ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd20i15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor ... 112 6e-25
2ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor ... 105 8e-23
3ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor ... 103 5e-22
4ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor ... 90 4e-18
5NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ... 39 0.009
6FRAH_ANASP (P46017) Protein fraH 37 0.033
7DMA1_SCHPO (Q10322) Protein dma1 32 1.8
8PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propio... 30 5.3
9Y1984_CAUCR (Q9A6U9) Hypothetical UPF0169 lipoprotein CC1984 pre... 29 9.0
10YOT2_CAEEL (P34648) Hypothetical protein ZK632.2 29 9.0

>ABA2_NICPL (Q40412) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 663

 Score =  112 bits (281), Expect = 6e-25
 Identities = 54/86 (62%), Positives = 63/86 (73%)
 Frame = -1

Query: 539 QVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 360
           QVSE+HA I+ K   F++TDL SEHGTW  DNEGRRYR  PNFP RFHPSD IEFGSDKK
Sbjct: 578 QVSEMHARISYKGGAFFVTDLRSEHGTWITDNEGRRYRASPNFPTRFHPSDIIEFGSDKK 637

Query: 359 AMFRVKVLSALPYDSARGGGEVLQAA 282
           A FRVKV+   P  +A+   + + AA
Sbjct: 638 AAFRVKVMKFPPKTAAKEERQAVGAA 663



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>ABA2_LYCES (P93236) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90)
          Length = 669

 Score =  105 bits (263), Expect = 8e-23
 Identities = 49/68 (72%), Positives = 55/68 (80%)
 Frame = -1

Query: 539 QVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 360
           QVSE+HA I+CK+  F++TDL SEHGTW  DNEGRRYR  PNFP RFHPSD IEFGSD K
Sbjct: 584 QVSEMHARISCKDGAFFVTDLRSEHGTWVTDNEGRRYRTSPNFPTRFHPSDVIEFGSD-K 642

Query: 359 AMFRVKVL 336
           A FRVK +
Sbjct: 643 AAFRVKAM 650



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>ABA2_PRUAR (O81360) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (PA-ZE)
          Length = 661

 Score =  103 bits (256), Expect = 5e-22
 Identities = 54/86 (62%), Positives = 63/86 (73%)
 Frame = -1

Query: 539 QVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 360
           QVSE+HA I+ K+  FYLTDL SEHGTW  D EG+RYR+PPNFP RF PSDAIE GS K 
Sbjct: 579 QVSEMHARISYKDGAFYLTDLRSEHGTWIADIEGKRYRVPPNFPARFRPSDAIEIGSQKV 638

Query: 359 AMFRVKVLSALPYDSARGGGEVLQAA 282
           A FRVKV+ + P    + G  +LQAA
Sbjct: 639 A-FRVKVMKSSPGSVEKEG--ILQAA 661



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>ABA2_CAPAN (Q96375) Zeaxanthin epoxidase, chloroplast precursor (EC|
           1.14.13.90) (Xanthophyll epoxidase) (Beta-cyclohexenyl
           epoxidase)
          Length = 660

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 45/86 (52%), Positives = 57/86 (66%)
 Frame = -1

Query: 539 QVSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 360
           QVS++HA I+     F  T   S+HGTWF DNEGRRYR+ PNFP+RFH SD I FGSD K
Sbjct: 576 QVSDMHARISYNGGAFLGTAFRSDHGTWFIDNEGRRYRVSPNFPMRFHSSDVIVFGSD-K 634

Query: 359 AMFRVKVLSALPYDSARGGGEVLQAA 282
           A FR+K +   P  +A+   + + AA
Sbjct: 635 AAFRIKAMKFAPKTAAKEDRQAVGAA 660



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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 39.3 bits (90), Expect = 0.009
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -1

Query: 497 GFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKK 360
           GFYL DLGS HGT+ N     + R+PP    R H    + FG   +
Sbjct: 230 GFYLYDLGSTHGTFLN-----KTRIPPRTYCRVHVGHVVRFGGSTR 270



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>FRAH_ANASP (P46017) Protein fraH|
          Length = 289

 Score = 37.4 bits (85), Expect = 0.033
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
 Frame = -1

Query: 536 VSEIHATITCKNKGFYLTDLGSEHGTWFND---NEGRRYRLPPNFPVRFHPSDAIEF 375
           VS +HA I  +    Y+ D+GS +GT+ N+     G R+RL P   +     D + F
Sbjct: 228 VSRVHADIRLEGDAHYIEDVGSSNGTYINNLPLLPGNRHRLRPGDRISLGKGDLVTF 284



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>DMA1_SCHPO (Q10322) Protein dma1|
          Length = 267

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -1

Query: 536 VSEIHATITCKNKGFYLTDLGSEHGTWFNDNEGRRYRLPP----NFPVRFHPSDAIEFGS 369
           VS  HA I  +N  +Y+ D+GS  GT+ N       RL P    + P     +D ++ G+
Sbjct: 84  VSRRHAQIFYENNTWYIQDMGSSSGTFLN-----HVRLSPPSKTSKPYPISNNDILQLGA 138

Query: 368 D 366
           D
Sbjct: 139 D 139



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>PRPE_SALTY (P55912) Propionate--CoA ligase (EC 6.2.1.17) (Propionyl-CoA|
           synthetase)
          Length = 628

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = +2

Query: 254 DKGWLKSPLMLPAELLPRLSPSRMGAR*APSPGTWPSCLNQTRWHPKGENEPGSLEVTG 430
           + GW   P+M  A  L    PSR+G+   P  G     LN+    P G NE G L + G
Sbjct: 390 ESGW---PIMALARALDD-RPSRLGSPGVPMYGYNVQLLNEVTGEPCGINEKGMLVIEG 444



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>Y1984_CAUCR (Q9A6U9) Hypothetical UPF0169 lipoprotein CC1984 precursor|
          Length = 305

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
 Frame = +2

Query: 194 FLGGDAVSAVFLLKNATVAGDKGWLKSPLML----PAELLPRLSPSRMGAR*APSPGTWP 361
           F G  AV+   +L  A+VAG  G  K P ++    P ELL      R+        G W 
Sbjct: 5   FQGRPAVTIAAVLVAASVAGCAGKAKKPTLVYEERPVELLYSTGADRL------DRGNWN 58

Query: 362 SCLNQ----TRWHPKGENEPGSLEVTGSAY 439
             ++      R HP  E    S+ +TG A+
Sbjct: 59  EAVDYFREVERQHPYSEWSRRSILMTGYAH 88



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>YOT2_CAEEL (P34648) Hypothetical protein ZK632.2|
          Length = 710

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = -1

Query: 500 KGFYLTDLGSEHGTWFNDNEGRRYRLPPNFPVRFHPSDAIEFGSDKKAM 354
           KG+++ +LGS HG+  N     + RLPP   +R       +FG   + +
Sbjct: 145 KGWHIFELGSTHGSRMN-----KKRLPPKQYIRTRVGFIFQFGESTRIL 188


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,382,830
Number of Sequences: 219361
Number of extensions: 1880299
Number of successful extensions: 4567
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4566
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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