phosphorylated CTD-interacting factor 1| Length = 704 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%) Frame = -2 Query: 538 EPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRH-SLPITNGKNETSPRM 362 +P N+TPLP E+ A +N PRKR S +G P++ Sbjct: 85 DPLGLNATPLPQDSSLVETPPA--------------ENKPRKRQLSEEQPSGNGVKKPKI 130 Query: 361 QRSSSQAQQNVKSSVAVPHNPSDKRW 284 + + Q+V SS ++P P+ K W Sbjct: 131 EIPVTPTGQSVPSSPSIPGTPTLKMW 156
>PCIF1_MOUSE (P59114) Phosphorylated CTD-interacting factor 1| Length = 706 Score = 32.0 bits (71), Expect = 1.5 Identities = 20/85 (23%), Positives = 38/85 (44%) Frame = -2 Query: 538 EPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQ 359 +P N+TPLP E +P V++ + +++ S +G P+++ Sbjct: 85 DPLGLNATPLPQDSSLVE-------------TPPVENKSRKRQLSEEQPSGNGVKKPKIE 131 Query: 358 RSSSQAQQNVKSSVAVPHNPSDKRW 284 + Q+V SS ++P P+ K W Sbjct: 132 IPVTPTSQSVPSSPSIPGTPTLKIW 156
>SYF2_MAGGR (Q521C0) Pre-mRNA-splicing factor SYF2| Length = 340 Score = 31.6 bits (70), Expect = 2.0 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 7/109 (6%) Frame = -2 Query: 541 QEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRM 362 ++ +MS+STP + + + +A +A S K SP+ + + P K + RM Sbjct: 46 RDTKMSDSTPTEAAVAESNTAGNEATTNSDKASPETTTTSTTE----PGNTAKTAAAERM 101 Query: 361 -------QRSSSQAQQNVKSSVAVPHNPSDKRWNI*WMAAHRRGAIKSN 236 R+ + + QN+K++ A + + A HRR AI S+ Sbjct: 102 ARFRALQARAKTSSDQNLKAATAESRREASDPSQL--TALHRRHAIASH 148
>VIT2_CHICK (P02845) Vitellogenin-2 precursor (Vitellogenin II) (Major| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP40] Length = 1850 Score = 30.8 bits (68), Expect = 3.4 Identities = 22/107 (20%), Positives = 50/107 (46%), Gaps = 2/107 (1%) Frame = -2 Query: 604 KDYKHAKRESSGKVAKSENADQEP--RMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQ 431 K ++ SS + +KS N+ + + SNS+ S + S+ +++++ S S + + Sbjct: 1159 KQARNKDASSSSRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSSRSSSSSSSSSSNSK 1218 Query: 430 DNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVKSSVAVPHNPSDK 290 ++ + S + ++ + SSS + + KSS + + S K Sbjct: 1219 SSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSSK 1265
>USP9Y_HUMAN (O00507) Probable ubiquitin carboxyl-terminal hydrolase FAF-Y (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-Y) (Ubiquitin-specific-processing protease FAF-Y) (Deubiquitinating enzyme FAF-Y) (Fat facets protein-related, Y-linked) (Ubiquitin-specif Length = 2555 Score = 30.8 bits (68), Expect = 3.4 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 4/89 (4%) Frame = -2 Query: 586 KRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESAR---AKAAALSPKLSPDVQDNNPR 416 +R +G S N P SN T +++ + SAR AKA L P+ PD QD P Sbjct: 2429 RRPYTGNPQYSYNNWSPPVQSNETANGYFLERSHSARMTLAKACELCPEEEPDDQD-APD 2487 Query: 415 KRHSLPITNGKNETSPRMQRS-SSQAQQN 332 + P +E +P S +SQ QQN Sbjct: 2488 EHEPSP-----SEDAPLYPHSPASQYQQN 2511
>DACT1_BRARE (Q6QZN6) Dapper homolog 1 (Frodo 1)| Length = 821 Score = 30.8 bits (68), Expect = 3.4 Identities = 19/60 (31%), Positives = 32/60 (53%) Frame = -1 Query: 542 SRTSHEQQHSIAKLHAVHRICKSKGGRSIPEVKPRRARQQPEEEAFFAHHKR*KRDISSH 363 +R+S ++ H + H + K K R+ +PR + P EEA+ H+R KR++ SH Sbjct: 635 ARSSAQRHHGHHRHHEAV-LAKPKYKRNDFHRRPRGLHEIPYEEAYRRAHRRQKREMLSH 693
>UBP8_HUMAN (P40818) Ubiquitin carboxyl-terminal hydrolase 8 (EC 3.1.2.15)| (Ubiquitin thioesterase 8) (Ubiquitin-specific processing protease 8) (Deubiquitinating enzyme 8) (hUBPy) Length = 1118 Score = 30.8 bits (68), Expect = 3.4 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%) Frame = +1 Query: 19 QYKSSRICIT-HKRNTTISQ---ITQPIRSTNKCTYMMKLLLFS 138 Q+KS+ C+T HK++ T ++ P+ ST+KCT L LFS Sbjct: 929 QFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFS 972
>ENAM_MOUSE (O55196) Enamelin precursor| Length = 1274 Score = 30.4 bits (67), Expect = 4.5 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 6/118 (5%) Frame = -2 Query: 619 TDNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSP--KL 446 ++ + +DY+ K + K D P S ++ +P T+S SP Sbjct: 219 SEEMFEDYEKPKEKDPPKPEDPPPDDPPPEASTNSTVPD-ANATQSIPEGGNDTSPIGNT 277 Query: 445 SPDVQ-DNNPRKRHSL---PITNGKNETSPRMQRSSSQAQQNVKSSVAVPHNPSDKRW 284 P NNP ++ + P N + P+ Q +Q N+ + P+ PS+++W Sbjct: 278 GPGPNAGNNPTVQNGVFPPPKVNVSGQGVPKSQIPWRPSQPNIYENYPYPNYPSERQW 335
>NEUM_SERCA (Q98987) Neuromodulin (Axonal membrane protein GAP-43)| (Growth-associated protein 43) (Fragment) Length = 241 Score = 30.4 bits (67), Expect = 4.5 Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 9/98 (9%) Frame = -2 Query: 607 SKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPD--- 437 SKD E G A ++ ++P +TP S + T +A A +PK S D Sbjct: 98 SKDSSAPAEEKKGDGA-ADTGSEQPAPQAATPAASSEEKTAAAAAPERESTPKASTDNSP 156 Query: 436 ------VQDNNPRKRHSLPITNGKNETSPRMQRSSSQA 341 QD K+ +P + T+P + ++++A Sbjct: 157 SLKADEAQDKEEPKQADVPAADTTATTTPAAEDATAKA 194
>YIHI_SHIFL (P0A8H7) UPF0241 protein yihI| Length = 169 Score = 30.4 bits (67), Expect = 4.5 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -2 Query: 562 AKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQ 431 +K +NA ++PR+ + TP+P + + + K + P LSP + Sbjct: 55 SKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAE 98
>YIHI_ECOLI (P0A8H6) UPF0241 protein yihI| Length = 169 Score = 30.4 bits (67), Expect = 4.5 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -2 Query: 562 AKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQ 431 +K +NA ++PR+ + TP+P + + + K + P LSP + Sbjct: 55 SKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAE 98
>YIHI_ECOL6 (Q8FBG9) UPF0241 protein yihI| Length = 169 Score = 30.4 bits (67), Expect = 4.5 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -2 Query: 562 AKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQ 431 +K +NA ++PR+ + TP+P + + + K + P LSP + Sbjct: 55 SKGQNAPKDPRIGSKTPIPLGVAEKVTKQHKPKSEKPMLSPQAE 98
>YIHI_ECO57 (Q8X8G9) UPF0241 protein yihI| Length = 168 Score = 30.4 bits (67), Expect = 4.5 Identities = 13/44 (29%), Positives = 25/44 (56%) Frame = -2 Query: 562 AKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQ 431 +K +NA ++PR+ + TP+P + + + K + P LSP + Sbjct: 54 SKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAE 97
>PI3K1_DICDI (P54673) Phosphatidylinositol 3-kinase 1 (EC 2.7.1.137)| (PI3-kinase) (PtdIns-3-kinase) (PI3K) Length = 1570 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/80 (23%), Positives = 31/80 (38%) Frame = -2 Query: 529 MSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQRSS 350 +S STP + T ++ + PK SP N +R PIT K +++ S Sbjct: 306 ISTSTPTTTTTTTTNTSTTNDITIKPKTSP---TKNNEERSQSPITTPKQPVEEIVKKVS 362 Query: 349 SQAQQNVKSSVAVPHNPSDK 290 + N + P+ K Sbjct: 363 TPKSNNTSKKTSSDTTPTGK 382
>RS6_MYCPN (P75543) 30S ribosomal protein S6| Length = 215 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 12/63 (19%) Frame = -2 Query: 433 QDNNPRKRHSLPITNGKNETSPRMQRSSS------------QAQQNVKSSVAVPHNPSDK 290 ++NNP + +P+T+G T PR+ R+ Q N S A P+ P K Sbjct: 121 RENNP-ENPDVPVTSGLASTQPRLSRTEKAQKPKEELWDVVQKMGNFDSVQANPYRPRFK 179 Query: 289 RWN 281 R+N Sbjct: 180 RFN 182
>BMPR2_HUMAN (Q13873) Bone morphogenetic protein receptor type-2 precursor (EC| 2.7.11.30) (Bone morphogenetic protein receptor type II) (BMP type II receptor) (BMPR-II) Length = 1038 Score = 30.0 bits (66), Expect = 5.8 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%) Frame = -2 Query: 625 SSTDNLSKDYKHAKRESSGKVAKSENADQ--EPRMSNSTPLPSYMQFTESARAKAAALSP 452 SS +NL + H+ ++ SG S + P + + FT++A +A + Sbjct: 680 SSDENLME---HSLKQFSGPDPLSSTSSSLLYPLIKLAVEATGQQDFTQTANGQACLIPD 736 Query: 451 KLSPDV-----QDNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVK 326 L + Q N P++ SLP+ N KN T + S+ + N+K Sbjct: 737 VLPTQIYPLPKQQNLPKRPTSLPL-NTKNSTKEPRLKFGSKHKSNLK 782
>US6NL_MOUSE (Q80XC3) USP6 N-terminal-like protein| Length = 819 Score = 30.0 bits (66), Expect = 5.8 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Frame = -2 Query: 457 SPKLSPDVQDNNPRKRHS-LPITNGKNETSPR----MQRSSSQAQQNVKSSVAVPHNPS 296 SPK S +D +PRK H P+ + +N T R ++S + +N+K PS Sbjct: 394 SPKTSSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPS 452
>MPP8_HUMAN (Q99549) M-phase phosphoprotein 8| Length = 860 Score = 30.0 bits (66), Expect = 5.8 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -2 Query: 622 STDNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESAR--AKAAALSPK 449 STD+ +D + + ES K K ++D+E + P ++ + R L+P+ Sbjct: 400 STDSAEEDKETKRNESKEKYQKRHDSDKEEKGRKE---PKGLKTLKEIRNAFDLFKLTPE 456 Query: 448 LSPDVQDNNPRKRHSLPI 395 DV +NN RKR +P+ Sbjct: 457 EKNDVSENN-RKREEIPL 473
>WIS1_SCHPO (P33886) Protein kinase wis1 (EC 2.7.12.2) (Protein kinase sty2)| Length = 605 Score = 29.6 bits (65), Expect = 7.6 Identities = 17/66 (25%), Positives = 31/66 (46%) Frame = -2 Query: 577 SSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLP 398 SSG S+ + + + PLP + R+ ++ L+ D++D + + R SLP Sbjct: 60 SSGSDNDSKVSSPSREIPSDPPLPRAVPTVRLGRSTSSRSRNSLNLDMKDPSEKPRRSLP 119 Query: 397 ITNGKN 380 G+N Sbjct: 120 TAAGQN 125
>ENDR_PAEPO (P27871) Probable HTH-type transcriptional regulator endR| Length = 340 Score = 29.6 bits (65), Expect = 7.6 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Frame = +3 Query: 45 YTQKKYHYQSNNTTNKINQQM----YIYDEAAALLHQ 143 + QK+Y+Y S NT KI Q + YI +E A L Q Sbjct: 22 FLQKRYNYMSENTKKKIEQAIEDLSYIPNEVARSLKQ 58
>USP9X_HUMAN (Q93008) Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein related, X-linked) (Ubiquitin-specif Length = 2547 Score = 29.6 bits (65), Expect = 7.6 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = -2 Query: 586 KRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESAR---AKAAALSPKLSPDVQDNNPR 416 +R +G + N P SN T +++ + SAR AKA L P+ PD QD P Sbjct: 2421 RRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDQD-APD 2479 Query: 415 KRHSLPITNGKNETSPRMQRS-SSQAQQN 332 + S P E +P S SQ QQN Sbjct: 2480 EHESPP-----PEDAPLYPHSPGSQYQQN 2503
>DDX51_BRARE (Q6DRI7) ATP-dependent RNA helicase DDX51 (EC 3.6.1.-) (DEAD box| protein 51) Length = 652 Score = 29.6 bits (65), Expect = 7.6 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Frame = -2 Query: 616 DNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPK-LSP 440 D K KH +E+ GK+ KSE+ + N+ P + + + +LS + + Sbjct: 56 DKEHKKRKHKLQETKGKIKKSES------VQNTDPTEEADSSVKKKKKRKKSLSTEDVIV 109 Query: 439 DVQDNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVKSS 320 +++N S+ IT G +SP +Q + +A++ SS Sbjct: 110 KIEENESENEKSVDIT-GPTPSSP-VQFKAEKAEELTSSS 147
>YK01_YEAST (P36117) Hypothetical 102.5 kDa protein in YPT52-DBP7 intergenic| region Length = 915 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/51 (35%), Positives = 28/51 (54%) Frame = -2 Query: 472 KAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVKSS 320 K SP LSP+VQ N R LP+ + E S + +S + +++N +SS Sbjct: 564 KEVLSSPVLSPNVQKMNIRIPSDLPVVRNRAE-SVKKSKSDNTSKKNDQSS 613
>USP9X_MOUSE (P70398) Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC| 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X-linked) (Ubiquitin-specif Length = 2559 Score = 29.6 bits (65), Expect = 7.6 Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = -2 Query: 586 KRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESAR---AKAAALSPKLSPDVQDNNPR 416 +R +G + N P SN T +++ + SAR AKA L P+ PD QD P Sbjct: 2428 RRPYTGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEEEPDDQD-APD 2486 Query: 415 KRHSLPITNGKNETSPRMQRS-SSQAQQN 332 + S P E +P S SQ QQN Sbjct: 2487 EHESPP-----PEDAPLYPHSPGSQYQQN 2510
>GLGB_DEIRA (Q9RTB7) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 705 Score = 29.6 bits (65), Expect = 7.6 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Frame = -1 Query: 611 PVKGL*ACEE---------RELRQGCQV*KR*SRTSHEQQHSIAKLHAVHRICKSKGGRS 459 PVKGL + +E R+ Q QV + +EQQ +A+ A +GGRS Sbjct: 629 PVKGLVSRQELTPELREVARQSAQAVQVERAADPRPNEQQRLVAETPA------HEGGRS 682 Query: 458 IPEVKPRRARQQPEEE 411 P A Q+P++E Sbjct: 683 APADAAESAEQKPDDE 698
>SUUR_DROME (Q9VTE2) Protein suppressor of underreplication| Length = 962 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = -2 Query: 520 STPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQRSSSQA 341 STP PS R A ++PK P + N +KR P+ G+ T MQR + A Sbjct: 437 STPPPS--------RTTTAIVTPKTEPTARRKNLKKRTVSPVDVGRPATR-GMQRLTRSA 487 Query: 340 QQNVKS 323 + + S Sbjct: 488 ETKINS 493
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 29.6 bits (65), Expect = 7.6 Identities = 29/105 (27%), Positives = 44/105 (41%) Frame = -2 Query: 622 STDNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLS 443 ST + S ++ +SG A S +A S+S PS + S + AA+ SP S Sbjct: 425 STSDSSALGSTSESSASGSSAVSSSASGSSAASSS---PSSSAASSSPSSSAASSSPSSS 481 Query: 442 PDVQDNNPRKRHSLPITNGKNETSPRMQRSSSQAQQNVKSSVAVP 308 S P ++ + +SP SSS A + SS + P Sbjct: 482 A---------ASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAP 517
>GGH_MOUSE (Q9Z0L8) Gamma-glutamyl hydrolase precursor (EC 3.4.19.9)| (Gamma-Glu-x carboxypeptidase) (Conjugase) (GH) (Folylpolyglutamate hydrolase) (FGPH) Length = 317 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/60 (26%), Positives = 27/60 (45%) Frame = -2 Query: 622 STDNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESARAKAAALSPKLS 443 S+ +S+ Y H V E + ++ N SY+++ ESA A+ + P LS Sbjct: 19 SSPGMSRPYNHGSERPIIGVVMQECFGKMAKLGNYYIAASYVKYIESAGARVVPIRPDLS 78
>LAS17_YEAST (Q12446) Proline-rich protein LAS17| Length = 633 Score = 29.3 bits (64), Expect = 10.0 Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 10/98 (10%) Frame = -2 Query: 595 KHAKRESSGKVAKSENADQEPRMS--NSTPLPSYMQFTESARAKAAALSPKLSPDVQDNN 422 KH A++ ++DQ S NST T SA A P SP+V+ Sbjct: 181 KHKAPPPPPPTAETFDSDQTSSFSDINST--------TASAPTTPAPALPPASPEVRKEE 232 Query: 421 PRKRHSL--------PITNGKNETSPRMQRSSSQAQQN 332 +HSL P+ + SP + SQ Q N Sbjct: 233 THPKHSLPPLPNQFAPLPDPPQHNSPPQNNAPSQPQSN 270
>HOS4_YEAST (P40480) Protein HOS4| Length = 1083 Score = 29.3 bits (64), Expect = 10.0 Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 12/118 (10%) Frame = -2 Query: 616 DNLSKDYKHAKRESSGKVAKSENADQEPRMSNSTPLPSYMQFTESA-RAKAAALSPKLSP 440 + +SK + +++GK + E +E + S+ T S +A L+ K S Sbjct: 30 EKISKQETSEEEDTAGKHEQRETLSEEVSDKFPENVASFRSQTTSVHQATQNNLNAKESE 89 Query: 439 DVQDNNPRKRHS-----------LPITNGKNETSPRMQRSSSQAQQNVKSSVAVPHNP 299 D+ N H +P TN K + R + SSS + NV++ H P Sbjct: 90 DLAHKNDASSHEGEVNGDSRPDDVPETNEKISQAIRAKISSSSSSPNVRNVDIQNHQP 147
>VG51_SHV21 (Q01036) Gene 51 glycoprotein| Length = 269 Score = 29.3 bits (64), Expect = 10.0 Identities = 17/70 (24%), Positives = 36/70 (51%) Frame = -2 Query: 529 MSNSTPLPSYMQFTESARAKAAALSPKLSPDVQDNNPRKRHSLPITNGKNETSPRMQRSS 350 M N+T SY Q T ++ ++ +P + ++ P K S K+++S + +++ Sbjct: 72 MHNATSNTSYSQTTPYSQTSLSSSVLISTPQMLNSTPNKPLSSTKLTPKSQSSSQSTKTT 131 Query: 349 SQAQQNVKSS 320 QA +N+ +S Sbjct: 132 KQASKNLTTS 141 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,430,835 Number of Sequences: 219361 Number of extensions: 1858605 Number of successful extensions: 5654 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 5388 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5649 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5767334219 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
